F382643

General Info

Members Datasets Scaffolds Average Seq Length
278 171 261 221

Family's Representative Sequence

Representative Sequence 3300049459|Ga0495678_000004|Ga0495678_000004_286836_287582
Length 248
Sequence MPLGPRRPRGWRGHSTRPEARITWKENTLRLLLVEDDPMIGESIEEGLRGESYAVDWVRDGPAADLALAAFTYDLLLLDLGLPGKQGMDVLRTLRVAGADLPVLIITARDGTPARVAGLDAGADDYLVKPFDLDELLARIRALLRRRVARTRSVIVHGAVTLDLASHDVFLHGQPVKLSSREFSVLRALLDNPGSVVSKAQLEEKLYGWNSEVESNTVDVYVHHLRKKFGADFIKNVRGVGYKIPAAP

Samples

Sample ID Description Type Environment
1 2600255292 Janthinobacterium lividum NFR18 Isolate Rhizoplane
2 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
3 2738541280 Massilia sp. GV090 Isolate Unclassified
4 2842711865 Duganella sp. R-73148 Isolate Unclassified
5 2857472729 Cohnella sp. R-74144 Isolate Unclassified
6 2857547612 Janthinobacterium sp. R-74502 Isolate Unclassified
7 2857558681 Duganella sp. R-74565 Isolate Unclassified
8 2857564685 Duganella sp. R-74599 Isolate Unclassified
9 2885080285 Janthinobacterium sp. AD80 Isolate Rhizosphere
10 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
11 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
12 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
13 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
14 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
15 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
16 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
17 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
18 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
19 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
20 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
21 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
22 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
23 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
24 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
25 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
26 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
27 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
28 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
29 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
30 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
31 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
32 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
43 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
44 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
52 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
53 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
54 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
55 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
56 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
57 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
60 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
61 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
62 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
65 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
84 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
85 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
86 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
90 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
91 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
99 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
100 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
101 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
104 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
105 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
106 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
107 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
108 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
109 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
110 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
111 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
112 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
113 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
114 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
115 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
116 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
117 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
118 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
119 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
120 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
121 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
122 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
123 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
124 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
125 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
126 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
127 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
128 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
129 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
130 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
131 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
132 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
133 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
134 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
135 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
136 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
137 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
138 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
139 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
140 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
141 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
142 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
143 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
148 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
149 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
150 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
151 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
152 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
153 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
154 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
155 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
156 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
157 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
159 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
163 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
164 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
167 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
168 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
169 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
171 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.88
Metatranscriptomes 0
Isolates 6.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.47
Nodule 0
Rhizoplane 1.8
Rhizosphere 73.74
Stem 0
Stem Tuber 0
Unclassified 8.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1000176 3300002738 Bacteria 49875
2 JGI25152J39213_1000082 3300002773 Bacteria 65365
3 JGI25150J39212_1001828 3300002774 Bacteria 5643
4 JGI25159J45721_1001281 3300002987 Bacteria 10622
5 Ga0055526_1000028 3300003771 Bacteria 150301
6 Ga0055526_1001664 3300003771 Bacteria 15587
7 Ga0055537_1000005 3300003773 Bacteria 160497
8 Ga0055524_1001374 3300003775 Bacteria 14124
9 Ga0055524_1006711 3300003775 Bacteria 4970
10 Ga0055534_1000127 3300003784 Bacteria 57100
11 Ga0055528_1000063 3300003790 Bacteria 85587
12 Ga0055543_1002454 3300004625 Bacteria 6121
13 Ga0065165_1000055 3300005262 Bacteria 187003
14 Ga0070670_100000002 3300005331 Bacteria 568775
15 Ga0070666_10001331 3300005335 Bacteria 14983
16 Ga0070682_100007197 3300005337 Bacteria 6271
17 Ga0070660_100039065 3300005339 Bacteria 3606
18 Ga0070661_100026918 3300005344 Bacteria 4139
19 Ga0070671_100000078 3300005355 Bacteria 61903
20 Ga0070667_100000394 3300005367 Bacteria 47270
21 Ga0070685_10000005 3300005466 Bacteria 190119
22 Ga0070665_100016423 3300005548 Bacteria 7423
23 Ga0068859_100059683 3300005617 Bacteria 3843
24 Ga0068864_100000003 3300005618 Bacteria 568775
25 Ga0068863_100770769 3300005841 Bacteria 958
26 Ga0068860_100000326 3300005843 Bacteria 64692
27 Ga0075365_10040445 3300006038 Bacteria 3040
28 Ga0075368_10003622 3300006042 Bacteria 5176
29 Ga0075363_100036718 3300006048 Bacteria 2571
30 Ga0075362_10025084 3300006177 Bacteria 2534
31 Ga0075367_10058680 3300006178 Bacteria 2290
32 Ga0075370_10206862 3300006353 Bacteria 1158
33 Ga0097620_100059683 3300006931 Bacteria 3843
34 Ga0105247_10004319 3300009101 Bacteria 9082
35 Ga0105248_10038980 3300009177 Bacteria 5320
36 Ga0105248_10331631 3300009177 Bacteria 1713
37 Ga0163163_10000136 3300014325 Bacteria 75532
38 Ga0182008_10000276 3300014497 Bacteria 40270
39 Ga0182006_1000129 3300015261 Bacteria 81237
40 Ga0182007_10000035 3300015262 Bacteria 132553
41 Ga0182005_1000001 3300015265 Bacteria 1014869
42 Ga0163161_10092787 3300017792 Bacteria 2236
43 Ga0213872_10000083 3300021361 Bacteria 87967
44 Ga0213872_10000395 3300021361 Bacteria 36297
45 Ga0213872_10000462 3300021361 Bacteria 33148
46 Ga0213872_10003339 3300021361 Bacteria 8940
47 Ga0209436_120796 3300025208 Bacteria 878
48 Ga0209566_100097 3300025225 Bacteria 135294
49 Ga0207425_1000001 3300025245 Bacteria 2525432
50 Ga0209646_1000054 3300025246 Bacteria 279447
51 Ga0209129_1000001 3300025258 Bacteria 1452436
52 Ga0209565_1000074 3300025263 Bacteria 164237
53 Ga0209565_1008199 3300025263 Bacteria 2753
54 Ga0209673_1000129 3300025273 Bacteria 164238
55 Ga0209130_1000091 3300025284 Bacteria 149502
56 Ga0209675_1000072 3300025291 Bacteria 164237
57 Ga0209564_1000011 3300025295 Bacteria 822327
58 Ga0209564_1000160 3300025295 Bacteria 164214
59 Ga0209758_1000055 3300025297 Bacteria 336183
60 Ga0209256_1000125 3300025299 Bacteria 165336
61 Ga0209256_1000269 3300025299 Bacteria 91493
62 Ga0207710_10003011 3300025900 Bacteria 7591
63 Ga0207680_10007691 3300025903 Bacteria 5266
64 Ga0207657_10054089 3300025919 Bacteria 3473
65 Ga0207650_10000003 3300025925 Bacteria 1123235
66 Ga0207644_10000190 3300025931 Bacteria 44248
67 Ga0207711_10084335 3300025941 Bacteria 2781
68 Ga0207679_10130117 3300025945 Bacteria 2018
69 Ga0207658_10000004 3300025986 Bacteria 569357
70 Ga0207641_10085627 3300026088 Bacteria 2746
71 Ga0207676_10000003 3300026095 Bacteria 1123235
72 Ga0268266_10014035 3300028379 Bacteria 6896
73 Ga0268264_10000123 3300028381 Bacteria 189361
74 Ga0307515_10122568 3300028794 Bacteria 2931
75 Ga0265314_10050179 3300031711 Bacteria 2916
76 Ga0373939_0006917 3300035114 Bacteria 2744
77 Ga0395899_0001060 3300037312 Bacteria 24820
78 Ga0395899_0002750 3300037312 Bacteria 14186
79 Ga0395899_0099857 3300037312 Unclassified 2096
80 Ga0395900_0336052 3300037418 Bacteria 1487
81 Ga0395898_0026263 3300037466 Bacteria 5862
82 Ga0395905_0018096 3300037471 Bacteria 6689
83 Ga0395901_0023208 3300038443 Bacteria 6359
84 Ga0436361_0288336 3300039447 Bacteria 47657
85 Ga0436361_0430954 3300039447 Bacteria 31622
86 Ga0436361_0695623 3300039447 Bacteria 37214
87 Ga0436361_0715492 3300039447 Bacteria 1196
88 Ga0436361_0787907 3300039447 Bacteria 13918
89 Ga0439458_0037188 3300042157 Bacteria 1173
90 Ga0466966_0032797 3300044684 Bacteria 3362
91 Ga0453684_0356086 3300044712 Bacteria 1649
92 Ga0466971_0007974 3300044719 Bacteria 4616
93 Ga0466970_0144102 3300044765 Bacteria 1313
94 Ga0466960_0031163 3300044901 Bacteria 2459
95 Ga0466960_0475551 3300044901 Bacteria 729
96 Ga0466959_0001306 3300045049 Bacteria 15108
97 Ga0466959_0021718 3300045049 Bacteria 4737
98 Ga0451576_1595749 3300045051 Bacteria 677
99 Ga0495617_000595 3300046452 Bacteria 18412
100 Ga0495617_001775 3300046452 Bacteria 9211
101 Ga0495627_000001 3300046453 Bacteria 1104709
102 Ga0495590_0000001 3300046457 Bacteria 762984
103 Ga0495590_0026866 3300046457 Bacteria 2020
104 Ga0495590_0072929 3300046457 Bacteria 1206
105 Ga0495591_087665 3300046458 Bacteria 785
106 Ga0495638_0000017 3300046460 Bacteria 391117
107 Ga0495638_0008154 3300046460 Bacteria 7446
108 Ga0495638_0044764 3300046460 Bacteria 2787
109 Ga0495638_0104825 3300046460 Bacteria 1686
110 Ga0495638_0202590 3300046460 Bacteria 1119
111 Ga0495653_0069230 3300046463 Bacteria 2645
112 Ga0495650_0000184 3300046471 Bacteria 136939
113 Ga0495650_0001648 3300046471 Bacteria 20669
114 Ga0495650_0002527 3300046471 Bacteria 14627
115 Ga0495605_0000023 3300046474 Bacteria 236732
116 Ga0495605_0002694 3300046474 Bacteria 10877
117 Ga0495605_0005044 3300046474 Bacteria 7715
118 Ga0495605_0163619 3300046474 Bacteria 986
119 Ga0495584_0014984 3300046491 Bacteria 3951
120 Ga0495585_0001226 3300046492 Bacteria 20771
121 Ga0495585_0026611 3300046492 Bacteria 3304
122 Ga0495585_0044315 3300046492 Bacteria 2485
123 Ga0495607_0004176 3300046501 Bacteria 10734
124 Ga0495607_0006814 3300046501 Bacteria 7974
125 Ga0495607_0014906 3300046501 Bacteria 5052
126 Ga0495583_0000067 3300046506 Bacteria 189381
127 Ga0495583_0000186 3300046506 Bacteria 105198
128 Ga0495583_0051355 3300046506 Bacteria 1880
129 Ga0495606_0000015 3300046507 Bacteria 288808
130 Ga0495606_0000062 3300046507 Bacteria 184841
131 Ga0495606_0010497 3300046507 Bacteria 7674
132 Ga0495606_0028934 3300046507 Bacteria 3899
133 Ga0495610_0015506 3300046512 Bacteria 4424
134 Ga0495610_0023467 3300046512 Bacteria 3352
135 Ga0495610_0029839 3300046512 Bacteria 2864
136 Ga0495616_0006848 3300046513 Bacteria 6865
137 Ga0495616_0010114 3300046513 Bacteria 5473
138 Ga0495637_0000359 3300046520 Bacteria 34711
139 Ga0495637_0007404 3300046520 Bacteria 5438
140 Ga0495643_0000044 3300046522 Bacteria 226211
141 Ga0495643_0000194 3300046522 Bacteria 96362
142 Ga0495643_0031767 3300046522 Bacteria 2936
143 Ga0495648_0000001 3300046524 Bacteria 696872
144 Ga0495648_0000573 3300046524 Bacteria 39404
145 Ga0495648_0033671 3300046524 Bacteria 3343
146 Ga0495648_0051313 3300046524 Bacteria 2514
147 Ga0495642_0004506 3300046528 Bacteria 5409
148 Ga0495642_0012681 3300046528 Bacteria 3252
149 Ga0495654_0000076 3300046530 Bacteria 113516
150 Ga0495609_0000127 3300046538 Bacteria 82467
151 Ga0495609_0002886 3300046538 Bacteria 10255
152 Ga0495609_0004082 3300046538 Bacteria 8131
153 Ga0495609_0090185 3300046538 Bacteria 1333
154 Ga0495597_0000115 3300046542 Bacteria 72325
155 Ga0495597_0001756 3300046542 Bacteria 14923
156 Ga0495597_0002529 3300046542 Bacteria 11475
157 Ga0495622_0000159 3300046557 Bacteria 56651
158 Ga0495622_0159158 3300046557 Bacteria 1019
159 Ga0495633_0000248 3300046558 Bacteria 64518
160 Ga0495633_0000386 3300046558 Bacteria 46470
161 Ga0495633_0000446 3300046558 Bacteria 42633
162 Ga0495633_0000753 3300046558 Bacteria 29207
163 Ga0495633_0004612 3300046558 Bacteria 8677
164 Ga0495633_0005254 3300046558 Bacteria 7985
165 Ga0495668_0000091 3300046616 Bacteria 144428
166 Ga0495668_0000488 3300046616 Bacteria 49638
167 Ga0495668_0000545 3300046616 Bacteria 46746
168 Ga0495668_0001137 3300046616 Bacteria 27257
169 Ga0495668_0003206 3300046616 Bacteria 12503
170 Ga0495611_0000629 3300046648 Bacteria 20301
171 Ga0495611_0061730 3300046648 Bacteria 1704
172 Ga0495625_0000065 3300046660 Bacteria 173230
173 Ga0495625_0000824 3300046660 Bacteria 42730
174 Ga0495625_0020630 3300046660 Bacteria 5082
175 Ga0495625_0038343 3300046660 Bacteria 3509
176 Ga0495625_0044743 3300046660 Bacteria 3203
177 Ga0495625_0143371 3300046660 Bacteria 1610
178 Ga0495625_0202265 3300046660 Bacteria 1310
179 Ga0495659_0000073 3300046664 Bacteria 42850
180 Ga0495659_0000513 3300046664 Bacteria 14254
181 Ga0495659_0002573 3300046664 Bacteria 5848
182 Ga0495661_0004907 3300046665 Bacteria 9575
183 Ga0495661_0027681 3300046665 Bacteria 3636
184 Ga0495669_0002142 3300046684 Bacteria 8104
185 Ga0495670_0000436 3300046691 Bacteria 19937
186 Ga0495671_0000006 3300046692 Bacteria 500471
187 Ga0495671_0000309 3300046692 Bacteria 41290
188 Ga0495671_0013495 3300046692 Bacteria 4418
189 Ga0495671_0021391 3300046692 Bacteria 3399
190 Ga0495671_0105486 3300046692 Bacteria 1376
191 Ga0495649_0004986 3300046694 Bacteria 8535
192 Ga0495649_0041307 3300046694 Bacteria 2523
193 Ga0495649_0050655 3300046694 Bacteria 2253
194 Ga0495649_0178132 3300046694 Bacteria 1110
195 Ga0495589_0002653 3300046794 Bacteria 9903
196 Ga0495660_0040678 3300046810 Bacteria 2575
197 Ga0495660_0077922 3300046810 Bacteria 1743
198 Ga0495636_0000164 3300047318 Bacteria 26660
199 Ga0495636_0001397 3300047318 Bacteria 9114
200 Ga0495672_0000170 3300047320 Bacteria 94669
201 Ga0495672_0002257 3300047320 Bacteria 17922
202 Ga0495672_0003403 3300047320 Bacteria 13652
203 Ga0495672_0014757 3300047320 Bacteria 5330
204 Ga0495683_0023749 3300047323 Bacteria 3150
205 Ga0495687_000065 3300047443 Bacteria 162721
206 Ga0495687_000479 3300047443 Bacteria 48416
207 Ga0495687_000540 3300047443 Bacteria 45132
208 Ga0495687_029948 3300047443 Bacteria 2511
209 Ga0495677_0001428 3300047445 Bacteria 9581
210 Ga0495679_009145 3300047446 Bacteria 3985
211 Ga0495679_026889 3300047446 Bacteria 1905
212 Ga0495685_000387 3300047447 Bacteria 13935
213 Ga0495673_0000003 3300047469 Bacteria 1491337
214 Ga0495673_0000015 3300047469 Bacteria 598766
215 Ga0495673_0086485 3300047469 Bacteria 1288
216 Ga0495681_0003938 3300047470 Bacteria 10234
217 Ga0495686_0001173 3300047472 Bacteria 30578
218 Ga0495686_0001847 3300047472 Bacteria 21264
219 Ga0495686_0035398 3300047472 Bacteria 3210
220 Ga0495686_0066262 3300047472 Bacteria 2231
221 Ga0496107_0110960 3300048910 Bacteria 2016
222 Ga0496109_0095198 3300048912 Bacteria 2757
223 Ga0496110_0923243 3300048913 Bacteria 779
224 Ga0496111_0017223 3300048914 Bacteria 4993
225 Ga0496116_0016432 3300048919 Bacteria 5790
226 Ga0496116_0021591 3300048919 Bacteria 4849
227 Ga0496117_0000001 3300048920 Bacteria 2526244
228 Ga0496118_0000002 3300048921 Bacteria 1690764
229 Ga0496121_0001085 3300048924 Bacteria 48050
230 Ga0496121_0013877 3300048924 Bacteria 8617
231 Ga0496122_0003364 3300048925 Bacteria 21069
232 Ga0496124_0020490 3300048927 Bacteria 6107
233 Ga0496124_0099585 3300048927 Bacteria 2357
234 Ga0496124_0158355 3300048927 Bacteria 1768
235 Ga0496124_0515108 3300048927 Bacteria 798
236 Ga0496125_0033086 3300048928 Bacteria 4582
237 Ga0496125_0127259 3300048928 Bacteria 1802
238 Ga0496126_0006809 3300048929 Bacteria 12679
239 Ga0496126_0028487 3300048929 Bacteria 5320
240 Ga0495678_000004 3300049459 Bacteria 532920
241 Ga0495678_001219 3300049459 Bacteria 21082
242 Ga0495678_005005 3300049459 Bacteria 7465
243 Ga0495678_015969 3300049459 Bacteria 3445
244 Ga0495678_059153 3300049459 Bacteria 1445
245 Ga0495682_0000259 3300049460 Bacteria 42010
246 Ga0495682_0006250 3300049460 Bacteria 4840
247 Ga0495682_0036071 3300049460 Bacteria 1821
248 Ga0501034_0776463 3300049571 Bacteria 852
249 Ga0501083_0101480 3300049744 Bacteria 1897
250 nmdc:mga03683_38471_c1 3300050489 Bacteria 1954
251 nmdc:mga03n38_27359_c1 3300050490 Bacteria 2365
252 nmdc:mga00v17_32249_c1 3300050491 Bacteria 3096
253 nmdc:mga0yw44_4531_c1 3300050492 Bacteria 6393
254 nmdc:mga0k408_31641_c1 3300050493 Bacteria 3022
255 nmdc:mga06z11_8447_c1 3300050494 Bacteria 4294
256 nmdc:mga07m45_52517_c2 3300050496 Bacteria 1994
257 Ga0500594_0006845 3300053118 Bacteria 2568
258 Ga0500618_000140 3300053125 Bacteria 60531
259 Ga0500586_003145 3300053145 Bacteria 3857
260 Ga0500636_0107145 3300053177 Bacteria 1583
261 Ga0466962_0149307 3300061719 Bacteria 1134

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_1595749 Ga0451576_1595749_18_605 191
2 3300042157 Ga0439458_0037188 Ga0439458_0037188_18_650 210
3 3300046474 Ga0495605_0163619 Ga0495605_0163619_59_691 210
4 3300046501 Ga0495607_0006814 Ga0495607_0006814_1776_2408 210
5 3300046506 Ga0495583_0051355 Ga0495583_0051355_830_1462 210
6 3300046528 Ga0495642_0012681 Ga0495642_0012681_1806_2438 210
7 3300046538 Ga0495609_0000127 Ga0495609_0000127_57772_58404 210
8 3300046616 Ga0495668_0001137 Ga0495668_0001137_17785_18417 210
9 3300046660 Ga0495625_0000824 Ga0495625_0000824_7525_8157 210
10 3300046664 Ga0495659_0002573 Ga0495659_0002573_603_1235 210
11 3300046684 Ga0495669_0002142 Ga0495669_0002142_4753_5385 210
12 3300046692 Ga0495671_0021391 Ga0495671_0021391_1842_2474 210
13 3300046694 Ga0495649_0004986 Ga0495649_0004986_1519_2151 210
14 3300046694 Ga0495649_0041307 Ga0495649_0041307_367_999 210
15 3300046810 Ga0495660_0077922 Ga0495660_0077922_631_1263 210
16 3300047318 Ga0495636_0001397 Ga0495636_0001397_7653_8285 210
17 3300047443 Ga0495687_029948 Ga0495687_029948_1492_2124 210
18 3300047445 Ga0495677_0001428 Ga0495677_0001428_7431_8063 210
19 3300047446 Ga0495679_009145 Ga0495679_009145_1200_1832 210
20 3300047470 Ga0495681_0003938 Ga0495681_0003938_6098_6730 210
21 3300046557 Ga0495622_0159158 Ga0495622_0159158_215_907 213
22 iso_pu_bacteria 2671180330 2672336094 213
23 iso_pu_bacteria 2600255292 2601668925 216
24 iso_pu_bacteria 2738541280 2738741531 216
25 iso_pu_bacteria 2857472729 2857474901 216
26 iso_pu_bacteria 2857547612 2857551637 216
27 iso_pu_bacteria 2857558681 2857560202 216
28 iso_pu_bacteria 2857564685 2857566621 216
29 iso_pu_bacteria 2885080285 2885083360 216
30 iso_pu_bacteria 2904755435 2904757858 216
31 iso_pu_bacteria 2932410948 2932416510 216
32 iso_pu_bacteria 2932416698 2932417090 216
33 iso_pu_bacteria 2938649242 2938652932 216
34 iso_pu_bacteria 2968558590 2968558927 216
35 iso_pu_bacteria 2988225383 2988227054 216
36 iso_pu_bacteria 2996632988 2996633078 216
37 iso_pu_bacteria 8054280661 8054282326 216
38 3300046457 Ga0495590_0026866 Ga0495590_0026866_1243_1896 217
39 3300046458 Ga0495591_087665 Ga0495591_087665_66_722 217
40 3300046460 Ga0495638_0008154 Ga0495638_0008154_4382_5035 217
41 3300046474 Ga0495605_0002694 Ga0495605_0002694_3388_4041 217
42 3300046474 Ga0495605_0005044 Ga0495605_0005044_3439_4095 217
43 3300046491 Ga0495584_0014984 Ga0495584_0014984_2093_2746 217
44 3300046492 Ga0495585_0001226 Ga0495585_0001226_8274_8930 217
45 3300046492 Ga0495585_0044315 Ga0495585_0044315_368_1021 217
46 3300046506 Ga0495583_0000067 Ga0495583_0000067_146209_146862 217
47 3300046513 Ga0495616_0010114 Ga0495616_0010114_3612_4265 217
48 3300046524 Ga0495648_0000573 Ga0495648_0000573_18671_19324 217
49 3300046538 Ga0495609_0004082 Ga0495609_0004082_2457_3110 217
50 3300046538 Ga0495609_0090185 Ga0495609_0090185_76_732 217
51 3300046648 Ga0495611_0000629 Ga0495611_0000629_7440_8096 217
52 3300046648 Ga0495611_0061730 Ga0495611_0061730_60_716 217
53 3300046660 Ga0495625_0020630 Ga0495625_0020630_218_871 217
54 3300046664 Ga0495659_0000513 Ga0495659_0000513_13580_14233 217
55 3300046665 Ga0495661_0004907 Ga0495661_0004907_8588_9244 217
56 3300046665 Ga0495661_0027681 Ga0495661_0027681_2135_2791 217
57 3300046692 Ga0495671_0013495 Ga0495671_0013495_2457_3110 217
58 3300046794 Ga0495589_0002653 Ga0495589_0002653_3466_4122 217
59 3300047318 Ga0495636_0000164 Ga0495636_0000164_11047_11700 217
60 3300047320 Ga0495672_0002257 Ga0495672_0002257_3394_4047 217
61 3300047320 Ga0495672_0014757 Ga0495672_0014757_505_1158 217
62 3300047323 Ga0495683_0023749 Ga0495683_0023749_605_1258 217
63 3300047443 Ga0495687_000479 Ga0495687_000479_19108_19761 217
64 3300047446 Ga0495679_026889 Ga0495679_026889_564_1217 217
65 3300047447 Ga0495685_000387 Ga0495685_000387_4160_4813 217
66 3300047469 Ga0495673_0086485 Ga0495673_0086485_50_703 217
67 3300049459 Ga0495678_001219 Ga0495678_001219_9878_10531 217
68 3300049460 Ga0495682_0006250 Ga0495682_0006250_368_1021 217
69 3300002773 JGI25152J39213_1000082 JGI25152J39213_100008243 219
70 3300002774 JGI25150J39212_1001828 JGI25150J39212_10018285 219
71 3300002987 JGI25159J45721_1001281 JGI25159J45721_10012813 219
72 3300003775 Ga0055524_1001374 Ga0055524_10013742 219
73 3300004625 Ga0055543_1002454 Ga0055543_10024544 219
74 3300005262 Ga0065165_1000055 Ga0065165_1000055185 219
75 3300006038 Ga0075365_10040445 Ga0075365_100404453 219
76 3300006042 Ga0075368_10003622 Ga0075368_100036224 219
77 3300006048 Ga0075363_100036718 Ga0075363_1000367183 219
78 3300006177 Ga0075362_10025084 Ga0075362_100250843 219
79 3300006178 Ga0075367_10058680 Ga0075367_100586803 219
80 3300006353 Ga0075370_10206862 Ga0075370_102068623 219
81 3300021361 Ga0213872_10000083 Ga0213872_1000008349 219
82 3300021361 Ga0213872_10000462 Ga0213872_1000046226 219
83 3300025208 Ga0209436_120796 Ga0209436_1207962 219
84 3300025245 Ga0207425_1000001 Ga0207425_10000012154 219
85 3300025258 Ga0209129_1000001 Ga0209129_10000011331 219
86 3300025263 Ga0209565_1008199 Ga0209565_10081993 219
87 3300025284 Ga0209130_1000091 Ga0209130_1000091146 219
88 3300025297 Ga0209758_1000055 Ga0209758_1000055198 219
89 3300025299 Ga0209256_1000269 Ga0209256_100026980 219
90 3300039447 Ga0436361_0288336 Ga0436361_0288336_22630_23292 219
91 3300039447 Ga0436361_0430954 Ga0436361_0430954_1667_2326 219
92 3300046452 Ga0495617_001775 Ga0495617_001775_1426_2085 219
93 3300046492 Ga0495585_0026611 Ga0495585_0026611_1438_2097 219
94 3300046501 Ga0495607_0004176 Ga0495607_0004176_7736_8395 219
95 3300046507 Ga0495606_0000015 Ga0495606_0000015_30111_30773 219
96 3300046513 Ga0495616_0006848 Ga0495616_0006848_3274_3933 219
97 3300046558 Ga0495633_0000753 Ga0495633_0000753_9232_9891 219
98 3300046558 Ga0495633_0004612 Ga0495633_0004612_3567_4226 219
99 3300046691 Ga0495670_0000436 Ga0495670_0000436_12064_12723 219
100 3300046692 Ga0495671_0000006 Ga0495671_0000006_323286_323945 219
101 3300047472 Ga0495686_0066262 Ga0495686_0066262_911_1573 219
102 3300048929 Ga0496126_0006809 Ga0496126_0006809_3877_4554 219
103 3300049460 Ga0495682_0000259 Ga0495682_0000259_16041_16700 219
104 3300050489 nmdc:mga03683_38471_c1 nmdc:mga03683_38471_c1_482_1141 219
105 3300050490 nmdc:mga03n38_27359_c1 nmdc:mga03n38_27359_c1_779_1438 219
106 3300050491 nmdc:mga00v17_32249_c1 nmdc:mga00v17_32249_c1_1235_1894 219
107 3300050492 nmdc:mga0yw44_4531_c1 nmdc:mga0yw44_4531_c1_970_1629 219
108 3300050493 nmdc:mga0k408_31641_c1 nmdc:mga0k408_31641_c1_753_1412 219
109 3300050494 nmdc:mga06z11_8447_c1 nmdc:mga06z11_8447_c1_843_1502 219
110 3300050496 nmdc:mga07m45_52517_c2 nmdc:mga07m45_52517_c2_1296_1955 219
111 3300053118 Ga0500594_0006845 Ga0500594_0006845_1425_2162 219
112 3300053125 Ga0500618_000140 Ga0500618_000140_54037_54696 219
113 3300002738 JGI25154J39366_1000176 JGI25154J39366_100017624 220
114 3300003771 Ga0055526_1000028 Ga0055526_100002861 220
115 3300003771 Ga0055526_1001664 Ga0055526_10016648 220
116 3300003773 Ga0055537_1000005 Ga0055537_100000551 220
117 3300003775 Ga0055524_1006711 Ga0055524_10067112 220
118 3300003784 Ga0055534_1000127 Ga0055534_100012731 220
119 3300003790 Ga0055528_1000063 Ga0055528_100006351 220
120 3300005331 Ga0070670_100000002 Ga0070670_100000002504 220
121 3300005335 Ga0070666_10001331 Ga0070666_1000133110 220
122 3300005337 Ga0070682_100007197 Ga0070682_1000071973 220
123 3300005339 Ga0070660_100039065 Ga0070660_1000390653 220
124 3300005344 Ga0070661_100026918 Ga0070661_1000269183 220
125 3300005355 Ga0070671_100000078 Ga0070671_10000007816 220
126 3300005367 Ga0070667_100000394 Ga0070667_10000039437 220
127 3300005466 Ga0070685_10000005 Ga0070685_10000005128 220
128 3300005548 Ga0070665_100016423 Ga0070665_1000164234 220
129 3300005617 Ga0068859_100059683 Ga0068859_1000596832 220
130 3300005618 Ga0068864_100000003 Ga0068864_100000003517 220
131 3300005841 Ga0068863_100770769 Ga0068863_1007707692 220
132 3300005843 Ga0068860_100000326 Ga0068860_10000032660 220
133 3300006931 Ga0097620_100059683 Ga0097620_1000596832 220
134 3300009101 Ga0105247_10004319 Ga0105247_100043197 220
135 3300009177 Ga0105248_10038980 Ga0105248_100389803 220
136 3300009177 Ga0105248_10331631 Ga0105248_103316312 220
137 3300014325 Ga0163163_10000136 Ga0163163_1000013643 220
138 3300014497 Ga0182008_10000276 Ga0182008_1000027618 220
139 3300015261 Ga0182006_1000129 Ga0182006_100012954 220
140 3300015262 Ga0182007_10000035 Ga0182007_1000003513 220
141 3300015265 Ga0182005_1000001 Ga0182005_1000001194 220
142 3300017792 Ga0163161_10092787 Ga0163161_100927872 220
143 3300021361 Ga0213872_10000395 Ga0213872_1000039516 220
144 3300021361 Ga0213872_10003339 Ga0213872_100033394 220
145 3300025225 Ga0209566_100097 Ga0209566_10009734 220
146 3300025246 Ga0209646_1000054 Ga0209646_100005414 220
147 3300025263 Ga0209565_1000074 Ga0209565_1000074104 220
148 3300025273 Ga0209673_1000129 Ga0209673_100012957 220
149 3300025291 Ga0209675_1000072 Ga0209675_100007257 220
150 3300025295 Ga0209564_1000011 Ga0209564_1000011507 220
151 3300025295 Ga0209564_1000160 Ga0209564_100016056 220
152 3300025299 Ga0209256_1000125 Ga0209256_100012557 220
153 3300025900 Ga0207710_10003011 Ga0207710_1000301110 220
154 3300025903 Ga0207680_10007691 Ga0207680_100076914 220
155 3300025919 Ga0207657_10054089 Ga0207657_100540893 220
156 3300025925 Ga0207650_10000003 Ga0207650_100000031051 220
157 3300025931 Ga0207644_10000190 Ga0207644_1000019045 220
158 3300025941 Ga0207711_10084335 Ga0207711_100843353 220
159 3300025945 Ga0207679_10130117 Ga0207679_101301173 220
160 3300025986 Ga0207658_10000004 Ga0207658_10000004498 220
161 3300026088 Ga0207641_10085627 Ga0207641_100856272 220
162 3300026095 Ga0207676_10000003 Ga0207676_1000000343 220
163 3300028379 Ga0268266_10014035 Ga0268266_100140352 220
164 3300028381 Ga0268264_10000123 Ga0268264_1000012354 220
165 3300028794 Ga0307515_10122568 Ga0307515_101225682 220
166 3300031711 Ga0265314_10050179 Ga0265314_100501792 220
167 3300035114 Ga0373939_0006917 Ga0373939_0006917_1966_2628 220
168 3300037312 Ga0395899_0001060 Ga0395899_0001060_23034_23696 220
169 3300037312 Ga0395899_0002750 Ga0395899_0002750_10009_10671 220
170 3300037312 Ga0395899_0099857 Ga0395899_0099857_521_1255 220
171 3300037418 Ga0395900_0336052 Ga0395900_0336052_417_1079 220
172 3300037466 Ga0395898_0026263 Ga0395898_0026263_146_808 220
173 3300037471 Ga0395905_0018096 Ga0395905_0018096_5488_6150 220
174 3300038443 Ga0395901_0023208 Ga0395901_0023208_655_1317 220
175 3300039447 Ga0436361_0695623 Ga0436361_0695623_5666_6340 220
176 3300039447 Ga0436361_0715492 Ga0436361_0715492_336_998 220
177 3300039447 Ga0436361_0787907 Ga0436361_0787907_5633_6307 220
178 3300044684 Ga0466966_0032797 Ga0466966_0032797_103_765 220
179 3300044712 Ga0453684_0356086 Ga0453684_0356086_532_1197 220
180 3300044719 Ga0466971_0007974 Ga0466971_0007974_1786_2448 220
181 3300044765 Ga0466970_0144102 Ga0466970_0144102_344_1006 220
182 3300044901 Ga0466960_0031163 Ga0466960_0031163_15_677 220
183 3300044901 Ga0466960_0475551 Ga0466960_0475551_19_681 220
184 3300045049 Ga0466959_0001306 Ga0466959_0001306_4826_5518 220
185 3300045049 Ga0466959_0021718 Ga0466959_0021718_985_1647 220
186 3300046452 Ga0495617_000595 Ga0495617_000595_537_1214 220
187 3300046453 Ga0495627_000001 Ga0495627_000001_70314_70976 220
188 3300046457 Ga0495590_0000001 Ga0495590_0000001_323077_323742 220
189 3300046457 Ga0495590_0072929 Ga0495590_0072929_374_1102 220
190 3300046460 Ga0495638_0000017 Ga0495638_0000017_44563_45228 220
191 3300046460 Ga0495638_0044764 Ga0495638_0044764_1531_2193 220
192 3300046460 Ga0495638_0104825 Ga0495638_0104825_318_1004 220
193 3300046460 Ga0495638_0202590 Ga0495638_0202590_20_697 220
194 3300046463 Ga0495653_0069230 Ga0495653_0069230_791_1618 220
195 3300046471 Ga0495650_0000184 Ga0495650_0000184_1925_2587 220
196 3300046471 Ga0495650_0001648 Ga0495650_0001648_9075_9761 220
197 3300046471 Ga0495650_0002527 Ga0495650_0002527_8101_8766 220
198 3300046474 Ga0495605_0000023 Ga0495605_0000023_88656_89318 220
199 3300046501 Ga0495607_0014906 Ga0495607_0014906_3023_3685 220
200 3300046506 Ga0495583_0000186 Ga0495583_0000186_91830_92495 220
201 3300046507 Ga0495606_0000062 Ga0495606_0000062_38871_39533 220
202 3300046507 Ga0495606_0010497 Ga0495606_0010497_6355_7053 220
203 3300046507 Ga0495606_0028934 Ga0495606_0028934_1679_2356 220
204 3300046512 Ga0495610_0015506 Ga0495610_0015506_1738_2436 220
205 3300046512 Ga0495610_0023467 Ga0495610_0023467_1291_1968 220
206 3300046512 Ga0495610_0029839 Ga0495610_0029839_1244_1906 220
207 3300046520 Ga0495637_0000359 Ga0495637_0000359_33600_34286 220
208 3300046520 Ga0495637_0007404 Ga0495637_0007404_780_1457 220
209 3300046522 Ga0495643_0000044 Ga0495643_0000044_91438_92100 220
210 3300046522 Ga0495643_0000194 Ga0495643_0000194_94255_94932 220
211 3300046522 Ga0495643_0031767 Ga0495643_0031767_2216_2878 220
212 3300046524 Ga0495648_0000001 Ga0495648_0000001_531861_532526 220
213 3300046524 Ga0495648_0033671 Ga0495648_0033671_1349_2026 220
214 3300046524 Ga0495648_0051313 Ga0495648_0051313_424_1101 220
215 3300046528 Ga0495642_0004506 Ga0495642_0004506_3678_4343 220
216 3300046530 Ga0495654_0000076 Ga0495654_0000076_36638_37324 220
217 3300046538 Ga0495609_0002886 Ga0495609_0002886_5964_6626 220
218 3300046542 Ga0495597_0000115 Ga0495597_0000115_11968_12630 220
219 3300046542 Ga0495597_0001756 Ga0495597_0001756_13165_13827 220
220 3300046542 Ga0495597_0002529 Ga0495597_0002529_8399_9088 220
221 3300046557 Ga0495622_0000159 Ga0495622_0000159_11414_12079 220
222 3300046558 Ga0495633_0000248 Ga0495633_0000248_43822_44487 220
223 3300046558 Ga0495633_0000386 Ga0495633_0000386_5285_5962 220
224 3300046558 Ga0495633_0000446 Ga0495633_0000446_31670_32335 220
225 3300046558 Ga0495633_0005254 Ga0495633_0005254_5673_6371 220
226 3300046616 Ga0495668_0000091 Ga0495668_0000091_62139_62801 220
227 3300046616 Ga0495668_0000488 Ga0495668_0000488_5520_6182 220
228 3300046616 Ga0495668_0000545 Ga0495668_0000545_36305_36970 220
229 3300046616 Ga0495668_0003206 Ga0495668_0003206_10516_11178 220
230 3300046660 Ga0495625_0000065 Ga0495625_0000065_164195_164860 220
231 3300046660 Ga0495625_0038343 Ga0495625_0038343_1409_2107 220
232 3300046660 Ga0495625_0044743 Ga0495625_0044743_1731_2408 220
233 3300046660 Ga0495625_0143371 Ga0495625_0143371_332_994 220
234 3300046660 Ga0495625_0202265 Ga0495625_0202265_24_686 220
235 3300046664 Ga0495659_0000073 Ga0495659_0000073_29380_30069 220
236 3300046692 Ga0495671_0000309 Ga0495671_0000309_7307_7984 220
237 3300046692 Ga0495671_0105486 Ga0495671_0105486_123_800 220
238 3300046694 Ga0495649_0050655 Ga0495649_0050655_270_932 220
239 3300046694 Ga0495649_0178132 Ga0495649_0178132_229_906 220
240 3300046810 Ga0495660_0040678 Ga0495660_0040678_1223_1885 220
241 3300047320 Ga0495672_0000170 Ga0495672_0000170_1324_2001 220
242 3300047320 Ga0495672_0003403 Ga0495672_0003403_5844_6521 220
243 3300047443 Ga0495687_000065 Ga0495687_000065_148002_148667 220
244 3300047443 Ga0495687_000540 Ga0495687_000540_18958_19620 220
245 3300047469 Ga0495673_0000003 Ga0495673_0000003_91031_91693 220
246 3300047469 Ga0495673_0000015 Ga0495673_0000015_365850_366527 220
247 3300047472 Ga0495686_0001173 Ga0495686_0001173_19919_20581 220
248 3300047472 Ga0495686_0001847 Ga0495686_0001847_8009_8671 220
249 3300047472 Ga0495686_0035398 Ga0495686_0035398_457_1119 220
250 3300048910 Ga0496107_0110960 Ga0496107_0110960_1035_1697 220
251 3300048912 Ga0496109_0095198 Ga0496109_0095198_1560_2240 220
252 3300048913 Ga0496110_0923243 Ga0496110_0923243_77_757 220
253 3300048914 Ga0496111_0017223 Ga0496111_0017223_2402_3067 220
254 3300048919 Ga0496116_0016432 Ga0496116_0016432_2040_2702 220
255 3300048919 Ga0496116_0021591 Ga0496116_0021591_3574_4239 220
256 3300048920 Ga0496117_0000001 Ga0496117_0000001_25511_26176 220
257 3300048921 Ga0496118_0000002 Ga0496118_0000002_25511_26176 220
258 3300048924 Ga0496121_0001085 Ga0496121_0001085_42933_43598 220
259 3300048924 Ga0496121_0013877 Ga0496121_0013877_3473_4138 220
260 3300048925 Ga0496122_0003364 Ga0496122_0003364_2387_3052 220
261 3300048927 Ga0496124_0020490 Ga0496124_0020490_4423_5085 220
262 3300048927 Ga0496124_0099585 Ga0496124_0099585_55_720 220
263 3300048927 Ga0496124_0158355 Ga0496124_0158355_693_1358 220
264 3300048927 Ga0496124_0515108 Ga0496124_0515108_57_719 220
265 3300048928 Ga0496125_0033086 Ga0496125_0033086_3383_4045 220
266 3300048928 Ga0496125_0127259 Ga0496125_0127259_671_1399 220
267 3300048929 Ga0496126_0028487 Ga0496126_0028487_4153_4815 220
268 3300049459 Ga0495678_000004 Ga0495678_000004_286836_287582 220
269 3300049459 Ga0495678_005005 Ga0495678_005005_6150_6812 220
270 3300049459 Ga0495678_015969 Ga0495678_015969_1405_2082 220
271 3300049459 Ga0495678_059153 Ga0495678_059153_429_1091 220
272 3300049460 Ga0495682_0036071 Ga0495682_0036071_406_1083 220
273 3300049571 Ga0501034_0776463 Ga0501034_0776463_180_842 220
274 3300049744 Ga0501083_0101480 Ga0501083_0101480_616_1317 220
275 3300053145 Ga0500586_003145 Ga0500586_003145_2616_3314 220
276 3300053177 Ga0500636_0107145 Ga0500636_0107145_421_1086 220
277 3300061719 Ga0466962_0149307 Ga0466962_0149307_252_914 220
278 iso_pu_bacteria 2842711865 2842713666 220

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

31

141

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

173

244

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6is2-assembly1.cif.gz_A crystal structure of staphylococcus aureus response regulator arlr receiver domain in complex with mg 0.9827 1 118
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9771 2 118
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.9767 2 120
5uic-assembly1.cif.gz_A structure of the francisella response regulator receiver domain, qseb 0.975 1 118
3nnn-assembly1.cif.gz_B bef3 activated drrd receiver domain 0.9748 2 118
ID Description Score Start End Superfamily
af_P52076_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9813 1 80 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9768 1 80 3.40.50.2300
af_P30843_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9741 1 80 3.40.50.2300
af_Q9KJN4_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9739 1 80 3.40.50.2300
af_Q2FY79_1_81_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9728 2 80 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2A4RET6-F1-model_v4 DNA-binding response regulator 0.9826 2 118 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A1F9VDU4-F1-model_v4 Response regulatory domain-containing protein 0.9779 2 115 GO:0000160
GO:0003677
AF-A0A3C0Z4C2-F1-model_v4 DNA-binding response regulator 0.9758 1 118 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7V5X281-F1-model_v4 Sigma-54-dependent Fis family transcriptional regulator 0.9728 2 109 GO:0000160
GO:0005524
GO:0006355
GO:0016887
GO:0043565
AF-A0A1Y5TT72-F1-model_v4 Transcriptional regulatory protein AfsQ1 0.9719 2 118 GO:0000160

Feature Viewer

pLDDT pTM Quality
89.2 0.74 High
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Predicted Structure (AlphaFold2)

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