F381967
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 277 | 177 | 550 | 405 |
Family's Representative Sequence
| Representative Sequence | 3300046506|Ga0495583_0015535|Ga0495583_0015535_1765_3105 |
| Length | 446 |
| Sequence | MHPHLSHAYDSSAISRWPFHEQEEAVTSAVGNSTSGTPAGIPEYDISRPARCPLDPAPAMRARQEEGPLTRIRLWDGSTAWLVTGYDAHRAALSDLRVSVDPMRPGAPKLSAGEAAMAEALRKQGKSTIGMSFIMMDDPEHNRLRRMATSAFTIKRVEAIRPPTQRVVDDLIDKMLDGPKPADLVEAFALPVPSLVISELLGVPYDDHDFFQTNSTAIINRHTSGEDRLAARQQLLDYLDGLLGEKLTKPGEDLLSGLAERINAGELTREEATEMGVLMLFAGHETTANMITLGTLTLLQHPDQLALLRDSDDPKLIASAVDELLRWITITHGGLRRVALEDIEIAGQVIRAGEGIITVNETANRDASVFPDPDRLDITRDARRHVTFGYGIHQCLGQPLARMELQVVYPSLLRRIPTLALAADLEEIPFKHDGFVYGAYELPVTW |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 2 | 2162886011 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 3 | 3300002067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 | Metagenome | Rhizosphere |
| 4 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 5 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 6 | 3300003354 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS | Metagenome | Endosphere |
| 7 | 3300005288 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) | Metagenome | Rhizosphere |
| 8 | 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) | Metagenome | Rhizosphere |
| 9 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 12 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 15 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 16 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 17 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 18 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 19 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 20 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 21 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 22 | 3300006948 | Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 | Metagenome | Nodule |
| 23 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 24 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 25 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 26 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 27 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 28 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 29 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 30 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300020069 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 32 | 3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 33 | 3300020077 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 34 | 3300020080 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 35 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 36 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 37 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 38 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 57 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 58 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 59 | 3300030732 | Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 | Metagenome | Rhizosphere |
| 60 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 61 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 62 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 63 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 64 | 3300031838 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM | Metagenome | Unclassified |
| 65 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 66 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 67 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 68 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 69 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 70 | 3300042157 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 | Metagenome | Rhizosphere |
| 71 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 72 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 73 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 74 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 75 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 76 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 77 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 78 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046513 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300046674 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere | Metagenome | Rhizosphere |
| 89 | 3300046679 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere | Metagenome | Rhizosphere |
| 90 | 3300046680 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere | Metagenome | Rhizosphere |
| 91 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046810 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047447 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047470 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 103 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 104 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 124 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 125 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 126 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300053086 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere | Metagenome | Endosphere |
| 129 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 130 | 3300053107 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere | Metagenome | Endosphere |
| 131 | 3300053116 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere | Metagenome | Endosphere |
| 132 | 3300053131 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere | Metagenome | Endosphere |
| 133 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 134 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 135 | 3300053137 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere | Metagenome | Endosphere |
| 136 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 137 | 3300053149 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere | Metagenome | Endosphere |
| 138 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 139 | 3300053161 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere | Metagenome | Endosphere |
| 140 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 142 | 2515154123 | Trinickia symbiotica JPY347 | Isolate | Nodule |
| 143 | 2547132424 | Nocardia nova SH22a | Isolate | Unclassified |
| 144 | 2585427649 | Amycolatopsis japonica MG417-CF17, DSM 44213 | Isolate | Unclassified |
| 145 | 2643221647 | Streptomyces sp. Root369 | Isolate | Unclassified |
| 146 | 2675903060 | Nonomuraea wenchangensis CGMCC 4.5598 | Isolate | Rhizosphere |
| 147 | 2738541272 | Promicromonospora sp. AC04 | Isolate | Unclassified |
| 148 | 2786546132 | Streptomyces sp. W SAI-097 | Isolate | Unclassified |
| 149 | 2791355406 | Streptomyces rhizosphaericus NRRL B-24304 | Isolate | Unclassified |
| 150 | 2816332119 | Kribbella amoyensis DSM 24683 | Isolate | Rhizosphere |
| 151 | 2818991472 | Kitasatospora viridis DSM 44826 | Isolate | Rhizosphere |
| 152 | 2837268691 | Jiangella endophytica KE2-3 | Isolate | Rhizosphere |
| 153 | 2855683550 | Micromonospora sp. RP3T | Isolate | Unclassified |
| 154 | 2866612099 | Amycolatopsis suaedae 8-3EHSu | Isolate | Unclassified |
| 155 | 2867475112 | Streptomyces sp. TM32 | Isolate | Unclassified |
| 156 | 2883577096 | Roseococcus sp. SYP-B2431 | Isolate | Rhizosphere |
| 157 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 158 | 2895427314 | Nonomuraea sp. PA05 | Isolate | Unclassified |
| 159 | 2912723979 | Streptomyces sp. NEAU-sy36 | Isolate | Rhizosphere |
| 160 | 2917736166 | Amycolatopsis dendrobii DR6-1 | Isolate | Unclassified |
| 161 | 2954380949 | Streptomyces ciscaucasicus W1I15 | Isolate | Rhizosphere |
| 162 | 2966598605 | Kitasatospora papulosa SLBN-177 | Isolate | Rhizosphere |
| 163 | 2995463766 | Streptacidiphilus fuscans NEAU-YB345 | Isolate | Unclassified |
| 164 | 2997451912 | Streptomyces piniterrae jys28 | Isolate | Rhizosphere |
| 165 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 166 | 8003314358 | Amycolatopsis sp. MtRt-6 | Isolate | Unclassified |
| 167 | 8025530807 | Streptomyces sp. 4R-3d | Isolate | Unclassified |
| 168 | 8047710418 | Umezawaea endophytica DSM 103496 | Isolate | Unclassified |
| 169 | 8047893842 | Streptomyces cangkringensis DSM 41769 | Isolate | Rhizosphere |
| 170 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 171 | 8048356638 | Streptomyces rhizosphaericus DSM 41760 | Isolate | Rhizosphere |
| 172 | 8048369669 | Streptomyces indonesiensis DSM 41759 | Isolate | Rhizoplane |
| 173 | 8048379754 | Streptomyces asiaticus DSM 41761 | Isolate | Rhizosphere |
| 174 | 8054160619 | Streptomyces rhizoryzae RS10V-4 | Isolate | Rhizosphere |
| 175 | 8055066027 | Sphaerisporangium corydalis NEAU-YHS15 | Isolate | Unclassified |
| 176 | 8056207758 | Saccharopolyspora indica KCTC 29208 | Isolate | Rhizosphere |
| 177 | 8056829672 | Streptomyces barringtoniae JA03 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 81.95 |
| Metatranscriptomes | 3.25 |
| Isolates | 14.8 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 9.39 |
| Nodule | 0.72 |
| Rhizoplane | 1.08 |
| Rhizosphere | 68.95 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0495583_0015535 | 3300046506 | Bacteria | 4136 |
| 2 | MRS1b_contig_9173166 | 2162886011 | Bacteria | 1475 |
| 3 | JGI24735J21928_10012239 | 3300002067 | Bacteria | 2713 |
| 4 | JGI25406J46586_10000314 | 3300003203 | Bacteria | 21866 |
| 5 | JGI25406J46586_10001208 | 3300003203 | Bacteria | 12144 |
| 6 | rootH2_10106210 | 3300003320 | Bacteria | 9461 |
| 7 | JGI25160J50197_1007703 | 3300003354 | Bacteria | 4186 |
| 8 | JGI25160J50197_1011060 | 3300003354 | Bacteria | 3224 |
| 9 | JGI25160J50197_1013182 | 3300003354 | Bacteria | 2831 |
| 10 | JGI25160J50197_1014192 | 3300003354 | Bacteria | 2675 |
| 11 | Ga0065714_10065566 | 3300005288 | Bacteria | 9371 |
| 12 | Ga0065712_10014547 | 3300005290 | Bacteria | 2876 |
| 13 | Ga0070668_100007854 | 3300005347 | Bacteria | 7923 |
| 14 | Ga0070668_100072802 | 3300005347 | Bacteria | 2678 |
| 15 | Ga0070714_100000182 | 3300005435 | Bacteria | 50060 |
| 16 | Ga0070714_100007575 | 3300005435 | Bacteria | 8456 |
| 17 | Ga0070710_10000103 | 3300005437 | Bacteria | 39384 |
| 18 | Ga0070663_100000176 | 3300005455 | Bacteria | 32494 |
| 19 | Ga0070663_100001052 | 3300005455 | Bacteria | 15097 |
| 20 | Ga0070665_100001693 | 3300005548 | Bacteria | 25360 |
| 21 | Ga0070665_100108241 | 3300005548 | Bacteria | 2782 |
| 22 | Ga0068855_100024660 | 3300005563 | Bacteria | 7194 |
| 23 | Ga0068854_100005713 | 3300005578 | Bacteria | 7860 |
| 24 | Ga0068856_100211847 | 3300005614 | Bacteria | 1953 |
| 25 | Ga0068852_100013034 | 3300005616 | Bacteria | 6346 |
| 26 | Ga0068861_100045669 | 3300005719 | Bacteria | 3300 |
| 27 | Ga0068863_100058778 | 3300005841 | Bacteria | 3638 |
| 28 | Ga0081455_10000753 | 3300005937 | Bacteria | 42080 |
| 29 | Ga0081539_10000186 | 3300005985 | Bacteria | 147547 |
| 30 | Ga0081539_10002669 | 3300005985 | Bacteria | 24283 |
| 31 | Ga0099826_10043617 | 3300006948 | Bacteria | 3085 |
| 32 | Ga0105244_10000100 | 3300009036 | Bacteria | 89219 |
| 33 | Ga0105238_10022324 | 3300009551 | Bacteria | 6452 |
| 34 | Ga0105239_10024817 | 3300010375 | Bacteria | 6604 |
| 35 | Ga0105246_10008405 | 3300011119 | Bacteria | 6345 |
| 36 | Ga0105246_10044826 | 3300011119 | Bacteria | 3008 |
| 37 | Ga0157370_10294367 | 3300013104 | Bacteria | 1499 |
| 38 | Ga0157369_10000119 | 3300013105 | Bacteria | 111542 |
| 39 | Ga0157369_10012053 | 3300013105 | Bacteria | 9817 |
| 40 | Ga0157374_10032320 | 3300013296 | Bacteria | 4763 |
| 41 | Ga0163162_10090189 | 3300013306 | Bacteria | 3146 |
| 42 | Ga0197907_10349590 | 3300020069 | Bacteria | 2444 |
| 43 | Ga0206356_10603729 | 3300020070 | Bacteria | 1513 |
| 44 | Ga0206351_10470483 | 3300020077 | Bacteria | 1660 |
| 45 | Ga0206350_10171308 | 3300020080 | Bacteria | 1873 |
| 46 | Ga0206350_10730117 | 3300020080 | Bacteria | 2585 |
| 47 | Ga0206350_11203497 | 3300020080 | Bacteria | 1640 |
| 48 | Ga0224712_10004682 | 3300022467 | Bacteria | 3718 |
| 49 | Ga0224712_10024619 | 3300022467 | Bacteria | 2105 |
| 50 | Ga0224712_10029625 | 3300022467 | Bacteria | 1968 |
| 51 | Ga0209677_100306 | 3300025253 | Bacteria | 32088 |
| 52 | Ga0207426_1000662 | 3300025302 | Bacteria | 42226 |
| 53 | Ga0207426_1001716 | 3300025302 | Bacteria | 16791 |
| 54 | Ga0207426_1001729 | 3300025302 | Bacteria | 16693 |
| 55 | Ga0207426_1002519 | 3300025302 | Bacteria | 11513 |
| 56 | Ga0207426_1003251 | 3300025302 | Bacteria | 9098 |
| 57 | Ga0207655_1000238 | 3300025728 | Bacteria | 90306 |
| 58 | Ga0207692_10000070 | 3300025898 | Bacteria | 29852 |
| 59 | Ga0207647_10033624 | 3300025904 | Bacteria | 3282 |
| 60 | Ga0207695_10025862 | 3300025913 | Bacteria | 6560 |
| 61 | Ga0207671_10000912 | 3300025914 | Bacteria | 37313 |
| 62 | Ga0207694_10001607 | 3300025924 | Bacteria | 19051 |
| 63 | Ga0207664_10000185 | 3300025929 | Bacteria | 47364 |
| 64 | Ga0207664_10020795 | 3300025929 | Bacteria | 4870 |
| 65 | Ga0207667_10021728 | 3300025949 | Bacteria | 7110 |
| 66 | Ga0207668_10034393 | 3300025972 | Bacteria | 3365 |
| 67 | Ga0207640_10010868 | 3300025981 | Bacteria | 5137 |
| 68 | Ga0207677_10099483 | 3300026023 | Bacteria | 2136 |
| 69 | Ga0207678_10000062 | 3300026067 | Bacteria | 84389 |
| 70 | Ga0207678_10000560 | 3300026067 | Bacteria | 33987 |
| 71 | Ga0207678_10042010 | 3300026067 | Bacteria | 3963 |
| 72 | Ga0207702_10020144 | 3300026078 | Bacteria | 5525 |
| 73 | Ga0207641_10033492 | 3300026088 | Bacteria | 4268 |
| 74 | Ga0207675_100024267 | 3300026118 | Bacteria | 5639 |
| 75 | Ga0207698_10038638 | 3300026142 | Bacteria | 3528 |
| 76 | Ga0268266_10044785 | 3300028379 | Bacteria | 3783 |
| 77 | Ga0268264_10010933 | 3300028381 | Bacteria | 7498 |
| 78 | Ga0307515_10091390 | 3300028794 | Bacteria | 3804 |
| 79 | Ga0307515_10098425 | 3300028794 | Bacteria | 3562 |
| 80 | Ga0307515_10114154 | 3300028794 | Bacteria | 3125 |
| 81 | Ga0307511_10000023 | 3300030521 | Bacteria | 113251 |
| 82 | Ga0307511_10000188 | 3300030521 | Bacteria | 61440 |
| 83 | Ga0307511_10000762 | 3300030521 | Bacteria | 34343 |
| 84 | Ga0307511_10049584 | 3300030521 | Bacteria | 3395 |
| 85 | Ga0307512_10015525 | 3300030522 | Bacteria | 7055 |
| 86 | Ga0307512_10017859 | 3300030522 | Bacteria | 6494 |
| 87 | Ga0307512_10036586 | 3300030522 | Bacteria | 4160 |
| 88 | Ga0307512_10055524 | 3300030522 | Bacteria | 3122 |
| 89 | Ga0307512_10083021 | 3300030522 | Bacteria | 2288 |
| 90 | Ga0307512_10099933 | 3300030522 | Bacteria | 1971 |
| 91 | Ga0316176_1214449 | 3300030732 | Bacteria | 4147 |
| 92 | Ga0307513_10002153 | 3300031456 | Bacteria | 27557 |
| 93 | Ga0307513_10073270 | 3300031456 | Bacteria | 3566 |
| 94 | Ga0307513_10133549 | 3300031456 | Bacteria | 2422 |
| 95 | Ga0307509_10022805 | 3300031507 | Bacteria | 7045 |
| 96 | Ga0307509_10102128 | 3300031507 | Bacteria | 2900 |
| 97 | Ga0307508_10001207 | 3300031616 | Bacteria | 29652 |
| 98 | Ga0307508_10045577 | 3300031616 | Bacteria | 3917 |
| 99 | Ga0307508_10115566 | 3300031616 | Bacteria | 2285 |
| 100 | Ga0307508_10139617 | 3300031616 | Bacteria | 2026 |
| 101 | Ga0307516_10015163 | 3300031730 | Bacteria | 8117 |
| 102 | Ga0307516_10109155 | 3300031730 | Bacteria | 2573 |
| 103 | Ga0307518_10000560 | 3300031838 | Bacteria | 28288 |
| 104 | Ga0307518_10000954 | 3300031838 | Bacteria | 21580 |
| 105 | Ga0307518_10052384 | 3300031838 | Bacteria | 2965 |
| 106 | Ga0307518_10162275 | 3300031838 | Bacteria | 1534 |
| 107 | Ga0307518_10191785 | 3300031838 | Bacteria | 1368 |
| 108 | Ga0307507_10061035 | 3300033179 | Bacteria | 3512 |
| 109 | Ga0307507_10172474 | 3300033179 | Bacteria | 1568 |
| 110 | Ga0307510_10108248 | 3300033180 | Bacteria | 2533 |
| 111 | Ga0307510_10115453 | 3300033180 | Bacteria | 2410 |
| 112 | Ga0373956_0000970 | 3300035119 | Bacteria | 11908 |
| 113 | Ga0373956_0001303 | 3300035119 | Bacteria | 10323 |
| 114 | Ga0395900_0031852 | 3300037418 | Bacteria | 5421 |
| 115 | Ga0451853_1348786 | 3300041512 | Bacteria | 3346 |
| 116 | Ga0439458_0002993 | 3300042157 | Bacteria | 4043 |
| 117 | Ga0466969_0000572 | 3300044656 | Bacteria | 20108 |
| 118 | Ga0466969_0013884 | 3300044656 | Bacteria | 4239 |
| 119 | Ga0466969_0017063 | 3300044656 | Bacteria | 3795 |
| 120 | Ga0466966_0002071 | 3300044684 | Bacteria | 13006 |
| 121 | Ga0466966_0004205 | 3300044684 | Bacteria | 9496 |
| 122 | Ga0466966_0079699 | 3300044684 | Bacteria | 2041 |
| 123 | Ga0466961_0001312 | 3300044693 | Bacteria | 15349 |
| 124 | Ga0466961_0004225 | 3300044693 | Bacteria | 8990 |
| 125 | Ga0466961_0006359 | 3300044693 | Bacteria | 7504 |
| 126 | Ga0466961_0010806 | 3300044693 | Bacteria | 5831 |
| 127 | Ga0466961_0074341 | 3300044693 | Bacteria | 2155 |
| 128 | Ga0466971_0000293 | 3300044719 | Bacteria | 19122 |
| 129 | Ga0466970_0009015 | 3300044765 | Bacteria | 5033 |
| 130 | Ga0466970_0018852 | 3300044765 | Bacteria | 3574 |
| 131 | Ga0466970_0020548 | 3300044765 | Bacteria | 3432 |
| 132 | Ga0466970_0026046 | 3300044765 | Bacteria | 3065 |
| 133 | Ga0466959_0001647 | 3300045049 | Bacteria | 13808 |
| 134 | Ga0466959_0004177 | 3300045049 | Bacteria | 9620 |
| 135 | Ga0466959_0077898 | 3300045049 | Bacteria | 2391 |
| 136 | Ga0466958_0049434 | 3300045836 | Bacteria | 2544 |
| 137 | Ga0466958_0081371 | 3300045836 | Bacteria | 1993 |
| 138 | Ga0495592_0029156 | 3300046454 | Bacteria | 4178 |
| 139 | Ga0495594_0091390 | 3300046499 | Bacteria | 1706 |
| 140 | Ga0495607_0013590 | 3300046501 | Bacteria | 5329 |
| 141 | Ga0495606_0015234 | 3300046507 | Bacteria | 5937 |
| 142 | Ga0495616_0024014 | 3300046513 | Bacteria | 3275 |
| 143 | Ga0495643_0010918 | 3300046522 | Bacteria | 5563 |
| 144 | Ga0495652_0000664 | 3300046529 | Bacteria | 39960 |
| 145 | Ga0495668_0001208 | 3300046616 | Bacteria | 26137 |
| 146 | Ga0495625_0080618 | 3300046660 | Bacteria | 2266 |
| 147 | Ga0495635_0001754 | 3300046663 | Bacteria | 14626 |
| 148 | Ga0495588_0096166 | 3300046674 | Bacteria | 1553 |
| 149 | Ga0495623_0031900 | 3300046679 | Bacteria | 3387 |
| 150 | Ga0495623_0039323 | 3300046679 | Bacteria | 3024 |
| 151 | Ga0495646_0010605 | 3300046680 | Bacteria | 5853 |
| 152 | Ga0495613_0007719 | 3300046689 | Bacteria | 8001 |
| 153 | Ga0495624_0087834 | 3300046690 | Bacteria | 1920 |
| 154 | Ga0495670_0012250 | 3300046691 | Bacteria | 4217 |
| 155 | Ga0495660_0004099 | 3300046810 | Bacteria | 8896 |
| 156 | Ga0495660_0053938 | 3300046810 | Bacteria | 2180 |
| 157 | Ga0495680_0081144 | 3300047322 | Bacteria | 2449 |
| 158 | Ga0495683_0000393 | 3300047323 | Bacteria | 35386 |
| 159 | Ga0495683_0000501 | 3300047323 | Bacteria | 30253 |
| 160 | Ga0495687_002699 | 3300047443 | Bacteria | 13767 |
| 161 | Ga0495687_004381 | 3300047443 | Bacteria | 9592 |
| 162 | Ga0495687_006780 | 3300047443 | Bacteria | 6925 |
| 163 | Ga0495687_008514 | 3300047443 | Bacteria | 5866 |
| 164 | Ga0495687_014034 | 3300047443 | Bacteria | 4145 |
| 165 | Ga0495687_020027 | 3300047443 | Bacteria | 3269 |
| 166 | Ga0495687_058378 | 3300047443 | Bacteria | 1600 |
| 167 | Ga0495675_0013053 | 3300047444 | Bacteria | 5239 |
| 168 | Ga0495685_000399 | 3300047447 | Bacteria | 13755 |
| 169 | Ga0495681_0077766 | 3300047470 | Bacteria | 1488 |
| 170 | Ga0495602_0146537 | 3300048088 | Bacteria | 1862 |
| 171 | Ga0496102_0202440 | 3300048905 | Bacteria | 1871 |
| 172 | Ga0496119_0000125 | 3300048922 | Bacteria | 108373 |
| 173 | Ga0501031_0001918 | 3300049568 | Bacteria | 13108 |
| 174 | Ga0501031_0050138 | 3300049568 | Bacteria | 2720 |
| 175 | Ga0501032_0001420 | 3300049569 | Bacteria | 19022 |
| 176 | Ga0501032_0081903 | 3300049569 | Bacteria | 2147 |
| 177 | Ga0501033_0000278 | 3300049570 | Bacteria | 49428 |
| 178 | Ga0501033_0002000 | 3300049570 | Bacteria | 17760 |
| 179 | Ga0501034_0001395 | 3300049571 | Bacteria | 32488 |
| 180 | Ga0501034_0005882 | 3300049571 | Bacteria | 13323 |
| 181 | Ga0501034_0013683 | 3300049571 | Bacteria | 8342 |
| 182 | Ga0501036_0000264 | 3300049572 | Bacteria | 35768 |
| 183 | Ga0501036_0000696 | 3300049572 | Bacteria | 24804 |
| 184 | Ga0501036_0021163 | 3300049572 | Bacteria | 5463 |
| 185 | Ga0501037_0000231 | 3300049573 | Bacteria | 48188 |
| 186 | Ga0501037_0012396 | 3300049573 | Bacteria | 6277 |
| 187 | Ga0501037_0146688 | 3300049573 | Bacteria | 1688 |
| 188 | Ga0501038_0013809 | 3300049574 | Bacteria | 7359 |
| 189 | Ga0501038_0024592 | 3300049574 | Bacteria | 5371 |
| 190 | Ga0501038_0070799 | 3300049574 | Bacteria | 2960 |
| 191 | Ga0501039_0002992 | 3300049575 | Bacteria | 12645 |
| 192 | Ga0501039_0012918 | 3300049575 | Bacteria | 6385 |
| 193 | Ga0501042_0004124 | 3300049578 | Bacteria | 9234 |
| 194 | Ga0501043_0000263 | 3300049579 | Bacteria | 47686 |
| 195 | Ga0501043_0002523 | 3300049579 | Bacteria | 15477 |
| 196 | Ga0501046_0004477 | 3300049580 | Bacteria | 12670 |
| 197 | Ga0501047_0000054 | 3300049581 | Bacteria | 149749 |
| 198 | Ga0501047_0004451 | 3300049581 | Bacteria | 13192 |
| 199 | Ga0501047_0055197 | 3300049581 | Bacteria | 3842 |
| 200 | Ga0501047_0056204 | 3300049581 | Bacteria | 3805 |
| 201 | Ga0501047_0166122 | 3300049581 | Bacteria | 2077 |
| 202 | Ga0501048_0000103 | 3300049582 | Bacteria | 46821 |
| 203 | Ga0501068_0046770 | 3300049584 | Bacteria | 2609 |
| 204 | Ga0501070_0002144 | 3300049586 | Bacteria | 17333 |
| 205 | Ga0501070_0011126 | 3300049586 | Bacteria | 7595 |
| 206 | Ga0501070_0015568 | 3300049586 | Bacteria | 6395 |
| 207 | Ga0501073_0010040 | 3300049589 | Bacteria | 6961 |
| 208 | Ga0501074_0006101 | 3300049590 | Bacteria | 8702 |
| 209 | Ga0501074_0038400 | 3300049590 | Bacteria | 3470 |
| 210 | Ga0501083_0068848 | 3300049744 | Bacteria | 2355 |
| 211 | Ga0501035_0000509 | 3300049822 | Bacteria | 43847 |
| 212 | Ga0501035_0008818 | 3300049822 | Bacteria | 9389 |
| 213 | Ga0501044_0016870 | 3300049823 | Bacteria | 7835 |
| 214 | Ga0501044_0048760 | 3300049823 | Bacteria | 4373 |
| 215 | Ga0501044_0049569 | 3300049823 | Bacteria | 4335 |
| 216 | nmdc:mga03n38_124909_c1 | 3300050490 | Bacteria | 1269 |
| 217 | nmdc:mga09592_341438_c1 | 3300050508 | Bacteria | 1296 |
| 218 | Ga0495601_0025238 | 3300053077 | Bacteria | 3663 |
| 219 | Ga0495612_0000574 | 3300053078 | Bacteria | 14798 |
| 220 | Ga0500578_0017382 | 3300053086 | Bacteria | 4620 |
| 221 | Ga0500644_0002866 | 3300053088 | Bacteria | 4283 |
| 222 | Ga0500560_006552 | 3300053107 | Bacteria | 2673 |
| 223 | Ga0500592_006884 | 3300053116 | Bacteria | 1810 |
| 224 | Ga0500652_005047 | 3300053131 | Bacteria | 4125 |
| 225 | Ga0500658_0008389 | 3300053134 | Bacteria | 3817 |
| 226 | Ga0500559_0022214 | 3300053136 | Bacteria | 2691 |
| 227 | Ga0500561_0005877 | 3300053137 | Bacteria | 2309 |
| 228 | Ga0500573_0012082 | 3300053140 | Bacteria | 4845 |
| 229 | Ga0500573_0081722 | 3300053140 | Bacteria | 1835 |
| 230 | Ga0500600_0034936 | 3300053149 | Bacteria | 2931 |
| 231 | Ga0500616_0038683 | 3300053153 | Bacteria | 2575 |
| 232 | Ga0500634_0026323 | 3300053161 | Bacteria | 3168 |
| 233 | Ga0501084_0000908 | 3300054114 | Bacteria | 22886 |
| 234 | Ga0466962_0000317 | 3300061719 | Bacteria | 20630 |
| 235 | 2515691921 | 2515154123 | Bacteria | 6387382 |
| 236 | 2548694133 | 2547132424 | Bacteria | 8348532 |
| 237 | 2586060836 | 2585427649 | Bacteria | 9053857 |
| 238 | 2644263571 | 2643221647 | Bacteria | 10741251 |
| 239 | 2676491064 | 2675903060 | Bacteria | 10051191 |
| 240 | 2738696038 | 2738541272 | Bacteria | 6848551 |
| 241 | 2786672329 | 2786546132 | Bacteria | 10419719 |
| 242 | 2793977519 | 2791355406 | Bacteria | 11364898 |
| 243 | 2816426478 | 2816332119 | Bacteria | 8120218 |
| 244 | 2819739147 | 2818991472 | Bacteria | 10089953 |
| 245 | 2837269389 | 2837268691 | Bacteria | 7850704 |
| 246 | 2855684792 | 2855683550 | Bacteria | 7134265 |
| 247 | 2866612945 | 2866612099 | Bacteria | 7543886 |
| 248 | 2867477586 | 2867475112 | Bacteria | 6909112 |
| 249 | 2883577152 | 2883577096 | Bacteria | 4709178 |
| 250 | 2891330633 | 2891326441 | Bacteria | 6439512 |
| 251 | 2895434402 | 2895427314 | Bacteria | 13147766 |
| 252 | 2895435945 | 2895427314 | Bacteria | 13147766 |
| 253 | 2912726495 | 2912723979 | Bacteria | 8557534 |
| 254 | 2917743815 | 2917736166 | Bacteria | 9690793 |
| 255 | 2954384339 | 2954380949 | Bacteria | 10050426 |
| 256 | 2966600297 | 2966598605 | Bacteria | 7676064 |
| 257 | 2995466329 | 2995463766 | Bacteria | 8577691 |
| 258 | 2997459210 | 2997451912 | Bacteria | 8492419 |
| 259 | 2997607412 | 2997600082 | Bacteria | 9896405 |
| 260 | 8003317704 | 8003314358 | Bacteria | 10575343 |
| 261 | 8025534997 | 8025530807 | Bacteria | 8495698 |
| 262 | 8047711915 | 8047710418 | Bacteria | 11023148 |
| 263 | 8047899321 | 8047893842 | Bacteria | 11723082 |
| 264 | 8047901609 | 8047893842 | Bacteria | 11723082 |
| 265 | 8048129548 | 8048127548 | Bacteria | 11053136 |
| 266 | 8048133443 | 8048127548 | Bacteria | 11053136 |
| 267 | 8048357284 | 8048356638 | Bacteria | 11044339 |
| 268 | 8048359598 | 8048356638 | Bacteria | 11044339 |
| 269 | 8048376281 | 8048369669 | Bacteria | 11666822 |
| 270 | 8048378547 | 8048369669 | Bacteria | 11666822 |
| 271 | 8048385341 | 8048379754 | Bacteria | 11877923 |
| 272 | 8054165091 | 8054160619 | Bacteria | 7783213 |
| 273 | 8055068029 | 8055066027 | Bacteria | 9479577 |
| 274 | 8056211725 | 8056207758 | Bacteria | 8639239 |
| 275 | 8056834231 | 8056829672 | Bacteria | 9045328 |
| 276 | Ga0495583_0015535 | |||
| 277 | MRS1b_contig_9173166 | |||
| 278 | JGI24735J21928_10012239 | |||
| 279 | JGI25406J46586_10000314 | |||
| 280 | JGI25406J46586_10001208 | |||
| 281 | rootH2_10106210 | |||
| 282 | JGI25160J50197_1007703 | |||
| 283 | JGI25160J50197_1011060 | |||
| 284 | JGI25160J50197_1013182 | |||
| 285 | JGI25160J50197_1014192 | |||
| 286 | Ga0065714_10065566 | |||
| 287 | Ga0065712_10014547 | |||
| 288 | Ga0070668_100007854 | |||
| 289 | Ga0070668_100072802 | |||
| 290 | Ga0070714_100000182 | |||
| 291 | Ga0070714_100007575 | |||
| 292 | Ga0070710_10000103 | |||
| 293 | Ga0070663_100000176 | |||
| 294 | Ga0070663_100001052 | |||
| 295 | Ga0070665_100001693 | |||
| 296 | Ga0070665_100108241 | |||
| 297 | Ga0068855_100024660 | |||
| 298 | Ga0068854_100005713 | |||
| 299 | Ga0068856_100211847 | |||
| 300 | Ga0068852_100013034 | |||
| 301 | Ga0068861_100045669 | |||
| 302 | Ga0068863_100058778 | |||
| 303 | Ga0081455_10000753 | |||
| 304 | Ga0081539_10000186 | |||
| 305 | Ga0081539_10002669 | |||
| 306 | Ga0099826_10043617 | |||
| 307 | Ga0105244_10000100 | |||
| 308 | Ga0105238_10022324 | |||
| 309 | Ga0105239_10024817 | |||
| 310 | Ga0105246_10008405 | |||
| 311 | Ga0105246_10044826 | |||
| 312 | Ga0157370_10294367 | |||
| 313 | Ga0157369_10000119 | |||
| 314 | Ga0157369_10012053 | |||
| 315 | Ga0157374_10032320 | |||
| 316 | Ga0163162_10090189 | |||
| 317 | Ga0197907_10349590 | |||
| 318 | Ga0206356_10603729 | |||
| 319 | Ga0206351_10470483 | |||
| 320 | Ga0206350_10171308 | |||
| 321 | Ga0206350_10730117 | |||
| 322 | Ga0206350_11203497 | |||
| 323 | Ga0224712_10004682 | |||
| 324 | Ga0224712_10024619 | |||
| 325 | Ga0224712_10029625 | |||
| 326 | Ga0209677_100306 | |||
| 327 | Ga0207426_1000662 | |||
| 328 | Ga0207426_1001716 | |||
| 329 | Ga0207426_1001729 | |||
| 330 | Ga0207426_1002519 | |||
| 331 | Ga0207426_1003251 | |||
| 332 | Ga0207655_1000238 | |||
| 333 | Ga0207692_10000070 | |||
| 334 | Ga0207647_10033624 | |||
| 335 | Ga0207695_10025862 | |||
| 336 | Ga0207671_10000912 | |||
| 337 | Ga0207694_10001607 | |||
| 338 | Ga0207664_10000185 | |||
| 339 | Ga0207664_10020795 | |||
| 340 | Ga0207667_10021728 | |||
| 341 | Ga0207668_10034393 | |||
| 342 | Ga0207640_10010868 | |||
| 343 | Ga0207677_10099483 | |||
| 344 | Ga0207678_10000062 | |||
| 345 | Ga0207678_10000560 | |||
| 346 | Ga0207678_10042010 | |||
| 347 | Ga0207702_10020144 | |||
| 348 | Ga0207641_10033492 | |||
| 349 | Ga0207675_100024267 | |||
| 350 | Ga0207698_10038638 | |||
| 351 | Ga0268266_10044785 | |||
| 352 | Ga0268264_10010933 | |||
| 353 | Ga0307515_10091390 | |||
| 354 | Ga0307515_10098425 | |||
| 355 | Ga0307515_10114154 | |||
| 356 | Ga0307511_10000023 | |||
| 357 | Ga0307511_10000188 | |||
| 358 | Ga0307511_10000762 | |||
| 359 | Ga0307511_10049584 | |||
| 360 | Ga0307512_10015525 | |||
| 361 | Ga0307512_10017859 | |||
| 362 | Ga0307512_10036586 | |||
| 363 | Ga0307512_10055524 | |||
| 364 | Ga0307512_10083021 | |||
| 365 | Ga0307512_10099933 | |||
| 366 | Ga0316176_1214449 | |||
| 367 | Ga0307513_10002153 | |||
| 368 | Ga0307513_10073270 | |||
| 369 | Ga0307513_10133549 | |||
| 370 | Ga0307509_10022805 | |||
| 371 | Ga0307509_10102128 | |||
| 372 | Ga0307508_10001207 | |||
| 373 | Ga0307508_10045577 | |||
| 374 | Ga0307508_10115566 | |||
| 375 | Ga0307508_10139617 | |||
| 376 | Ga0307516_10015163 | |||
| 377 | Ga0307516_10109155 | |||
| 378 | Ga0307518_10000560 | |||
| 379 | Ga0307518_10000954 | |||
| 380 | Ga0307518_10052384 | |||
| 381 | Ga0307518_10162275 | |||
| 382 | Ga0307518_10191785 | |||
| 383 | Ga0307507_10061035 | |||
| 384 | Ga0307507_10172474 | |||
| 385 | Ga0307510_10108248 | |||
| 386 | Ga0307510_10115453 | |||
| 387 | Ga0373956_0000970 | |||
| 388 | Ga0373956_0001303 | |||
| 389 | Ga0395900_0031852 | |||
| 390 | Ga0451853_1348786 | |||
| 391 | Ga0439458_0002993 | |||
| 392 | Ga0466969_0000572 | |||
| 393 | Ga0466969_0013884 | |||
| 394 | Ga0466969_0017063 | |||
| 395 | Ga0466966_0002071 | |||
| 396 | Ga0466966_0004205 | |||
| 397 | Ga0466966_0079699 | |||
| 398 | Ga0466961_0001312 | |||
| 399 | Ga0466961_0004225 | |||
| 400 | Ga0466961_0006359 | |||
| 401 | Ga0466961_0010806 | |||
| 402 | Ga0466961_0074341 | |||
| 403 | Ga0466971_0000293 | |||
| 404 | Ga0466970_0009015 | |||
| 405 | Ga0466970_0018852 | |||
| 406 | Ga0466970_0020548 | |||
| 407 | Ga0466970_0026046 | |||
| 408 | Ga0466959_0001647 | |||
| 409 | Ga0466959_0004177 | |||
| 410 | Ga0466959_0077898 | |||
| 411 | Ga0466958_0049434 | |||
| 412 | Ga0466958_0081371 | |||
| 413 | Ga0495592_0029156 | |||
| 414 | Ga0495594_0091390 | |||
| 415 | Ga0495607_0013590 | |||
| 416 | Ga0495606_0015234 | |||
| 417 | Ga0495616_0024014 | |||
| 418 | Ga0495643_0010918 | |||
| 419 | Ga0495652_0000664 | |||
| 420 | Ga0495668_0001208 | |||
| 421 | Ga0495625_0080618 | |||
| 422 | Ga0495635_0001754 | |||
| 423 | Ga0495588_0096166 | |||
| 424 | Ga0495623_0031900 | |||
| 425 | Ga0495623_0039323 | |||
| 426 | Ga0495646_0010605 | |||
| 427 | Ga0495613_0007719 | |||
| 428 | Ga0495624_0087834 | |||
| 429 | Ga0495670_0012250 | |||
| 430 | Ga0495660_0004099 | |||
| 431 | Ga0495660_0053938 | |||
| 432 | Ga0495680_0081144 | |||
| 433 | Ga0495683_0000393 | |||
| 434 | Ga0495683_0000501 | |||
| 435 | Ga0495687_002699 | |||
| 436 | Ga0495687_004381 | |||
| 437 | Ga0495687_006780 | |||
| 438 | Ga0495687_008514 | |||
| 439 | Ga0495687_014034 | |||
| 440 | Ga0495687_020027 | |||
| 441 | Ga0495687_058378 | |||
| 442 | Ga0495675_0013053 | |||
| 443 | Ga0495685_000399 | |||
| 444 | Ga0495681_0077766 | |||
| 445 | Ga0495602_0146537 | |||
| 446 | Ga0496102_0202440 | |||
| 447 | Ga0496119_0000125 | |||
| 448 | Ga0501031_0001918 | |||
| 449 | Ga0501031_0050138 | |||
| 450 | Ga0501032_0001420 | |||
| 451 | Ga0501032_0081903 | |||
| 452 | Ga0501033_0000278 | |||
| 453 | Ga0501033_0002000 | |||
| 454 | Ga0501034_0001395 | |||
| 455 | Ga0501034_0005882 | |||
| 456 | Ga0501034_0013683 | |||
| 457 | Ga0501036_0000264 | |||
| 458 | Ga0501036_0000696 | |||
| 459 | Ga0501036_0021163 | |||
| 460 | Ga0501037_0000231 | |||
| 461 | Ga0501037_0012396 | |||
| 462 | Ga0501037_0146688 | |||
| 463 | Ga0501038_0013809 | |||
| 464 | Ga0501038_0024592 | |||
| 465 | Ga0501038_0070799 | |||
| 466 | Ga0501039_0002992 | |||
| 467 | Ga0501039_0012918 | |||
| 468 | Ga0501042_0004124 | |||
| 469 | Ga0501043_0000263 | |||
| 470 | Ga0501043_0002523 | |||
| 471 | Ga0501046_0004477 | |||
| 472 | Ga0501047_0000054 | |||
| 473 | Ga0501047_0004451 | |||
| 474 | Ga0501047_0055197 | |||
| 475 | Ga0501047_0056204 | |||
| 476 | Ga0501047_0166122 | |||
| 477 | Ga0501048_0000103 | |||
| 478 | Ga0501068_0046770 | |||
| 479 | Ga0501070_0002144 | |||
| 480 | Ga0501070_0011126 | |||
| 481 | Ga0501070_0015568 | |||
| 482 | Ga0501073_0010040 | |||
| 483 | Ga0501074_0006101 | |||
| 484 | Ga0501074_0038400 | |||
| 485 | Ga0501083_0068848 | |||
| 486 | Ga0501035_0000509 | |||
| 487 | Ga0501035_0008818 | |||
| 488 | Ga0501044_0016870 | |||
| 489 | Ga0501044_0048760 | |||
| 490 | Ga0501044_0049569 | |||
| 491 | nmdc:mga03n38_124909_c1 | |||
| 492 | nmdc:mga09592_341438_c1 | |||
| 493 | Ga0495601_0025238 | |||
| 494 | Ga0495612_0000574 | |||
| 495 | Ga0500578_0017382 | |||
| 496 | Ga0500644_0002866 | |||
| 497 | Ga0500560_006552 | |||
| 498 | Ga0500592_006884 | |||
| 499 | Ga0500652_005047 | |||
| 500 | Ga0500658_0008389 | |||
| 501 | Ga0500559_0022214 | |||
| 502 | Ga0500561_0005877 | |||
| 503 | Ga0500573_0012082 | |||
| 504 | Ga0500573_0081722 | |||
| 505 | Ga0500600_0034936 | |||
| 506 | Ga0500616_0038683 | |||
| 507 | Ga0500634_0026323 | |||
| 508 | Ga0501084_0000908 | |||
| 509 | Ga0466962_0000317 | |||
| 510 | 2515691921 | |||
| 511 | 2548694133 | |||
| 512 | 2586060836 | |||
| 513 | 2644263571 | |||
| 514 | 2676491064 | |||
| 515 | 2738696038 | |||
| 516 | 2786672329 | |||
| 517 | 2793977519 | |||
| 518 | 2816426478 | |||
| 519 | 2819739147 | |||
| 520 | 2837269389 | |||
| 521 | 2855684792 | |||
| 522 | 2866612945 | |||
| 523 | 2867477586 | |||
| 524 | 2883577152 | |||
| 525 | 2891330633 | |||
| 526 | 2895434402 | |||
| 527 | 2895435945 | |||
| 528 | 2912726495 | |||
| 529 | 2917743815 | |||
| 530 | 2954384339 | |||
| 531 | 2966600297 | |||
| 532 | 2995466329 | |||
| 533 | 2997459210 | |||
| 534 | 2997607412 | |||
| 535 | 8003317704 | |||
| 536 | 8025534997 | |||
| 537 | 8047711915 | |||
| 538 | 8047899321 | |||
| 539 | 8047901609 | |||
| 540 | 8048129548 | |||
| 541 | 8048133443 | |||
| 542 | 8048357284 | |||
| 543 | 8048359598 | |||
| 544 | 8048376281 | |||
| 545 | 8048378547 | |||
| 546 | 8048385341 | |||
| 547 | 8054165091 | |||
| 548 | 8055068029 | |||
| 549 | 8056211725 | |||
| 550 | 8056834231 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5foi-assembly2.cif.gz_B | crystal structure of mycinamicin viii c21 methyl hydroxylase mycci from micromonospora griseorubida bound to mycinamicin viii | 0.9569 | 19 | 412 |
| 4mm0-assembly1.cif.gz_A | crystal structure analysis of the putative thioether synthase sgvp involved in the tailoring step of griseoviridin | 0.9568 | 17 | 412 |
| 6b11-assembly2.cif.gz_B | tylhi in complex with native substrate 23-deoxy-5-o-mycaminosyl-tylonolide (23-dmtl) | 0.9561 | 19 | 412 |
| 5foi-assembly2.cif.gz_B | crystal structure of mycinamicin viii c21 methyl hydroxylase mycci from micromonospora griseorubida bound to mycinamicin viii | 0.9521 | 19 | 412 |
| 4mm0-assembly1.cif.gz_A | crystal structure analysis of the putative thioether synthase sgvp involved in the tailoring step of griseoviridin | 0.952 | 17 | 412 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4mm0A00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9568 | 17 | 412 | 1.10.630.10 |
| 4mm0A00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.952 | 17 | 412 | 1.10.630.10 |
| 6b11A00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9517 | 20 | 412 | 1.10.630.10 |
| 6f0cA00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9515 | 30 | 412 | 1.10.630.10 |
| 6f0cA00 | Mainly Alpha;Orthogonal Bundle;Cytochrome p450;Cytochrome P450 | 0.9467 | 30 | 412 | 1.10.630.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2U3CAP3-F1-model_v4 | Cytochrome P450 | 0.9914 | 23 | 412 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |
| AF-A0A2U3CAP3-F1-model_v4 | Cytochrome P450 | 0.9814 | 23 | 412 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |
| AF-A0A428WP61-F1-model_v4 | Cytochrome P450 | 0.9807 | 226 | 412 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |
| AF-A0A3A8H4L1-F1-model_v4 | Cytochrome P450 | 0.9805 | 20 | 412 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |
| AF-A0A1H0S0T0-F1-model_v4 | Cytochrome P450 | 0.9756 | 233 | 412 |
GO:0004497
GO:0005506 GO:0016705 GO:0020037 |