F382035

General Info

Members Datasets Scaffolds Average Seq Length
277 139 554 399

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0020873|Ga0501040_0020873_958_2256
Length 432
Sequence MVILPPFSHFHPAIAAAVPPRASMHLRFTTAGESHGKAFVAVVEGLPAGLPVSAEVVDRDLARRMQGYGRGARMKIERDCIEWLAGVRAGETLGSPVAMLIANRDWDNWQDVMAHGALEPGELRRRRVSRPRPGHADLAGVLKYDRLDARDILERASARETAARVAAGALAKRLLDEFGVEVGSHVVSLGGVMVPRPAELPVPLNDTADRSEVRVLDRSVEPEIVRRIDEAKKAGDTLGGEVEVVARGAVVGLGSHVSWDRKLDGRLAGLLMSIPAVKAVEIGLGVEAARRPGSQVHDAIHAQQPLPPTPGDRRGGFRRQSNNAGGLEGGITTGEPVVVRVAMKPISTLMSPLPTVDLASGEPANAQSERSDVTAVPALGVIAEAMVAIALADAMLEKFGGDSLGEMRRNHQAYLASVGSRWSMARAERRDA

Samples

Sample ID Description Type Environment
1 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
74 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
75 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
76 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
77 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
82 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
83 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
84 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
88 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
89 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
90 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
91 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
92 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
93 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
94 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
97 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
98 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
99 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
100 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
101 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
127 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
128 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
129 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
130 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
131 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
132 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
133 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
134 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
135 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
136 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
137 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
138 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
139 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.28
Metatranscriptomes 0
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.58
Rhizosphere 92.06
Stem 0
Stem Tuber 0
Unclassified 0.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501040_0020873 3300049576 Bacteria 4367
2 Ga0070680_100006166 3300005336 Bacteria 9090
3 Ga0070680_100017388 3300005336 Bacteria 5671
4 Ga0070680_100032291 3300005336 Bacteria 4214
5 Ga0070680_100064197 3300005336 Bacteria 3009
6 Ga0070692_10023491 3300005345 Bacteria 3022
7 Ga0070668_100024558 3300005347 Bacteria 4567
8 Ga0070675_100096507 3300005354 Bacteria 2483
9 Ga0070671_100011392 3300005355 Bacteria 7148
10 Ga0070711_100000072 3300005439 Bacteria 58757
11 Ga0070711_100000870 3300005439 Bacteria 15888
12 Ga0070705_100003237 3300005440 Bacteria 7996
13 Ga0070705_100007536 3300005440 Bacteria 5360
14 Ga0070694_100000741 3300005444 Bacteria 18281
15 Ga0070694_100004704 3300005444 Bacteria 8217
16 Ga0070694_100035166 3300005444 Bacteria 3310
17 Ga0070694_100044722 3300005444 Bacteria 2964
18 Ga0070694_100111395 3300005444 Bacteria 1950
19 Ga0070708_100003009 3300005445 Bacteria 13084
20 Ga0070708_100039071 3300005445 Bacteria 4150
21 Ga0070681_10013384 3300005458 Bacteria 8150
22 Ga0070681_10046319 3300005458 Bacteria 4348
23 Ga0068867_100039508 3300005459 Bacteria 3440
24 Ga0070706_100046612 3300005467 Bacteria 4001
25 Ga0070707_100002698 3300005468 Bacteria 16882
26 Ga0070707_100015993 3300005468 Bacteria 7041
27 Ga0070707_100135283 3300005468 Bacteria 2398
28 Ga0070707_100195934 3300005468 Bacteria 1969
29 Ga0070698_100025274 3300005471 Bacteria 6188
30 Ga0070698_100073790 3300005471 Bacteria 3417
31 Ga0070698_100110043 3300005471 Bacteria 2721
32 Ga0070699_100001120 3300005518 Bacteria 24946
33 Ga0070699_100006373 3300005518 Bacteria 10288
34 Ga0070699_100013589 3300005518 Bacteria 7009
35 Ga0070699_100015146 3300005518 Bacteria 6624
36 Ga0070699_100033546 3300005518 Bacteria 4435
37 Ga0070699_100058383 3300005518 Bacteria 3343
38 Ga0070699_100092814 3300005518 Bacteria 2641
39 Ga0070679_100012108 3300005530 Bacteria 8239
40 Ga0070697_100002189 3300005536 Bacteria 14997
41 Ga0070697_100008124 3300005536 Bacteria 8187
42 Ga0070672_100112405 3300005543 Bacteria 2222
43 Ga0070695_100017050 3300005545 Bacteria 4406
44 Ga0070695_100081793 3300005545 Bacteria 2137
45 Ga0070696_100000182 3300005546 Bacteria 36507
46 Ga0070696_100015249 3300005546 Bacteria 5159
47 Ga0070696_100074949 3300005546 Bacteria 2387
48 Ga0070696_100097116 3300005546 Bacteria 2106
49 Ga0070704_100000780 3300005549 Bacteria 15734
50 Ga0070704_100008937 3300005549 Bacteria 6035
51 Ga0070704_100010128 3300005549 Bacteria 5732
52 Ga0070704_100012890 3300005549 Bacteria 5172
53 Ga0070704_100013501 3300005549 Bacteria 5069
54 Ga0070704_100060160 3300005549 Bacteria 2713
55 Ga0070664_100007293 3300005564 Bacteria 8914
56 Ga0068852_100065082 3300005616 Bacteria 3180
57 Ga0068864_100025956 3300005618 Bacteria 4937
58 Ga0068864_100067610 3300005618 Bacteria 3103
59 Ga0068863_100035920 3300005841 Bacteria 4719
60 Ga0070716_100010140 3300006173 Bacteria 4716
61 Ga0075428_100032339 3300006844 Bacteria 5777
62 Ga0075428_100036094 3300006844 Bacteria 5447
63 Ga0075428_100221911 3300006844 Bacteria 2041
64 Ga0075428_100263361 3300006844 Bacteria 1856
65 Ga0075433_10001115 3300006852 Bacteria 19412
66 Ga0075433_10042634 3300006852 Bacteria 3938
67 Ga0075433_10052675 3300006852 Bacteria 3547
68 Ga0075433_10077262 3300006852 Bacteria 2933
69 Ga0075433_10096637 3300006852 Bacteria 2614
70 Ga0075433_10098729 3300006852 Bacteria 2585
71 Ga0075434_100018937 3300006871 Bacteria 6653
72 Ga0075434_100022835 3300006871 Bacteria 6090
73 Ga0075434_100043294 3300006871 Bacteria 4465
74 Ga0075434_100288044 3300006871 Bacteria 1662
75 Ga0075429_100001649 3300006880 Bacteria 18438
76 Ga0075429_100005685 3300006880 Bacteria 10752
77 Ga0075436_100013633 3300006914 Bacteria 5568
78 Ga0075436_100044382 3300006914 Bacteria 3065
79 Ga0075436_100056365 3300006914 Bacteria 2714
80 Ga0075436_100093896 3300006914 Bacteria 2086
81 Ga0075435_100009280 3300007076 Bacteria 7111
82 Ga0075435_100040129 3300007076 Bacteria 3737
83 Ga0075435_100116971 3300007076 Bacteria 2221
84 Ga0099794_10000325 3300007265 Bacteria 16359
85 Ga0111539_10062224 3300009094 Bacteria 4419
86 Ga0114129_10003995 3300009147 Bacteria 20836
87 Ga0114129_10005709 3300009147 Bacteria 17630
88 Ga0114129_10175857 3300009147 Bacteria 2916
89 Ga0105248_10023646 3300009177 Bacteria 6828
90 Ga0105237_10001145 3300009545 Bacteria 35656
91 Ga0105237_10088682 3300009545 Bacteria 3082
92 Ga0105239_10031590 3300010375 Bacteria 5822
93 Ga0163162_10014687 3300013306 Bacteria 7654
94 Ga0157376_10268466 3300014969 Bacteria 1601
95 Ga0207653_10001335 3300025885 Bacteria 8017
96 Ga0207653_10004189 3300025885 Bacteria 4530
97 Ga0207682_10031139 3300025893 Bacteria 2140
98 Ga0207692_10131489 3300025898 Bacteria 1414
99 Ga0207699_10020301 3300025906 Bacteria 3558
100 Ga0207684_10009081 3300025910 Bacteria 8803
101 Ga0207684_10018051 3300025910 Bacteria 6047
102 Ga0207707_10008479 3300025912 Bacteria 8913
103 Ga0207707_10033482 3300025912 Bacteria 4497
104 Ga0207707_10199889 3300025912 Bacteria 1743
105 Ga0207707_10250971 3300025912 Bacteria 1537
106 Ga0207671_10037808 3300025914 Bacteria 3578
107 Ga0207693_10057909 3300025915 Bacteria 3036
108 Ga0207663_10000504 3300025916 Bacteria 17086
109 Ga0207660_10001895 3300025917 Bacteria 13930
110 Ga0207646_10053065 3300025922 Bacteria 3627
111 Ga0207646_10056056 3300025922 Bacteria 3523
112 Ga0207646_10088113 3300025922 Bacteria 2777
113 Ga0207646_10096314 3300025922 Bacteria 2651
114 Ga0207646_10099526 3300025922 Bacteria 2605
115 Ga0207646_10299517 3300025922 Bacteria 1453
116 Ga0207681_10129308 3300025923 Bacteria 1865
117 Ga0207644_10062150 3300025931 Bacteria 2707
118 Ga0207665_10000956 3300025939 Bacteria 19568
119 Ga0207691_10130373 3300025940 Bacteria 2222
120 Ga0207691_10203589 3300025940 Bacteria 1722
121 Ga0207711_10069909 3300025941 Bacteria 3044
122 Ga0207651_10102577 3300025960 Bacteria 2127
123 Ga0207712_10046576 3300025961 Bacteria 3007
124 Ga0207703_10347366 3300026035 Bacteria 1365
125 Ga0207678_10088624 3300026067 Bacteria 2644
126 Ga0207641_10107293 3300026088 Bacteria 2470
127 Ga0207648_10036447 3300026089 Bacteria 4333
128 Ga0207648_10054291 3300026089 Bacteria 3500
129 Ga0207676_10231388 3300026095 Bacteria 1652
130 Ga0268265_10045487 3300028380 Bacteria 3276
131 Ga0268265_10178922 3300028380 Bacteria 1821
132 Ga0307410_10002683 3300031852 Bacteria 8683
133 Ga0307410_10011936 3300031852 Bacteria 4995
134 Ga0307409_100021541 3300031995 Bacteria 4422
135 Ga0307409_100030562 3300031995 Bacteria 3872
136 Ga0307409_100079097 3300031995 Bacteria 2648
137 Ga0307409_100206563 3300031995 Bacteria 1762
138 Ga0307416_100157680 3300032002 Bacteria 2092
139 Ga0307414_10114583 3300032004 Bacteria 2060
140 Ga0307414_10221989 3300032004 Bacteria 1552
141 Ga0307411_10002001 3300032005 Bacteria 8743
142 Ga0307411_10160390 3300032005 Bacteria 1683
143 Ga0373931_0025284 3300035691 Bacteria 3016
144 Ga0373931_0027677 3300035691 Bacteria 2896
145 Ga0395905_0136364 3300037471 Bacteria 2309
146 Ga0395905_0244926 3300037471 Bacteria 1675
147 Ga0242420_008824 3300038996 Bacteria 1644
148 Ga0451793_1610344 3300041452 Bacteria 1652
149 Ga0439433_0007753 3300041999 Bacteria 2321
150 Ga0439455_0029358 3300042012 Bacteria 1359
151 Ga0451577_0003717 3300042876 Bacteria 16678
152 Ga0451576_0033708 3300045051 Bacteria 5442
153 Ga0451576_0034258 3300045051 Bacteria 5394
154 Ga0451576_0043932 3300045051 Bacteria 4712
155 Ga0451576_0375657 3300045051 Bacteria 1489
156 Ga0451576_0615320 3300045051 Bacteria 1141
157 Ga0495641_0040243 3300046461 Bacteria 2174
158 Ga0495580_0121858 3300046472 Bacteria 1810
159 Ga0495594_0008461 3300046499 Bacteria 5302
160 Ga0495594_0145909 3300046499 Bacteria 1343
161 Ga0495666_0002543 3300046526 Bacteria 9053
162 Ga0495640_0015393 3300046533 Bacteria 5758
163 Ga0495622_0125206 3300046557 Bacteria 1172
164 Ga0495658_0003690 3300046683 Bacteria 7572
165 Ga0495613_0109348 3300046689 Bacteria 1993
166 Ga0495674_0014557 3300047319 Bacteria 7360
167 Ga0495680_0102271 3300047322 Unclassified 2133
168 Ga0496100_0069403 3300048903 Bacteria 2347
169 Ga0496102_0037572 3300048905 Bacteria 4369
170 Ga0496102_0097205 3300048905 Bacteria 2731
171 Ga0496102_0171174 3300048905 Bacteria 2044
172 Ga0496103_0196008 3300048906 Bacteria 1299
173 Ga0496105_0029989 3300048908 Bacteria 4455
174 Ga0496107_0118933 3300048910 Bacteria 1946
175 Ga0496108_0007180 3300048911 Bacteria 9029
176 Ga0496108_0020701 3300048911 Bacteria 5406
177 Ga0496109_0027331 3300048912 Bacteria 5093
178 Ga0496109_0219007 3300048912 Bacteria 1790
179 Ga0496110_0075278 3300048913 Bacteria 2999
180 Ga0496110_0100813 3300048913 Bacteria 2588
181 Ga0496111_0047609 3300048914 Bacteria 3088
182 Ga0496111_0129561 3300048914 Bacteria 1866
183 Ga0496112_0014355 3300048915 Bacteria 7341
184 Ga0496112_0020944 3300048915 Bacteria 6208
185 Ga0496113_0008250 3300048916 Bacteria 6772
186 Ga0496113_0054476 3300048916 Bacteria 2994
187 Ga0496114_0113205 3300048917 Bacteria 2326
188 Ga0501031_0077870 3300049568 Bacteria 2160
189 Ga0501034_0130882 3300049571 Bacteria 2492
190 Ga0501036_0049213 3300049572 Bacteria 3569
191 Ga0501038_0074155 3300049574 Bacteria 2880
192 Ga0501038_0157703 3300049574 Bacteria 1847
193 Ga0501041_0014629 3300049577 Bacteria 4658
194 Ga0501042_0200987 3300049578 Bacteria 1437
195 Ga0501046_0068457 3300049580 Bacteria 2763
196 Ga0501048_0022501 3300049582 Bacteria 4609
197 Ga0501048_0072445 3300049582 Bacteria 2432
198 Ga0501067_0000617 3300049583 Bacteria 19156
199 Ga0501067_0002720 3300049583 Bacteria 9730
200 Ga0501067_0008582 3300049583 Bacteria 5665
201 Ga0501067_0053231 3300049583 Bacteria 2243
202 Ga0501068_0000743 3300049584 Bacteria 16699
203 Ga0501068_0046349 3300049584 Bacteria 2621
204 Ga0501069_0001548 3300049585 Bacteria 11367
205 Ga0501069_0007134 3300049585 Bacteria 5857
206 Ga0501070_0005768 3300049586 Bacteria 10559
207 Ga0501070_0032418 3300049586 Bacteria 4373
208 Ga0501070_0063158 3300049586 Bacteria 3067
209 Ga0501071_0004298 3300049587 Bacteria 9029
210 Ga0501071_0162185 3300049587 Bacteria 1671
211 Ga0501072_0012785 3300049588 Bacteria 6417
212 Ga0501072_0015099 3300049588 Bacteria 5923
213 Ga0501073_0003102 3300049589 Bacteria 12452
214 Ga0501074_0001834 3300049590 Bacteria 14559
215 Ga0501074_0002535 3300049590 Bacteria 12747
216 Ga0501074_0047316 3300049590 Bacteria 3110
217 Ga0501075_0009694 3300049591 Bacteria 6747
218 Ga0501076_0002011 3300049592 Bacteria 13906
219 Ga0501077_0004348 3300049593 Bacteria 8592
220 Ga0501077_0015902 3300049593 Bacteria 4740
221 Ga0501079_0029421 3300049741 Bacteria 4217
222 Ga0501079_0061233 3300049741 Bacteria 2903
223 Ga0501079_0063653 3300049741 Bacteria 2845
224 Ga0501079_0267199 3300049741 Bacteria 1337
225 Ga0501080_0119130 3300049742 Bacteria 2447
226 Ga0501081_0049375 3300049743 Bacteria 2898
227 Ga0501081_0118552 3300049743 Bacteria 1883
228 Ga0501083_0003181 3300049744 Bacteria 11432
229 Ga0501083_0014550 3300049744 Bacteria 5501
230 Ga0501044_0021934 3300049823 Bacteria 6809
231 Ga0501045_0046599 3300049824 Bacteria 3157
232 nmdc:mga05p37_172402_c1 3300050507 Bacteria 2638
233 nmdc:mga05p37_33506_c1 3300050507 Bacteria 6292
234 nmdc:mga05p37_3557_c1 3300050507 Bacteria 18199
235 nmdc:mga05p37_53118_c1 3300050507 Bacteria 4983
236 nmdc:mga05p37_59221_c1 3300050507 Bacteria 4716
237 nmdc:mga09592_127274_c1 3300050508 Bacteria 2190
238 nmdc:mga09592_14268_c1 3300050508 Bacteria 6486
239 nmdc:mga09592_151709_c1 3300050508 Bacteria 1999
240 nmdc:mga09592_5339_c1 3300050508 Bacteria 10443
241 nmdc:mga08y16_37073_c1 3300050511 Bacteria 5119
242 nmdc:mga0n895_1412_c1 3300050512 Bacteria 17932
243 nmdc:mga0n895_1507_c1 3300050512 Bacteria 8832
244 nmdc:mga0n895_244777_c1 3300050512 Bacteria 1820
245 nmdc:mga0n895_35689_c1 3300050512 Bacteria 4796
246 nmdc:mga0n895_36837_c1 3300050512 Bacteria 4727
247 nmdc:mga0n895_39512_c1 3300050512 Bacteria 4578
248 nmdc:mga0n895_461211_c1 3300050512 Bacteria 1282
249 nmdc:mga0rr50_13964_c1 3300050513 Bacteria 5248
250 nmdc:mga0rr50_325838_c1 3300050513 Bacteria 1289
251 nmdc:mga0rr50_326209_c1 3300050513 Bacteria 1288
252 nmdc:mga0rr50_37424_c1 3300050513 Bacteria 3502
253 nmdc:mga0rr50_402619_c1 3300050513 Bacteria 1156
254 nmdc:mga0rr50_45954_c1 3300050513 Bacteria 3213
255 nmdc:mga08x19_2429_c1 3300050514 Bacteria 11309
256 nmdc:mga08x19_48655_c1 3300050514 Bacteria 2717
257 nmdc:mga08x19_7109_c1 3300050514 Bacteria 6646
258 nmdc:mga0a205_14732_c1 3300050515 Bacteria 7295
259 nmdc:mga0a205_22566_c1 3300050515 Bacteria 5964
260 nmdc:mga0a205_285443_c1 3300050515 Bacteria 1525
261 nmdc:mga0a205_415_c1 3300050515 Bacteria 32778
262 nmdc:mga0a205_62085_c1 3300050515 Bacteria 3610
263 nmdc:mga0a205_69773_c1 3300050515 Bacteria 3393
264 nmdc:mga0a205_8781_c1 3300050515 Bacteria 9207
265 Ga0501084_0003852 3300054114 Bacteria 12213
266 Ga0501084_0014224 3300054114 Bacteria 6589
267 Ga0501084_0016223 3300054114 Bacteria 6184
268 Ga0501084_0226477 3300054114 Bacteria 1578
269 Ga0590071_002257 3300059421 Bacteria 4885
270 Ga0590071_002300 3300059421 Bacteria 4836
271 Ga0590071_004481 3300059421 Bacteria 3389
272 Ga0590075_005319 3300059424 Bacteria 3041
273 Ga0501082_0055369 3300060353 Bacteria 3417
274 Ga0501082_0064200 3300060353 Bacteria 3162
275 Ga0530510_0149151 3300061734 Bacteria 1726
276 2688067281 2687453257 Bacteria 6784659
277 2889420963 2889415604 Bacteria 8048700
278 Ga0501040_0020873
279 Ga0070680_100006166
280 Ga0070680_100017388
281 Ga0070680_100032291
282 Ga0070680_100064197
283 Ga0070692_10023491
284 Ga0070668_100024558
285 Ga0070675_100096507
286 Ga0070671_100011392
287 Ga0070711_100000072
288 Ga0070711_100000870
289 Ga0070705_100003237
290 Ga0070705_100007536
291 Ga0070694_100000741
292 Ga0070694_100004704
293 Ga0070694_100035166
294 Ga0070694_100044722
295 Ga0070694_100111395
296 Ga0070708_100003009
297 Ga0070708_100039071
298 Ga0070681_10013384
299 Ga0070681_10046319
300 Ga0068867_100039508
301 Ga0070706_100046612
302 Ga0070707_100002698
303 Ga0070707_100015993
304 Ga0070707_100135283
305 Ga0070707_100195934
306 Ga0070698_100025274
307 Ga0070698_100073790
308 Ga0070698_100110043
309 Ga0070699_100001120
310 Ga0070699_100006373
311 Ga0070699_100013589
312 Ga0070699_100015146
313 Ga0070699_100033546
314 Ga0070699_100058383
315 Ga0070699_100092814
316 Ga0070679_100012108
317 Ga0070697_100002189
318 Ga0070697_100008124
319 Ga0070672_100112405
320 Ga0070695_100017050
321 Ga0070695_100081793
322 Ga0070696_100000182
323 Ga0070696_100015249
324 Ga0070696_100074949
325 Ga0070696_100097116
326 Ga0070704_100000780
327 Ga0070704_100008937
328 Ga0070704_100010128
329 Ga0070704_100012890
330 Ga0070704_100013501
331 Ga0070704_100060160
332 Ga0070664_100007293
333 Ga0068852_100065082
334 Ga0068864_100025956
335 Ga0068864_100067610
336 Ga0068863_100035920
337 Ga0070716_100010140
338 Ga0075428_100032339
339 Ga0075428_100036094
340 Ga0075428_100221911
341 Ga0075428_100263361
342 Ga0075433_10001115
343 Ga0075433_10042634
344 Ga0075433_10052675
345 Ga0075433_10077262
346 Ga0075433_10096637
347 Ga0075433_10098729
348 Ga0075434_100018937
349 Ga0075434_100022835
350 Ga0075434_100043294
351 Ga0075434_100288044
352 Ga0075429_100001649
353 Ga0075429_100005685
354 Ga0075436_100013633
355 Ga0075436_100044382
356 Ga0075436_100056365
357 Ga0075436_100093896
358 Ga0075435_100009280
359 Ga0075435_100040129
360 Ga0075435_100116971
361 Ga0099794_10000325
362 Ga0111539_10062224
363 Ga0114129_10003995
364 Ga0114129_10005709
365 Ga0114129_10175857
366 Ga0105248_10023646
367 Ga0105237_10001145
368 Ga0105237_10088682
369 Ga0105239_10031590
370 Ga0163162_10014687
371 Ga0157376_10268466
372 Ga0207653_10001335
373 Ga0207653_10004189
374 Ga0207682_10031139
375 Ga0207692_10131489
376 Ga0207699_10020301
377 Ga0207684_10009081
378 Ga0207684_10018051
379 Ga0207707_10008479
380 Ga0207707_10033482
381 Ga0207707_10199889
382 Ga0207707_10250971
383 Ga0207671_10037808
384 Ga0207693_10057909
385 Ga0207663_10000504
386 Ga0207660_10001895
387 Ga0207646_10053065
388 Ga0207646_10056056
389 Ga0207646_10088113
390 Ga0207646_10096314
391 Ga0207646_10099526
392 Ga0207646_10299517
393 Ga0207681_10129308
394 Ga0207644_10062150
395 Ga0207665_10000956
396 Ga0207691_10130373
397 Ga0207691_10203589
398 Ga0207711_10069909
399 Ga0207651_10102577
400 Ga0207712_10046576
401 Ga0207703_10347366
402 Ga0207678_10088624
403 Ga0207641_10107293
404 Ga0207648_10036447
405 Ga0207648_10054291
406 Ga0207676_10231388
407 Ga0268265_10045487
408 Ga0268265_10178922
409 Ga0307410_10002683
410 Ga0307410_10011936
411 Ga0307409_100021541
412 Ga0307409_100030562
413 Ga0307409_100079097
414 Ga0307409_100206563
415 Ga0307416_100157680
416 Ga0307414_10114583
417 Ga0307414_10221989
418 Ga0307411_10002001
419 Ga0307411_10160390
420 Ga0373931_0025284
421 Ga0373931_0027677
422 Ga0395905_0136364
423 Ga0395905_0244926
424 Ga0242420_008824
425 Ga0451793_1610344
426 Ga0439433_0007753
427 Ga0439455_0029358
428 Ga0451577_0003717
429 Ga0451576_0033708
430 Ga0451576_0034258
431 Ga0451576_0043932
432 Ga0451576_0375657
433 Ga0451576_0615320
434 Ga0495641_0040243
435 Ga0495580_0121858
436 Ga0495594_0008461
437 Ga0495594_0145909
438 Ga0495666_0002543
439 Ga0495640_0015393
440 Ga0495622_0125206
441 Ga0495658_0003690
442 Ga0495613_0109348
443 Ga0495674_0014557
444 Ga0495680_0102271
445 Ga0496100_0069403
446 Ga0496102_0037572
447 Ga0496102_0097205
448 Ga0496102_0171174
449 Ga0496103_0196008
450 Ga0496105_0029989
451 Ga0496107_0118933
452 Ga0496108_0007180
453 Ga0496108_0020701
454 Ga0496109_0027331
455 Ga0496109_0219007
456 Ga0496110_0075278
457 Ga0496110_0100813
458 Ga0496111_0047609
459 Ga0496111_0129561
460 Ga0496112_0014355
461 Ga0496112_0020944
462 Ga0496113_0008250
463 Ga0496113_0054476
464 Ga0496114_0113205
465 Ga0501031_0077870
466 Ga0501034_0130882
467 Ga0501036_0049213
468 Ga0501038_0074155
469 Ga0501038_0157703
470 Ga0501041_0014629
471 Ga0501042_0200987
472 Ga0501046_0068457
473 Ga0501048_0022501
474 Ga0501048_0072445
475 Ga0501067_0000617
476 Ga0501067_0002720
477 Ga0501067_0008582
478 Ga0501067_0053231
479 Ga0501068_0000743
480 Ga0501068_0046349
481 Ga0501069_0001548
482 Ga0501069_0007134
483 Ga0501070_0005768
484 Ga0501070_0032418
485 Ga0501070_0063158
486 Ga0501071_0004298
487 Ga0501071_0162185
488 Ga0501072_0012785
489 Ga0501072_0015099
490 Ga0501073_0003102
491 Ga0501074_0001834
492 Ga0501074_0002535
493 Ga0501074_0047316
494 Ga0501075_0009694
495 Ga0501076_0002011
496 Ga0501077_0004348
497 Ga0501077_0015902
498 Ga0501079_0029421
499 Ga0501079_0061233
500 Ga0501079_0063653
501 Ga0501079_0267199
502 Ga0501080_0119130
503 Ga0501081_0049375
504 Ga0501081_0118552
505 Ga0501083_0003181
506 Ga0501083_0014550
507 Ga0501044_0021934
508 Ga0501045_0046599
509 nmdc:mga05p37_172402_c1
510 nmdc:mga05p37_33506_c1
511 nmdc:mga05p37_3557_c1
512 nmdc:mga05p37_53118_c1
513 nmdc:mga05p37_59221_c1
514 nmdc:mga09592_127274_c1
515 nmdc:mga09592_14268_c1
516 nmdc:mga09592_151709_c1
517 nmdc:mga09592_5339_c1
518 nmdc:mga08y16_37073_c1
519 nmdc:mga0n895_1412_c1
520 nmdc:mga0n895_1507_c1
521 nmdc:mga0n895_244777_c1
522 nmdc:mga0n895_35689_c1
523 nmdc:mga0n895_36837_c1
524 nmdc:mga0n895_39512_c1
525 nmdc:mga0n895_461211_c1
526 nmdc:mga0rr50_13964_c1
527 nmdc:mga0rr50_325838_c1
528 nmdc:mga0rr50_326209_c1
529 nmdc:mga0rr50_37424_c1
530 nmdc:mga0rr50_402619_c1
531 nmdc:mga0rr50_45954_c1
532 nmdc:mga08x19_2429_c1
533 nmdc:mga08x19_48655_c1
534 nmdc:mga08x19_7109_c1
535 nmdc:mga0a205_14732_c1
536 nmdc:mga0a205_22566_c1
537 nmdc:mga0a205_285443_c1
538 nmdc:mga0a205_415_c1
539 nmdc:mga0a205_62085_c1
540 nmdc:mga0a205_69773_c1
541 nmdc:mga0a205_8781_c1
542 Ga0501084_0003852
543 Ga0501084_0014224
544 Ga0501084_0016223
545 Ga0501084_0226477
546 Ga0590071_002257
547 Ga0590071_002300
548 Ga0590071_004481
549 Ga0590075_005319
550 Ga0501082_0055369
551 Ga0501082_0064200
552 Ga0530510_0149151
553 2688067281
554 2889420963

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01264

Chorismate_synt

Chorismate synthase

26

396

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qxo-assembly1.cif.gz_C crystal structure of chorismate synthase complexed with oxidized fmn and epsp 0.9504 4 383
4ecd-assembly1.cif.gz_B-2 2.5 angstrom resolution crystal structure of bifidobacterium longum chorismate synthase 0.949 2 386
4ecd-assembly1.cif.gz_A-2 2.5 angstrom resolution crystal structure of bifidobacterium longum chorismate synthase 0.9423 1 386
4ecd-assembly1.cif.gz_B-2 2.5 angstrom resolution crystal structure of bifidobacterium longum chorismate synthase 0.9422 2 386
2qhf-assembly1.cif.gz_A mycobacterium tuberculosis chorismate synthase in complex with nca 0.9372 2 388
ID Description Score Start End Superfamily
4ecdB00 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.949 2 386 3.60.150.10
4ecdB00 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9422 2 386 3.60.150.10
af_Q2FYG9_1_387_3.60.150.10 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9381 4 382 3.60.150.10
4bajA00 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9276 4 388 3.60.150.10
5z9aA00 Alpha Beta;4-Layer Sandwich;Chorismate synthase, AroC fold;Chorismate synthase AroC 0.9269 1 370 3.60.150.10
ID Description Score Start End GO Terms
AF-A0A257TJA6-F1-model_v4 Chorismate synthase (EC 4.2.3.5) 0.9828 187 380 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181
AF-A0A3D4IG10-F1-model_v4 chorismate synthase (EC 4.2.3.5) 0.9826 187 387 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181
AF-A0A7C2ILN6-F1-model_v4 deleted 0.9803 200 385
AF-A0A0F8XY23-F1-model_v4 chorismate synthase (EC 4.2.3.5) 0.9799 207 371 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181
AF-A0A6L7NKY9-F1-model_v4 chorismate synthase (EC 4.2.3.5) 0.9799 218 384 GO:0004107
GO:0005829
GO:0008652
GO:0009073
GO:0009423
GO:0010181

Map