F382311

General Info

Members Datasets Scaffolds Average Seq Length
278 152 556 213

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10000145|Ga0075368_1000014515
Length 224
Sequence VRVDTCSPTRMIVVTETRGERKERTRRAILDAALHLCEDSSLVALSLRQVAKEVGIVPTAFYRHFDSIESLGLALVDESFVSLRAMLRDIRRGDPSTGMPALANIVDRSVETLFEHVHQQRSHFQFISRERAAGPPSVREAIRHEIELCERELATDLARLPGTDTWSAEDLRVLSNLIVSAMVATAEQIMEAGGRVAAEKQIVESARTQLRMVLVGALNWQSRS

Samples

Sample ID Description Type Environment
1 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
44 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
45 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
48 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
49 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
50 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
51 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
90 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
91 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
94 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
95 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
96 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
103 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
104 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
105 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
106 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
107 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
108 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
109 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
110 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
111 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
112 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
121 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
126 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
127 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
128 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
129 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
130 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
131 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
139 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
140 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
141 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
144 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
147 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
151 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
152 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 98.92
Metatranscriptomes 0
Isolates 1.08

Biome Distribution

Category Percentage (%)
Aerial Root 0.72
Bulb 0
Endosphere 28.06
Nodule 0
Rhizoplane 5.4
Rhizosphere 64.03
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075368_10000145 3300006042 Bacteria 18861
2 LJQas_1000481 3300000549 Bacteria 6597
3 rootL2_10247118 3300003322 Bacteria 2134
4 rootL2_10364061 3300003322 Bacteria 1106
5 rootL2_10368144 3300003322 Bacteria 1779
6 Ga0070683_100022106 3300005329 Bacteria 5681
7 Ga0070683_100641265 3300005329 Bacteria 1017
8 Ga0068868_101040827 3300005338 Bacteria 751
9 Ga0070660_100007905 3300005339 Bacteria 7420
10 Ga0070660_100065362 3300005339 Bacteria 2831
11 Ga0070689_100987922 3300005340 Bacteria 748
12 Ga0070675_100361537 3300005354 Bacteria 1289
13 Ga0070674_100205117 3300005356 Bacteria 1525
14 Ga0070673_100090355 3300005364 Bacteria 2501
15 Ga0070688_100197104 3300005365 Bacteria 1407
16 Ga0070688_100458994 3300005365 Bacteria 954
17 Ga0070700_100103550 3300005441 Bacteria 1879
18 Ga0070708_100260185 3300005445 Bacteria 1631
19 Ga0070663_100018101 3300005455 Bacteria 4612
20 Ga0070663_100104153 3300005455 Bacteria 2122
21 Ga0070678_100254384 3300005456 Bacteria 1474
22 Ga0070662_100066118 3300005457 Bacteria 2652
23 Ga0068867_100006732 3300005459 Bacteria 8123
24 Ga0070707_100491859 3300005468 Bacteria 1188
25 Ga0070698_100007249 3300005471 Bacteria 12011
26 Ga0070684_100296667 3300005535 Bacteria 1483
27 Ga0068853_100340438 3300005539 Bacteria 1393
28 Ga0070672_100004459 3300005543 Bacteria 9168
29 Ga0070693_100071322 3300005547 Bacteria 2047
30 Ga0068855_100041614 3300005563 Bacteria 5446
31 Ga0070664_100013974 3300005564 Bacteria 6546
32 Ga0070702_100018064 3300005615 Bacteria 3651
33 Ga0068852_100020701 3300005616 Bacteria 5233
34 Ga0068870_10006023 3300005840 Bacteria 5327
35 Ga0068870_10542652 3300005840 Bacteria 782
36 Ga0068860_100000301 3300005843 Bacteria 68703
37 Ga0081539_10106666 3300005985 Bacteria 1418
38 Ga0075365_10002907 3300006038 Bacteria 8639
39 Ga0075365_10003466 3300006038 Bacteria 8134
40 Ga0075365_10012727 3300006038 Bacteria 5007
41 Ga0075365_10033499 3300006038 Bacteria 3311
42 Ga0075365_10065359 3300006038 Bacteria 2438
43 Ga0075365_10090091 3300006038 Bacteria 2089
44 Ga0075365_10116286 3300006038 Bacteria 1842
45 Ga0075365_10127055 3300006038 Bacteria 1762
46 Ga0075365_10128532 3300006038 Bacteria 1752
47 Ga0075365_10136139 3300006038 Bacteria 1703
48 Ga0075365_10204198 3300006038 Bacteria 1385
49 Ga0075368_10017095 3300006042 Bacteria 2711
50 Ga0075368_10121740 3300006042 Bacteria 1081
51 Ga0075368_10185880 3300006042 Bacteria 877
52 Ga0075363_100001781 3300006048 Bacteria 8427
53 Ga0075363_100004038 3300006048 Bacteria 6351
54 Ga0075363_100011697 3300006048 Bacteria 4210
55 Ga0075363_100027771 3300006048 Bacteria 2905
56 Ga0075363_100042813 3300006048 Bacteria 2393
57 Ga0075363_100278246 3300006048 Bacteria 968
58 Ga0075364_10003637 3300006051 Bacteria 8795
59 Ga0075364_10010041 3300006051 Bacteria 5703
60 Ga0075364_10024836 3300006051 Bacteria 3809
61 Ga0075364_10118968 3300006051 Bacteria 1767
62 Ga0075364_10240453 3300006051 Bacteria 1230
63 Ga0075362_10014910 3300006177 Bacteria 3150
64 Ga0075367_10010826 3300006178 Bacteria 4806
65 Ga0075367_10015139 3300006178 Bacteria 4187
66 Ga0075367_10155002 3300006178 Bacteria 1423
67 Ga0075367_10208322 3300006178 Bacteria 1222
68 Ga0075370_10004018 3300006353 Bacteria 7072
69 Ga0075370_10032176 3300006353 Bacteria 2931
70 Ga0075370_10032583 3300006353 Bacteria 2914
71 Ga0075370_10034781 3300006353 Bacteria 2825
72 Ga0075370_10071645 3300006353 Bacteria 1983
73 Ga0075370_10186397 3300006353 Bacteria 1222
74 Ga0068871_100482781 3300006358 Bacteria 1115
75 Ga0068865_100011623 3300006881 Bacteria 5516
76 Ga0068865_100799975 3300006881 Bacteria 813
77 Ga0111539_10027309 3300009094 Bacteria 6970
78 Ga0111539_10345844 3300009094 Bacteria 1731
79 Ga0111539_10510000 3300009094 Bacteria 1401
80 Ga0105245_10026630 3300009098 Bacteria 5091
81 Ga0105243_10024034 3300009148 Bacteria 4644
82 Ga0105243_10428909 3300009148 Bacteria 1235
83 Ga0105242_10053484 3300009176 Bacteria 3297
84 Ga0105237_10090490 3300009545 Bacteria 3049
85 Ga0105249_10271666 3300009553 Bacteria 1689
86 Ga0105239_10004418 3300010375 Bacteria 16823
87 Ga0105239_10071986 3300010375 Bacteria 3799
88 Ga0105239_10149617 3300010375 Bacteria 2605
89 Ga0157371_10233942 3300013102 Bacteria 1321
90 Ga0157372_10041155 3300013307 Bacteria 5108
91 Ga0157375_10837927 3300013308 Bacteria 1067
92 Ga0163163_10320119 3300014325 Bacteria 1605
93 Ga0157380_10008885 3300014326 Bacteria 7180
94 Ga0157380_10248448 3300014326 Bacteria 1609
95 Ga0157376_11090013 3300014969 Bacteria 824
96 Ga0163161_10670033 3300017792 Bacteria 861
97 Ga0207688_10032579 3300025901 Bacteria 2881
98 Ga0207647_10113551 3300025904 Bacteria 1601
99 Ga0207643_10000778 3300025908 Bacteria 19442
100 Ga0207643_10197796 3300025908 Bacteria 1223
101 Ga0207671_10123751 3300025914 Bacteria 1979
102 Ga0207662_10186806 3300025918 Bacteria 1336
103 Ga0207657_10011845 3300025919 Bacteria 8633
104 Ga0207657_10161933 3300025919 Bacteria 1817
105 Ga0207646_10386185 3300025922 Bacteria 1265
106 Ga0207694_10479825 3300025924 Bacteria 1040
107 Ga0207687_10133587 3300025927 Bacteria 1874
108 Ga0207690_10050614 3300025932 Bacteria 2774
109 Ga0207690_10217677 3300025932 Bacteria 1459
110 Ga0207706_10043769 3300025933 Bacteria 3967
111 Ga0207704_10049399 3300025938 Bacteria 2530
112 Ga0207691_10000684 3300025940 Bacteria 33504
113 Ga0207661_10331362 3300025944 Bacteria 1370
114 Ga0207661_10500488 3300025944 Bacteria 1110
115 Ga0207667_10136635 3300025949 Bacteria 2524
116 Ga0207651_10121650 3300025960 Bacteria 1981
117 Ga0207712_10159112 3300025961 Bacteria 1753
118 Ga0207678_10011682 3300026067 Bacteria 7710
119 Ga0207678_10500754 3300026067 Bacteria 1059
120 Ga0207708_10001770 3300026075 Bacteria 15960
121 Ga0207708_10020906 3300026075 Bacteria 4938
122 Ga0207648_10007609 3300026089 Bacteria 10619
123 Ga0207675_100012367 3300026118 Bacteria 7972
124 Ga0207683_10289999 3300026121 Bacteria 1496
125 Ga0207698_10175990 3300026142 Bacteria 1889
126 Ga0209813_10021277 3300027866 Bacteria 1822
127 Ga0209813_10027544 3300027866 Bacteria 1651
128 Ga0268264_10000269 3300028381 Bacteria 91321
129 Ga0307413_10381578 3300031824 Bacteria 1098
130 Ga0307410_10072068 3300031852 Bacteria 2398
131 Ga0307407_10055481 3300031903 Bacteria 2290
132 Ga0307407_10062490 3300031903 Bacteria 2181
133 Ga0307407_10065247 3300031903 Bacteria 2143
134 Ga0307407_10101447 3300031903 Bacteria 1787
135 Ga0307407_10176870 3300031903 Bacteria 1411
136 Ga0307412_10345229 3300031911 Bacteria 1193
137 Ga0307409_100174981 3300031995 Bacteria 1893
138 Ga0307409_100320001 3300031995 Bacteria 1451
139 Ga0307409_100915450 3300031995 Bacteria 891
140 Ga0307416_100028439 3300032002 Bacteria 4157
141 Ga0307416_100142593 3300032002 Bacteria 2180
142 Ga0307414_10410191 3300032004 Bacteria 1179
143 Ga0307411_10404209 3300032005 Bacteria 1130
144 Ga0307415_100001157 3300032126 Bacteria 12349
145 Ga0307415_100410980 3300032126 Bacteria 1158
146 Ga0395905_0232668 3300037471 Bacteria 1723
147 Ga0395901_0091583 3300038443 Bacteria 3183
148 Ga0451791_1527787 3300041451 Bacteria 979
149 Ga0451853_2910482 3300041512 Bacteria 1036
150 Ga0466972_0033615 3300044658 Bacteria 2515
151 Ga0466972_0071827 3300044658 Bacteria 1651
152 Ga0466972_0083188 3300044658 Bacteria 1523
153 Ga0466965_0001598 3300044683 Bacteria 9246
154 Ga0466965_0013251 3300044683 Bacteria 3888
155 Ga0466965_0014961 3300044683 Bacteria 3679
156 Ga0466965_0047256 3300044683 Bacteria 2131
157 Ga0466965_0074097 3300044683 Bacteria 1715
158 Ga0466963_0061038 3300044694 Bacteria 2519
159 Ga0466964_0100717 3300044706 Bacteria 1273
160 Ga0466968_0045253 3300044735 Bacteria 1867
161 Ga0466970_0002706 3300044765 Bacteria 8560
162 Ga0466970_0008618 3300044765 Bacteria 5137
163 Ga0466970_0018655 3300044765 Bacteria 3594
164 Ga0466970_0019437 3300044765 Bacteria 3522
165 Ga0466970_0025831 3300044765 Bacteria 3077
166 Ga0466970_0058947 3300044765 Bacteria 2056
167 Ga0466957_0022173 3300044842 Bacteria 3744
168 Ga0466957_0038204 3300044842 Bacteria 2892
169 Ga0466957_0221854 3300044842 Bacteria 1248
170 Ga0466960_0000096 3300044901 Bacteria 28669
171 Ga0466960_0045745 3300044901 Bacteria 2092
172 Ga0466960_0052028 3300044901 Bacteria 1980
173 Ga0466960_0095138 3300044901 Bacteria 1525
174 Ga0466958_0020567 3300045836 Bacteria 3851
175 Ga0466967_0024697 3300045976 Bacteria 4945
176 Ga0466967_0213042 3300045976 Bacteria 1833
177 Ga0466967_0243548 3300045976 Bacteria 1716
178 Ga0466967_0839787 3300045976 Bacteria 912
179 Ga0495587_0394978 3300046536 Bacteria 769
180 Ga0496100_0192676 3300048903 Bacteria 1481
181 Ga0496101_0148131 3300048904 Bacteria 1794
182 Ga0496101_0264207 3300048904 Bacteria 1343
183 Ga0496102_0604463 3300048905 Bacteria 1020
184 Ga0496102_0610490 3300048905 Bacteria 1014
185 Ga0496106_0210000 3300048909 Bacteria 1551
186 Ga0496107_0808652 3300048910 Bacteria 686
187 Ga0496108_0566125 3300048911 Bacteria 991
188 Ga0496109_0059409 3300048912 Bacteria 3493
189 Ga0496110_0307718 3300048913 Bacteria 1443
190 Ga0496111_0094232 3300048914 Bacteria 2196
191 Ga0496114_0077473 3300048917 Bacteria 2803
192 Ga0496114_0139184 3300048917 Bacteria 2100
193 Ga0496114_0610522 3300048917 Bacteria 961
194 Ga0501031_0038242 3300049568 Bacteria 3132
195 Ga0501032_0011479 3300049569 Bacteria 6363
196 Ga0501033_0002518 3300049570 Bacteria 15511
197 Ga0501033_0321780 3300049570 Bacteria 1086
198 Ga0501034_0299252 3300049571 Bacteria 1546
199 Ga0501036_0012022 3300049572 Bacteria 7176
200 Ga0501036_0078323 3300049572 Bacteria 2796
201 Ga0501037_0002352 3300049573 Bacteria 13662
202 Ga0501038_0001745 3300049574 Bacteria 20203
203 Ga0501039_0005824 3300049575 Bacteria 9331
204 Ga0501039_0481317 3300049575 Bacteria 975
205 Ga0501042_0018614 3300049578 Bacteria 4811
206 Ga0501042_0146302 3300049578 Bacteria 1704
207 Ga0501043_0039537 3300049579 Bacteria 3706
208 Ga0501046_0003431 3300049580 Bacteria 14548
209 Ga0501046_0017970 3300049580 Bacteria 5893
210 Ga0501047_0425149 3300049581 Bacteria 1159
211 Ga0501048_0008834 3300049582 Bacteria 7590
212 Ga0501048_0258264 3300049582 Bacteria 1238
213 Ga0501067_0058958 3300049583 Bacteria 2125
214 Ga0501067_0068705 3300049583 Bacteria 1962
215 Ga0501068_0306921 3300049584 Bacteria 1016
216 Ga0501069_0151847 3300049585 Bacteria 1331
217 Ga0501069_0422254 3300049585 Bacteria 790
218 Ga0501070_0001359 3300049586 Bacteria 21923
219 Ga0501070_0039778 3300049586 Bacteria 3921
220 Ga0501070_0305861 3300049586 Bacteria 1294
221 Ga0501070_0521949 3300049586 Bacteria 953
222 Ga0501071_0759719 3300049587 Bacteria 747
223 Ga0501072_0077286 3300049588 Bacteria 2635
224 Ga0501073_0033158 3300049589 Bacteria 3679
225 Ga0501074_0154132 3300049590 Bacteria 1642
226 Ga0501077_0407204 3300049593 Bacteria 870
227 Ga0501079_0165668 3300049741 Bacteria 1724
228 Ga0501080_0041817 3300049742 Bacteria 4269
229 Ga0501080_0420132 3300049742 Bacteria 1201
230 Ga0501035_0041958 3300049822 Bacteria 4128
231 Ga0501044_0056097 3300049823 Bacteria 4044
232 nmdc:mga03683_43452_c1 3300050489 Bacteria 1854
233 nmdc:mga03n38_10426_c1 3300050490 Bacteria 3418
234 nmdc:mga03n38_172657_c1 3300050490 Bacteria 1102
235 nmdc:mga03n38_56176_c1 3300050490 Bacteria 1776
236 nmdc:mga03n38_56411_c1 3300050490 Bacteria 931
237 nmdc:mga03n38_6909_c1 3300050490 Bacteria 3984
238 nmdc:mga03n38_92214_c1 3300050490 Bacteria 1444
239 nmdc:mga00v17_102985_c1 3300050491 Bacteria 1804
240 nmdc:mga00v17_10339_c1 3300050491 Bacteria 5090
241 nmdc:mga00v17_13530_c1 3300050491 Bacteria 4533
242 nmdc:mga00v17_19654_c1 3300050491 Bacteria 3861
243 nmdc:mga00v17_300622_c1 3300050491 Bacteria 1042
244 nmdc:mga00v17_36631_c1 3300050491 Bacteria 2925
245 nmdc:mga00v17_6146_c1 3300050491 Bacteria 6363
246 nmdc:mga0yw44_144540_c1 3300050492 Bacteria 1548
247 nmdc:mga0yw44_154954_c1 3300050492 Bacteria 1497
248 nmdc:mga0yw44_155726_c1 3300050492 Bacteria 1493
249 nmdc:mga0yw44_162211_c1 3300050492 Bacteria 1464
250 nmdc:mga0yw44_168332_c1 3300050492 Bacteria 1438
251 nmdc:mga0yw44_181716_c1 3300050492 Bacteria 1385
252 nmdc:mga0yw44_21523_c1 3300050492 Bacteria 3599
253 nmdc:mga0yw44_23201_c1 3300050492 Bacteria 3492
254 nmdc:mga0yw44_25168_c1 3300050492 Bacteria 2811
255 nmdc:mga0yw44_292812_c1 3300050492 Bacteria 1090
256 nmdc:mga0yw44_3438_c1 3300050492 Bacteria 7030
257 nmdc:mga0yw44_390878_c1 3300050492 Bacteria 940
258 nmdc:mga0yw44_586574_c1 3300050492 Bacteria 757
259 nmdc:mga0yw44_71032_c1 3300050492 Bacteria 2160
260 nmdc:mga06z11_127901_c1 3300050494 Bacteria 1423
261 nmdc:mga06z11_22929_c1 3300050494 Bacteria 2924
262 nmdc:mga06z11_30589_c1 3300050494 Bacteria 2606
263 nmdc:mga06z11_73875_c1 3300050494 Bacteria 1812
264 nmdc:mga04h51_789_c1 3300050495 Bacteria 7354
265 nmdc:mga07m45_167332_c1 3300050496 Bacteria 1277
266 nmdc:mga07m45_21939_c1 3300050496 Bacteria 3482
267 nmdc:mga07m45_65800_c1 3300050496 Bacteria 2059
268 nmdc:mga07m45_83763_c1 3300050496 Bacteria 1823
269 nmdc:mga08y16_230261_c1 3300050511 Bacteria 1916
270 nmdc:mga08y16_266637_c1 3300050511 Bacteria 1768
271 nmdc:mga08y16_91387_c1 3300050511 Bacteria 3172
272 Ga0500644_0000329 3300053088 Bacteria 24275
273 Ga0500573_0004193 3300053140 Bacteria 7555
274 Ga0466962_0002786 3300061719 Bacteria 8307
275 Ga0530510_0637114 3300061734 Bacteria 811
276 2857482268 2857481737 Bacteria 4761446
277 2984576864 2984576629 Bacteria 4248407
278 2990258612 2990256926 Bacteria 4252839
279 Ga0075368_10000145
280 LJQas_1000481
281 rootL2_10247118
282 rootL2_10364061
283 rootL2_10368144
284 Ga0070683_100022106
285 Ga0070683_100641265
286 Ga0068868_101040827
287 Ga0070660_100007905
288 Ga0070660_100065362
289 Ga0070689_100987922
290 Ga0070675_100361537
291 Ga0070674_100205117
292 Ga0070673_100090355
293 Ga0070688_100197104
294 Ga0070688_100458994
295 Ga0070700_100103550
296 Ga0070708_100260185
297 Ga0070663_100018101
298 Ga0070663_100104153
299 Ga0070678_100254384
300 Ga0070662_100066118
301 Ga0068867_100006732
302 Ga0070707_100491859
303 Ga0070698_100007249
304 Ga0070684_100296667
305 Ga0068853_100340438
306 Ga0070672_100004459
307 Ga0070693_100071322
308 Ga0068855_100041614
309 Ga0070664_100013974
310 Ga0070702_100018064
311 Ga0068852_100020701
312 Ga0068870_10006023
313 Ga0068870_10542652
314 Ga0068860_100000301
315 Ga0081539_10106666
316 Ga0075365_10002907
317 Ga0075365_10003466
318 Ga0075365_10012727
319 Ga0075365_10033499
320 Ga0075365_10065359
321 Ga0075365_10090091
322 Ga0075365_10116286
323 Ga0075365_10127055
324 Ga0075365_10128532
325 Ga0075365_10136139
326 Ga0075365_10204198
327 Ga0075368_10017095
328 Ga0075368_10121740
329 Ga0075368_10185880
330 Ga0075363_100001781
331 Ga0075363_100004038
332 Ga0075363_100011697
333 Ga0075363_100027771
334 Ga0075363_100042813
335 Ga0075363_100278246
336 Ga0075364_10003637
337 Ga0075364_10010041
338 Ga0075364_10024836
339 Ga0075364_10118968
340 Ga0075364_10240453
341 Ga0075362_10014910
342 Ga0075367_10010826
343 Ga0075367_10015139
344 Ga0075367_10155002
345 Ga0075367_10208322
346 Ga0075370_10004018
347 Ga0075370_10032176
348 Ga0075370_10032583
349 Ga0075370_10034781
350 Ga0075370_10071645
351 Ga0075370_10186397
352 Ga0068871_100482781
353 Ga0068865_100011623
354 Ga0068865_100799975
355 Ga0111539_10027309
356 Ga0111539_10345844
357 Ga0111539_10510000
358 Ga0105245_10026630
359 Ga0105243_10024034
360 Ga0105243_10428909
361 Ga0105242_10053484
362 Ga0105237_10090490
363 Ga0105249_10271666
364 Ga0105239_10004418
365 Ga0105239_10071986
366 Ga0105239_10149617
367 Ga0157371_10233942
368 Ga0157372_10041155
369 Ga0157375_10837927
370 Ga0163163_10320119
371 Ga0157380_10008885
372 Ga0157380_10248448
373 Ga0157376_11090013
374 Ga0163161_10670033
375 Ga0207688_10032579
376 Ga0207647_10113551
377 Ga0207643_10000778
378 Ga0207643_10197796
379 Ga0207671_10123751
380 Ga0207662_10186806
381 Ga0207657_10011845
382 Ga0207657_10161933
383 Ga0207646_10386185
384 Ga0207694_10479825
385 Ga0207687_10133587
386 Ga0207690_10050614
387 Ga0207690_10217677
388 Ga0207706_10043769
389 Ga0207704_10049399
390 Ga0207691_10000684
391 Ga0207661_10331362
392 Ga0207661_10500488
393 Ga0207667_10136635
394 Ga0207651_10121650
395 Ga0207712_10159112
396 Ga0207678_10011682
397 Ga0207678_10500754
398 Ga0207708_10001770
399 Ga0207708_10020906
400 Ga0207648_10007609
401 Ga0207675_100012367
402 Ga0207683_10289999
403 Ga0207698_10175990
404 Ga0209813_10021277
405 Ga0209813_10027544
406 Ga0268264_10000269
407 Ga0307413_10381578
408 Ga0307410_10072068
409 Ga0307407_10055481
410 Ga0307407_10062490
411 Ga0307407_10065247
412 Ga0307407_10101447
413 Ga0307407_10176870
414 Ga0307412_10345229
415 Ga0307409_100174981
416 Ga0307409_100320001
417 Ga0307409_100915450
418 Ga0307416_100028439
419 Ga0307416_100142593
420 Ga0307414_10410191
421 Ga0307411_10404209
422 Ga0307415_100001157
423 Ga0307415_100410980
424 Ga0395905_0232668
425 Ga0395901_0091583
426 Ga0451791_1527787
427 Ga0451853_2910482
428 Ga0466972_0033615
429 Ga0466972_0071827
430 Ga0466972_0083188
431 Ga0466965_0001598
432 Ga0466965_0013251
433 Ga0466965_0014961
434 Ga0466965_0047256
435 Ga0466965_0074097
436 Ga0466963_0061038
437 Ga0466964_0100717
438 Ga0466968_0045253
439 Ga0466970_0002706
440 Ga0466970_0008618
441 Ga0466970_0018655
442 Ga0466970_0019437
443 Ga0466970_0025831
444 Ga0466970_0058947
445 Ga0466957_0022173
446 Ga0466957_0038204
447 Ga0466957_0221854
448 Ga0466960_0000096
449 Ga0466960_0045745
450 Ga0466960_0052028
451 Ga0466960_0095138
452 Ga0466958_0020567
453 Ga0466967_0024697
454 Ga0466967_0213042
455 Ga0466967_0243548
456 Ga0466967_0839787
457 Ga0495587_0394978
458 Ga0496100_0192676
459 Ga0496101_0148131
460 Ga0496101_0264207
461 Ga0496102_0604463
462 Ga0496102_0610490
463 Ga0496106_0210000
464 Ga0496107_0808652
465 Ga0496108_0566125
466 Ga0496109_0059409
467 Ga0496110_0307718
468 Ga0496111_0094232
469 Ga0496114_0077473
470 Ga0496114_0139184
471 Ga0496114_0610522
472 Ga0501031_0038242
473 Ga0501032_0011479
474 Ga0501033_0002518
475 Ga0501033_0321780
476 Ga0501034_0299252
477 Ga0501036_0012022
478 Ga0501036_0078323
479 Ga0501037_0002352
480 Ga0501038_0001745
481 Ga0501039_0005824
482 Ga0501039_0481317
483 Ga0501042_0018614
484 Ga0501042_0146302
485 Ga0501043_0039537
486 Ga0501046_0003431
487 Ga0501046_0017970
488 Ga0501047_0425149
489 Ga0501048_0008834
490 Ga0501048_0258264
491 Ga0501067_0058958
492 Ga0501067_0068705
493 Ga0501068_0306921
494 Ga0501069_0151847
495 Ga0501069_0422254
496 Ga0501070_0001359
497 Ga0501070_0039778
498 Ga0501070_0305861
499 Ga0501070_0521949
500 Ga0501071_0759719
501 Ga0501072_0077286
502 Ga0501073_0033158
503 Ga0501074_0154132
504 Ga0501077_0407204
505 Ga0501079_0165668
506 Ga0501080_0041817
507 Ga0501080_0420132
508 Ga0501035_0041958
509 Ga0501044_0056097
510 nmdc:mga03683_43452_c1
511 nmdc:mga03n38_10426_c1
512 nmdc:mga03n38_172657_c1
513 nmdc:mga03n38_56176_c1
514 nmdc:mga03n38_56411_c1
515 nmdc:mga03n38_6909_c1
516 nmdc:mga03n38_92214_c1
517 nmdc:mga00v17_102985_c1
518 nmdc:mga00v17_10339_c1
519 nmdc:mga00v17_13530_c1
520 nmdc:mga00v17_19654_c1
521 nmdc:mga00v17_300622_c1
522 nmdc:mga00v17_36631_c1
523 nmdc:mga00v17_6146_c1
524 nmdc:mga0yw44_144540_c1
525 nmdc:mga0yw44_154954_c1
526 nmdc:mga0yw44_155726_c1
527 nmdc:mga0yw44_162211_c1
528 nmdc:mga0yw44_168332_c1
529 nmdc:mga0yw44_181716_c1
530 nmdc:mga0yw44_21523_c1
531 nmdc:mga0yw44_23201_c1
532 nmdc:mga0yw44_25168_c1
533 nmdc:mga0yw44_292812_c1
534 nmdc:mga0yw44_3438_c1
535 nmdc:mga0yw44_390878_c1
536 nmdc:mga0yw44_586574_c1
537 nmdc:mga0yw44_71032_c1
538 nmdc:mga06z11_127901_c1
539 nmdc:mga06z11_22929_c1
540 nmdc:mga06z11_30589_c1
541 nmdc:mga06z11_73875_c1
542 nmdc:mga04h51_789_c1
543 nmdc:mga07m45_167332_c1
544 nmdc:mga07m45_21939_c1
545 nmdc:mga07m45_65800_c1
546 nmdc:mga07m45_83763_c1
547 nmdc:mga08y16_230261_c1
548 nmdc:mga08y16_266637_c1
549 nmdc:mga08y16_91387_c1
550 Ga0500644_0000329
551 Ga0500573_0004193
552 Ga0466962_0002786
553 Ga0530510_0637114
554 2857482268
555 2984576864
556 2990258612

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

29

75

0.95

PF21943

TetR_C_46

Tetracyclin repressor-like, C-terminal domain

102

216

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lsr-assembly1.cif.gz_A-2 crystal structure of dest in complex with duplex dna 0.9314 11 210
3lsr-assembly1.cif.gz_A-2 crystal structure of dest in complex with duplex dna 0.9268 11 210
3lsp-assembly1.cif.gz_A crystal structure of dest bound to descb promoter and oleoyl-coa 0.9026 11 210
3lsp-assembly1.cif.gz_A crystal structure of dest bound to descb promoter and oleoyl-coa 0.8982 11 210
3lsj-assembly1.cif.gz_A crystal structure of dest in complex with palmitoyl-coa 0.8926 11 212
ID Description Score Start End Superfamily
3o8gA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9707 17 61 1.10.10.60
4xk4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9626 19 68 1.10.10.60
4xk4D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9621 19 68 1.10.10.60
4xk4B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9607 19 68 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9603 19 65 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1X2F166-F1-model_v4 TetR family transcriptional regulator 0.9619 24 213 GO:0003677
GO:0006355
AF-A0A6H1A0C4-F1-model_v4 TetR family transcriptional regulator 0.9597 1 213 GO:0003677
GO:0006355
AF-A0A2N1YJD5-F1-model_v4 DesT tetracyclin repressor-like C-terminal domain-containing protein 0.9569 95 211 GO:0003677
AF-A0A6H1A0C4-F1-model_v4 TetR family transcriptional regulator 0.9554 1 213 GO:0003677
GO:0006355
AF-A0A1X2F166-F1-model_v4 TetR family transcriptional regulator 0.952 24 213 GO:0003677
GO:0006355

Map