F382246

General Info

Members Datasets Scaffolds Average Seq Length
278 187 245 365

Family's Representative Sequence

Representative Sequence 3300005466|Ga0070685_10044270|Ga0070685_100442702
Length 356
Sequence MKIKDVVTSLEAIAPLSLQENYDNAGLITGDENADCTSILVSLDATPAVVDEAVKKGCNLIVSHHPIVFSGLKKITGKNYVQRAVIKAIKNDIALYAIHTNLDNVLGGVNGKIAELIGLKNISVLAPKENQLKKLFTFIPTTHADKVRQAIFDAGGGHIGNYEECSFNAEGFGTFKGGLNTDPYVGKPGKLHMENEIKVEVIFPGWLEGRIIKSLLAAHPYEEVAYDIIRLENRYLSIGSGVIGELKEPVNEKAFLQNLKEKFKLKVIKHTELLNKKIAKVAVCGGAGSFLISNATSDIKYHEFFDANDKILIADIGHYESEQFTINLLQEFLELKFPTFAVLKTEVNTNPVRYFL

Samples

Sample ID Description Type Environment
1 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
2 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
3 2738541283 Pedobacter sp. OK701 Isolate Unclassified
4 2738541284 Pedobacter sp. YR016 Isolate Unclassified
5 2738541302 Pedobacter sp. CF074 Isolate Unclassified
6 2738543023 Pedobacter sp. OK628 Isolate Unclassified
7 2739367651 Pedobacter sp. OK291 Isolate Unclassified
8 2739367656 Pedobacter sp. CF523 Isolate Unclassified
9 2739367663 Pedobacter sp. YR510 Isolate Unclassified
10 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
11 2818991437 Pedobacter terrae 518 Isolate Unclassified
12 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
13 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
14 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
15 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
16 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
17 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
18 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
19 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
20 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
21 2895498888 Pseudoxanthomonas sp. SGD-10 Isolate Rhizosphere
22 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
23 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
24 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
25 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
26 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
27 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
28 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
29 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
30 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
31 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
32 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
33 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
34 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
35 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
36 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
37 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
38 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
39 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
40 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
41 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
42 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
43 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
44 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
45 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
48 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
49 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
50 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
51 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
52 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
53 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
54 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
55 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
56 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
57 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
58 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
59 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
60 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
61 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
62 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
63 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
64 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
65 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
68 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
69 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
70 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
71 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
72 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
73 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
74 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
75 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
76 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
77 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
78 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
79 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
82 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
83 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
84 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
85 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
88 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
89 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
90 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
91 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
92 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
93 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
94 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
95 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
96 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
97 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
98 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
99 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
100 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
101 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
103 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
104 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
105 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
106 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
107 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
108 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
110 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
111 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
134 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
135 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
136 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
137 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
138 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
139 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
140 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
141 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
142 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
143 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
144 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
145 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
146 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
147 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
148 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
149 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
150 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
151 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
152 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
153 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
154 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
155 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
156 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
157 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
158 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
159 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
162 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
163 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
164 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
165 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
166 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
167 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
168 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
169 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
172 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
179 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
180 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
185 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
186 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
187 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.13
Metatranscriptomes 0
Isolates 11.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.71
Nodule 0
Rhizoplane 0.72
Rhizosphere 78.78
Stem 0
Stem Tuber 0
Unclassified 10.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10002565 3300001989 Bacteria 7003
2 JGI24737J22298_10007916 3300001990 Bacteria 3576
3 JGI24744J21845_10001419 3300002077 Bacteria 4756
4 JGI25162J39368_1000905 3300002737 Bacteria 19187
5 JGI25164J39214_1001944 3300002772 Bacteria 3782
6 JGI25152J39213_1000028 3300002773 Bacteria 100367
7 JGI25150J39212_1000006 3300002774 Bacteria 257228
8 JGI25151J46595_10000024 3300003187 Bacteria 217596
9 JGI25165J46597_1001663 3300003214 Bacteria 10185
10 JGI25153J46596_10000026 3300003215 Bacteria 217245
11 rootH2_10000579 3300003320 Bacteria 178428
12 rootL2_10192071 3300003322 Bacteria 5167
13 rootH1_10029505 3300003323 Bacteria 1315
14 rootH1_10031292 3300003323 Bacteria 36054
15 rootH1_10157307 3300003323 Bacteria 4545
16 rootH1_10176100 3300003323 Bacteria 3071
17 Ga0055536_1000002 3300003781 Bacteria 605605
18 Ga0055530_10001554 3300003791 Bacteria 16480
19 Ga0065714_10004541 3300005288 Bacteria 7725
20 Ga0065714_10064672 3300005288 Bacteria 24535
21 Ga0065714_10066407 3300005288 Bacteria 6919
22 Ga0065714_10086784 3300005288 Bacteria 2083
23 Ga0065714_10088813 3300005288 Bacteria 2002
24 Ga0065714_10137678 3300005288 Bacteria 1196
25 Ga0065704_10000218 3300005289 Bacteria 76484
26 Ga0070658_10000032 3300005327 Bacteria 147726
27 Ga0070676_10000351 3300005328 Bacteria 21115
28 Ga0068868_100015256 3300005338 Bacteria 5679
29 Ga0070660_100023561 3300005339 Bacteria 4561
30 Ga0070660_100045444 3300005339 Bacteria 3362
31 Ga0070673_100009515 3300005364 Bacteria 6524
32 Ga0070673_100056188 3300005364 Bacteria 3104
33 Ga0070659_100013580 3300005366 Bacteria 6065
34 Ga0070659_100023409 3300005366 Bacteria 4726
35 Ga0070678_100233005 3300005456 Bacteria 1536
36 Ga0068867_100002312 3300005459 Bacteria 13412
37 Ga0070685_10044270 3300005466 Bacteria 2547
38 Ga0070698_100334491 3300005471 Bacteria 1446
39 Ga0068853_100155820 3300005539 Bacteria 2058
40 Ga0070665_100000012 3300005548 Bacteria 508937
41 Ga0068855_100002062 3300005563 Bacteria 24904
42 Ga0068855_100002296 3300005563 Bacteria 23631
43 Ga0068855_100084392 3300005563 Bacteria 3677
44 Ga0068857_100102356 3300005577 Bacteria 2571
45 Ga0068854_100075153 3300005578 Bacteria 2480
46 Ga0068856_100000031 3300005614 Bacteria 126668
47 Ga0068856_100005041 3300005614 Bacteria 13076
48 Ga0068856_100039411 3300005614 Bacteria 4639
49 Ga0068852_100008052 3300005616 Bacteria 7730
50 Ga0068852_100096474 3300005616 Bacteria 2658
51 Ga0068852_100148823 3300005616 Bacteria 2175
52 Ga0068858_100093080 3300005842 Bacteria 2806
53 Ga0075366_10000112 3300006195 Bacteria 33220
54 Ga0097621_100000200 3300006237 Bacteria 38903
55 Ga0075370_10023668 3300006353 Bacteria 3385
56 Ga0068871_100000174 3300006358 Bacteria 43345
57 Ga0075428_100029066 3300006844 Bacteria 6117
58 Ga0075428_100137778 3300006844 Bacteria 2653
59 Ga0075428_100156717 3300006844 Bacteria 2473
60 Ga0075431_100192808 3300006847 Bacteria 2087
61 Ga0075429_100003600 3300006880 Bacteria 13208
62 Ga0075429_100054066 3300006880 Unclassified 3493
63 Ga0068865_100000100 3300006881 Bacteria 44815
64 Ga0105240_10075824 3300009093 Bacteria 4148
65 Ga0105240_10139485 3300009093 Bacteria 2900
66 Ga0105240_10558666 3300009093 Bacteria 1265
67 Ga0111539_10032644 3300009094 Bacteria 6321
68 Ga0105241_10024940 3300009174 Bacteria 4443
69 Ga0105237_10000311 3300009545 Bacteria 67880
70 Ga0105237_10002852 3300009545 Bacteria 21019
71 Ga0105237_10005100 3300009545 Bacteria 14908
72 Ga0105237_10034912 3300009545 Bacteria 5089
73 Ga0105237_10315692 3300009545 Bacteria 1566
74 Ga0105238_10012129 3300009551 Bacteria 8685
75 Ga0105249_10182461 3300009553 Bacteria 2043
76 Ga0105239_10000014 3300010375 Bacteria 325391
77 Ga0105239_10169658 3300010375 Bacteria 2440
78 Ga0105239_10626514 3300010375 Bacteria 1228
79 Ga0157373_10014125 3300013100 Bacteria 5853
80 Ga0157373_10024679 3300013100 Bacteria 4355
81 Ga0157371_10000367 3300013102 Bacteria 56890
82 Ga0157371_10000991 3300013102 Bacteria 31396
83 Ga0157371_10001608 3300013102 Bacteria 23170
84 Ga0157371_10001836 3300013102 Bacteria 21402
85 Ga0157371_10017608 3300013102 Bacteria 5302
86 Ga0157370_10008022 3300013104 Bacteria 11440
87 Ga0157370_10008058 3300013104 Bacteria 11408
88 Ga0157370_10023247 3300013104 Bacteria 6155
89 Ga0157370_10083242 3300013104 Bacteria 3009
90 Ga0157370_10086791 3300013104 Bacteria 2939
91 Ga0157370_10177247 3300013104 Bacteria 1981
92 Ga0157369_10000158 3300013105 Bacteria 96395
93 Ga0157374_10001143 3300013296 Bacteria 22611
94 Ga0157374_10005171 3300013296 Bacteria 10943
95 Ga0157378_10165117 3300013297 Bacteria 2074
96 Ga0163162_10000011 3300013306 Bacteria 299877
97 Ga0163162_10000062 3300013306 Bacteria 105579
98 Ga0163162_10001218 3300013306 Bacteria 24051
99 Ga0157372_10000327 3300013307 Bacteria 52004
100 Ga0157375_10017560 3300013308 Bacteria 6460
101 Ga0157375_10141921 3300013308 Bacteria 2530
102 Ga0157375_10142737 3300013308 Bacteria 2523
103 Ga0163163_10331251 3300014325 Bacteria 1577
104 Ga0157380_10095994 3300014326 Bacteria 2457
105 Ga0157380_10152210 3300014326 Bacteria 2001
106 Ga0182008_10000025 3300014497 Bacteria 191222
107 Ga0182008_10000046 3300014497 Bacteria 111777
108 Ga0182008_10001521 3300014497 Bacteria 15458
109 Ga0157376_10051572 3300014969 Bacteria 3418
110 Ga0182006_1002324 3300015261 Bacteria 10455
111 Ga0182006_1002665 3300015261 Bacteria 9608
112 Ga0182006_1007426 3300015261 Bacteria 5016
113 Ga0182007_10000008 3300015262 Bacteria 332953
114 Ga0182007_10027310 3300015262 Bacteria 1969
115 Ga0183373_1002 3300015682 Bacteria 990153
116 Ga0163161_10000622 3300017792 Bacteria 28395
117 Ga0163161_10002190 3300017792 Bacteria 14093
118 Ga0209563_105321 3300025230 Bacteria 2350
119 Ga0207427_100159 3300025231 Bacteria 76256
120 Ga0209437_100021 3300025233 Bacteria 646400
121 Ga0207425_1000003 3300025245 Bacteria 1145342
122 Ga0209026_1001121 3300025250 Bacteria 12670
123 Ga0209129_1000022 3300025258 Bacteria 440876
124 Ga0209233_1000264 3300025261 Bacteria 78251
125 Ga0209676_1000022 3300025292 Bacteria 605659
126 Ga0209025_1000007 3300025294 Bacteria 1145109
127 Ga0209758_1000012 3300025297 Bacteria 949866
128 Ga0209050_1000020 3300025298 Bacteria 605671
129 Ga0207647_10000041 3300025904 Bacteria 92367
130 Ga0207647_10015423 3300025904 Bacteria 5239
131 Ga0207645_10000144 3300025907 Bacteria 55568
132 Ga0207705_10000032 3300025909 Bacteria 224376
133 Ga0207705_10035488 3300025909 Bacteria 3567
134 Ga0207705_10182812 3300025909 Bacteria 1583
135 Ga0207654_10009262 3300025911 Bacteria 4996
136 Ga0207695_10060801 3300025913 Bacteria 3908
137 Ga0207695_10121984 3300025913 Bacteria 2573
138 Ga0207671_10000991 3300025914 Bacteria 34985
139 Ga0207671_10015259 3300025914 Bacteria 6030
140 Ga0207671_10151375 3300025914 Bacteria 1792
141 Ga0207657_10023097 3300025919 Bacteria 5800
142 Ga0207690_10000258 3300025932 Bacteria 38278
143 Ga0207690_10026294 3300025932 Bacteria 3664
144 Ga0207670_10056794 3300025936 Bacteria 2652
145 Ga0207704_10000125 3300025938 Bacteria 41739
146 Ga0207667_10001302 3300025949 Bacteria 31255
147 Ga0207667_10012655 3300025949 Bacteria 9696
148 Ga0207712_10071409 3300025961 Bacteria 2497
149 Ga0207658_10125429 3300025986 Bacteria 2054
150 Ga0207677_10027999 3300026023 Bacteria 3558
151 Ga0207703_10221198 3300026035 Bacteria 1693
152 Ga0207639_10129239 3300026041 Bacteria 2089
153 Ga0207702_10000071 3300026078 Bacteria 114394
154 Ga0207702_10016772 3300026078 Bacteria 6064
155 Ga0207702_10028982 3300026078 Bacteria 4603
156 Ga0207648_10071343 3300026089 Bacteria 3027
157 Ga0207674_10031606 3300026116 Bacteria 5559
158 Ga0207698_10030733 3300026142 Bacteria 3867
159 Ga0207698_10075517 3300026142 Bacteria 2694
160 Ga0268266_10000039 3300028379 Bacteria 324579
161 Ga0307517_10000363 3300028786 Bacteria 78039
162 Ga0265338_10049694 3300028800 Bacteria 3798
163 Ga0316177_1045378 3300030731 Bacteria 18115
164 Ga0316176_1049005 3300030732 Bacteria 3512
165 Ga0316183_1016718 3300030742 Bacteria 50913
166 Ga0316181_1005222 3300030744 Bacteria 3442
167 Ga0265327_10006856 3300031251 Bacteria 8974
168 Ga0265327_10009982 3300031251 Bacteria 6757
169 Ga0307408_100000261 3300031548 Bacteria 53515
170 Ga0307408_100000415 3300031548 Bacteria 38296
171 Ga0307408_100001841 3300031548 Bacteria 15452
172 Ga0307405_10000014 3300031731 Bacteria 226733
173 Ga0307405_10002557 3300031731 Bacteria 8071
174 Ga0307407_10000002 3300031903 Bacteria 323084
175 Ga0307412_10000001 3300031911 Bacteria 822691
176 Ga0307412_10002759 3300031911 Bacteria 9759
177 Ga0307412_10005666 3300031911 Bacteria 7018
178 Ga0307412_10090514 3300031911 Bacteria 2139
179 Ga0307409_100004781 3300031995 Bacteria 7680
180 Ga0307416_100000005 3300032002 Bacteria 477728
181 Ga0307414_10001417 3300032004 Bacteria 12443
182 Ga0307414_10012224 3300032004 Bacteria 5066
183 Ga0307414_10028584 3300032004 Bacteria 3619
184 Ga0307414_10050560 3300032004 Bacteria 2879
185 Ga0307414_10067793 3300032004 Bacteria 2558
186 Ga0307414_10288507 3300032004 Bacteria 1382
187 Ga0307411_10007391 3300032005 Bacteria 5592
188 Ga0307510_10000312 3300033180 Bacteria 44881
189 Ga0395899_0012901 3300037312 Bacteria 6397
190 Ga0395900_0000204 3300037418 Bacteria 92834
191 Ga0395900_0001089 3300037418 Bacteria 34541
192 Ga0395900_0017730 3300037418 Bacteria 7266
193 Ga0395898_0021063 3300037466 Bacteria 6614
194 Ga0395898_0466278 3300037466 Bacteria 1202
195 Ga0395905_0000011 3300037471 Bacteria 424563
196 Ga0395905_0000933 3300037471 Bacteria 37728
197 Ga0395905_0002419 3300037471 Bacteria 20715
198 Ga0395901_0000828 3300038443 Bacteria 34120
199 Ga0395901_0007021 3300038443 Bacteria 11384
200 Ga0436365_1672375 3300039437 Bacteria 3499
201 Ga0436361_1045134 3300039447 Bacteria 6676
202 Ga0451576_0000020 3300045051 Bacteria 529568
203 Ga0495650_0000330 3300046471 Bacteria 84849
204 Ga0495585_0000201 3300046492 Bacteria 62206
205 Ga0495606_0000036 3300046507 Bacteria 234596
206 Ga0495606_0010311 3300046507 Bacteria 7774
207 Ga0495606_0099877 3300046507 Bacteria 1769
208 Ga0495606_0154426 3300046507 Bacteria 1344
209 Ga0495610_0001404 3300046512 Bacteria 21399
210 Ga0495616_0005563 3300046513 Bacteria 7733
211 Ga0495631_0010752 3300046518 Bacteria 4524
212 Ga0495632_0096778 3300046519 Bacteria 1394
213 Ga0495644_0003204 3300046523 Bacteria 6463
214 Ga0495648_0010483 3300046524 Bacteria 7056
215 Ga0495633_0000012 3300046558 Bacteria 267875
216 Ga0495633_0002507 3300046558 Bacteria 12917
217 Ga0495633_0044001 3300046558 Bacteria 2117
218 Ga0495625_0000007 3300046660 Bacteria 565749
219 Ga0495625_0004905 3300046660 Bacteria 12459
220 Ga0495625_0131009 3300046660 Bacteria 1699
221 Ga0495625_0150923 3300046660 Bacteria 1562
222 Ga0495661_0001116 3300046665 Bacteria 23480
223 Ga0495671_0099700 3300046692 Bacteria 1420
224 Ga0495649_0000038 3300046694 Bacteria 128764
225 Ga0495687_001024 3300047443 Bacteria 27852
226 Ga0495687_002416 3300047443 Bacteria 15041
227 Ga0495686_0000152 3300047472 Bacteria 133713
228 Ga0495686_0026116 3300047472 Bacteria 3822
229 Ga0495686_0049109 3300047472 Bacteria 2656
230 Ga0496115_0121446 3300048918 Bacteria 2150
231 Ga0496122_0000783 3300048925 Bacteria 61156
232 Ga0496123_0002343 3300048926 Bacteria 23754
233 Ga0496125_0069088 3300048928 Bacteria 2774
234 Ga0496126_0199225 3300048929 Bacteria 1692
235 Ga0495678_015564 3300049459 Bacteria 3497
236 Ga0501223_002196 3300049663 Bacteria 4378
237 Ga0501241_005988 3300049758 Bacteria 2255
238 nmdc:mga0k408_4307_c1 3300050493 Bacteria 7559
239 nmdc:mga0k408_63_c1 3300050493 Bacteria 52809
240 nmdc:mga06r32_393144_c1 3300050510 Unclassified 1369
241 nmdc:mga08y16_193350_c1 3300050511 Bacteria 2110
242 Ga0500635_0000512 3300053080 Bacteria 10678
243 Ga0500651_0012935 3300053093 Bacteria 5070
244 Ga0500608_000304 3300053122 Bacteria 18980
245 Ga0500624_000160 3300053157 Bacteria 27540

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005466 Ga0070685_10044270 Ga0070685_100442702 356
2 3300013308 Ga0157375_10141921 Ga0157375_101419211 356
3 3300025936 Ga0207670_10056794 Ga0207670_100567942 356
4 3300025961 Ga0207712_10071409 Ga0207712_100714092 356
5 3300025986 Ga0207658_10125429 Ga0207658_101254292 356
6 3300006844 Ga0075428_100029066 Ga0075428_1000290662 360
7 3300006880 Ga0075429_100003600 Ga0075429_1000036009 360
8 iso_pu_bacteria 2890804823 2890804995 360
9 iso_pu_bacteria 2585427687 2586207146 361
10 iso_pu_bacteria 2599185184 2599480514 361
11 iso_pu_bacteria 2738541283 2738755766 361
12 iso_pu_bacteria 2738541284 2738761568 361
13 iso_pu_bacteria 2738541302 2738852729 361
14 iso_pu_bacteria 2738543023 2739302913 361
15 iso_pu_bacteria 2739367651 2739586657 361
16 iso_pu_bacteria 2739367656 2739614994 361
17 iso_pu_bacteria 2739367663 2739645885 361
18 iso_pu_bacteria 2775506987 2776615796 361
19 iso_pu_bacteria 2818991437 2819547094 361
20 iso_pu_bacteria 2842722452 2842727159 361
21 iso_pu_bacteria 2842903701 2842905008 361
22 iso_pu_bacteria 2842909656 2842910838 361
23 iso_pu_bacteria 2849281842 2849284052 361
24 iso_pu_bacteria 2852623160 2852626594 361
25 iso_pu_bacteria 2852627209 2852628005 361
26 iso_pu_bacteria 2857627736 2857628070 361
27 iso_pu_bacteria 2884933994 2884935024 361
28 iso_pu_bacteria 2895498888 2895503490 361
29 iso_pu_bacteria 2896317667 2896320298 361
30 iso_pu_bacteria 2896344016 2896347324 361
31 iso_pu_bacteria 2902048731 2902049582 361
32 iso_pu_bacteria 2904445276 2904447039 361
33 iso_pu_bacteria 2919186247 2919188363 361
34 iso_pu_bacteria 2919437846 2919439626 361
35 iso_pu_bacteria 2928078545 2928081262 361
36 iso_pu_bacteria 2928147474 2928150560 361
37 iso_pu_bacteria 2939664404 2939667552 361
38 iso_pu_bacteria 2945997725 2945998065 361
39 iso_pu_bacteria 2954016120 2954020518 361
40 iso_pu_bacteria 3003233435 3003237081 361
41 3300003322 rootL2_10192071 rootL2_101920713 364
42 3300005456 Ga0070678_100233005 Ga0070678_1002330051 364
43 3300005577 Ga0068857_100102356 Ga0068857_1001023563 364
44 3300005614 Ga0068856_100039411 Ga0068856_1000394113 364
45 3300009094 Ga0111539_10032644 Ga0111539_100326446 364
46 3300014325 Ga0163163_10331251 Ga0163163_103312512 364
47 3300026078 Ga0207702_10028982 Ga0207702_100289823 364
48 3300026116 Ga0207674_10031606 Ga0207674_100316064 364
49 3300031251 Ga0265327_10006856 Ga0265327_100068566 364
50 3300031251 Ga0265327_10009982 Ga0265327_100099826 364
51 3300037471 Ga0395905_0000011 Ga0395905_0000011_202475_203569 364
52 3300050511 nmdc:mga08y16_193350_c1 nmdc:mga08y16_193350_c1_835_1941 364
53 3300001989 JGI24739J22299_10002565 JGI24739J22299_100025652 365
54 3300001990 JGI24737J22298_10007916 JGI24737J22298_100079161 365
55 3300002077 JGI24744J21845_10001419 JGI24744J21845_100014196 365
56 3300002737 JGI25162J39368_1000905 JGI25162J39368_100090517 365
57 3300002772 JGI25164J39214_1001944 JGI25164J39214_10019442 365
58 3300002773 JGI25152J39213_1000028 JGI25152J39213_100002865 365
59 3300002774 JGI25150J39212_1000006 JGI25150J39212_1000006126 365
60 3300003187 JGI25151J46595_10000024 JGI25151J46595_1000002465 365
61 3300003214 JGI25165J46597_1001663 JGI25165J46597_10016634 365
62 3300003215 JGI25153J46596_10000026 JGI25153J46596_10000026127 365
63 3300003320 rootH2_10000579 rootH2_1000057938 365
64 3300003323 rootH1_10029505 rootH1_100295051 365
65 3300003323 rootH1_10031292 rootH1_1003129217 365
66 3300003323 rootH1_10157307 rootH1_101573072 365
67 3300003323 rootH1_10176100 rootH1_101761003 365
68 3300003781 Ga0055536_1000002 Ga0055536_1000002218 365
69 3300003791 Ga0055530_10001554 Ga0055530_1000155414 365
70 3300005288 Ga0065714_10004541 Ga0065714_100045418 365
71 3300005288 Ga0065714_10064672 Ga0065714_100646721 365
72 3300005288 Ga0065714_10066407 Ga0065714_100664079 365
73 3300005288 Ga0065714_10086784 Ga0065714_100867844 365
74 3300005288 Ga0065714_10088813 Ga0065714_100888133 365
75 3300005288 Ga0065714_10137678 Ga0065714_101376781 365
76 3300005289 Ga0065704_10000218 Ga0065704_1000021874 365
77 3300005327 Ga0070658_10000032 Ga0070658_1000003242 365
78 3300005328 Ga0070676_10000351 Ga0070676_1000035115 365
79 3300005338 Ga0068868_100015256 Ga0068868_1000152564 365
80 3300005339 Ga0070660_100023561 Ga0070660_1000235613 365
81 3300005339 Ga0070660_100045444 Ga0070660_1000454442 365
82 3300005364 Ga0070673_100009515 Ga0070673_1000095153 365
83 3300005364 Ga0070673_100056188 Ga0070673_1000561883 365
84 3300005366 Ga0070659_100013580 Ga0070659_1000135806 365
85 3300005366 Ga0070659_100023409 Ga0070659_1000234094 365
86 3300005459 Ga0068867_100002312 Ga0068867_10000231211 365
87 3300005471 Ga0070698_100334491 Ga0070698_1003344911 365
88 3300005539 Ga0068853_100155820 Ga0068853_1001558201 365
89 3300005548 Ga0070665_100000012 Ga0070665_100000012430 365
90 3300005563 Ga0068855_100002062 Ga0068855_10000206218 365
91 3300005563 Ga0068855_100002296 Ga0068855_10000229616 365
92 3300005563 Ga0068855_100084392 Ga0068855_1000843924 365
93 3300005578 Ga0068854_100075153 Ga0068854_1000751533 365
94 3300005614 Ga0068856_100000031 Ga0068856_100000031111 365
95 3300005614 Ga0068856_100005041 Ga0068856_10000504115 365
96 3300005616 Ga0068852_100008052 Ga0068852_1000080521 365
97 3300005616 Ga0068852_100096474 Ga0068852_1000964742 365
98 3300005616 Ga0068852_100148823 Ga0068852_1001488233 365
99 3300005842 Ga0068858_100093080 Ga0068858_1000930804 365
100 3300006195 Ga0075366_10000112 Ga0075366_1000011221 365
101 3300006237 Ga0097621_100000200 Ga0097621_10000020039 365
102 3300006353 Ga0075370_10023668 Ga0075370_100236684 365
103 3300006358 Ga0068871_100000174 Ga0068871_10000017413 365
104 3300006844 Ga0075428_100137778 Ga0075428_1001377781 365
105 3300006844 Ga0075428_100156717 Ga0075428_1001567172 365
106 3300006847 Ga0075431_100192808 Ga0075431_1001928083 365
107 3300006880 Ga0075429_100054066 Ga0075429_1000540664 365
108 3300006881 Ga0068865_100000100 Ga0068865_10000010034 365
109 3300009093 Ga0105240_10075824 Ga0105240_100758242 365
110 3300009093 Ga0105240_10139485 Ga0105240_101394853 365
111 3300009093 Ga0105240_10558666 Ga0105240_105586661 365
112 3300009174 Ga0105241_10024940 Ga0105241_100249405 365
113 3300009545 Ga0105237_10000311 Ga0105237_1000031137 365
114 3300009545 Ga0105237_10002852 Ga0105237_100028525 365
115 3300009545 Ga0105237_10005100 Ga0105237_1000510011 365
116 3300009545 Ga0105237_10034912 Ga0105237_100349124 365
117 3300009545 Ga0105237_10315692 Ga0105237_103156921 365
118 3300009551 Ga0105238_10012129 Ga0105238_1001212910 365
119 3300009553 Ga0105249_10182461 Ga0105249_101824613 365
120 3300010375 Ga0105239_10000014 Ga0105239_10000014290 365
121 3300010375 Ga0105239_10169658 Ga0105239_101696583 365
122 3300010375 Ga0105239_10626514 Ga0105239_106265141 365
123 3300013100 Ga0157373_10014125 Ga0157373_100141251 365
124 3300013100 Ga0157373_10024679 Ga0157373_100246795 365
125 3300013102 Ga0157371_10000367 Ga0157371_100003671 365
126 3300013102 Ga0157371_10000991 Ga0157371_1000099127 365
127 3300013102 Ga0157371_10001608 Ga0157371_100016081 365
128 3300013102 Ga0157371_10001836 Ga0157371_1000183614 365
129 3300013102 Ga0157371_10017608 Ga0157371_100176086 365
130 3300013104 Ga0157370_10008022 Ga0157370_100080221 365
131 3300013104 Ga0157370_10008058 Ga0157370_100080584 365
132 3300013104 Ga0157370_10023247 Ga0157370_100232474 365
133 3300013104 Ga0157370_10083242 Ga0157370_100832423 365
134 3300013104 Ga0157370_10086791 Ga0157370_100867911 365
135 3300013104 Ga0157370_10177247 Ga0157370_101772472 365
136 3300013105 Ga0157369_10000158 Ga0157369_1000015823 365
137 3300013296 Ga0157374_10001143 Ga0157374_1000114321 365
138 3300013296 Ga0157374_10005171 Ga0157374_100051719 365
139 3300013297 Ga0157378_10165117 Ga0157378_101651172 365
140 3300013306 Ga0163162_10000011 Ga0163162_1000001186 365
141 3300013306 Ga0163162_10000062 Ga0163162_1000006261 365
142 3300013306 Ga0163162_10001218 Ga0163162_1000121817 365
143 3300013307 Ga0157372_10000327 Ga0157372_100003279 365
144 3300013308 Ga0157375_10017560 Ga0157375_100175606 365
145 3300013308 Ga0157375_10142737 Ga0157375_101427373 365
146 3300014326 Ga0157380_10095994 Ga0157380_100959941 365
147 3300014326 Ga0157380_10152210 Ga0157380_101522101 365
148 3300014497 Ga0182008_10000025 Ga0182008_1000002519 365
149 3300014497 Ga0182008_10000046 Ga0182008_1000004632 365
150 3300014497 Ga0182008_10001521 Ga0182008_1000152113 365
151 3300014969 Ga0157376_10051572 Ga0157376_100515724 365
152 3300015261 Ga0182006_1002324 Ga0182006_100232410 365
153 3300015261 Ga0182006_1002665 Ga0182006_10026659 365
154 3300015261 Ga0182006_1007426 Ga0182006_10074263 365
155 3300015262 Ga0182007_10000008 Ga0182007_1000000866 365
156 3300015262 Ga0182007_10027310 Ga0182007_100273101 365
157 3300015682 Ga0183373_1002 Ga0183373_1002336 365
158 3300017792 Ga0163161_10000622 Ga0163161_100006224 365
159 3300017792 Ga0163161_10002190 Ga0163161_1000219013 365
160 3300025230 Ga0209563_105321 Ga0209563_1053211 365
161 3300025231 Ga0207427_100159 Ga0207427_10015948 365
162 3300025233 Ga0209437_100021 Ga0209437_10002168 365
163 3300025245 Ga0207425_1000003 Ga0207425_1000003124 365
164 3300025250 Ga0209026_1001121 Ga0209026_10011213 365
165 3300025258 Ga0209129_1000022 Ga0209129_1000022123 365
166 3300025261 Ga0209233_1000264 Ga0209233_100026468 365
167 3300025292 Ga0209676_1000022 Ga0209676_1000022322 365
168 3300025294 Ga0209025_1000007 Ga0209025_1000007123 365
169 3300025297 Ga0209758_1000012 Ga0209758_1000012124 365
170 3300025298 Ga0209050_1000020 Ga0209050_1000020217 365
171 3300025904 Ga0207647_10000041 Ga0207647_1000004176 365
172 3300025904 Ga0207647_10015423 Ga0207647_100154235 365
173 3300025907 Ga0207645_10000144 Ga0207645_1000014420 365
174 3300025909 Ga0207705_10000032 Ga0207705_10000032179 365
175 3300025909 Ga0207705_10035488 Ga0207705_100354884 365
176 3300025909 Ga0207705_10182812 Ga0207705_101828121 365
177 3300025911 Ga0207654_10009262 Ga0207654_100092624 365
178 3300025913 Ga0207695_10060801 Ga0207695_100608013 365
179 3300025913 Ga0207695_10121984 Ga0207695_101219842 365
180 3300025914 Ga0207671_10000991 Ga0207671_1000099124 365
181 3300025914 Ga0207671_10015259 Ga0207671_100152593 365
182 3300025914 Ga0207671_10151375 Ga0207671_101513752 365
183 3300025919 Ga0207657_10023097 Ga0207657_100230972 365
184 3300025932 Ga0207690_10000258 Ga0207690_100002583 365
185 3300025932 Ga0207690_10026294 Ga0207690_100262943 365
186 3300025938 Ga0207704_10000125 Ga0207704_1000012529 365
187 3300025949 Ga0207667_10001302 Ga0207667_1000130222 365
188 3300025949 Ga0207667_10012655 Ga0207667_100126554 365
189 3300026023 Ga0207677_10027999 Ga0207677_100279993 365
190 3300026035 Ga0207703_10221198 Ga0207703_102211982 365
191 3300026041 Ga0207639_10129239 Ga0207639_101292392 365
192 3300026078 Ga0207702_10000071 Ga0207702_10000071112 365
193 3300026078 Ga0207702_10016772 Ga0207702_100167722 365
194 3300026089 Ga0207648_10071343 Ga0207648_100713433 365
195 3300026142 Ga0207698_10030733 Ga0207698_100307332 365
196 3300026142 Ga0207698_10075517 Ga0207698_100755172 365
197 3300028379 Ga0268266_10000039 Ga0268266_1000003940 365
198 3300028786 Ga0307517_10000363 Ga0307517_1000036331 365
199 3300028800 Ga0265338_10049694 Ga0265338_100496944 365
200 3300030731 Ga0316177_1045378 Ga0316177_104537816 365
201 3300030732 Ga0316176_1049005 Ga0316176_10490053 365
202 3300030742 Ga0316183_1016718 Ga0316183_101671840 365
203 3300030744 Ga0316181_1005222 Ga0316181_10052222 365
204 3300031548 Ga0307408_100000261 Ga0307408_10000026135 365
205 3300031548 Ga0307408_100000415 Ga0307408_10000041521 365
206 3300031548 Ga0307408_100001841 Ga0307408_1000018412 365
207 3300031731 Ga0307405_10000014 Ga0307405_1000001417 365
208 3300031731 Ga0307405_10002557 Ga0307405_100025578 365
209 3300031903 Ga0307407_10000002 Ga0307407_10000002184 365
210 3300031911 Ga0307412_10000001 Ga0307412_10000001554 365
211 3300031911 Ga0307412_10002759 Ga0307412_100027593 365
212 3300031911 Ga0307412_10005666 Ga0307412_100056663 365
213 3300031911 Ga0307412_10090514 Ga0307412_100905143 365
214 3300031995 Ga0307409_100004781 Ga0307409_1000047814 365
215 3300032002 Ga0307416_100000005 Ga0307416_100000005186 365
216 3300032004 Ga0307414_10001417 Ga0307414_100014173 365
217 3300032004 Ga0307414_10012224 Ga0307414_100122241 365
218 3300032004 Ga0307414_10028584 Ga0307414_100285844 365
219 3300032004 Ga0307414_10050560 Ga0307414_100505604 365
220 3300032004 Ga0307414_10067793 Ga0307414_100677933 365
221 3300032004 Ga0307414_10288507 Ga0307414_102885071 365
222 3300032005 Ga0307411_10007391 Ga0307411_100073912 365
223 3300033180 Ga0307510_10000312 Ga0307510_1000031227 365
224 3300037312 Ga0395899_0012901 Ga0395899_0012901_751_1848 365
225 3300037418 Ga0395900_0000204 Ga0395900_0000204_82228_83325 365
226 3300037418 Ga0395900_0001089 Ga0395900_0001089_12848_13945 365
227 3300037418 Ga0395900_0017730 Ga0395900_0017730_4968_6065 365
228 3300037466 Ga0395898_0021063 Ga0395898_0021063_1287_2384 365
229 3300037466 Ga0395898_0466278 Ga0395898_0466278_57_1154 365
230 3300037471 Ga0395905_0000933 Ga0395905_0000933_19719_20816 365
231 3300037471 Ga0395905_0002419 Ga0395905_0002419_16032_17129 365
232 3300038443 Ga0395901_0000828 Ga0395901_0000828_17365_18462 365
233 3300038443 Ga0395901_0007021 Ga0395901_0007021_2144_3241 365
234 3300039437 Ga0436365_1672375 Ga0436365_1672375_338_1435 365
235 3300039447 Ga0436361_1045134 Ga0436361_1045134_4274_5371 365
236 3300045051 Ga0451576_0000020 Ga0451576_0000020_135448_136545 365
237 3300046471 Ga0495650_0000330 Ga0495650_0000330_12830_13927 365
238 3300046492 Ga0495585_0000201 Ga0495585_0000201_39114_40211 365
239 3300046507 Ga0495606_0000036 Ga0495606_0000036_188754_189851 365
240 3300046507 Ga0495606_0010311 Ga0495606_0010311_175_1272 365
241 3300046507 Ga0495606_0099877 Ga0495606_0099877_38_1135 365
242 3300046507 Ga0495606_0154426 Ga0495606_0154426_136_1233 365
243 3300046512 Ga0495610_0001404 Ga0495610_0001404_10374_11471 365
244 3300046513 Ga0495616_0005563 Ga0495616_0005563_289_1386 365
245 3300046518 Ga0495631_0010752 Ga0495631_0010752_3040_4137 365
246 3300046519 Ga0495632_0096778 Ga0495632_0096778_77_1174 365
247 3300046523 Ga0495644_0003204 Ga0495644_0003204_642_1739 365
248 3300046524 Ga0495648_0010483 Ga0495648_0010483_5057_6154 365
249 3300046558 Ga0495633_0000012 Ga0495633_0000012_22705_23802 365
250 3300046558 Ga0495633_0002507 Ga0495633_0002507_7889_8986 365
251 3300046558 Ga0495633_0044001 Ga0495633_0044001_400_1497 365
252 3300046660 Ga0495625_0000007 Ga0495625_0000007_528420_529517 365
253 3300046660 Ga0495625_0004905 Ga0495625_0004905_9992_11089 365
254 3300046660 Ga0495625_0131009 Ga0495625_0131009_220_1317 365
255 3300046660 Ga0495625_0150923 Ga0495625_0150923_19_1116 365
256 3300046665 Ga0495661_0001116 Ga0495661_0001116_7518_8615 365
257 3300046692 Ga0495671_0099700 Ga0495671_0099700_184_1281 365
258 3300046694 Ga0495649_0000038 Ga0495649_0000038_36281_37378 365
259 3300047443 Ga0495687_001024 Ga0495687_001024_7470_8567 365
260 3300047443 Ga0495687_002416 Ga0495687_002416_487_1584 365
261 3300047472 Ga0495686_0000152 Ga0495686_0000152_77512_78609 365
262 3300047472 Ga0495686_0026116 Ga0495686_0026116_2002_3099 365
263 3300047472 Ga0495686_0049109 Ga0495686_0049109_1000_2097 365
264 3300048918 Ga0496115_0121446 Ga0496115_0121446_89_1186 365
265 3300048925 Ga0496122_0000783 Ga0496122_0000783_9866_10963 365
266 3300048926 Ga0496123_0002343 Ga0496123_0002343_16349_17446 365
267 3300048928 Ga0496125_0069088 Ga0496125_0069088_1162_2259 365
268 3300048929 Ga0496126_0199225 Ga0496126_0199225_319_1416 365
269 3300049459 Ga0495678_015564 Ga0495678_015564_1835_2932 365
270 3300049663 Ga0501223_002196 Ga0501223_002196_2918_4015 365
271 3300049758 Ga0501241_005988 Ga0501241_005988_359_1456 365
272 3300050493 nmdc:mga0k408_4307_c1 nmdc:mga0k408_4307_c1_3155_4252 365
273 3300050493 nmdc:mga0k408_63_c1 nmdc:mga0k408_63_c1_33567_34664 365
274 3300050510 nmdc:mga06r32_393144_c1 nmdc:mga06r32_393144_c1_106_1203 365
275 3300053080 Ga0500635_0000512 Ga0500635_0000512_6345_7442 365
276 3300053093 Ga0500651_0012935 Ga0500651_0012935_3695_4792 365
277 3300053122 Ga0500608_000304 Ga0500608_000304_16903_18000 365
278 3300053157 Ga0500624_000160 Ga0500624_000160_22085_23182 365

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01784

DUF34_NIF3

Duf34/NIF3 (NGG1p interacting factor 3)

5

342

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nmo-assembly1.cif.gz_A structural genomics, protein ybgi, unknown function 0.8489 1 357
1nmo-assembly1.cif.gz_A structural genomics, protein ybgi, unknown function 0.8457 1 357
2nyd-assembly1.cif.gz_A-3 crystal structure of staphylococcus aureus hypothetical protein sa1388 0.8284 1 360
2fyw-assembly1.cif.gz_A crystal structure of a conserved protein of unknown function from streptococcus pneumoniae 0.8246 1 360
2nyd-assembly1.cif.gz_A-3 crystal structure of staphylococcus aureus hypothetical protein sa1388 0.8209 1 360
ID Description Score Start End Superfamily
af_Q54BW8_1_102_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9509 133 232 3.30.70.120
af_P9WFM1_132_234_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9495 131 231 3.30.70.120
af_Q54BW8_1_102_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9243 133 232 3.30.70.120
af_P9WFM1_132_234_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9233 131 231 3.30.70.120
af_Q2FY14_127_235_3.30.70.120 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8912 128 232 3.30.70.120
ID Description Score Start End GO Terms
AF-A0A348HGP7-F1-model_v4 Uncharacterized protein conserved in bacteria 0.9625 133 232
AF-A0A1F6EWS2-F1-model_v4 NGG1p interacting factor NIF3 0.9621 133 232
AF-A0A5B8KH55-F1-model_v4 NGG1p interacting factor NIF3 0.9555 133 230
AF-A2E2Q9-F1-model_v4 NGG1p interacting factor NIF3 0.9537 132 228
AF-A0A2D7R9G3-F1-model_v4 NGG1p interacting factor NIF3 0.9527 131 232

Feature Viewer

pLDDT pTM Quality
90.44 0.78 High
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Predicted Structure (AlphaFold2)

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