F382342

General Info

Members Datasets Scaffolds Average Seq Length
278 146 556 482

Family's Representative Sequence

Representative Sequence 3300007265|Ga0099794_10000124|Ga0099794_1000012425
Length 498
Sequence VRALIRELVVRVIQRVGNWFEQRLQLTGTIKHTMAHPVPRRTASWFYVFGSAALTVFLLQLVTGILLAIVYVPSAGEAWSSLQALNTQISAGWFIRALHGWGSNFMLAIVVIHMVQVFLFGAHKYPRELTWIVGVFLLLMTLGMAFTGQVLRFDQDAYWGLGIGTSIVSRVPVLGPPLVSLLLGGPIIAAATLSRFFALHVFVIPGALIAFVGIHLLLVLKLGINEWPMPGRIVRRATYLQEYHELTERDGVPFVPGAIVKDLFFSAAILLSIAVCAFVLGPFGPGGQPDPTIIQTAPRPDFFFLWLYALLSLLPPSSETPILLIGPAIALIALIGLPFVAGQGEKSWRRRPIAVLTILLIAVGLGALTRLALHTPWSPVMDAWSGLPIPTKYLVGRSPLERQGALVFQSKQCRNCHSLGDTGGQRGPALDQVAVRLTQDQLIRQVIQGGGNMPAYGNNLSPPQTTALVAFLQTLHPIGQAPARDASQTELSKLGLGP

Samples

Sample ID Description Type Environment
1 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
48 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
49 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
50 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
64 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
72 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
73 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
107 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
108 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
122 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
126 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
127 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
128 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
129 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
130 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
133 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
134 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
135 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
138 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
142 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
143 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
144 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.92
Metatranscriptomes 1.08
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.72
Rhizosphere 98.56
Stem 0
Stem Tuber 0
Unclassified 14.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099794_10000124 3300007265 Bacteria 28227
2 LJNas_1000024 3300000546 Bacteria 19941
3 JGI25406J46586_10003820 3300003203 Bacteria 7037
4 Ga0070690_100004059 3300005330 Bacteria 8103
5 Ga0068869_100002037 3300005334 Bacteria 12144
6 Ga0068869_100056479 3300005334 Bacteria 2863
7 Ga0070666_10001174 3300005335 Bacteria 15897
8 Ga0068868_100097121 3300005338 Bacteria 2380
9 Ga0070687_100030770 3300005343 Bacteria 2626
10 Ga0070668_100018875 3300005347 Bacteria 5181
11 Ga0070669_100029735 3300005353 Bacteria 3941
12 Ga0070675_100010950 3300005354 Bacteria 7097
13 Ga0070671_100020592 3300005355 Bacteria 5381
14 Ga0070659_100114722 3300005366 Unclassified 2177
15 Ga0070667_100006619 3300005367 Bacteria 9631
16 Ga0070709_10019516 3300005434 Bacteria 3921
17 Ga0070713_100014242 3300005436 Bacteria 5897
18 Ga0070713_100018600 3300005436 Bacteria 5282
19 Ga0070711_100001028 3300005439 Bacteria 14831
20 Ga0070711_100030526 3300005439 Bacteria 3569
21 Ga0070708_100000327 3300005445 Bacteria 35749
22 Ga0070708_100003401 3300005445 Bacteria 12461
23 Ga0070708_100004425 3300005445 Bacteria 11039
24 Ga0070708_100007629 3300005445 Bacteria 8666
25 Ga0070708_100011196 3300005445 Bacteria 7295
26 Ga0070708_100014938 3300005445 Bacteria 6402
27 Ga0070708_100015552 3300005445 Bacteria 6289
28 Ga0070708_100024298 3300005445 Bacteria 5167
29 Ga0070708_100055662 3300005445 Bacteria 3517
30 Ga0070708_100072562 3300005445 Bacteria 3102
31 Ga0070708_100245603 3300005445 Unclassified 1681
32 Ga0070678_100008008 3300005456 Bacteria 6299
33 Ga0070662_100001162 3300005457 Bacteria 16146
34 Ga0068867_100123510 3300005459 Unclassified 2004
35 Ga0070706_100002354 3300005467 Bacteria 19078
36 Ga0070706_100018693 3300005467 Bacteria 6390
37 Ga0070706_100070711 3300005467 Unclassified 3227
38 Ga0070707_100066814 3300005468 Bacteria 3456
39 Ga0070707_100097470 3300005468 Bacteria 2848
40 Ga0070698_100058835 3300005471 Unclassified 3884
41 Ga0070699_100000881 3300005518 Bacteria 27935
42 Ga0070699_100007207 3300005518 Bacteria 9673
43 Ga0070699_100036232 3300005518 Bacteria 4267
44 Ga0070699_100041953 3300005518 Bacteria 3959
45 Ga0070699_100070073 3300005518 Bacteria 3048
46 Ga0070699_100105990 3300005518 Bacteria 2466
47 Ga0070699_100149901 3300005518 Bacteria 2062
48 Ga0070684_100058040 3300005535 Bacteria 3381
49 Ga0070697_100000668 3300005536 Bacteria 25780
50 Ga0070697_100009074 3300005536 Bacteria 7770
51 Ga0070697_100052809 3300005536 Bacteria 3303
52 Ga0070697_100096146 3300005536 Unclassified 2457
53 Ga0070665_100022093 3300005548 Bacteria 6400
54 Ga0070704_100115939 3300005549 Bacteria 2047
55 Ga0070664_100001333 3300005564 Bacteria 19678
56 Ga0070702_100038071 3300005615 Unclassified 2675
57 Ga0068866_10008458 3300005718 Bacteria 4339
58 Ga0068863_100002174 3300005841 Bacteria 19429
59 Ga0068863_100149579 3300005841 Unclassified 2234
60 Ga0068858_100034809 3300005842 Bacteria 4671
61 Ga0068858_100071777 3300005842 Bacteria 3211
62 Ga0068860_100010805 3300005843 Bacteria 9012
63 Ga0068860_100032368 3300005843 Bacteria 5024
64 Ga0068862_100055146 3300005844 Bacteria 3404
65 Ga0081538_10025802 3300005981 Unclassified 4132
66 Ga0081540_1000815 3300005983 Bacteria 28521
67 Ga0081540_1000935 3300005983 Bacteria 26250
68 Ga0081540_1004501 3300005983 Bacteria 10583
69 Ga0081540_1005112 3300005983 Bacteria 9842
70 Ga0081539_10000021 3300005985 Bacteria 360643
71 Ga0081539_10002905 3300005985 Bacteria 22664
72 Ga0070717_10001287 3300006028 Bacteria 17150
73 Ga0070717_10070252 3300006028 Bacteria 2918
74 Ga0070715_10023239 3300006163 Bacteria 2427
75 Ga0070716_100000727 3300006173 Bacteria 14036
76 Ga0070716_100001090 3300006173 Bacteria 11907
77 Ga0070716_100017774 3300006173 Bacteria 3693
78 Ga0070716_100101579 3300006173 Bacteria 1764
79 Ga0070712_100001116 3300006175 Bacteria 16167
80 Ga0070712_100001725 3300006175 Bacteria 13366
81 Ga0070712_100002504 3300006175 Bacteria 11329
82 Ga0070712_100017272 3300006175 Bacteria 4669
83 Ga0070712_100037299 3300006175 Unclassified 3312
84 Ga0097621_100007089 3300006237 Bacteria 7991
85 Ga0068871_100007911 3300006358 Bacteria 7622
86 Ga0075428_100001589 3300006844 Bacteria 24346
87 Ga0075428_100013098 3300006844 Bacteria 9222
88 Ga0075428_100087313 3300006844 Bacteria 3402
89 Ga0075430_100016294 3300006846 Bacteria 6330
90 Ga0075431_100019111 3300006847 Bacteria 6981
91 Ga0075431_100039516 3300006847 Bacteria 4860
92 Ga0075431_100078741 3300006847 Bacteria 3402
93 Ga0075431_100154166 3300006847 Unclassified 2364
94 Ga0075433_10000118 3300006852 Bacteria 39775
95 Ga0075433_10002597 3300006852 Bacteria 13772
96 Ga0075433_10003627 3300006852 Bacteria 11926
97 Ga0075433_10008861 3300006852 Bacteria 8028
98 Ga0075433_10036641 3300006852 Bacteria 4227
99 Ga0075433_10042890 3300006852 Unclassified 3926
100 Ga0075434_100007985 3300006871 Bacteria 9808
101 Ga0075434_100013172 3300006871 Bacteria 7856
102 Ga0075434_100070911 3300006871 Unclassified 3475
103 Ga0075434_100098203 3300006871 Bacteria 2934
104 Ga0075429_100027589 3300006880 Bacteria 4929
105 Ga0068865_100154866 3300006881 Bacteria 1742
106 Ga0075436_100032573 3300006914 Bacteria 3593
107 Ga0075435_100012848 3300007076 Bacteria 6208
108 Ga0075435_100021089 3300007076 Bacteria 5005
109 Ga0075435_100156220 3300007076 Unclassified 1919
110 Ga0075435_100201185 3300007076 Bacteria 1688
111 Ga0099794_10000036 3300007265 Bacteria 55505
112 Ga0099794_10000946 3300007265 Bacteria 9780
113 Ga0099794_10001467 3300007265 Bacteria 8256
114 Ga0099794_10011241 3300007265 Bacteria 3827
115 Ga0099795_10000883 3300007788 Bacteria 6026
116 Ga0099795_10021683 3300007788 Bacteria 2110
117 Ga0105240_10091715 3300009093 Bacteria 3711
118 Ga0111539_10007450 3300009094 Bacteria 14019
119 Ga0111539_10093741 3300009094 Bacteria 3527
120 Ga0111539_10177356 3300009094 Bacteria 2489
121 Ga0114129_10007027 3300009147 Bacteria 16028
122 Ga0114129_10011863 3300009147 Bacteria 12394
123 Ga0114129_10016114 3300009147 Bacteria 10633
124 Ga0114129_10018197 3300009147 Bacteria 10003
125 Ga0114129_10042694 3300009147 Bacteria 6382
126 Ga0114129_10223504 3300009147 Unclassified 2539
127 Ga0105243_10053649 3300009148 Bacteria 3199
128 Ga0105241_10138177 3300009174 Bacteria 1981
129 Ga0105248_10004373 3300009177 Bacteria 15637
130 Ga0105248_10105011 3300009177 Unclassified 3185
131 Ga0105249_10101521 3300009553 Unclassified 2706
132 Ga0099796_10000889 3300010159 Bacteria 5538
133 Ga0105239_10283205 3300010375 Bacteria 1866
134 Ga0157374_10000377 3300013296 Bacteria 41023
135 Ga0157374_10012334 3300013296 Bacteria 7436
136 Ga0157374_10181593 3300013296 Bacteria 2055
137 Ga0157378_10008854 3300013297 Bacteria 8759
138 Ga0157378_10013122 3300013297 Bacteria 7250
139 Ga0157378_10036636 3300013297 Bacteria 4341
140 Ga0163162_10004209 3300013306 Bacteria 13833
141 Ga0163162_10049659 3300013306 Bacteria 4204
142 Ga0157372_10073015 3300013307 Bacteria 3866
143 Ga0157375_10007399 3300013308 Bacteria 9612
144 Ga0157376_10010107 3300014969 Bacteria 6892
145 Ga0224572_1000042 3300024225 Bacteria 7633
146 Ga0228598_1000110 3300024227 Bacteria 13697
147 Ga0207642_10016158 3300025899 Unclassified 2804
148 Ga0207680_10028316 3300025903 Unclassified 3132
149 Ga0207699_10016572 3300025906 Bacteria 3858
150 Ga0207699_10072752 3300025906 Unclassified 2106
151 Ga0207645_10001760 3300025907 Bacteria 17569
152 Ga0207684_10005155 3300025910 Bacteria 12165
153 Ga0207684_10008776 3300025910 Bacteria 8975
154 Ga0207684_10014314 3300025910 Bacteria 6843
155 Ga0207684_10015751 3300025910 Bacteria 6505
156 Ga0207684_10061515 3300025910 Bacteria 3188
157 Ga0207684_10173877 3300025910 Bacteria 1856
158 Ga0207693_10000124 3300025915 Bacteria 69213
159 Ga0207693_10002995 3300025915 Bacteria 14613
160 Ga0207693_10014260 3300025915 Bacteria 6393
161 Ga0207693_10021931 3300025915 Bacteria 5077
162 Ga0207693_10023950 3300025915 Unclassified 4847
163 Ga0207693_10053278 3300025915 Bacteria 3175
164 Ga0207663_10001549 3300025916 Bacteria 10764
165 Ga0207663_10020307 3300025916 Unclassified 3759
166 Ga0207663_10021741 3300025916 Bacteria 3657
167 Ga0207659_10030940 3300025926 Bacteria 3661
168 Ga0207700_10099854 3300025928 Bacteria 2312
169 Ga0207644_10020872 3300025931 Bacteria 4456
170 Ga0207690_10044488 3300025932 Unclassified 2927
171 Ga0207706_10002020 3300025933 Bacteria 19875
172 Ga0207704_10099720 3300025938 Bacteria 1933
173 Ga0207665_10003745 3300025939 Bacteria 10157
174 Ga0207665_10004479 3300025939 Bacteria 9272
175 Ga0207665_10008263 3300025939 Bacteria 6870
176 Ga0207665_10012647 3300025939 Bacteria 5548
177 Ga0207665_10012955 3300025939 Bacteria 5484
178 Ga0207665_10078844 3300025939 Bacteria 2263
179 Ga0207711_10027145 3300025941 Bacteria 4808
180 Ga0207689_10002864 3300025942 Bacteria 15907
181 Ga0207689_10040085 3300025942 Bacteria 3877
182 Ga0207679_10000793 3300025945 Bacteria 20657
183 Ga0207668_10051313 3300025972 Bacteria 2848
184 Ga0207658_10021492 3300025986 Bacteria 4481
185 Ga0207677_10055700 3300026023 Bacteria 2705
186 Ga0207703_10019556 3300026035 Bacteria 5292
187 Ga0207708_10058356 3300026075 Bacteria 2945
188 Ga0207641_10001341 3300026088 Bacteria 24380
189 Ga0207641_10125649 3300026088 Unclassified 2296
190 Ga0207648_10034532 3300026089 Bacteria 4457
191 Ga0207674_10003911 3300026116 Bacteria 18125
192 Ga0207683_10001646 3300026121 Bacteria 20009
193 Ga0209179_1001128 3300027512 Unclassified 3121
194 Ga0209588_1000020 3300027671 Bacteria 93596
195 Ga0209588_1000063 3300027671 Bacteria 37897
196 Ga0209588_1006084 3300027671 Bacteria 3487
197 Ga0209588_1021438 3300027671 Bacteria 2030
198 Ga0207428_10009339 3300027907 Bacteria 8797
199 Ga0265356_1004695 3300028017 Bacteria 1657
200 Ga0268266_10006527 3300028379 Bacteria 10675
201 Ga0268265_10106106 3300028380 Unclassified 2281
202 Ga0268264_10031731 3300028381 Bacteria 4332
203 Ga0268264_10038480 3300028381 Bacteria 3949
204 Ga0268264_10041270 3300028381 Bacteria 3816
205 Ga0265337_1001079 3300028556 Bacteria 14070
206 Ga0265334_10031054 3300028573 Unclassified 2136
207 Ga0265762_1000686 3300030760 Bacteria 5973
208 Ga0265762_1000849 3300030760 Bacteria 5434
209 Ga0265760_10001001 3300031090 Bacteria 8190
210 Ga0265320_10001785 3300031240 Bacteria 15235
211 Ga0307513_10099016 3300031456 Bacteria 2945
212 Ga0265314_10054453 3300031711 Unclassified 2769
213 Ga0373931_0022922 3300035691 Unclassified 3147
214 Ga0373927_0006905 3300035695 Bacteria 7714
215 Ga0373947_0000657 3300035725 Bacteria 20479
216 Ga0373925_0000345 3300037068 Bacteria 48292
217 Ga0395905_0066227 3300037471 Unclassified 3383
218 Ga0436364_0737333 3300037853 Bacteria 47273
219 Ga0439448_0026228 3300042005 Bacteria 1831
220 Ga0451577_0037026 3300042876 Bacteria 4393
221 Ga0451577_0037728 3300042876 Unclassified 4349
222 Ga0451576_0046525 3300045051 Bacteria 4569
223 Ga0495664_0010278 3300046477 Bacteria 5251
224 Ga0495628_0070743 3300046516 Bacteria 2720
225 Ga0495665_0033009 3300046531 Unclassified 2769
226 Ga0495623_0010563 3300046679 Bacteria 5975
227 Ga0495674_0001054 3300047319 Bacteria 26513
228 Ga0495675_0068297 3300047444 Bacteria 2245
229 Ga0495684_0022961 3300047471 Bacteria 4798
230 Ga0496112_0045026 3300048915 Bacteria 4325
231 Ga0496115_0106656 3300048918 Bacteria 2300
232 Ga0501039_0032644 3300049575 Bacteria 4015
233 Ga0501071_0041906 3300049587 Bacteria 3279
234 Ga0501072_0029291 3300049588 Bacteria 4300
235 Ga0501072_0036609 3300049588 Bacteria 3847
236 Ga0501075_0023457 3300049591 Bacteria 4518
237 Ga0501076_0086384 3300049592 Bacteria 2521
238 nmdc:mga05p37_14119_c1 3300050507 Bacteria 9586
239 nmdc:mga05p37_15072_c1 3300050507 Bacteria 9281
240 nmdc:mga05p37_156119_c1 3300050507 Bacteria 2789
241 nmdc:mga05p37_176579_c1 3300050507 Bacteria 2602
242 nmdc:mga05p37_2374_c1 3300050507 Bacteria 21925
243 nmdc:mga05p37_23961_c1 3300050507 Bacteria 7412
244 nmdc:mga05p37_2626_c1 3300050507 Bacteria 20921
245 nmdc:mga05p37_303021_c1 3300050507 Bacteria 1898
246 nmdc:mga05p37_4285_c1 3300050507 Bacteria 16662
247 nmdc:mga05p37_464465_c1 3300050507 Unclassified 1462
248 nmdc:mga09592_6563_c1 3300050508 Bacteria 9472
249 nmdc:mga0qj67_201265_c1 3300050509 Bacteria 1618
250 nmdc:mga06r32_189566_c1 3300050510 Unclassified 2044
251 nmdc:mga06r32_3292_c1 3300050510 Bacteria 14467
252 nmdc:mga06r32_90346_c1 3300050510 Bacteria 2992
253 nmdc:mga08y16_75459_c1 3300050511 Bacteria 3515
254 nmdc:mga0n895_22537_c1 3300050512 Bacteria 5906
255 nmdc:mga0n895_232565_c1 3300050512 Bacteria 1871
256 nmdc:mga0n895_5296_c1 3300050512 Bacteria 10744
257 nmdc:mga0n895_61572_c1 3300050512 Unclassified 3706
258 nmdc:mga0n895_7478_c1 3300050512 Bacteria 9379
259 nmdc:mga0n895_8425_c1 3300050512 Bacteria 8926
260 nmdc:mga0rr50_130528_c1 3300050513 Bacteria 2011
261 nmdc:mga0rr50_178_c1 3300050513 Bacteria 34254
262 nmdc:mga0rr50_29598_c1 3300050513 Unclassified 3865
263 nmdc:mga0rr50_5115_c1 3300050513 Bacteria 7786
264 nmdc:mga0rr50_6573_c1 3300050513 Bacteria 7099
265 nmdc:mga0rr50_70092_c1 3300050513 Unclassified 2671
266 nmdc:mga08x19_334_c1 3300050514 Bacteria 33957
267 nmdc:mga08x19_64972_c1 3300050514 Bacteria 2369
268 nmdc:mga0a205_12643_c1 3300050515 Bacteria 7817
269 nmdc:mga0a205_250_c1 3300050515 Bacteria 38459
270 nmdc:mga0a205_300756_c1 3300050515 Bacteria 1478
271 nmdc:mga0a205_4589_c1 3300050515 Bacteria 12388
272 nmdc:mga0a205_4849_c1 3300050515 Bacteria 12095
273 nmdc:mga0a205_51975_c1 3300050515 Unclassified 3955
274 nmdc:mga0a205_53484_c2 3300050515 Unclassified 2349
275 nmdc:mga0a205_556_c1 3300050515 Bacteria 29577
276 nmdc:mga0a205_6432_c1 3300050515 Bacteria 10621
277 Ga0501082_0051814 3300060353 Bacteria 3537
278 Ga0530510_0036830 3300061734 Bacteria 3525
279 Ga0099794_10000124
280 LJNas_1000024
281 JGI25406J46586_10003820
282 Ga0070690_100004059
283 Ga0068869_100002037
284 Ga0068869_100056479
285 Ga0070666_10001174
286 Ga0068868_100097121
287 Ga0070687_100030770
288 Ga0070668_100018875
289 Ga0070669_100029735
290 Ga0070675_100010950
291 Ga0070671_100020592
292 Ga0070659_100114722
293 Ga0070667_100006619
294 Ga0070709_10019516
295 Ga0070713_100014242
296 Ga0070713_100018600
297 Ga0070711_100001028
298 Ga0070711_100030526
299 Ga0070708_100000327
300 Ga0070708_100003401
301 Ga0070708_100004425
302 Ga0070708_100007629
303 Ga0070708_100011196
304 Ga0070708_100014938
305 Ga0070708_100015552
306 Ga0070708_100024298
307 Ga0070708_100055662
308 Ga0070708_100072562
309 Ga0070708_100245603
310 Ga0070678_100008008
311 Ga0070662_100001162
312 Ga0068867_100123510
313 Ga0070706_100002354
314 Ga0070706_100018693
315 Ga0070706_100070711
316 Ga0070707_100066814
317 Ga0070707_100097470
318 Ga0070698_100058835
319 Ga0070699_100000881
320 Ga0070699_100007207
321 Ga0070699_100036232
322 Ga0070699_100041953
323 Ga0070699_100070073
324 Ga0070699_100105990
325 Ga0070699_100149901
326 Ga0070684_100058040
327 Ga0070697_100000668
328 Ga0070697_100009074
329 Ga0070697_100052809
330 Ga0070697_100096146
331 Ga0070665_100022093
332 Ga0070704_100115939
333 Ga0070664_100001333
334 Ga0070702_100038071
335 Ga0068866_10008458
336 Ga0068863_100002174
337 Ga0068863_100149579
338 Ga0068858_100034809
339 Ga0068858_100071777
340 Ga0068860_100010805
341 Ga0068860_100032368
342 Ga0068862_100055146
343 Ga0081538_10025802
344 Ga0081540_1000815
345 Ga0081540_1000935
346 Ga0081540_1004501
347 Ga0081540_1005112
348 Ga0081539_10000021
349 Ga0081539_10002905
350 Ga0070717_10001287
351 Ga0070717_10070252
352 Ga0070715_10023239
353 Ga0070716_100000727
354 Ga0070716_100001090
355 Ga0070716_100017774
356 Ga0070716_100101579
357 Ga0070712_100001116
358 Ga0070712_100001725
359 Ga0070712_100002504
360 Ga0070712_100017272
361 Ga0070712_100037299
362 Ga0097621_100007089
363 Ga0068871_100007911
364 Ga0075428_100001589
365 Ga0075428_100013098
366 Ga0075428_100087313
367 Ga0075430_100016294
368 Ga0075431_100019111
369 Ga0075431_100039516
370 Ga0075431_100078741
371 Ga0075431_100154166
372 Ga0075433_10000118
373 Ga0075433_10002597
374 Ga0075433_10003627
375 Ga0075433_10008861
376 Ga0075433_10036641
377 Ga0075433_10042890
378 Ga0075434_100007985
379 Ga0075434_100013172
380 Ga0075434_100070911
381 Ga0075434_100098203
382 Ga0075429_100027589
383 Ga0068865_100154866
384 Ga0075436_100032573
385 Ga0075435_100012848
386 Ga0075435_100021089
387 Ga0075435_100156220
388 Ga0075435_100201185
389 Ga0099794_10000036
390 Ga0099794_10000946
391 Ga0099794_10001467
392 Ga0099794_10011241
393 Ga0099795_10000883
394 Ga0099795_10021683
395 Ga0105240_10091715
396 Ga0111539_10007450
397 Ga0111539_10093741
398 Ga0111539_10177356
399 Ga0114129_10007027
400 Ga0114129_10011863
401 Ga0114129_10016114
402 Ga0114129_10018197
403 Ga0114129_10042694
404 Ga0114129_10223504
405 Ga0105243_10053649
406 Ga0105241_10138177
407 Ga0105248_10004373
408 Ga0105248_10105011
409 Ga0105249_10101521
410 Ga0099796_10000889
411 Ga0105239_10283205
412 Ga0157374_10000377
413 Ga0157374_10012334
414 Ga0157374_10181593
415 Ga0157378_10008854
416 Ga0157378_10013122
417 Ga0157378_10036636
418 Ga0163162_10004209
419 Ga0163162_10049659
420 Ga0157372_10073015
421 Ga0157375_10007399
422 Ga0157376_10010107
423 Ga0224572_1000042
424 Ga0228598_1000110
425 Ga0207642_10016158
426 Ga0207680_10028316
427 Ga0207699_10016572
428 Ga0207699_10072752
429 Ga0207645_10001760
430 Ga0207684_10005155
431 Ga0207684_10008776
432 Ga0207684_10014314
433 Ga0207684_10015751
434 Ga0207684_10061515
435 Ga0207684_10173877
436 Ga0207693_10000124
437 Ga0207693_10002995
438 Ga0207693_10014260
439 Ga0207693_10021931
440 Ga0207693_10023950
441 Ga0207693_10053278
442 Ga0207663_10001549
443 Ga0207663_10020307
444 Ga0207663_10021741
445 Ga0207659_10030940
446 Ga0207700_10099854
447 Ga0207644_10020872
448 Ga0207690_10044488
449 Ga0207706_10002020
450 Ga0207704_10099720
451 Ga0207665_10003745
452 Ga0207665_10004479
453 Ga0207665_10008263
454 Ga0207665_10012647
455 Ga0207665_10012955
456 Ga0207665_10078844
457 Ga0207711_10027145
458 Ga0207689_10002864
459 Ga0207689_10040085
460 Ga0207679_10000793
461 Ga0207668_10051313
462 Ga0207658_10021492
463 Ga0207677_10055700
464 Ga0207703_10019556
465 Ga0207708_10058356
466 Ga0207641_10001341
467 Ga0207641_10125649
468 Ga0207648_10034532
469 Ga0207674_10003911
470 Ga0207683_10001646
471 Ga0209179_1001128
472 Ga0209588_1000020
473 Ga0209588_1000063
474 Ga0209588_1006084
475 Ga0209588_1021438
476 Ga0207428_10009339
477 Ga0265356_1004695
478 Ga0268266_10006527
479 Ga0268265_10106106
480 Ga0268264_10031731
481 Ga0268264_10038480
482 Ga0268264_10041270
483 Ga0265337_1001079
484 Ga0265334_10031054
485 Ga0265762_1000686
486 Ga0265762_1000849
487 Ga0265760_10001001
488 Ga0265320_10001785
489 Ga0307513_10099016
490 Ga0265314_10054453
491 Ga0373931_0022922
492 Ga0373927_0006905
493 Ga0373947_0000657
494 Ga0373925_0000345
495 Ga0395905_0066227
496 Ga0436364_0737333
497 Ga0439448_0026228
498 Ga0451577_0037026
499 Ga0451577_0037728
500 Ga0451576_0046525
501 Ga0495664_0010278
502 Ga0495628_0070743
503 Ga0495665_0033009
504 Ga0495623_0010563
505 Ga0495674_0001054
506 Ga0495675_0068297
507 Ga0495684_0022961
508 Ga0496112_0045026
509 Ga0496115_0106656
510 Ga0501039_0032644
511 Ga0501071_0041906
512 Ga0501072_0029291
513 Ga0501072_0036609
514 Ga0501075_0023457
515 Ga0501076_0086384
516 nmdc:mga05p37_14119_c1
517 nmdc:mga05p37_15072_c1
518 nmdc:mga05p37_156119_c1
519 nmdc:mga05p37_176579_c1
520 nmdc:mga05p37_2374_c1
521 nmdc:mga05p37_23961_c1
522 nmdc:mga05p37_2626_c1
523 nmdc:mga05p37_303021_c1
524 nmdc:mga05p37_4285_c1
525 nmdc:mga05p37_464465_c1
526 nmdc:mga09592_6563_c1
527 nmdc:mga0qj67_201265_c1
528 nmdc:mga06r32_189566_c1
529 nmdc:mga06r32_3292_c1
530 nmdc:mga06r32_90346_c1
531 nmdc:mga08y16_75459_c1
532 nmdc:mga0n895_22537_c1
533 nmdc:mga0n895_232565_c1
534 nmdc:mga0n895_5296_c1
535 nmdc:mga0n895_61572_c1
536 nmdc:mga0n895_7478_c1
537 nmdc:mga0n895_8425_c1
538 nmdc:mga0rr50_130528_c1
539 nmdc:mga0rr50_178_c1
540 nmdc:mga0rr50_29598_c1
541 nmdc:mga0rr50_5115_c1
542 nmdc:mga0rr50_6573_c1
543 nmdc:mga0rr50_70092_c1
544 nmdc:mga08x19_334_c1
545 nmdc:mga08x19_64972_c1
546 nmdc:mga0a205_12643_c1
547 nmdc:mga0a205_250_c1
548 nmdc:mga0a205_300756_c1
549 nmdc:mga0a205_4589_c1
550 nmdc:mga0a205_4849_c1
551 nmdc:mga0a205_51975_c1
552 nmdc:mga0a205_53484_c2
553 nmdc:mga0a205_556_c1
554 nmdc:mga0a205_6432_c1
555 Ga0501082_0051814
556 Ga0530510_0036830

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00033

Cytochrome_B

Cytochrome b/b6/petB

34

223

0.96

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

399

472

0.88

PF13631

Cytochrom_B_N_2

Cytochrome b(N-terminal)/b6/petB

104

291

0.84

PF00034

Cytochrom_C

Cytochrome c

402

476

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vf5-assembly1.cif.gz_A crystal structure of cytochrome b6f complex from m.laminosus 0.8877 33 223
2d2c-assembly1.cif.gz_A crystal structure of cytochrome b6f complex with dbmib from m. laminosus 0.8741 33 223
1q90-assembly1.cif.gz_B structure of the cytochrome b6f (plastohydroquinone : plastocyanin oxidoreductase) from chlamydomonas reinhardtii 0.8528 9 214
2e74-assembly1.cif.gz_A crystal structure of the cytochrome b6f complex from m.laminosus 0.8498 9 214
4h44-assembly1.cif.gz_A 2.70 a cytochrome b6f complex structure from nostoc pcc 7120 0.8459 9 214
ID Description Score Start End Superfamily
1vf5A00 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8877 33 223 1.20.810.10
af_P03873_1_172_1.20.810.10 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8858 27 140 1.20.810.10
2d2cA00 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8741 33 223 1.20.810.10
af_P03879_1_263_1.20.810.10 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8492 21 280 1.20.810.10
af_P05642_1_215_1.20.810.10 Mainly Alpha;Up-down Bundle;Cytochrome Bc1 Complex; Chain C;Cytochrome Bc1 Complex; Chain C 0.8324 6 214 1.20.810.10
ID Description Score Start End GO Terms
AF-A0A7W0MXX5-F1-model_v4 Cytochrome bc1 complex cytochrome b subunit (EC 7.1.1.8) (Cytochrome bc1 reductase complex subunit QcrB) 0.9185 40 214 GO:0009055
GO:0016020
GO:0016491
GO:0022904
AF-E1QHS8-F1-model_v4 Cytochrome b/b6 domain protein 0.9137 36 207 GO:0009055
GO:0016020
GO:0016491
GO:0022904
AF-A0A0R2Q699-F1-model_v4 Cytochrome bc1 complex cytochrome b subunit (EC 7.1.1.8) (Cytochrome bc1 reductase complex subunit QcrB) 0.9115 33 206 GO:0008121
GO:0016020
GO:0022904
AF-A0A2E4KFD2-F1-model_v4 Cytochrome bc1 complex cytochrome b subunit (EC 7.1.1.8) (Cytochrome bc1 reductase complex subunit QcrB) 0.9097 33 214 GO:0008121
GO:0016020
GO:0022904
AF-A0A651GFP5-F1-model_v4 Cytochrome bc1 complex cytochrome b subunit (EC 7.1.1.8) (Cytochrome bc1 reductase complex subunit QcrB) 0.9093 35 214 GO:0008121
GO:0016020
GO:0022904

Map