F383020

General Info

Members Datasets Scaffolds Average Seq Length
279 143 558 950

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10000186|Ga0114129_1000018639
Length 997
Sequence MSSHQTAGITPLDESKGSAQSQMTSGAPGSFPERHIGPDAADRDEMVRSIGVRSLDDLIDQTVPPDIRSTAPLELAPADSEHEYLRRLRIIASRNIVNRSYVGMGYYDCVTPSVILRNMFENPGWYTPYTPYQAEIAQGRLESLLNFQTVVKDLTAMDIATASLLDEATAAAEAMTMFHRLQAKKAPAGQESLFLVSDRCFPQTLAVLRGRAEPLRIRLEIAAPSDFTDDALSQAFGMLLQYPDDRGEIADLRPTTERAHQAGVLVAVATDLLALTLITPPGEMGADAVVGNSQRFGVPLGYGGPHAAFFATRDAFVRQAPGRIIGVSIDAKGRRAYRMALQTREQHIRREKATSNICTAQALLANIAAMYAVYHGPKGLRAIAERVHGLTTELEEALGGLGYRQTNQAYFDTLRVEGADVSRIRRAAEGRGINFRYTGDAIGISLDETVTGTDVRGIVAVFADEGQTQDVRLHTSPKRGQTPHVGLPTLHKLPPALTRTSVYLTHPVFNTHHSETQMMRYIRSLERKDVGLDRSMIPLGSCTMKLNAASEMIPVSWPEFARVHPFAPVDQTGGYAQIFRELEDALCRITGFSAVSLQPNSGAQGEFAGLMTIRAYLRDHSQAQRNVVLIPSSAHGTNPASATMAGLKVVVVACDANGNVDLGDLRARAEQYRDSLAALMVTYPSTHGVFEEDIRDICAVVHEHGGQVYMDGANMNAQVGLTTPAAIGADVCHLNLHKTFAIPHGGGGPGMGPIAVAKHLSPYLPTHPVIAVGGSKGIPAVSAAPWGSASILLISYGYIRMLGAAGMTDATRYAILNANYVKARLQGHYDVLYANHNGRVAHEMIFDLRPFKHGAGPSVDEQDVAKRLMDYGFHAPTVSFPVAGTMMIEPTESESKDELDRFCDALIAIRDEIQAVVDGRADARDNVLKNAPHTAEEVSADAWSHPYSREQAAYPLLFVRSEKFWPSVARIDNPYGDRNLMCACPPIESYAPDQIKS

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
35 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
36 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
37 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
76 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
77 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
78 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
88 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
89 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
90 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
91 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
96 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
97 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
98 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
99 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
100 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
116 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
119 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
134 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
135 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
136 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
137 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
138 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
139 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
140 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
141 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
142 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
143 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.72
Nodule 0
Rhizoplane 5.02
Rhizosphere 94.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10000186 3300009147 Bacteria 69381
2 JGI25406J46586_10000932 3300003203 Bacteria 13775
3 Ga0065712_10068093 3300005290 Bacteria 15009
4 Ga0065707_10001241 3300005295 Bacteria 9754
5 Ga0065707_10090478 3300005295 Bacteria 4132
6 Ga0070683_100000700 3300005329 Bacteria 24378
7 Ga0070670_100003765 3300005331 Bacteria 12627
8 Ga0070670_100004042 3300005331 Bacteria 12247
9 Ga0070670_100028022 3300005331 Bacteria 4848
10 Ga0068869_100018833 3300005334 Bacteria 4707
11 Ga0068868_100004639 3300005338 Bacteria 9646
12 Ga0070689_100012340 3300005340 Bacteria 6153
13 Ga0070669_100001163 3300005353 Bacteria 19202
14 Ga0070669_100007082 3300005353 Bacteria 8054
15 Ga0070675_100002889 3300005354 Bacteria 12950
16 Ga0070675_100033351 3300005354 Bacteria 4174
17 Ga0070674_100000318 3300005356 Bacteria 23713
18 Ga0070673_100012762 3300005364 Bacteria 5780
19 Ga0070714_100000017 3300005435 Bacteria 186147
20 Ga0070713_100042402 3300005436 Bacteria 3713
21 Ga0070707_100036854 3300005468 Bacteria 4668
22 Ga0070699_100019842 3300005518 Bacteria 5794
23 Ga0070684_100000084 3300005535 Bacteria 61595
24 Ga0070686_100017107 3300005544 Bacteria 4232
25 Ga0070695_100017493 3300005545 Bacteria 4349
26 Ga0070664_100000177 3300005564 Bacteria 44970
27 Ga0070664_100000547 3300005564 Bacteria 28718
28 Ga0070664_100012172 3300005564 Bacteria 6992
29 Ga0068857_100013574 3300005577 Bacteria 7096
30 Ga0068859_100008941 3300005617 Bacteria 10116
31 Ga0068861_100008382 3300005719 Bacteria 7113
32 Ga0068851_10000274 3300005834 Bacteria 23828
33 Ga0068870_10000642 3300005840 Bacteria 13325
34 Ga0068863_100004431 3300005841 Bacteria 13844
35 Ga0068858_100007243 3300005842 Bacteria 10750
36 Ga0068860_100002485 3300005843 Bacteria 19341
37 Ga0068860_100052520 3300005843 Bacteria 3877
38 Ga0081539_10000056 3300005985 Bacteria 256522
39 Ga0081539_10000722 3300005985 Bacteria 66164
40 Ga0081539_10003038 3300005985 Bacteria 21740
41 Ga0075364_10001948 3300006051 Bacteria 11499
42 Ga0097621_100000312 3300006237 Bacteria 32930
43 Ga0068871_100000880 3300006358 Bacteria 20009
44 Ga0068871_100025012 3300006358 Bacteria 4639
45 Ga0075428_100000582 3300006844 Bacteria 37313
46 Ga0075428_100005634 3300006844 Bacteria 13914
47 Ga0075428_100008527 3300006844 Bacteria 11369
48 Ga0075428_100019909 3300006844 Bacteria 7430
49 Ga0075428_100020871 3300006844 Bacteria 7253
50 Ga0075428_100030306 3300006844 Bacteria 5985
51 Ga0075430_100000982 3300006846 Bacteria 22489
52 Ga0075430_100002594 3300006846 Bacteria 15081
53 Ga0075430_100004286 3300006846 Bacteria 12044
54 Ga0075431_100001675 3300006847 Bacteria 20787
55 Ga0075431_100003520 3300006847 Bacteria 15170
56 Ga0075431_100028215 3300006847 Bacteria 5764
57 Ga0075431_100033070 3300006847 Bacteria 5329
58 Ga0075431_100058029 3300006847 Bacteria 3992
59 Ga0075433_10000535 3300006852 Bacteria 24966
60 Ga0075433_10023782 3300006852 Bacteria 5160
61 Ga0075434_100001076 3300006871 Bacteria 22339
62 Ga0075434_100002259 3300006871 Bacteria 16854
63 Ga0075434_100011084 3300006871 Bacteria 8483
64 Ga0075434_100025361 3300006871 Bacteria 5800
65 Ga0075429_100001185 3300006880 Bacteria 21068
66 Ga0075429_100003493 3300006880 Bacteria 13406
67 Ga0075429_100007080 3300006880 Bacteria 9735
68 Ga0075429_100009541 3300006880 Bacteria 8418
69 Ga0075429_100032970 3300006880 Bacteria 4501
70 Ga0097620_100008941 3300006931 Bacteria 10116
71 Ga0111539_10000011 3300009094 Bacteria 356900
72 Ga0111539_10000803 3300009094 Bacteria 40840
73 Ga0111539_10001118 3300009094 Bacteria 35458
74 Ga0111539_10001539 3300009094 Bacteria 30721
75 Ga0111539_10004333 3300009094 Bacteria 18572
76 Ga0111539_10013846 3300009094 Bacteria 10083
77 Ga0111539_10019010 3300009094 Bacteria 8494
78 Ga0111539_10023319 3300009094 Bacteria 7603
79 Ga0111539_10029383 3300009094 Bacteria 6695
80 Ga0111539_10036449 3300009094 Bacteria 5947
81 Ga0111539_10043340 3300009094 Bacteria 5394
82 Ga0114129_10001097 3300009147 Bacteria 35568
83 Ga0114129_10002528 3300009147 Bacteria 25398
84 Ga0114129_10010160 3300009147 Bacteria 13421
85 Ga0114129_10017842 3300009147 Bacteria 10106
86 Ga0114129_10018063 3300009147 Bacteria 10046
87 Ga0114129_10023796 3300009147 Bacteria 8683
88 Ga0114129_10024901 3300009147 Bacteria 8485
89 Ga0114129_10026486 3300009147 Bacteria 8210
90 Ga0114129_10032419 3300009147 Bacteria 7384
91 Ga0114129_10046690 3300009147 Bacteria 6086
92 Ga0114129_10051113 3300009147 Bacteria 5803
93 Ga0114129_10088637 3300009147 Bacteria 4289
94 Ga0105248_10007672 3300009177 Bacteria 11857
95 Ga0105248_10019160 3300009177 Bacteria 7570
96 Ga0105249_10003651 3300009553 Bacteria 13290
97 Ga0105249_10007847 3300009553 Bacteria 9295
98 Ga0105249_10022243 3300009553 Bacteria 5679
99 Ga0105249_10055825 3300009553 Bacteria 3615
100 Ga0157378_10006306 3300013297 Bacteria 10391
101 Ga0163162_10022323 3300013306 Bacteria 6239
102 Ga0157377_10002453 3300014745 Bacteria 8202
103 Ga0207697_10000291 3300025315 Bacteria 27983
104 Ga0207656_10000645 3300025321 Bacteria 11397
105 Ga0207682_10001824 3300025893 Bacteria 9705
106 Ga0207688_10000459 3300025901 Bacteria 19415
107 Ga0207645_10004213 3300025907 Bacteria 10676
108 Ga0207643_10000653 3300025908 Bacteria 21644
109 Ga0207646_10041996 3300025922 Bacteria 4109
110 Ga0207681_10018374 3300025923 Bacteria 4404
111 Ga0207650_10022194 3300025925 Bacteria 4493
112 Ga0207659_10002625 3300025926 Bacteria 10704
113 Ga0207659_10022757 3300025926 Bacteria 4175
114 Ga0207659_10034672 3300025926 Bacteria 3482
115 Ga0207664_10000016 3300025929 Bacteria 245001
116 Ga0207706_10003389 3300025933 Bacteria 15239
117 Ga0207706_10009056 3300025933 Bacteria 9157
118 Ga0207670_10011586 3300025936 Bacteria 5125
119 Ga0207670_10011605 3300025936 Bacteria 5122
120 Ga0207669_10000521 3300025937 Bacteria 16732
121 Ga0207691_10002859 3300025940 Bacteria 16811
122 Ga0207691_10008412 3300025940 Bacteria 9914
123 Ga0207691_10008609 3300025940 Bacteria 9789
124 Ga0207689_10002288 3300025942 Bacteria 17931
125 Ga0207689_10038093 3300025942 Bacteria 3983
126 Ga0207661_10003401 3300025944 Bacteria 11045
127 Ga0207679_10002063 3300025945 Bacteria 12458
128 Ga0207677_10004001 3300026023 Bacteria 7863
129 Ga0207648_10013428 3300026089 Bacteria 7622
130 Ga0207648_10022671 3300026089 Bacteria 5636
131 Ga0207674_10020884 3300026116 Bacteria 7066
132 Ga0207675_100006903 3300026118 Bacteria 10751
133 Ga0207428_10000212 3300027907 Bacteria 80663
134 Ga0207428_10000813 3300027907 Bacteria 35311
135 Ga0207428_10002197 3300027907 Bacteria 19610
136 Ga0207428_10006240 3300027907 Bacteria 11015
137 Ga0207428_10012947 3300027907 Bacteria 7311
138 Ga0207428_10015333 3300027907 Bacteria 6631
139 Ga0207428_10019818 3300027907 Bacteria 5729
140 Ga0268264_10014025 3300028381 Bacteria 6588
141 Ga0268264_10019823 3300028381 Bacteria 5495
142 Ga0307408_100005965 3300031548 Bacteria 8113
143 Ga0307408_100029722 3300031548 Bacteria 3789
144 Ga0307413_10017045 3300031824 Bacteria 3774
145 Ga0307410_10011703 3300031852 Bacteria 5033
146 Ga0307416_100014592 3300032002 Bacteria 5393
147 Ga0373938_0000602 3300034957 Bacteria 5809
148 Ga0373929_0000608 3300035085 Bacteria 6923
149 Ga0373951_0003261 3300035091 Bacteria 3969
150 Ga0373943_0021510 3300035170 Bacteria 2980
151 Ga0373937_0014031 3300036401 Bacteria 7065
152 Ga0373925_0010155 3300037068 Bacteria 6835
153 Ga0453684_0014892 3300044712 Bacteria 12370
154 Ga0453684_0078535 3300044712 Bacteria 4130
155 Ga0451576_0026335 3300045051 Bacteria 6256
156 Ga0495592_0039168 3300046454 Bacteria 3562
157 Ga0495629_0004391 3300046459 Bacteria 10562
158 Ga0495638_0003000 3300046460 Bacteria 13481
159 Ga0495582_0007230 3300046473 Bacteria 6156
160 Ga0495643_0023910 3300046522 Bacteria 3468
161 Ga0495647_0004809 3300046681 Bacteria 4407
162 Ga0495658_0012634 3300046683 Bacteria 4283
163 Ga0495593_0008090 3300047673 Bacteria 6118
164 Ga0496102_0091502 3300048905 Bacteria 2816
165 Ga0496105_0010856 3300048908 Bacteria 7172
166 Ga0496108_0000350 3300048911 Bacteria 38965
167 Ga0496108_0020691 3300048911 Bacteria 5407
168 Ga0496109_0000257 3300048912 Bacteria 51399
169 Ga0496109_0028004 3300048912 Bacteria 5037
170 Ga0496110_0000390 3300048913 Bacteria 29574
171 Ga0496110_0010881 3300048913 Bacteria 7417
172 Ga0496111_0006755 3300048914 Bacteria 7475
173 Ga0496112_0002169 3300048915 Bacteria 15596
174 Ga0496112_0067343 3300048915 Bacteria 3534
175 Ga0496114_0007511 3300048917 Bacteria 8621
176 Ga0496114_0018343 3300048917 Bacteria 5658
177 Ga0496115_0019594 3300048918 Bacteria 5208
178 Ga0501031_0000663 3300049568 Bacteria 20435
179 Ga0501031_0034598 3300049568 Bacteria 3297
180 Ga0501032_0008240 3300049569 Bacteria 7599
181 Ga0501033_0008789 3300049570 Bacteria 7807
182 Ga0501033_0009654 3300049570 Bacteria 7422
183 Ga0501034_0021868 3300049571 Bacteria 6516
184 Ga0501034_0075185 3300049571 Bacteria 3386
185 Ga0501034_0095048 3300049571 Bacteria 2977
186 Ga0501034_0100527 3300049571 Bacteria 2886
187 Ga0501036_0000589 3300049572 Bacteria 26321
188 Ga0501036_0013349 3300049572 Bacteria 6823
189 Ga0501036_0013605 3300049572 Bacteria 6763
190 Ga0501036_0016793 3300049572 Bacteria 6115
191 Ga0501037_0003434 3300049573 Bacteria 11516
192 Ga0501038_0000258 3300049574 Bacteria 44669
193 Ga0501038_0004194 3300049574 Bacteria 13389
194 Ga0501038_0040035 3300049574 Bacteria 4096
195 Ga0501039_0006532 3300049575 Bacteria 8855
196 Ga0501040_0003167 3300049576 Bacteria 10659
197 Ga0501040_0033476 3300049576 Bacteria 3481
198 Ga0501041_0017059 3300049577 Bacteria 4321
199 Ga0501042_0010749 3300049578 Bacteria 6154
200 Ga0501043_0003353 3300049579 Bacteria 13196
201 Ga0501043_0008646 3300049579 Bacteria 8024
202 Ga0501043_0012579 3300049579 Bacteria 6617
203 Ga0501046_0008051 3300049580 Bacteria 9212
204 Ga0501046_0017415 3300049580 Bacteria 5997
205 Ga0501046_0033173 3300049580 Bacteria 4175
206 Ga0501047_0000525 3300049581 Bacteria 41419
207 Ga0501047_0004623 3300049581 Bacteria 12952
208 Ga0501047_0019213 3300049581 Bacteria 6555
209 Ga0501048_0001156 3300049582 Bacteria 19854
210 Ga0501067_0001866 3300049583 Bacteria 11571
211 Ga0501069_0001383 3300049585 Bacteria 11914
212 Ga0501069_0018697 3300049585 Bacteria 3742
213 Ga0501070_0006154 3300049586 Bacteria 10232
214 Ga0501071_0002469 3300049587 Bacteria 11234
215 Ga0501071_0002624 3300049587 Bacteria 10997
216 Ga0501071_0010061 3300049587 Bacteria 6322
217 Ga0501073_0005978 3300049589 Bacteria 9079
218 Ga0501073_0018124 3300049589 Bacteria 5089
219 Ga0501073_0031054 3300049589 Bacteria 3812
220 Ga0501080_0002558 3300049742 Bacteria 15922
221 Ga0501080_0002837 3300049742 Bacteria 15227
222 Ga0501080_0026794 3300049742 Bacteria 5357
223 Ga0501081_0043452 3300049743 Bacteria 3083
224 Ga0501083_0001323 3300049744 Bacteria 16798
225 Ga0501035_0008650 3300049822 Bacteria 9476
226 Ga0501035_0017522 3300049822 Bacteria 6608
227 Ga0501044_0014724 3300049823 Bacteria 8432
228 Ga0501045_0008157 3300049824 Bacteria 7296
229 Ga0501045_0022421 3300049824 Bacteria 4522
230 nmdc:mga00v17_13712_c1 3300050491 Bacteria 4505
231 nmdc:mga05p37_17792_c1 3300050507 Bacteria 8577
232 nmdc:mga05p37_19862_c1 3300050507 Bacteria 8129
233 nmdc:mga05p37_2040_c1 3300050507 Bacteria 23571
234 nmdc:mga05p37_369_c2 3300050507 Bacteria 27862
235 nmdc:mga05p37_731_c1 3300050507 Bacteria 27405
236 nmdc:mga09592_32523_c1 3300050508 Bacteria 4349
237 nmdc:mga09592_3277_c1 3300050508 Bacteria 13113
238 nmdc:mga09592_38325_c1 3300050508 Bacteria 4023
239 nmdc:mga09592_51177_c1 3300050508 Bacteria 3484
240 nmdc:mga09592_8114_c1 3300050508 Bacteria 8538
241 nmdc:mga0qj67_2042_c1 3300050509 Bacteria 14402
242 nmdc:mga06r32_1853_c1 3300050510 Bacteria 18806
243 nmdc:mga06r32_22867_c1 3300050510 Bacteria 5782
244 nmdc:mga06r32_24706_c1 3300050510 Bacteria 5581
245 nmdc:mga06r32_6002_c2 3300050510 Bacteria 5410
246 nmdc:mga08y16_1262_c1 3300050511 Bacteria 25130
247 nmdc:mga08y16_12_c1 3300050511 Bacteria 438455
248 nmdc:mga08y16_15823_c1 3300050511 Bacteria 7931
249 nmdc:mga08y16_1840_c1 3300050511 Bacteria 21512
250 nmdc:mga08y16_18622_c1 3300050511 Bacteria 7314
251 nmdc:mga08y16_20371_c1 3300050511 Bacteria 7000
252 nmdc:mga08y16_40785_c1 3300050511 Bacteria 4864
253 nmdc:mga08y16_66178_c1 3300050511 Bacteria 3772
254 nmdc:mga0n895_335_c1 3300050512 Bacteria 31397
255 nmdc:mga0n895_8857_c1 3300050512 Bacteria 8759
256 nmdc:mga0rr50_29879_c1 3300050513 Bacteria 3850
257 nmdc:mga0rr50_35851_c1 3300050513 Bacteria 3567
258 nmdc:mga08x19_3605_c1 3300050514 Bacteria 9222
259 nmdc:mga0a205_1172_c1 3300050515 Bacteria 21855
260 nmdc:mga0a205_2832_c2 3300050515 Bacteria 13358
261 nmdc:mga0a205_531_c1 3300050515 Bacteria 30025
262 nmdc:mga0a205_6425_c1 3300050515 Bacteria 9582
263 nmdc:mga0a205_72238_c1 3300050515 Bacteria 3333
264 Ga0495619_0000902 3300053085 Bacteria 19441
265 Ga0501084_0004893 3300054114 Bacteria 10946
266 Ga0501084_0011428 3300054114 Bacteria 7350
267 Ga0501084_0014722 3300054114 Bacteria 6488
268 Ga0501084_0030638 3300054114 Bacteria 4498
269 Ga0590071_000946 3300059421 Bacteria 8036
270 Ga0590077_000746 3300059426 Bacteria 8537
271 Ga0501082_0000994 3300060353 Bacteria 25035
272 Ga0501082_0006669 3300060353 Bacteria 9990
273 Ga0501082_0013021 3300060353 Bacteria 7149
274 Ga0501082_0018629 3300060353 Bacteria 5983
275 Ga0501082_0024856 3300060353 Bacteria 5162
276 Ga0501082_0077196 3300060353 Bacteria 2872
277 Ga0530510_0004223 3300061734 Bacteria 9935
278 2894776454 2894772417 Bacteria 5305674
279 2910248581 2910245624 Bacteria 6935613
280 Ga0114129_10000186
281 JGI25406J46586_10000932
282 Ga0065712_10068093
283 Ga0065707_10001241
284 Ga0065707_10090478
285 Ga0070683_100000700
286 Ga0070670_100003765
287 Ga0070670_100004042
288 Ga0070670_100028022
289 Ga0068869_100018833
290 Ga0068868_100004639
291 Ga0070689_100012340
292 Ga0070669_100001163
293 Ga0070669_100007082
294 Ga0070675_100002889
295 Ga0070675_100033351
296 Ga0070674_100000318
297 Ga0070673_100012762
298 Ga0070714_100000017
299 Ga0070713_100042402
300 Ga0070707_100036854
301 Ga0070699_100019842
302 Ga0070684_100000084
303 Ga0070686_100017107
304 Ga0070695_100017493
305 Ga0070664_100000177
306 Ga0070664_100000547
307 Ga0070664_100012172
308 Ga0068857_100013574
309 Ga0068859_100008941
310 Ga0068861_100008382
311 Ga0068851_10000274
312 Ga0068870_10000642
313 Ga0068863_100004431
314 Ga0068858_100007243
315 Ga0068860_100002485
316 Ga0068860_100052520
317 Ga0081539_10000056
318 Ga0081539_10000722
319 Ga0081539_10003038
320 Ga0075364_10001948
321 Ga0097621_100000312
322 Ga0068871_100000880
323 Ga0068871_100025012
324 Ga0075428_100000582
325 Ga0075428_100005634
326 Ga0075428_100008527
327 Ga0075428_100019909
328 Ga0075428_100020871
329 Ga0075428_100030306
330 Ga0075430_100000982
331 Ga0075430_100002594
332 Ga0075430_100004286
333 Ga0075431_100001675
334 Ga0075431_100003520
335 Ga0075431_100028215
336 Ga0075431_100033070
337 Ga0075431_100058029
338 Ga0075433_10000535
339 Ga0075433_10023782
340 Ga0075434_100001076
341 Ga0075434_100002259
342 Ga0075434_100011084
343 Ga0075434_100025361
344 Ga0075429_100001185
345 Ga0075429_100003493
346 Ga0075429_100007080
347 Ga0075429_100009541
348 Ga0075429_100032970
349 Ga0097620_100008941
350 Ga0111539_10000011
351 Ga0111539_10000803
352 Ga0111539_10001118
353 Ga0111539_10001539
354 Ga0111539_10004333
355 Ga0111539_10013846
356 Ga0111539_10019010
357 Ga0111539_10023319
358 Ga0111539_10029383
359 Ga0111539_10036449
360 Ga0111539_10043340
361 Ga0114129_10001097
362 Ga0114129_10002528
363 Ga0114129_10010160
364 Ga0114129_10017842
365 Ga0114129_10018063
366 Ga0114129_10023796
367 Ga0114129_10024901
368 Ga0114129_10026486
369 Ga0114129_10032419
370 Ga0114129_10046690
371 Ga0114129_10051113
372 Ga0114129_10088637
373 Ga0105248_10007672
374 Ga0105248_10019160
375 Ga0105249_10003651
376 Ga0105249_10007847
377 Ga0105249_10022243
378 Ga0105249_10055825
379 Ga0157378_10006306
380 Ga0163162_10022323
381 Ga0157377_10002453
382 Ga0207697_10000291
383 Ga0207656_10000645
384 Ga0207682_10001824
385 Ga0207688_10000459
386 Ga0207645_10004213
387 Ga0207643_10000653
388 Ga0207646_10041996
389 Ga0207681_10018374
390 Ga0207650_10022194
391 Ga0207659_10002625
392 Ga0207659_10022757
393 Ga0207659_10034672
394 Ga0207664_10000016
395 Ga0207706_10003389
396 Ga0207706_10009056
397 Ga0207670_10011586
398 Ga0207670_10011605
399 Ga0207669_10000521
400 Ga0207691_10002859
401 Ga0207691_10008412
402 Ga0207691_10008609
403 Ga0207689_10002288
404 Ga0207689_10038093
405 Ga0207661_10003401
406 Ga0207679_10002063
407 Ga0207677_10004001
408 Ga0207648_10013428
409 Ga0207648_10022671
410 Ga0207674_10020884
411 Ga0207675_100006903
412 Ga0207428_10000212
413 Ga0207428_10000813
414 Ga0207428_10002197
415 Ga0207428_10006240
416 Ga0207428_10012947
417 Ga0207428_10015333
418 Ga0207428_10019818
419 Ga0268264_10014025
420 Ga0268264_10019823
421 Ga0307408_100005965
422 Ga0307408_100029722
423 Ga0307413_10017045
424 Ga0307410_10011703
425 Ga0307416_100014592
426 Ga0373938_0000602
427 Ga0373929_0000608
428 Ga0373951_0003261
429 Ga0373943_0021510
430 Ga0373937_0014031
431 Ga0373925_0010155
432 Ga0453684_0014892
433 Ga0453684_0078535
434 Ga0451576_0026335
435 Ga0495592_0039168
436 Ga0495629_0004391
437 Ga0495638_0003000
438 Ga0495582_0007230
439 Ga0495643_0023910
440 Ga0495647_0004809
441 Ga0495658_0012634
442 Ga0495593_0008090
443 Ga0496102_0091502
444 Ga0496105_0010856
445 Ga0496108_0000350
446 Ga0496108_0020691
447 Ga0496109_0000257
448 Ga0496109_0028004
449 Ga0496110_0000390
450 Ga0496110_0010881
451 Ga0496111_0006755
452 Ga0496112_0002169
453 Ga0496112_0067343
454 Ga0496114_0007511
455 Ga0496114_0018343
456 Ga0496115_0019594
457 Ga0501031_0000663
458 Ga0501031_0034598
459 Ga0501032_0008240
460 Ga0501033_0008789
461 Ga0501033_0009654
462 Ga0501034_0021868
463 Ga0501034_0075185
464 Ga0501034_0095048
465 Ga0501034_0100527
466 Ga0501036_0000589
467 Ga0501036_0013349
468 Ga0501036_0013605
469 Ga0501036_0016793
470 Ga0501037_0003434
471 Ga0501038_0000258
472 Ga0501038_0004194
473 Ga0501038_0040035
474 Ga0501039_0006532
475 Ga0501040_0003167
476 Ga0501040_0033476
477 Ga0501041_0017059
478 Ga0501042_0010749
479 Ga0501043_0003353
480 Ga0501043_0008646
481 Ga0501043_0012579
482 Ga0501046_0008051
483 Ga0501046_0017415
484 Ga0501046_0033173
485 Ga0501047_0000525
486 Ga0501047_0004623
487 Ga0501047_0019213
488 Ga0501048_0001156
489 Ga0501067_0001866
490 Ga0501069_0001383
491 Ga0501069_0018697
492 Ga0501070_0006154
493 Ga0501071_0002469
494 Ga0501071_0002624
495 Ga0501071_0010061
496 Ga0501073_0005978
497 Ga0501073_0018124
498 Ga0501073_0031054
499 Ga0501080_0002558
500 Ga0501080_0002837
501 Ga0501080_0026794
502 Ga0501081_0043452
503 Ga0501083_0001323
504 Ga0501035_0008650
505 Ga0501035_0017522
506 Ga0501044_0014724
507 Ga0501045_0008157
508 Ga0501045_0022421
509 nmdc:mga00v17_13712_c1
510 nmdc:mga05p37_17792_c1
511 nmdc:mga05p37_19862_c1
512 nmdc:mga05p37_2040_c1
513 nmdc:mga05p37_369_c2
514 nmdc:mga05p37_731_c1
515 nmdc:mga09592_32523_c1
516 nmdc:mga09592_3277_c1
517 nmdc:mga09592_38325_c1
518 nmdc:mga09592_51177_c1
519 nmdc:mga09592_8114_c1
520 nmdc:mga0qj67_2042_c1
521 nmdc:mga06r32_1853_c1
522 nmdc:mga06r32_22867_c1
523 nmdc:mga06r32_24706_c1
524 nmdc:mga06r32_6002_c2
525 nmdc:mga08y16_1262_c1
526 nmdc:mga08y16_12_c1
527 nmdc:mga08y16_15823_c1
528 nmdc:mga08y16_1840_c1
529 nmdc:mga08y16_18622_c1
530 nmdc:mga08y16_20371_c1
531 nmdc:mga08y16_40785_c1
532 nmdc:mga08y16_66178_c1
533 nmdc:mga0n895_335_c1
534 nmdc:mga0n895_8857_c1
535 nmdc:mga0rr50_29879_c1
536 nmdc:mga0rr50_35851_c1
537 nmdc:mga08x19_3605_c1
538 nmdc:mga0a205_1172_c1
539 nmdc:mga0a205_2832_c2
540 nmdc:mga0a205_531_c1
541 nmdc:mga0a205_6425_c1
542 nmdc:mga0a205_72238_c1
543 Ga0495619_0000902
544 Ga0501084_0004893
545 Ga0501084_0011428
546 Ga0501084_0014722
547 Ga0501084_0030638
548 Ga0590071_000946
549 Ga0590077_000746
550 Ga0501082_0000994
551 Ga0501082_0006669
552 Ga0501082_0013021
553 Ga0501082_0018629
554 Ga0501082_0024856
555 Ga0501082_0077196
556 Ga0530510_0004223
557 2894776454
558 2910248581

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21478

GcvP2_C

Glycine dehydrogenase, C-terminal domain

810

933

0.98

PF02347

GDC-P

Glycine cleavage system P-protein

33

462

0.96

PF02347

GDC-P

Glycine cleavage system P-protein

477

781

0.73

PF01212

Beta_elim_lyase

Beta-eliminating lyase

569

747

0.71

Structural Annotation

Top 5 Hits

ID Description Score Start End
4lgl-assembly1.cif.gz_B crystal structure of glycine decarboxylase p-protein from synechocystis sp. pcc 6803, apo form 0.9661 4 933
4lhd-assembly1.cif.gz_B crystal structure of synechocystis sp. pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop 0.9631 4 945
4lhc-assembly1.cif.gz_A crystal structure of synechocystis sp. pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine 0.9601 4 945
6i33-assembly1.cif.gz_A crystal structure of human glycine decarboxylase (p-protein) 0.9599 2 947
4lhd-assembly1.cif.gz_A crystal structure of synechocystis sp. pcc 6803 glycine decarboxylase (p-protein), holo form with pyridoxal-5'-phosphate and glycine, closed flexible loop 0.9591 4 945
ID Description Score Start End Superfamily
af_Q54KM7_558_805_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9574 518 763 3.40.640.10
af_K7TIN2_588_818_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9552 516 737 3.40.640.10
af_Q54KM7_558_805_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.946 518 763 3.40.640.10
af_P33195_96_355_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9359 93 355 3.40.640.10
af_P49095_840_973_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9337 766 896 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7S1CMZ0-F1-model_v4 Glycine dehydrogenase C-terminal domain-containing protein 0.9939 792 914 GO:0004375
GO:0005739
GO:0005960
GO:0016594
GO:0019464
GO:0030170
AF-A0A2S8ACC2-F1-model_v4 Glycine dehydrogenase C-terminal domain-containing protein 0.9838 819 925 GO:0004375
GO:0005829
GO:0005960
GO:0016594
GO:0019464
GO:0030170
AF-A0A530GPE7-F1-model_v4 Glycine dehydrogenase (Aminomethyl-transferring) (EC 1.4.4.2) 0.9823 513 688 GO:0004375
GO:0005829
GO:0005960
GO:0016594
GO:0019464
GO:0030170
AF-A0A0S7F3T5-F1-model_v4 deleted 0.9811 84 283
AF-A0A3B9F4B5-F1-model_v4 Glycine dehydrogenase (Aminomethyl-transferring) (EC 1.4.4.2) 0.9792 132 308 GO:0004375
GO:0005829
GO:0005960
GO:0016594
GO:0019464
GO:0030170

Map