F382017

General Info

Members Datasets Scaffolds Average Seq Length
277 227 223 485

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0093017|Ga0496121_0093017_559_2277
Length 572
Sequence LGFGGEKSTMRQTTDVDLALAPRPDGMPLQRWLHGELRAAIVSGRLAPGVRLPATRELASRFGLSRGTVLGVFAQLTAEGYIEGAVGRGSFVAAELPDSRLEAPQPVALDKGGSGGAREGERPAGPDRAAAVREVERATGLGAEPAADRGAAQELVSYAFSPSGNGANGATQPDASAGLSARGKLLARSAFALDGRPLPAQAFRAGQPDLDAFPFALWARIAARRTRLLHRSMLADGDACGYWPLREAIAAHVRMARGIACSAGQVVIVASVQQVLDLGARLLLDPGDSVWLEDPGYPGARLVFEAAGARIVGVPVDDDGMDVAAGMAREPSAKLAYVTAGRHAPLGPPLAHERRLALLGWARSHGAFVIEDDYDSEYRFEGRPLAALKSLDDSGRVIYCGTFSKLLFPALRIAYAVLPERLVEPFSAALSLTSRHVPLDSQATLHEFIAEGHFGRHARRMRLLYGERAAALRDAAARHLAGVLEVPPIVAGLDAPAWLPPGTDDARVATRAALAGIETRPLSAYAVQRAAPAGLVLGFACVEVAQIEAGARGLAEVLGSMWDGSEWATKTR

Samples

Sample ID Description Type Environment
1 2510065053 Pseudomonas sp. MOIL14HWK12:I1 Isolate Rhizosphere
2 2510065055 Pseudomonas sp. MOIL14HWK12:I2 Isolate Rhizosphere
3 2510065058 Pseudomonas oleovorans MOIL14HWK12 Isolate Rhizosphere
4 2511231015 Pseudomonas sp. GM49 Isolate Nodule
5 2513237166 Paraburkholderia azotifigens UYPR1.413 Isolate Nodule
6 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
7 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
8 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
9 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
10 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
11 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
12 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
13 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
14 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
15 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
16 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
17 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
18 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
19 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
20 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
21 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
22 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
23 2773857672 Pseudomonas sp. 1766 Isolate Unclassified
24 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
25 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
26 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
27 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
28 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
29 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
30 2900634093 Paraburkholderia dipogonis ICMP 19430 Isolate Unclassified
31 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
32 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
33 2917832318 Pseudomonas rhizoryzae RY24 Isolate Unclassified
34 2919125081 Pseudomonas psychrotolerans 1545 Isolate Rhizosphere
35 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
36 2974298342 Pseudomonas sp. SORGH_AS 211 Isolate Unclassified
37 2984499530 Pseudomonas sp. SORGH_AS199 Isolate Aerial Root
38 2984504281 Pseudomonas psychrotolerans SORGH_AS201 Isolate Aerial Root
39 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
40 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
41 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
42 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
43 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
44 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
45 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
46 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
47 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
48 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
49 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
50 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
51 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
52 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
53 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
54 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
55 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
56 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
57 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
58 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
59 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
60 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
61 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
62 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
63 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
64 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
65 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
66 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
67 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
68 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
69 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
70 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
71 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
72 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
73 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
74 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
75 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
77 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
78 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
79 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
80 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
81 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
82 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
83 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
84 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
85 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
86 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
87 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
88 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
89 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
90 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
91 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
92 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
93 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
94 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
95 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
96 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
97 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
98 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
99 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
100 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
101 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
102 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
103 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
104 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
105 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
107 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
108 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
110 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
111 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
133 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
134 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
135 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
136 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
137 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
138 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
141 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
142 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
143 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
144 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
145 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
146 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
147 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
148 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
149 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
150 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
151 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
152 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
153 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
154 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
155 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
156 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
157 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
158 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
159 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
160 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
161 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
162 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
163 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
164 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
165 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
166 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
167 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
168 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
169 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
170 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
171 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
172 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
173 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
174 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
175 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
176 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
177 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
178 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
179 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
180 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
181 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
182 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
183 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
184 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
185 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
186 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
187 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
188 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
189 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
190 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
191 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
192 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
193 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
194 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
195 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
196 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
197 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
198 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
199 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
200 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
201 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
202 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
203 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
206 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
207 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
208 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
209 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
210 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
211 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
212 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
213 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
214 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
215 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
216 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
217 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
218 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
219 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
220 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
221 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
222 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
223 642555112 Paraburkholderia phymatum STM815 Isolate Nodule
224 642555113 Paraburkholderia phytofirmans PsJN Isolate Unclassified
225 8016728285 Pseudomonas psychrotolerans SORGH_AS 227 Isolate Unclassified
226 8019769354 Pseudomonas sp. MSSRFD41 Isolate Rhizosphere
227 8057798959 Pseudomonas piscis BW16M1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.51
Metatranscriptomes 0
Isolates 19.49

Biome Distribution

Category Percentage (%)
Aerial Root 1.44
Bulb 0
Endosphere 6.14
Nodule 3.25
Rhizoplane 10.47
Rhizosphere 64.62
Stem 0
Stem Tuber 0
Unclassified 14.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25162J39368_1000050 3300002737 Bacteria 157157
2 JGI25163J39215_1000384 3300002771 Bacteria 14129
3 JGI25164J39214_1000025 3300002772 Bacteria 157157
4 JGI25165J46597_1000176 3300003214 Bacteria 99160
5 rootL2_10011935 3300003322 Bacteria 9880
6 JGI25160J50197_1000036 3300003354 Bacteria 166820
7 Ga0055535_1000322 3300003761 Bacteria 48378
8 Ga0055529_1000397 3300003763 Bacteria 46314
9 Ga0055524_1000003 3300003775 Bacteria 399748
10 Ga0065165_1000533 3300005262 Bacteria 57970
11 Ga0070683_100002858 3300005329 Bacteria 13830
12 Ga0070666_10013323 3300005335 Bacteria 5214
13 Ga0070680_100073945 3300005336 Bacteria 2803
14 Ga0070682_100036306 3300005337 Bacteria 3012
15 Ga0070660_100044581 3300005339 Bacteria 3393
16 Ga0070668_100021287 3300005347 Bacteria 4902
17 Ga0070669_100166125 3300005353 Bacteria 1718
18 Ga0070667_100074269 3300005367 Bacteria 2900
19 Ga0070708_100002957 3300005445 Bacteria 13208
20 Ga0070662_100008948 3300005457 Bacteria 6527
21 Ga0070706_100000296 3300005467 Bacteria 60457
22 Ga0070697_100000323 3300005536 Bacteria 37824
23 Ga0070665_100080354 3300005548 Bacteria 3265
24 Ga0068855_100002110 3300005563 Bacteria 24594
25 Ga0070664_100011038 3300005564 Bacteria 7325
26 Ga0068854_100022988 3300005578 Bacteria 4254
27 Ga0068856_100165402 3300005614 Bacteria 2223
28 Ga0068861_100043660 3300005719 Bacteria 3367
29 Ga0068851_10023096 3300005834 Bacteria 3036
30 Ga0068863_100136666 3300005841 Bacteria 2342
31 Ga0068860_100063833 3300005843 Bacteria 3497
32 Ga0081538_10022845 3300005981 Bacteria 4516
33 Ga0070717_10234518 3300006028 Unclassified 1616
34 Ga0075363_100035842 3300006048 Bacteria 2599
35 Ga0070716_100006044 3300006173 Bacteria 5899
36 Ga0070712_100000294 3300006175 Bacteria 28077
37 Ga0097621_100089805 3300006237 Bacteria 2569
38 Ga0068871_100023442 3300006358 Bacteria 4775
39 Ga0075428_100078662 3300006844 Bacteria 3600
40 Ga0075434_100009230 3300006871 Bacteria 9191
41 Ga0099826_10000002 3300006948 Bacteria 1125830
42 Ga0099826_10098202 3300006948 Bacteria 1773
43 Ga0105251_10001703 3300009011 Bacteria 18420
44 Ga0105251_10001857 3300009011 Bacteria 17362
45 Ga0105244_10073457 3300009036 Bacteria 1702
46 Ga0105250_10000833 3300009092 Bacteria 18333
47 Ga0105240_10004838 3300009093 Bacteria 20291
48 Ga0105240_10114526 3300009093 Bacteria 3257
49 Ga0111539_10000802 3300009094 Bacteria 40941
50 Ga0111539_10090748 3300009094 Bacteria 3590
51 Ga0105245_10143029 3300009098 Bacteria 2255
52 Ga0105247_10051979 3300009101 Bacteria 2525
53 Ga0114129_10020387 3300009147 Bacteria 9430
54 Ga0105243_10000899 3300009148 Bacteria 27949
55 Ga0105243_10155329 3300009148 Bacteria 1967
56 Ga0105241_10033772 3300009174 Bacteria 3841
57 Ga0105242_10169910 3300009176 Bacteria 1915
58 Ga0105248_10101935 3300009177 Bacteria 3235
59 Ga0105237_10197536 3300009545 Bacteria 2011
60 Ga0157371_10000484 3300013102 Bacteria 48468
61 Ga0157371_10002539 3300013102 Bacteria 17337
62 Ga0157369_10005033 3300013105 Bacteria 15472
63 Ga0157369_10009853 3300013105 Bacteria 10918
64 Ga0157369_10037339 3300013105 Bacteria 5318
65 Ga0157374_10019013 3300013296 Bacteria 6076
66 Ga0157374_10023561 3300013296 Bacteria 5509
67 Ga0163162_10049336 3300013306 Bacteria 4218
68 Ga0163162_10170182 3300013306 Bacteria 2303
69 Ga0157372_10066925 3300013307 Bacteria 4036
70 Ga0157372_10069526 3300013307 Bacteria 3960
71 Ga0157372_10072117 3300013307 Bacteria 3891
72 Ga0163163_10040586 3300014325 Bacteria 4545
73 Ga0182008_10015391 3300014497 Bacteria 3991
74 Ga0157379_10001668 3300014968 Bacteria 18355
75 Ga0157379_10033535 3300014968 Bacteria 4578
76 Ga0183361_10021 3300016635 Bacteria 114065
77 Ga0213872_10000007 3300021361 Bacteria 228206
78 Ga0213872_10021523 3300021361 Bacteria 2969
79 Ga0209760_100033 3300025207 Bacteria 136583
80 Ga0209437_100002 3300025233 Bacteria 1574801
81 Ga0209258_100025 3300025242 Bacteria 534777
82 Ga0209759_1000028 3300025256 Bacteria 298755
83 Ga0209759_1000693 3300025256 Bacteria 30223
84 Ga0209233_1000004 3300025261 Bacteria 1574798
85 Ga0209455_1000112 3300025272 Bacteria 186237
86 Ga0209256_1000007 3300025299 Bacteria 1136599
87 Ga0207426_1000014 3300025302 Bacteria 649413
88 Ga0207696_1000910 3300025711 Bacteria 18339
89 Ga0207713_1001502 3300025735 Bacteria 18428
90 Ga0207713_1024028 3300025735 Bacteria 2851
91 Ga0207699_10030020 3300025906 Bacteria 3038
92 Ga0207684_10006462 3300025910 Bacteria 10689
93 Ga0207707_10007054 3300025912 Bacteria 9793
94 Ga0207695_10000242 3300025913 Bacteria 142011
95 Ga0207693_10000785 3300025915 Bacteria 28435
96 Ga0207663_10003917 3300025916 Bacteria 7361
97 Ga0207657_10004616 3300025919 Bacteria 14554
98 Ga0207652_10009055 3300025921 Bacteria 8018
99 Ga0207687_10039305 3300025927 Bacteria 3239
100 Ga0207706_10004921 3300025933 Bacteria 12491
101 Ga0207709_10001036 3300025935 Bacteria 20530
102 Ga0207711_10003212 3300025941 Bacteria 14235
103 Ga0207661_10000561 3300025944 Bacteria 23743
104 Ga0207667_10001688 3300025949 Bacteria 27790
105 Ga0207658_10110066 3300025986 Bacteria 2176
106 Ga0207641_10029904 3300026088 Bacteria 4507
107 Ga0207674_10056122 3300026116 Bacteria 4001
108 Ga0207675_100065996 3300026118 Bacteria 3382
109 Ga0207683_10151441 3300026121 Bacteria 2093
110 Ga0209282_1000001 3300027666 Bacteria 2450367
111 Ga0207428_10000948 3300027907 Bacteria 32273
112 Ga0265327_10000457 3300031251 Bacteria 73150
113 Ga0265316_10072913 3300031344 Bacteria 2645
114 Ga0307412_10021696 3300031911 Bacteria 3927
115 Ga0307412_10032615 3300031911 Bacteria 3303
116 Ga0373931_0016554 3300035691 Bacteria 3631
117 Ga0373927_0074725 3300035695 Bacteria 2194
118 Ga0373927_0117991 3300035695 Bacteria 1731
119 Ga0395898_0004404 3300037466 Bacteria 15404
120 Ga0395905_0000009 3300037471 Bacteria 488729
121 Ga0395905_0029978 3300037471 Bacteria 5128
122 Ga0400490_60616 3300038726 Bacteria 1690
123 Ga0400485_18728 3300038735 Bacteria 6937
124 Ga0400488_47385 3300038741 Bacteria 5726
125 Ga0400486_04403 3300038742 Bacteria 12961
126 Ga0400483_290837 3300039062 Bacteria 13656
127 Ga0400489_60328 3300039093 Bacteria 8811
128 Ga0400489_69096 3300039093 Bacteria 4195
129 Ga0436361_0163583 3300039447 Bacteria 173204
130 Ga0495590_0026649 3300046457 Bacteria 2028
131 Ga0495629_0000048 3300046459 Bacteria 109659
132 Ga0495638_0003175 3300046460 Bacteria 12992
133 Ga0495641_0025409 3300046461 Bacteria 2908
134 Ga0495651_0039407 3300046462 Bacteria 3679
135 Ga0495653_0000586 3300046463 Bacteria 28020
136 Ga0495580_0003320 3300046472 Bacteria 13762
137 Ga0495580_0004366 3300046472 Bacteria 11873
138 Ga0495580_0007545 3300046472 Bacteria 8730
139 Ga0495582_0005770 3300046473 Bacteria 6896
140 Ga0495605_0005090 3300046474 Bacteria 7668
141 Ga0495605_0015123 3300046474 Bacteria 4207
142 Ga0495664_0073593 3300046477 Bacteria 2043
143 Ga0495607_0002888 3300046501 Bacteria 13568
144 Ga0495583_0001755 3300046506 Bacteria 20693
145 Ga0495583_0020506 3300046506 Bacteria 3422
146 Ga0495620_0000007 3300046515 Bacteria 191058
147 Ga0495620_0028545 3300046515 Bacteria 2593
148 Ga0495630_0000996 3300046517 Bacteria 19710
149 Ga0495632_0001529 3300046519 Bacteria 19096
150 Ga0495643_0000789 3300046522 Bacteria 35159
151 Ga0495643_0023957 3300046522 Bacteria 3465
152 Ga0495665_0023346 3300046531 Bacteria 3321
153 Ga0495609_0003133 3300046538 Bacteria 9652
154 Ga0495633_0027304 3300046558 Bacteria 2791
155 Ga0495661_0057481 3300046665 Bacteria 2322
156 Ga0495599_0010641 3300046678 Bacteria 5630
157 Ga0495623_0001035 3300046679 Bacteria 18786
158 Ga0495646_0001843 3300046680 Bacteria 12729
159 Ga0495613_0028101 3300046689 Bacteria 4185
160 Ga0495589_0026479 3300046794 Bacteria 2938
161 Ga0495604_0001868 3300047317 Bacteria 17132
162 Ga0495674_0027815 3300047319 Bacteria 5163
163 Ga0495674_0062886 3300047319 Bacteria 3230
164 Ga0495672_0004236 3300047320 Bacteria 11850
165 Ga0495680_0033785 3300047322 Bacteria 4138
166 Ga0495687_051424 3300047443 Bacteria 1748
167 Ga0495679_000254 3300047446 Bacteria 44204
168 Ga0495686_0023380 3300047472 Bacteria 4077
169 Ga0495593_0001185 3300047673 Bacteria 15231
170 Ga0495602_0007926 3300048088 Bacteria 11100
171 Ga0495602_0044073 3300048088 Bacteria 4050
172 Ga0495626_0003577 3300048091 Bacteria 9909
173 Ga0495626_0022570 3300048091 Bacteria 3106
174 Ga0496100_0000124 3300048903 Bacteria 43738
175 Ga0496101_0000147 3300048904 Bacteria 60811
176 Ga0496102_0000057 3300048905 Bacteria 171634
177 Ga0496102_0010411 3300048905 Bacteria 8002
178 Ga0496103_0000142 3300048906 Bacteria 75004
179 Ga0496103_0005654 3300048906 Bacteria 7472
180 Ga0496104_0048089 3300048907 Bacteria 4021
181 Ga0496104_0081236 3300048907 Bacteria 3091
182 Ga0496104_0090257 3300048907 Bacteria 2928
183 Ga0496106_0060905 3300048909 Bacteria 2862
184 Ga0496107_0080843 3300048910 Unclassified 2370
185 Ga0496109_0029141 3300048912 Bacteria 4942
186 Ga0496112_0012830 3300048915 Bacteria 7711
187 Ga0496112_0074326 3300048915 Bacteria 3360
188 Ga0496117_0000118 3300048920 Bacteria 173803
189 Ga0496117_0001667 3300048920 Bacteria 31036
190 Ga0496117_0002775 3300048920 Bacteria 21453
191 Ga0496118_0000068 3300048921 Bacteria 204242
192 Ga0496118_0001578 3300048921 Bacteria 33807
193 Ga0496119_0016893 3300048922 Bacteria 5522
194 Ga0496121_0000725 3300048924 Bacteria 60959
195 Ga0496121_0002363 3300048924 Bacteria 29039
196 Ga0496121_0012695 3300048924 Bacteria 9141
197 Ga0496121_0093017 3300048924 Bacteria 2349
198 Ga0496122_0006992 3300048925 Bacteria 12704
199 Ga0496123_0001223 3300048926 Bacteria 37435
200 Ga0496124_0012887 3300048927 Bacteria 8208
201 Ga0496125_0000506 3300048928 Bacteria 67688
202 Ga0496126_0007790 3300048929 Bacteria 11677
203 Ga0495678_024729 3300049459 Bacteria 2589
204 Ga0495682_0004841 3300049460 Bacteria 5682
205 Ga0501031_0122058 3300049568 Bacteria 1702
206 Ga0501032_0001746 3300049569 Bacteria 17173
207 Ga0501034_0034205 3300049571 Bacteria 5152
208 Ga0501036_0001349 3300049572 Bacteria 18824
209 Ga0501037_0034234 3300049573 Bacteria 3748
210 Ga0501038_0011582 3300049574 Bacteria 8046
211 Ga0501039_0000978 3300049575 Bacteria 20752
212 Ga0501046_0003140 3300049580 Bacteria 15255
213 Ga0501069_0000472 3300049585 Bacteria 18339
214 Ga0501070_0004700 3300049586 Bacteria 11698
215 Ga0501073_0002768 3300049589 Bacteria 13131
216 Ga0501074_0070780 3300049590 Bacteria 2507
217 Ga0501076_0238693 3300049592 Bacteria 1487
218 Ga0501080_0000935 3300049742 Bacteria 23863
219 Ga0501083_0002415 3300049744 Bacteria 12767
220 Ga0501035_0003278 3300049822 Bacteria 15517
221 nmdc:mga05p37_4038_c1 3300050507 Bacteria 17149
222 nmdc:mga08y16_362_c1 3300050511 Bacteria 40893
223 Ga0501084_0066039 3300054114 Bacteria 3027

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049592 Ga0501076_0238693 Ga0501076_0238693_209_1456 371
2 3300049822 Ga0501035_0003278 Ga0501035_0003278_14236_15483 371
3 3300026121 Ga0207683_10151441 Ga0207683_101514412 379
4 3300049574 Ga0501038_0011582 Ga0501038_0011582_6720_8033 393
5 3300009011 Ga0105251_10001857 Ga0105251_100018573 405
6 3300013105 Ga0157369_10005033 Ga0157369_100050339 405
7 3300013307 Ga0157372_10072117 Ga0157372_100721173 405
8 3300025735 Ga0207713_1024028 Ga0207713_10240282 405
9 3300049590 Ga0501074_0070780 Ga0501074_0070780_14_1399 417
10 3300006844 Ga0075428_100078662 Ga0075428_1000786623 428
11 3300006871 Ga0075434_100009230 Ga0075434_1000092309 428
12 3300009147 Ga0114129_10020387 Ga0114129_1002038710 428
13 3300050507 nmdc:mga05p37_4038_c1 nmdc:mga05p37_4038_c1_6315_7751 428
14 3300003761 Ga0055535_1000322 Ga0055535_100032226 432
15 3300003763 Ga0055529_1000397 Ga0055529_100039731 432
16 3300025242 Ga0209258_100025 Ga0209258_100025370 432
17 3300025256 Ga0209759_1000693 Ga0209759_100069313 432
18 3300025272 Ga0209455_1000112 Ga0209455_100011246 432
19 3300035695 Ga0373927_0117991 Ga0373927_0117991_36_1457 435
20 3300006948 Ga0099826_10098202 Ga0099826_100982022 436
21 3300048920 Ga0496117_0002775 Ga0496117_0002775_56_1459 436
22 3300048925 Ga0496122_0006992 Ga0496122_0006992_9905_11308 436
23 3300048926 Ga0496123_0001223 Ga0496123_0001223_14830_16233 436
24 3300006175 Ga0070712_100000294 Ga0070712_10000029420 437
25 3300025906 Ga0207699_10030020 Ga0207699_100300202 437
26 3300025915 Ga0207693_10000785 Ga0207693_100007857 437
27 3300025916 Ga0207663_10003917 Ga0207663_100039174 437
28 3300009545 Ga0105237_10197536 Ga0105237_101975362 439
29 3300009148 Ga0105243_10000899 Ga0105243_1000089920 440
30 3300025935 Ga0207709_10001036 Ga0207709_1000103620 440
31 3300048924 Ga0496121_0000725 Ga0496121_0000725_37118_38521 440
32 3300021361 Ga0213872_10021523 Ga0213872_100215232 442
33 3300046461 Ga0495641_0025409 Ga0495641_0025409_459_1943 442
34 3300031251 Ga0265327_10000457 Ga0265327_1000045733 443
35 3300005329 Ga0070683_100002858 Ga0070683_10000285814 444
36 3300005564 Ga0070664_100011038 Ga0070664_1000110385 444
37 3300025944 Ga0207661_10000561 Ga0207661_1000056111 444
38 3300049571 Ga0501034_0034205 Ga0501034_0034205_36_1502 444
39 3300037466 Ga0395898_0004404 Ga0395898_0004404_2600_4120 445
40 3300009093 Ga0105240_10114526 Ga0105240_101145262 446
41 3300009148 Ga0105243_10155329 Ga0105243_101553291 446
42 3300009177 Ga0105248_10101935 Ga0105248_101019352 446
43 3300013105 Ga0157369_10037339 Ga0157369_100373394 446
44 3300013296 Ga0157374_10023561 Ga0157374_100235612 446
45 3300013306 Ga0163162_10049336 Ga0163162_100493362 446
46 3300013307 Ga0157372_10066925 Ga0157372_100669254 446
47 3300014325 Ga0163163_10040586 Ga0163163_100405865 446
48 3300035691 Ga0373931_0016554 Ga0373931_0016554_474_1928 446
49 3300038726 Ga0400490_60616 Ga0400490_60616_190_1665 446
50 3300048907 Ga0496104_0090257 Ga0496104_0090257_80_1534 446
51 3300048912 Ga0496109_0029141 Ga0496109_0029141_3409_4863 446
52 3300048915 Ga0496112_0074326 Ga0496112_0074326_1749_3203 446
53 3300009094 Ga0111539_10090748 Ga0111539_100907483 447
54 3300035695 Ga0373927_0074725 Ga0373927_0074725_165_1595 447
55 3300048907 Ga0496104_0081236 Ga0496104_0081236_1000_2463 447
56 3300049568 Ga0501031_0122058 Ga0501031_0122058_95_1597 447
57 3300049569 Ga0501032_0001746 Ga0501032_0001746_11155_12657 447
58 3300049572 Ga0501036_0001349 Ga0501036_0001349_6843_8345 447
59 3300049573 Ga0501037_0034234 Ga0501037_0034234_926_2428 447
60 3300049575 Ga0501039_0000978 Ga0501039_0000978_11804_13306 447
61 3300049580 Ga0501046_0003140 Ga0501046_0003140_7034_8536 447
62 3300049585 Ga0501069_0000472 Ga0501069_0000472_14699_16201 447
63 3300049586 Ga0501070_0004700 Ga0501070_0004700_81_1583 447
64 3300049589 Ga0501073_0002768 Ga0501073_0002768_4635_6137 447
65 3300049742 Ga0501080_0000935 Ga0501080_0000935_6439_7941 447
66 3300049744 Ga0501083_0002415 Ga0501083_0002415_81_1583 447
67 3300054114 Ga0501084_0066039 Ga0501084_0066039_1454_2956 447
68 3300013102 Ga0157371_10000484 Ga0157371_1000048439 448
69 3300046459 Ga0495629_0000048 Ga0495629_0000048_98103_99587 448
70 3300046463 Ga0495653_0000586 Ga0495653_0000586_21834_23318 448
71 3300046472 Ga0495580_0004366 Ga0495580_0004366_5799_7283 448
72 3300046473 Ga0495582_0005770 Ga0495582_0005770_1979_3463 448
73 3300046477 Ga0495664_0073593 Ga0495664_0073593_346_1830 448
74 3300046680 Ga0495646_0001843 Ga0495646_0001843_6390_7874 448
75 3300046689 Ga0495613_0028101 Ga0495613_0028101_32_1516 448
76 3300047319 Ga0495674_0062886 Ga0495674_0062886_1416_2900 448
77 3300047673 Ga0495593_0001185 Ga0495593_0001185_3243_4727 448
78 3300048906 Ga0496103_0005654 Ga0496103_0005654_5948_7411 448
79 3300005335 Ga0070666_10013323 Ga0070666_100133234 449
80 3300005336 Ga0070680_100073945 Ga0070680_1000739452 449
81 3300005337 Ga0070682_100036306 Ga0070682_1000363063 449
82 3300005339 Ga0070660_100044581 Ga0070660_1000445812 449
83 3300005347 Ga0070668_100021287 Ga0070668_1000212871 449
84 3300005367 Ga0070667_100074269 Ga0070667_1000742691 449
85 3300005445 Ga0070708_100002957 Ga0070708_1000029577 449
86 3300005457 Ga0070662_100008948 Ga0070662_1000089484 449
87 3300005467 Ga0070706_100000296 Ga0070706_10000029642 449
88 3300005536 Ga0070697_100000323 Ga0070697_10000032310 449
89 3300005548 Ga0070665_100080354 Ga0070665_1000803542 449
90 3300005578 Ga0068854_100022988 Ga0068854_1000229883 449
91 3300005614 Ga0068856_100165402 Ga0068856_1001654022 449
92 3300005719 Ga0068861_100043660 Ga0068861_1000436602 449
93 3300005834 Ga0068851_10023096 Ga0068851_100230963 449
94 3300005841 Ga0068863_100136666 Ga0068863_1001366662 449
95 3300005843 Ga0068860_100063833 Ga0068860_1000638331 449
96 3300006028 Ga0070717_10234518 Ga0070717_102345181 449
97 3300006173 Ga0070716_100006044 Ga0070716_1000060444 449
98 3300006237 Ga0097621_100089805 Ga0097621_1000898052 449
99 3300006358 Ga0068871_100023442 Ga0068871_1000234424 449
100 3300009094 Ga0111539_10000802 Ga0111539_1000080225 449
101 3300009098 Ga0105245_10143029 Ga0105245_101430291 449
102 3300009174 Ga0105241_10033772 Ga0105241_100337722 449
103 3300009176 Ga0105242_10169910 Ga0105242_101699101 449
104 3300013296 Ga0157374_10019013 Ga0157374_100190138 449
105 3300013306 Ga0163162_10170182 Ga0163162_101701822 449
106 3300014968 Ga0157379_10001668 Ga0157379_100016687 449
107 3300014968 Ga0157379_10033535 Ga0157379_100335352 449
108 3300025910 Ga0207684_10006462 Ga0207684_100064623 449
109 3300025912 Ga0207707_10007054 Ga0207707_100070548 449
110 3300025919 Ga0207657_10004616 Ga0207657_100046162 449
111 3300025921 Ga0207652_10009055 Ga0207652_100090555 449
112 3300025927 Ga0207687_10039305 Ga0207687_100393053 449
113 3300025933 Ga0207706_10004921 Ga0207706_1000492110 449
114 3300025941 Ga0207711_10003212 Ga0207711_100032123 449
115 3300026088 Ga0207641_10029904 Ga0207641_100299043 449
116 3300026116 Ga0207674_10056122 Ga0207674_100561222 449
117 3300026118 Ga0207675_100065996 Ga0207675_1000659963 449
118 3300027907 Ga0207428_10000948 Ga0207428_1000094821 449
119 3300046472 Ga0495580_0003320 Ga0495580_0003320_5341_6819 449
120 3300048905 Ga0496102_0010411 Ga0496102_0010411_4450_5997 449
121 3300048910 Ga0496107_0080843 Ga0496107_0080843_50_1618 449
122 3300050511 nmdc:mga08y16_362_c1 nmdc:mga08y16_362_c1_24263_25690 449
123 3300005981 Ga0081538_10022845 Ga0081538_100228452 450
124 3300006048 Ga0075363_100035842 Ga0075363_1000358423 450
125 3300009101 Ga0105247_10051979 Ga0105247_100519792 450
126 3300013102 Ga0157371_10002539 Ga0157371_1000253911 450
127 3300031911 Ga0307412_10032615 Ga0307412_100326153 450
128 iso_pu_bacteria 2510065053 2510282688 450
129 iso_pu_bacteria 2510065055 2510295344 450
130 iso_pu_bacteria 2510065058 2510311032 450
131 iso_pu_bacteria 2773857672 2774129177 450
132 iso_pu_bacteria 2917832318 2917833299 450
133 iso_pu_bacteria 2919125081 2919126164 450
134 iso_pu_bacteria 2974298342 2974302380 450
135 iso_pu_bacteria 2984499530 2984500066 450
136 iso_pu_bacteria 2984504281 2984506562 450
137 iso_pu_bacteria 8016728285 8016731421 450
138 3300046538 Ga0495609_0003133 Ga0495609_0003133_1622_3172 452
139 3300031911 Ga0307412_10021696 Ga0307412_100216962 453
140 3300005563 Ga0068855_100002110 Ga0068855_1000021109 454
141 3300009093 Ga0105240_10004838 Ga0105240_100048386 454
142 3300025913 Ga0207695_10000242 Ga0207695_1000024262 454
143 3300025949 Ga0207667_10001688 Ga0207667_100016882 454
144 3300046457 Ga0495590_0026649 Ga0495590_0026649_364_1899 454
145 3300046472 Ga0495580_0007545 Ga0495580_0007545_2278_3813 454
146 3300046474 Ga0495605_0005090 Ga0495605_0005090_3020_4555 454
147 3300046515 Ga0495620_0028545 Ga0495620_0028545_781_2316 454
148 3300046517 Ga0495630_0000996 Ga0495630_0000996_14895_16430 454
149 3300046531 Ga0495665_0023346 Ga0495665_0023346_21_1571 454
150 3300046665 Ga0495661_0057481 Ga0495661_0057481_364_1914 454
151 3300046794 Ga0495589_0026479 Ga0495589_0026479_873_2408 454
152 3300047319 Ga0495674_0027815 Ga0495674_0027815_1363_2898 454
153 3300047446 Ga0495679_000254 Ga0495679_000254_4765_6300 454
154 3300047472 Ga0495686_0023380 Ga0495686_0023380_2387_3922 454
155 3300048088 Ga0495602_0044073 Ga0495602_0044073_897_2432 454
156 3300048091 Ga0495626_0022570 Ga0495626_0022570_173_1723 454
157 3300049459 Ga0495678_024729 Ga0495678_024729_10_1545 454
158 3300049460 Ga0495682_0004841 Ga0495682_0004841_1679_3229 454
159 3300005353 Ga0070669_100166125 Ga0070669_1001661251 455
160 3300021361 Ga0213872_10000007 Ga0213872_1000000776 455
161 3300025256 Ga0209759_1000028 Ga0209759_1000028183 455
162 3300025986 Ga0207658_10110066 Ga0207658_101100661 455
163 3300039447 Ga0436361_0163583 Ga0436361_0163583_157129_158691 455
164 iso_pu_bacteria 2900634093 2900640072 455
165 iso_pu_bacteria 642555113 642617226 455
166 3300003322 rootL2_10011935 rootL2_100119353 456
167 3300003354 JGI25160J50197_1000036 JGI25160J50197_100003695 456
168 3300003775 Ga0055524_1000003 Ga0055524_1000003254 456
169 3300005262 Ga0065165_1000533 Ga0065165_100053350 456
170 3300016635 Ga0183361_10021 Ga0183361_1002162 456
171 3300025299 Ga0209256_1000007 Ga0209256_1000007112 456
172 3300025302 Ga0207426_1000014 Ga0207426_1000014374 456
173 3300031344 Ga0265316_10072913 Ga0265316_100729131 456
174 3300037471 Ga0395905_0000009 Ga0395905_0000009_249200_250738 456
175 3300037471 Ga0395905_0029978 Ga0395905_0029978_2250_3845 456
176 3300046506 Ga0495583_0020506 Ga0495583_0020506_1252_2805 456
177 3300046558 Ga0495633_0027304 Ga0495633_0027304_1015_2427 456
178 3300047320 Ga0495672_0004236 Ga0495672_0004236_5253_6665 456
179 3300048903 Ga0496100_0000124 Ga0496100_0000124_39833_41386 456
180 3300048904 Ga0496101_0000147 Ga0496101_0000147_35934_37487 456
181 3300048905 Ga0496102_0000057 Ga0496102_0000057_50944_52497 456
182 3300048906 Ga0496103_0000142 Ga0496103_0000142_34399_35952 456
183 3300048907 Ga0496104_0048089 Ga0496104_0048089_18_1571 456
184 3300048909 Ga0496106_0060905 Ga0496106_0060905_662_2215 456
185 3300048915 Ga0496112_0012830 Ga0496112_0012830_1930_3483 456
186 3300048920 Ga0496117_0000118 Ga0496117_0000118_51453_53006 456
187 3300048921 Ga0496118_0000068 Ga0496118_0000068_50925_52478 456
188 3300048922 Ga0496119_0016893 Ga0496119_0016893_3753_5306 456
189 3300048924 Ga0496121_0002363 Ga0496121_0002363_6161_7714 456
190 3300048924 Ga0496121_0012695 Ga0496121_0012695_5201_6754 456
191 iso_pu_bacteria 2513237166 2514048441 456
192 iso_pu_bacteria 2562617112 2563057613 456
193 iso_pu_bacteria 2711768613 2713473689 456
194 iso_pu_bacteria 642555112 642597066 456
195 3300006948 Ga0099826_10000002 Ga0099826_10000002691 457
196 3300027666 Ga0209282_1000001 Ga0209282_1000001462 457
197 3300046522 Ga0495643_0023957 Ga0495643_0023957_1293_2756 457
198 3300048091 Ga0495626_0003577 Ga0495626_0003577_1712_3175 457
199 3300038735 Ga0400485_18728 Ga0400485_18728_596_2122 458
200 3300038741 Ga0400488_47385 Ga0400488_47385_3238_4785 458
201 3300038742 Ga0400486_04403 Ga0400486_04403_6619_8145 458
202 3300039062 Ga0400483_290837 Ga0400483_290837_8824_10347 458
203 3300039093 Ga0400489_60328 Ga0400489_60328_213_1739 458
204 3300039093 Ga0400489_69096 Ga0400489_69096_1225_2772 458
205 3300046460 Ga0495638_0003175 Ga0495638_0003175_9693_11243 460
206 3300046462 Ga0495651_0039407 Ga0495651_0039407_1901_3436 460
207 3300046506 Ga0495583_0001755 Ga0495583_0001755_697_2247 460
208 3300046678 Ga0495599_0010641 Ga0495599_0010641_3384_4919 460
209 3300046679 Ga0495623_0001035 Ga0495623_0001035_8137_9672 460
210 3300047317 Ga0495604_0001868 Ga0495604_0001868_3233_4768 460
211 3300047322 Ga0495680_0033785 Ga0495680_0033785_2541_4076 460
212 3300047443 Ga0495687_051424 Ga0495687_051424_79_1614 460
213 3300048088 Ga0495602_0007926 Ga0495602_0007926_7068_8603 460
214 3300048924 Ga0496121_0093017 Ga0496121_0093017_559_2277 460
215 iso_pu_bacteria 2791355137 2792833895 460
216 iso_pu_bacteria 2904615490 2904622547 460
217 iso_pu_bacteria 2510065053 2510283508 462
218 iso_pu_bacteria 2510065055 2510292664 462
219 iso_pu_bacteria 2510065058 2510311756 462
220 iso_pu_bacteria 2599185161 2599361668 462
221 iso_pu_bacteria 2599185162 2599367990 462
222 iso_pu_bacteria 2599185163 2599374779 462
223 iso_pu_bacteria 2599185166 2599393637 462
224 iso_pu_bacteria 2599185168 2599405404 462
225 iso_pu_bacteria 2773857672 2774128724 462
226 iso_pu_bacteria 2842324504 2842325421 462
227 iso_pu_bacteria 2842348783 2842349700 462
228 iso_pu_bacteria 2842454564 2842455064 462
229 iso_pu_bacteria 2917832318 2917834646 462
230 iso_pu_bacteria 2919125081 2919130056 462
231 iso_pu_bacteria 2974298342 2974299153 462
232 iso_pu_bacteria 2984499530 2984501468 462
233 iso_pu_bacteria 2984504281 2984507974 462
234 iso_pu_bacteria 8016728285 8016729854 462
235 iso_pu_bacteria 2511231015 2511318403 463
236 iso_pu_bacteria 2554235341 2555669183 463
237 iso_pu_bacteria 2599185160 2599357916 463
238 iso_pu_bacteria 2599185164 2599383081 463
239 iso_pu_bacteria 2599185165 2599389536 463
240 iso_pu_bacteria 2599185181 2599464732 463
241 iso_pu_bacteria 2599185182 2599468278 463
242 iso_pu_bacteria 2599185186 2599493755 463
243 iso_pu_bacteria 2599185356 2600217456 463
244 iso_pu_bacteria 2600255313 2601777626 463
245 iso_pu_bacteria 2667528171 2671098307 463
246 iso_pu_bacteria 2818991464 2819703385 463
247 iso_pu_bacteria 2844665904 2844669609 463
248 iso_pu_bacteria 2917070673 2917072983 463
249 iso_pu_bacteria 2935353572 2935359412 463
250 iso_pu_bacteria 637000220 637319530 463
251 iso_pu_bacteria 8019769354 8019775630 463
252 iso_pu_bacteria 8057798959 8057799627 463
253 3300009036 Ga0105244_10073457 Ga0105244_100734571 466
254 3300013105 Ga0157369_10009853 Ga0157369_100098531 466
255 3300013307 Ga0157372_10069526 Ga0157372_100695263 466
256 3300014497 Ga0182008_10015391 Ga0182008_100153913 466
257 3300046474 Ga0495605_0015123 Ga0495605_0015123_489_1889 466
258 3300046501 Ga0495607_0002888 Ga0495607_0002888_4919_6319 466
259 3300046515 Ga0495620_0000007 Ga0495620_0000007_70257_71660 466
260 3300046519 Ga0495632_0001529 Ga0495632_0001529_16238_17641 466
261 3300046522 Ga0495643_0000789 Ga0495643_0000789_27304_28707 466
262 3300002737 JGI25162J39368_1000050 JGI25162J39368_100005015 467
263 3300002771 JGI25163J39215_1000384 JGI25163J39215_100038415 467
264 3300002772 JGI25164J39214_1000025 JGI25164J39214_1000025146 467
265 3300003214 JGI25165J46597_1000176 JGI25165J46597_100017690 467
266 3300009011 Ga0105251_10001703 Ga0105251_100017037 467
267 3300009092 Ga0105250_10000833 Ga0105250_100008336 467
268 3300025207 Ga0209760_100033 Ga0209760_10003374 467
269 3300025233 Ga0209437_100002 Ga0209437_10000277 467
270 3300025261 Ga0209233_1000004 Ga0209233_10000041349 467
271 3300025711 Ga0207696_1000910 Ga0207696_10009106 467
272 3300025735 Ga0207713_1001502 Ga0207713_10015027 467
273 3300048920 Ga0496117_0001667 Ga0496117_0001667_7944_9350 467
274 3300048921 Ga0496118_0001578 Ga0496118_0001578_19741_21147 467
275 3300048927 Ga0496124_0012887 Ga0496124_0012887_228_1634 467
276 3300048928 Ga0496125_0000506 Ga0496125_0000506_16388_17794 467
277 3300048929 Ga0496126_0007790 Ga0496126_0007790_10212_11618 467

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

29

92

0.96

PF00155

Aminotran_1_2

Aminotransferase class I and II

203

481

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ham-assembly1.cif.gz_A-2 crystal structure of transcriptional antiterminator from listeria monocytogenes egd-e 0.9641 3 83
6sbs-assembly1.cif.gz_A ytra from sulfolobus acidocaldarius, a gntr-family transcription factor 0.9589 5 82
2wv0-assembly5.cif.gz_I crystal structure of the gntr-hutc family member yvoa from bacillus subtilis 0.9582 6 79
2du9-assembly1.cif.gz_A crystal structure of the transcriptional factor from c.glutamicum 0.9562 14 81
7pq9-assembly7.cif.gz_KKK crystal structure of bacillus clausii pdxr at 2.8 angstroms resolution 0.9504 2 79
ID Description Score Start End Superfamily
af_O06550_14_120_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 1.002 14 79 1.10.10.10
4hamA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9892 5 79 1.10.10.10
af_P0ACM5_16_95_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9798 10 79 1.10.10.10
2wv0D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9662 14 79 1.10.10.10
af_Q2FWW6_10_126_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9605 14 83 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A349EU24-F1-model_v4 GntR family transcriptional regulator 0.9955 3 79 GO:0003677
GO:0003700
AF-A0A7X8C4W4-F1-model_v4 GntR family transcriptional regulator 0.9924 3 81 GO:0003677
GO:0003700
AF-A0A1E3A2V5-F1-model_v4 GntR family transcriptional regulator (HTH-type transcriptional repressor YtrA) 0.9924 3 79 GO:0003677
GO:0003700
AF-A0A2E8BEU3-F1-model_v4 GntR family transcriptional regulator 0.9906 3 79 GO:0003677
GO:0003700
AF-A0A2E0DXU2-F1-model_v4 GntR family transcriptional regulator 0.99 3 79 GO:0003677
GO:0003700

Feature Viewer

pLDDT pTM Quality
88.93 0.76 High
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Predicted Structure (AlphaFold2)

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