F382654

General Info

Members Datasets Scaffolds Average Seq Length
278 194 556 409

Family's Representative Sequence

Representative Sequence 3300049570|Ga0501033_0098399|Ga0501033_0098399_14_1459
Length 460
Sequence MGAMVEPDGGDSNKADRADGAGDDAAGGAEPRAPRRLSTREAADRLGVKPETLYAYVSRGLLGSVRAPGGRGSTFDPAEVDALADRSRRTRPGGLPPELRTGITLIGEGHYWYRGVDAVALAGAYGYEAAAEWLWTGRLDPATRFTVPPTTAEAATRAAGALPAGCALTDRLRAAVVAAAAADPLRFDLAPAAVLERARGLVATMVAALPLAGGEPGPHPEERVDAADGSASTDAGSAGESLAGRLWRRLTTAPPDPGAVRALDAALVLLMDHDLAASTFAARVAASARAHPYAVVSAGLAAMDGPLHGAASGLAHRMLGEVLARGAAGPVVADQLRAGHRPPGLGHRLYPGADPRATALFALLDRYPAAAAPLAAAREVERVAAPGTGAHANVDLALAVLSVAAGMPAEAGEVVFGIARTAGWIAHALEEYGEPPLRLRRVGGYTGLRPPVPLPRPEGG

Samples

Sample ID Description Type Environment
1 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
11 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
20 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
21 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
22 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
23 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
24 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
30 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
31 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
32 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
33 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
34 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
35 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
38 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
39 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
40 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
41 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
42 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
43 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
44 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
45 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
46 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
47 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
48 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
49 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
50 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
51 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
52 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
53 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
54 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
55 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
56 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
60 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
67 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
68 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
69 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
72 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
76 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
77 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
78 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
79 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
80 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
90 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
93 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
94 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
95 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
98 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
99 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
100 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
106 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
107 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
108 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
109 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
110 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
111 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
126 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
127 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
128 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
129 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
130 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
131 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
132 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
133 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
134 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
135 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
136 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
137 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
140 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
141 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
142 2643221548 Streptomyces sp. Root55 Isolate Unclassified
143 2643221578 Streptomyces sp. Root63 Isolate Unclassified
144 2643221647 Streptomyces sp. Root369 Isolate Unclassified
145 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
146 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
147 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
148 2643221714 Streptomyces sp. Root264 Isolate Unclassified
149 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
150 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
151 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
152 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
153 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
154 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
155 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
156 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
157 2808606448 Streptomyces sp. 193411 Isolate Unclassified
158 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
159 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
160 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
161 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
162 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
163 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
164 2862574272 Streptomyces sp. AcE210 Isolate Nodule
165 2867428634 Streptomyces sp. RP5T Isolate Unclassified
166 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
167 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
168 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
169 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
170 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
171 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
172 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
173 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
174 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
175 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
176 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
177 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
178 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
179 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
180 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
181 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
182 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
183 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
184 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
185 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
186 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
187 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
188 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
189 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
190 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
191 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
192 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
193 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
194 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.86
Metatranscriptomes 0
Isolates 20.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.68
Nodule 2.16
Rhizoplane 1.08
Rhizosphere 75.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501033_0098399 3300049570 Bacteria 2136
2 rootH1_10001120 3300003316 Bacteria 13623
3 rootH2_10036059 3300003320 Bacteria 4222
4 rootL2_10069553 3300003322 Bacteria 3159
5 rootH1_10002226 3300003323 Bacteria 6058
6 Ga0070668_100084062 3300005347 Bacteria 2499
7 Ga0070710_10000312 3300005437 Bacteria 23171
8 Ga0070665_100228909 3300005548 Bacteria 1859
9 Ga0068856_100088994 3300005614 Bacteria 3070
10 Ga0075368_10001468 3300006042 Bacteria 7547
11 Ga0075364_10002092 3300006051 Bacteria 11141
12 Ga0075367_10000073 3300006178 Bacteria 25699
13 Ga0075428_100000293 3300006844 Bacteria 48891
14 Ga0075430_100003629 3300006846 Bacteria 12941
15 Ga0075431_100035348 3300006847 Bacteria 5144
16 Ga0075429_100003057 3300006880 Bacteria 14192
17 Ga0099826_10041989 3300006948 Bacteria 3167
18 Ga0114129_10000754 3300009147 Bacteria 41193
19 Ga0105239_10172306 3300010375 Bacteria 2420
20 Ga0105246_10011059 3300011119 Bacteria 5592
21 Ga0182008_10000172 3300014497 Bacteria 50594
22 Ga0182007_10002732 3300015262 Bacteria 8624
23 Ga0183367_1001 3300015688 Bacteria 1225545
24 Ga0207692_10005895 3300025898 Bacteria 4940
25 Ga0207645_10063153 3300025907 Bacteria 2366
26 Ga0207668_10075350 3300025972 Bacteria 2425
27 Ga0207678_10000313 3300026067 Bacteria 43785
28 Ga0268266_10151001 3300028379 Bacteria 2094
29 Ga0307517_10003436 3300028786 Bacteria 24619
30 Ga0307517_10010040 3300028786 Bacteria 13310
31 Ga0307515_10006036 3300028794 Bacteria 24367
32 Ga0307511_10004427 3300030521 Bacteria 14342
33 Ga0307511_10022749 3300030521 Bacteria 5863
34 Ga0307512_10019357 3300030522 Bacteria 6197
35 Ga0316177_1152286 3300030731 Bacteria 1675
36 Ga0314311_1142640 3300030733 Bacteria 5363
37 Ga0316180_1135442 3300030736 Bacteria 3878
38 Ga0307513_10002525 3300031456 Bacteria 25288
39 Ga0307513_10325537 3300031456 Bacteria 1293
40 Ga0307509_10009853 3300031507 Bacteria 11821
41 Ga0307509_10108818 3300031507 Bacteria 2784
42 Ga0307508_10004372 3300031616 Bacteria 13819
43 Ga0307508_10005795 3300031616 Bacteria 11677
44 Ga0307508_10009453 3300031616 Bacteria 8968
45 Ga0307508_10066718 3300031616 Bacteria 3167
46 Ga0307508_10232950 3300031616 Bacteria 1439
47 Ga0307514_10002806 3300031649 Bacteria 17480
48 Ga0307516_10001470 3300031730 Bacteria 32516
49 Ga0307516_10019166 3300031730 Bacteria 7091
50 Ga0307516_10022680 3300031730 Bacteria 6444
51 Ga0307507_10032626 3300033179 Bacteria 5431
52 Ga0307507_10061900 3300033179 Bacteria 3481
53 Ga0307507_10137523 3300033179 Bacteria 1886
54 Ga0307510_10017763 3300033180 Bacteria 8380
55 Ga0307510_10080094 3300033180 Bacteria 3178
56 Ga0373951_0000026 3300035091 Bacteria 60332
57 Ga0395899_0105946 3300037312 Bacteria 2025
58 Ga0395898_0003752 3300037466 Bacteria 16835
59 Ga0395898_0010252 3300037466 Bacteria 9810
60 Ga0395898_0055978 3300037466 Bacteria 3846
61 Ga0395901_0267554 3300038443 Bacteria 1778
62 Ga0439436_0001896 3300041404 Bacteria 6180
63 Ga0439439_0010441 3300041406 Bacteria 2220
64 Ga0439439_0030048 3300041406 Bacteria 1380
65 Ga0439448_0002071 3300042005 Bacteria 5383
66 Ga0439449_0004481 3300042007 Bacteria 5393
67 Ga0439449_0033383 3300042007 Bacteria 1917
68 Ga0439457_001163 3300042014 Bacteria 7905
69 Ga0450903_000070 3300042138 Bacteria 20519
70 Ga0439458_0006459 3300042157 Bacteria 2614
71 Ga0439458_0011132 3300042157 Bacteria 2010
72 Ga0439458_0014508 3300042157 Bacteria 1779
73 Ga0466969_0004977 3300044656 Bacteria 7076
74 Ga0466972_0005996 3300044658 Bacteria 6105
75 Ga0466972_0023540 3300044658 Bacteria 3061
76 Ga0466972_0055272 3300044658 Bacteria 1909
77 Ga0466965_0000706 3300044683 Bacteria 12410
78 Ga0466965_0000751 3300044683 Bacteria 12172
79 Ga0466965_0002951 3300044683 Bacteria 7363
80 Ga0466965_0003987 3300044683 Bacteria 6543
81 Ga0466966_0018866 3300044684 Bacteria 4544
82 Ga0466966_0026469 3300044684 Bacteria 3785
83 Ga0466961_0000652 3300044693 Bacteria 21812
84 Ga0466961_0009650 3300044693 Bacteria 6144
85 Ga0466963_0000210 3300044694 Bacteria 24944
86 Ga0466971_0002964 3300044719 Bacteria 7205
87 Ga0466971_0039673 3300044719 Bacteria 2113
88 Ga0466970_0000480 3300044765 Bacteria 19686
89 Ga0466970_0002073 3300044765 Bacteria 9700
90 Ga0466957_0000438 3300044842 Bacteria 20495
91 Ga0466959_0009267 3300045049 Bacteria 6995
92 Ga0466958_0001374 3300045836 Bacteria 11499
93 Ga0466967_0000608 3300045976 Bacteria 17847
94 Ga0466967_0121166 3300045976 Bacteria 2417
95 Ga0495592_0018018 3300046454 Bacteria 5364
96 Ga0495592_0088913 3300046454 Bacteria 2219
97 Ga0495603_0003049 3300046455 Bacteria 9936
98 Ga0495603_0006685 3300046455 Bacteria 6918
99 Ga0495629_0005156 3300046459 Bacteria 9775
100 Ga0495629_0012245 3300046459 Bacteria 6214
101 Ga0495629_0033048 3300046459 Bacteria 3660
102 Ga0495651_0004619 3300046462 Bacteria 10528
103 Ga0495651_0026903 3300046462 Bacteria 4479
104 Ga0495582_0007065 3300046473 Bacteria 6239
105 Ga0495605_0009794 3300046474 Bacteria 5378
106 Ga0495639_0012488 3300046475 Bacteria 3663
107 Ga0495662_0007274 3300046476 Bacteria 5478
108 Ga0495664_0000182 3300046477 Bacteria 31040
109 Ga0495585_0096495 3300046492 Bacteria 1586
110 Ga0495594_0000206 3300046499 Bacteria 28775
111 Ga0495594_0031299 3300046499 Bacteria 2884
112 Ga0495594_0061541 3300046499 Bacteria 2077
113 Ga0495594_0073033 3300046499 Bacteria 1908
114 Ga0495594_0124667 3300046499 Bacteria 1457
115 Ga0495596_0029334 3300046500 Bacteria 2206
116 Ga0495583_0044144 3300046506 Bacteria 2070
117 Ga0495583_0048706 3300046506 Bacteria 1943
118 Ga0495606_0031029 3300046507 Bacteria 3722
119 Ga0495608_0020136 3300046511 Bacteria 4586
120 Ga0495620_0030542 3300046515 Bacteria 2479
121 Ga0495628_0041940 3300046516 Bacteria 3651
122 Ga0495628_0053410 3300046516 Bacteria 3189
123 Ga0495631_0002635 3300046518 Bacteria 10015
124 Ga0495643_0006498 3300046522 Bacteria 7692
125 Ga0495643_0010688 3300046522 Bacteria 5640
126 Ga0495648_0023147 3300046524 Bacteria 4261
127 Ga0495652_0030254 3300046529 Bacteria 4750
128 Ga0495652_0102898 3300046529 Bacteria 2313
129 Ga0495640_0011689 3300046533 Bacteria 6739
130 Ga0495640_0016863 3300046533 Bacteria 5459
131 Ga0495587_0019283 3300046536 Bacteria 4223
132 Ga0495597_0006015 3300046542 Bacteria 6326
133 Ga0495622_0008345 3300046557 Bacteria 4798
134 Ga0495622_0025470 3300046557 Bacteria 2762
135 Ga0495668_0069415 3300046616 Bacteria 1938
136 Ga0495634_0019349 3300046642 Bacteria 4839
137 Ga0495634_0037114 3300046642 Bacteria 3331
138 Ga0495634_0068406 3300046642 Bacteria 2346
139 Ga0495635_0001216 3300046663 Bacteria 17230
140 Ga0495635_0023557 3300046663 Bacteria 4288
141 Ga0495661_0015405 3300046665 Bacteria 5103
142 Ga0495588_0002773 3300046674 Bacteria 7526
143 Ga0495588_0070177 3300046674 Bacteria 1821
144 Ga0495657_0010081 3300046675 Bacteria 7121
145 Ga0495646_0004139 3300046680 Bacteria 9105
146 Ga0495613_0022268 3300046689 Bacteria 4723
147 Ga0495613_0024395 3300046689 Bacteria 4506
148 Ga0495649_0025191 3300046694 Bacteria 3313
149 Ga0495649_0033316 3300046694 Bacteria 2836
150 Ga0495589_0035357 3300046794 Bacteria 2505
151 Ga0495581_0005374 3300047315 Bacteria 7413
152 Ga0495604_0003118 3300047317 Bacteria 13244
153 Ga0495604_0021804 3300047317 Bacteria 5113
154 Ga0495636_0006239 3300047318 Bacteria 4682
155 Ga0495636_0059231 3300047318 Bacteria 1616
156 Ga0495676_0001740 3300047321 Bacteria 19028
157 Ga0495676_0009618 3300047321 Bacteria 8797
158 Ga0495676_0119001 3300047321 Bacteria 1925
159 Ga0495680_0015749 3300047322 Bacteria 6510
160 Ga0495687_001325 3300047443 Bacteria 23102
161 Ga0495687_002791 3300047443 Bacteria 13490
162 Ga0495687_054622 3300047443 Bacteria 1675
163 Ga0495685_000469 3300047447 Bacteria 12564
164 Ga0495685_002357 3300047447 Bacteria 5905
165 Ga0495685_012484 3300047447 Bacteria 2878
166 Ga0495685_041090 3300047447 Bacteria 1580
167 Ga0495681_0003396 3300047470 Bacteria 11087
168 Ga0495681_0010059 3300047470 Bacteria 5759
169 Ga0495686_0149102 3300047472 Bacteria 1374
170 Ga0495593_0010896 3300047673 Bacteria 5238
171 Ga0495614_0005215 3300048089 Bacteria 5862
172 Ga0495614_0008397 3300048089 Bacteria 4593
173 Ga0496108_0000081 3300048911 Bacteria 102238
174 Ga0496109_0016794 3300048912 Bacteria 6405
175 Ga0496109_0094596 3300048912 Bacteria 2766
176 Ga0501032_0026735 3300049569 Bacteria 3966
177 Ga0501033_0003431 3300049570 Bacteria 13041
178 Ga0501033_0008512 3300049570 Bacteria 7938
179 Ga0501033_0113214 3300049570 Bacteria 1973
180 Ga0501034_0010557 3300049571 Bacteria 9613
181 Ga0501034_0076663 3300049571 Bacteria 3350
182 Ga0501034_0157490 3300049571 Bacteria 2244
183 Ga0501036_0000968 3300049572 Bacteria 21659
184 Ga0501036_0005545 3300049572 Bacteria 10234
185 Ga0501038_0005115 3300049574 Bacteria 12187
186 Ga0501038_0035768 3300049574 Bacteria 4359
187 Ga0501039_0002983 3300049575 Bacteria 12661
188 Ga0501043_0009135 3300049579 Bacteria 7797
189 Ga0501043_0080569 3300049579 Bacteria 2558
190 Ga0501047_0000261 3300049581 Bacteria 61793
191 Ga0501047_0002502 3300049581 Bacteria 17513
192 Ga0501047_0085564 3300049581 Bacteria 3029
193 Ga0501070_0003111 3300049586 Bacteria 14455
194 Ga0501070_0051105 3300049586 Bacteria 3431
195 Ga0501070_0165289 3300049586 Bacteria 1824
196 Ga0501074_0000096 3300049590 Bacteria 42346
197 Ga0501035_0002086 3300049822 Bacteria 19891
198 Ga0501035_0009881 3300049822 Bacteria 8857
199 Ga0501035_0022599 3300049822 Bacteria 5777
200 Ga0501035_0025813 3300049822 Bacteria 5384
201 Ga0501035_0065442 3300049822 Bacteria 3228
202 Ga0501044_0001582 3300049823 Bacteria 26652
203 Ga0501044_0003465 3300049823 Bacteria 17778
204 Ga0501044_0033101 3300049823 Bacteria 5432
205 Ga0501044_0034144 3300049823 Bacteria 5338
206 Ga0501044_0069305 3300049823 Bacteria 3591
207 Ga0501044_0099764 3300049823 Bacteria 2922
208 nmdc:mga06z11_524_c1 3300050494 Bacteria 14191
209 nmdc:mga07m45_9401_c1 3300050496 Bacteria 5069
210 nmdc:mga05p37_1763_c1 3300050507 Bacteria 25281
211 nmdc:mga09592_5768_c1 3300050508 Bacteria 10095
212 nmdc:mga0qj67_14465_c1 3300050509 Bacteria 5967
213 nmdc:mga06r32_39361_c1 3300050510 Bacteria 4485
214 Ga0500560_000112 3300053107 Bacteria 8463
215 Ga0500614_008328 3300053123 Bacteria 2199
216 Ga0500573_0068044 3300053140 Bacteria 2034
217 Ga0500600_0013048 3300053149 Bacteria 5042
218 Ga0500600_0077135 3300053149 Bacteria 1812
219 Ga0500616_0004568 3300053153 Bacteria 9799
220 Ga0500633_0001284 3300053160 Bacteria 4644
221 Ga0500634_0006174 3300053161 Bacteria 5772
222 Ga0466962_0000498 3300061719 Bacteria 17033
223 2585310085 2582581313 Bacteria 10042643
224 2585318485 2582581314 Bacteria 11452267
225 2616699269 2616644814 Bacteria 11555299
226 2643761383 2643221548 Bacteria 8053412
227 2643899015 2643221578 Bacteria 9213798
228 2644265022 2643221647 Bacteria 10741251
229 2644402773 2643221673 Bacteria 9196637
230 2644442344 2643221678 Bacteria 9540101
231 2644459215 2643221682 Bacteria 6743283
232 2644626471 2643221714 Bacteria 9015452
233 2676203967 2675902999 Bacteria 9438463
234 2774848543 2773857921 Bacteria 9435764
235 2784590807 2784132148 Bacteria 8627943
236 2785340735 2784746763 Bacteria 9783172
237 2785372030 2784746768 Bacteria 10036182
238 2786673145 2786546132 Bacteria 10419719
239 2808844532 2808606359 Bacteria 9866990
240 2808914108 2808606375 Bacteria 9466072
241 2809234559 2808606448 Bacteria 8656184
242 2819697695 2818991463 Bacteria 7948711
243 2819742199 2818991472 Bacteria 10089953
244 2837269051 2837268691 Bacteria 7850704
245 2852641559 2852635781 Bacteria 8251373
246 2862284152 2862281513 Bacteria 9621493
247 2862383371 2862382967 Bacteria 10317375
248 2862576980 2862574272 Bacteria 10567477
249 2867431071 2867428634 Bacteria 9590268
250 2873153633 2873151551 Bacteria 8625867
251 2875397176 2875391855 Bacteria 7600475
252 2877678545 2877676314 Bacteria 9512378
253 2912717110 2912715099 Bacteria 9460473
254 2912729716 2912723979 Bacteria 8557534
255 2919474168 2919468124 Bacteria 9133025
256 2935393531 2935390628 Bacteria 7043367
257 2946047388 2946045630 Bacteria 8527308
258 2946078182 2946072368 Bacteria 8999607
259 2947226464 2947224130 Bacteria 9938529
260 2954010626 2954002825 Bacteria 9173742
261 2954383516 2954380949 Bacteria 10050426
262 2954679461 2954673503 Bacteria 9685905
263 2954684695 2954682443 Bacteria 9862841
264 2954694308 2954691527 Bacteria 10720516
265 2954709511 2954701450 Bacteria 10834262
266 2954713816 2954711539 Bacteria 10867210
267 2954723783 2954721474 Bacteria 10456478
268 2954738053 2954731030 Bacteria 10243860
269 2954742683 2954740390 Bacteria 10229294
270 2954756911 2954749733 Bacteria 10366972
271 2954761645 2954759201 Bacteria 9358192
272 2990067445 2990059506 Bacteria 9321252
273 2990093335 2990088156 Bacteria 6657676
274 8008563254 8008558824 Bacteria 10610750
275 8008576707 8008574985 Bacteria 7815457
276 8023628464 8023623736 Bacteria 8593882
277 8025484370 8025478263 Bacteria 8209203
278 8056830038 8056829672 Bacteria 9045328
279 Ga0501033_0098399
280 rootH1_10001120
281 rootH2_10036059
282 rootL2_10069553
283 rootH1_10002226
284 Ga0070668_100084062
285 Ga0070710_10000312
286 Ga0070665_100228909
287 Ga0068856_100088994
288 Ga0075368_10001468
289 Ga0075364_10002092
290 Ga0075367_10000073
291 Ga0075428_100000293
292 Ga0075430_100003629
293 Ga0075431_100035348
294 Ga0075429_100003057
295 Ga0099826_10041989
296 Ga0114129_10000754
297 Ga0105239_10172306
298 Ga0105246_10011059
299 Ga0182008_10000172
300 Ga0182007_10002732
301 Ga0183367_1001
302 Ga0207692_10005895
303 Ga0207645_10063153
304 Ga0207668_10075350
305 Ga0207678_10000313
306 Ga0268266_10151001
307 Ga0307517_10003436
308 Ga0307517_10010040
309 Ga0307515_10006036
310 Ga0307511_10004427
311 Ga0307511_10022749
312 Ga0307512_10019357
313 Ga0316177_1152286
314 Ga0314311_1142640
315 Ga0316180_1135442
316 Ga0307513_10002525
317 Ga0307513_10325537
318 Ga0307509_10009853
319 Ga0307509_10108818
320 Ga0307508_10004372
321 Ga0307508_10005795
322 Ga0307508_10009453
323 Ga0307508_10066718
324 Ga0307508_10232950
325 Ga0307514_10002806
326 Ga0307516_10001470
327 Ga0307516_10019166
328 Ga0307516_10022680
329 Ga0307507_10032626
330 Ga0307507_10061900
331 Ga0307507_10137523
332 Ga0307510_10017763
333 Ga0307510_10080094
334 Ga0373951_0000026
335 Ga0395899_0105946
336 Ga0395898_0003752
337 Ga0395898_0010252
338 Ga0395898_0055978
339 Ga0395901_0267554
340 Ga0439436_0001896
341 Ga0439439_0010441
342 Ga0439439_0030048
343 Ga0439448_0002071
344 Ga0439449_0004481
345 Ga0439449_0033383
346 Ga0439457_001163
347 Ga0450903_000070
348 Ga0439458_0006459
349 Ga0439458_0011132
350 Ga0439458_0014508
351 Ga0466969_0004977
352 Ga0466972_0005996
353 Ga0466972_0023540
354 Ga0466972_0055272
355 Ga0466965_0000706
356 Ga0466965_0000751
357 Ga0466965_0002951
358 Ga0466965_0003987
359 Ga0466966_0018866
360 Ga0466966_0026469
361 Ga0466961_0000652
362 Ga0466961_0009650
363 Ga0466963_0000210
364 Ga0466971_0002964
365 Ga0466971_0039673
366 Ga0466970_0000480
367 Ga0466970_0002073
368 Ga0466957_0000438
369 Ga0466959_0009267
370 Ga0466958_0001374
371 Ga0466967_0000608
372 Ga0466967_0121166
373 Ga0495592_0018018
374 Ga0495592_0088913
375 Ga0495603_0003049
376 Ga0495603_0006685
377 Ga0495629_0005156
378 Ga0495629_0012245
379 Ga0495629_0033048
380 Ga0495651_0004619
381 Ga0495651_0026903
382 Ga0495582_0007065
383 Ga0495605_0009794
384 Ga0495639_0012488
385 Ga0495662_0007274
386 Ga0495664_0000182
387 Ga0495585_0096495
388 Ga0495594_0000206
389 Ga0495594_0031299
390 Ga0495594_0061541
391 Ga0495594_0073033
392 Ga0495594_0124667
393 Ga0495596_0029334
394 Ga0495583_0044144
395 Ga0495583_0048706
396 Ga0495606_0031029
397 Ga0495608_0020136
398 Ga0495620_0030542
399 Ga0495628_0041940
400 Ga0495628_0053410
401 Ga0495631_0002635
402 Ga0495643_0006498
403 Ga0495643_0010688
404 Ga0495648_0023147
405 Ga0495652_0030254
406 Ga0495652_0102898
407 Ga0495640_0011689
408 Ga0495640_0016863
409 Ga0495587_0019283
410 Ga0495597_0006015
411 Ga0495622_0008345
412 Ga0495622_0025470
413 Ga0495668_0069415
414 Ga0495634_0019349
415 Ga0495634_0037114
416 Ga0495634_0068406
417 Ga0495635_0001216
418 Ga0495635_0023557
419 Ga0495661_0015405
420 Ga0495588_0002773
421 Ga0495588_0070177
422 Ga0495657_0010081
423 Ga0495646_0004139
424 Ga0495613_0022268
425 Ga0495613_0024395
426 Ga0495649_0025191
427 Ga0495649_0033316
428 Ga0495589_0035357
429 Ga0495581_0005374
430 Ga0495604_0003118
431 Ga0495604_0021804
432 Ga0495636_0006239
433 Ga0495636_0059231
434 Ga0495676_0001740
435 Ga0495676_0009618
436 Ga0495676_0119001
437 Ga0495680_0015749
438 Ga0495687_001325
439 Ga0495687_002791
440 Ga0495687_054622
441 Ga0495685_000469
442 Ga0495685_002357
443 Ga0495685_012484
444 Ga0495685_041090
445 Ga0495681_0003396
446 Ga0495681_0010059
447 Ga0495686_0149102
448 Ga0495593_0010896
449 Ga0495614_0005215
450 Ga0495614_0008397
451 Ga0496108_0000081
452 Ga0496109_0016794
453 Ga0496109_0094596
454 Ga0501032_0026735
455 Ga0501033_0003431
456 Ga0501033_0008512
457 Ga0501033_0113214
458 Ga0501034_0010557
459 Ga0501034_0076663
460 Ga0501034_0157490
461 Ga0501036_0000968
462 Ga0501036_0005545
463 Ga0501038_0005115
464 Ga0501038_0035768
465 Ga0501039_0002983
466 Ga0501043_0009135
467 Ga0501043_0080569
468 Ga0501047_0000261
469 Ga0501047_0002502
470 Ga0501047_0085564
471 Ga0501070_0003111
472 Ga0501070_0051105
473 Ga0501070_0165289
474 Ga0501074_0000096
475 Ga0501035_0002086
476 Ga0501035_0009881
477 Ga0501035_0022599
478 Ga0501035_0025813
479 Ga0501035_0065442
480 Ga0501044_0001582
481 Ga0501044_0003465
482 Ga0501044_0033101
483 Ga0501044_0034144
484 Ga0501044_0069305
485 Ga0501044_0099764
486 nmdc:mga06z11_524_c1
487 nmdc:mga07m45_9401_c1
488 nmdc:mga05p37_1763_c1
489 nmdc:mga09592_5768_c1
490 nmdc:mga0qj67_14465_c1
491 nmdc:mga06r32_39361_c1
492 Ga0500560_000112
493 Ga0500614_008328
494 Ga0500573_0068044
495 Ga0500600_0013048
496 Ga0500600_0077135
497 Ga0500616_0004568
498 Ga0500633_0001284
499 Ga0500634_0006174
500 Ga0466962_0000498
501 2585310085
502 2585318485
503 2616699269
504 2643761383
505 2643899015
506 2644265022
507 2644402773
508 2644442344
509 2644459215
510 2644626471
511 2676203967
512 2774848543
513 2784590807
514 2785340735
515 2785372030
516 2786673145
517 2808844532
518 2808914108
519 2809234559
520 2819697695
521 2819742199
522 2837269051
523 2852641559
524 2862284152
525 2862383371
526 2862576980
527 2867431071
528 2873153633
529 2875397176
530 2877678545
531 2912717110
532 2912729716
533 2919474168
534 2935393531
535 2946047388
536 2946078182
537 2947226464
538 2954010626
539 2954383516
540 2954679461
541 2954684695
542 2954694308
543 2954709511
544 2954713816
545 2954723783
546 2954738053
547 2954742683
548 2954756911
549 2954761645
550 2990067445
551 2990093335
552 8008563254
553 8008576707
554 8023628464
555 8025484370
556 8056830038

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13411

MerR_1

MerR HTH family regulatory protein

37

85

0.91

PF12728

HTH_17

Helix-turn-helix domain

36

88

0.89

PF00285

Citrate_synt

Citrate synthase, C-terminal domain

97

442

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6amk-assembly1.cif.gz_B structure of streptomyces venezuelae bldc-whii opt complex 0.8931 14 61
6amk-assembly1.cif.gz_A structure of streptomyces venezuelae bldc-whii opt complex 0.8661 14 61
4j2n-assembly1.cif.gz_A crystal structure of mycobacteriophage pukovnik xis 0.8505 10 61
6ama-assembly1.cif.gz_B structure of s. coelicolor/s. venezuelae bldc-smea-ssfa complex to 3.09 angstrom 0.8227 12 73
6amk-assembly1.cif.gz_B structure of streptomyces venezuelae bldc-whii opt complex 0.8159 14 61
ID Description Score Start End Superfamily
af_I6YE30_32_77_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9146 15 59 1.10.10.10
af_P9WKT7_24_74_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9082 15 63 1.10.10.10
af_O53807_4_54_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8977 15 61 1.10.10.10
af_I6YE30_32_77_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8612 15 59 1.10.10.10
af_P9WLC3_19_69_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8327 15 67 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A838J9D2-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.9565 14 69 GO:0003677
GO:0006352
GO:0016987
AF-A0A7K2ZRX9-F1-model_v4 Citrate synthase 0.948 127 222
AF-A0A353CW39-F1-model_v4 HTH merR-type domain-containing protein 0.9421 10 64 GO:0003677
GO:0006355
AF-A0A0L8PJX1-F1-model_v4 deleted 0.92 263 368
AF-A0A6G2URC7-F1-model_v4 Citrate synthase 0.9184 80 258 GO:0046912

Map