F381794

General Info

Members Datasets Scaffolds Average Seq Length
277 180 264 416

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10002616|Ga0157380_100026167
Length 451
Sequence MTSQPKNDPVRPQPVSANGPGPGGRRPNGRSMESFGKVTTCSFCGKTSREVGPMVEGPNDIYICSNCTDLCQNIFRQERRRVSSARPLFSAIPSPRQISEFLGQYVIGQTHAKKALSVAVHNHYKRLTQIENEDAPVELDKSNVLLIGPTGTGKTLLAKTLARVLNVPFAIGDATTLTEAGYVGEDVENLLLKLLQGADYDLEAAQRGIIYIDEIDKIGKTSQNVSITRDVSGEGVQQSLLKMLEGTVCNVPPQGGRKHPEQQYIQMDTTHILFICGGSFVGIDDIIGKRLGKKRIGFNSEPVSDATDRQKSADLLAQITPEDVLQFGLIPELVGRLPILCPLMPLTRDAMIQILTEPKNALIKQYQHLFTLENCKLEFTQSALEVLAERAMKRDTGARALRAVLDDVMLDMMYELPERDNAGVTYILDADAIESKLSLSELPQRLATKSA

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
3 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
4 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
5 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
6 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
7 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
8 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
9 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
10 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
11 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
12 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
57 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
84 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
85 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
86 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
89 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
90 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
91 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
92 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
93 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
94 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
95 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
96 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
97 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
98 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
99 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
100 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
101 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
103 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
104 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
105 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
109 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
116 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
117 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
118 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
119 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
120 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
121 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
124 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
125 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
126 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
127 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
131 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
134 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
135 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
136 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
137 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
138 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
139 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
140 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
141 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
142 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
143 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
144 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
145 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
146 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
165 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
166 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
167 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
168 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
169 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
170 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
171 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
176 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
177 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
178 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
180 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.5
Metatranscriptomes 1.81
Isolates 4.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.17
Nodule 0
Rhizoplane 0.72
Rhizosphere 93.86
Stem 0
Stem Tuber 0
Unclassified 3.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1001437 3300003781 Bacteria 14360
2 Ga0065165_1003274 3300005262 Bacteria 11681
3 Ga0065712_10079936 3300005290 Bacteria 3163
4 Ga0065707_10022359 3300005295 Bacteria 1730
5 Ga0070670_100028524 3300005331 Bacteria 4804
6 Ga0070689_100011453 3300005340 Bacteria 6354
7 Ga0070687_100001283 3300005343 Bacteria 8759
8 Ga0070673_100105932 3300005364 Bacteria 2324
9 Ga0070711_100006035 3300005439 Bacteria 7273
10 Ga0070700_100029031 3300005441 Bacteria 3295
11 Ga0070694_100049463 3300005444 Bacteria 2832
12 Ga0070678_100059326 3300005456 Bacteria 2812
13 Ga0070685_10001194 3300005466 Bacteria 13880
14 Ga0070685_10012558 3300005466 Bacteria 4452
15 Ga0070706_100072286 3300005467 Bacteria 3192
16 Ga0070707_100106019 3300005468 Bacteria 2725
17 Ga0070707_100132248 3300005468 Bacteria 2426
18 Ga0070698_100029359 3300005471 Bacteria 5709
19 Ga0070698_100092898 3300005471 Bacteria 2998
20 Ga0070698_100104467 3300005471 Bacteria 2803
21 Ga0070698_100191601 3300005471 Bacteria 1982
22 Ga0070697_100038858 3300005536 Bacteria 3846
23 Ga0068853_100004581 3300005539 Bacteria 10722
24 Ga0070695_100015881 3300005545 Bacteria 4550
25 Ga0070695_100053031 3300005545 Bacteria 2608
26 Ga0070695_100079268 3300005545 Bacteria 2167
27 Ga0070695_100139036 3300005545 Bacteria 1682
28 Ga0070665_100001228 3300005548 Bacteria 31105
29 Ga0070704_100002120 3300005549 Bacteria 11037
30 Ga0070704_100190368 3300005549 Bacteria 1649
31 Ga0068859_100025834 3300005617 Bacteria 5892
32 Ga0068859_100283458 3300005617 Bacteria 1750
33 Ga0068864_100014295 3300005618 Bacteria 6593
34 Ga0068851_10000149 3300005834 Bacteria 37522
35 Ga0068870_10118335 3300005840 Bacteria 1523
36 Ga0068858_100003699 3300005842 Bacteria 15148
37 Ga0068858_100274147 3300005842 Bacteria 1606
38 Ga0075366_10004860 3300006195 Bacteria 7252
39 Ga0075428_100002733 3300006844 Bacteria 19195
40 Ga0075428_100004725 3300006844 Bacteria 15077
41 Ga0075428_100012496 3300006844 Bacteria 9444
42 Ga0075428_100055438 3300006844 Bacteria 4342
43 Ga0075431_100019667 3300006847 Bacteria 6889
44 Ga0075431_100046641 3300006847 Bacteria 4469
45 Ga0075433_10000259 3300006852 Bacteria 30829
46 Ga0075433_10015873 3300006852 Bacteria 6192
47 Ga0075433_10023762 3300006852 Bacteria 5162
48 Ga0075433_10031619 3300006852 Bacteria 4525
49 Ga0075434_100000218 3300006871 Bacteria 39472
50 Ga0075434_100022134 3300006871 Bacteria 6190
51 Ga0075434_100070785 3300006871 Bacteria 3478
52 Ga0075429_100000591 3300006880 Bacteria 27922
53 Ga0075429_100022899 3300006880 Bacteria 5416
54 Ga0075429_100042932 3300006880 Bacteria 3934
55 Ga0075436_100159876 3300006914 Bacteria 1588
56 Ga0097620_100025834 3300006931 Bacteria 5892
57 Ga0097620_100283451 3300006931 Bacteria 1750
58 Ga0075435_100000468 3300007076 Bacteria 24686
59 Ga0075435_100007496 3300007076 Bacteria 7783
60 Ga0105251_10005343 3300009011 Bacteria 8432
61 Ga0111539_10001851 3300009094 Bacteria 28134
62 Ga0111539_10004682 3300009094 Bacteria 17880
63 Ga0111539_10163766 3300009094 Bacteria 2601
64 Ga0105247_10033833 3300009101 Bacteria 3111
65 Ga0114129_10022559 3300009147 Bacteria 8931
66 Ga0114129_10026695 3300009147 Bacteria 8180
67 Ga0114129_10122787 3300009147 Bacteria 3573
68 Ga0105243_10000012 3300009148 Bacteria 300885
69 Ga0105248_10101603 3300009177 Bacteria 3241
70 Ga0105238_10000364 3300009551 Bacteria 48625
71 Ga0105239_10110734 3300010375 Bacteria 3043
72 Ga0157378_10101326 3300013297 Bacteria 2630
73 Ga0157372_10028963 3300013307 Bacteria 6043
74 Ga0163163_10062919 3300014325 Bacteria 3678
75 Ga0157380_10002616 3300014326 Bacteria 12178
76 Ga0209676_1001811 3300025292 Bacteria 17861
77 Ga0207656_10001034 3300025321 Bacteria 9083
78 Ga0207710_10024692 3300025900 Bacteria 2591
79 Ga0207643_10129137 3300025908 Bacteria 1502
80 Ga0207684_10010651 3300025910 Bacteria 8078
81 Ga0207684_10014924 3300025910 Bacteria 6686
82 Ga0207663_10010094 3300025916 Bacteria 5009
83 Ga0207662_10001469 3300025918 Bacteria 11450
84 Ga0207646_10021729 3300025922 Bacteria 5924
85 Ga0207646_10060750 3300025922 Bacteria 3374
86 Ga0207646_10127242 3300025922 Bacteria 2291
87 Ga0207694_10001552 3300025924 Bacteria 19486
88 Ga0207650_10003086 3300025925 Bacteria 11471
89 Ga0207709_10000006 3300025935 Bacteria 800946
90 Ga0207670_10036247 3300025936 Bacteria 3206
91 Ga0207711_10025824 3300025941 Bacteria 4926
92 Ga0207711_10072691 3300025941 Bacteria 2988
93 Ga0207703_10002523 3300026035 Bacteria 15820
94 Ga0207639_10020290 3300026041 Bacteria 4755
95 Ga0207708_10209616 3300026075 Bacteria 1557
96 Ga0207641_10066055 3300026088 Bacteria 3096
97 Ga0207648_10029840 3300026089 Bacteria 4836
98 Ga0207676_10059613 3300026095 Bacteria 3015
99 Ga0207675_100080471 3300026118 Bacteria 3054
100 Ga0207683_10046657 3300026121 Bacteria 3793
101 Ga0207428_10015078 3300027907 Bacteria 6693
102 Ga0207428_10017709 3300027907 Bacteria 6110
103 Ga0207428_10030004 3300027907 Bacteria 4498
104 Ga0268266_10007562 3300028379 Bacteria 9785
105 Ga0268266_10031170 3300028379 Bacteria 4527
106 Ga0265337_1001717 3300028556 Bacteria 10598
107 Ga0265326_10000161 3300028558 Bacteria 35422
108 Ga0265319_1010696 3300028563 Bacteria 3814
109 Ga0265323_10000001 3300028653 Bacteria 442908
110 Ga0265338_10000010 3300028800 Bacteria 443068
111 Ga0265338_10013549 3300028800 Bacteria 9191
112 Ga0265338_10025794 3300028800 Bacteria 5950
113 Ga0265325_10000351 3300031241 Bacteria 32491
114 Ga0265339_10000211 3300031249 Bacteria 47974
115 Ga0265331_10000311 3300031250 Bacteria 53260
116 Ga0265327_10018215 3300031251 Bacteria 4363
117 Ga0265313_10000323 3300031595 Bacteria 52193
118 Ga0316575_10016400 3300031665 Bacteria 2804
119 Ga0265314_10000161 3300031711 Bacteria 101910
120 Ga0265314_10000622 3300031711 Bacteria 43670
121 Ga0265342_10000172 3300031712 Bacteria 71681
122 Ga0265342_10011983 3300031712 Bacteria 5892
123 Ga0316576_10036405 3300031727 Bacteria 3519
124 Ga0316578_10000926 3300031728 Bacteria 11117
125 Ga0316578_10126279 3300031728 Bacteria 1538
126 Ga0316577_10035983 3300031733 Bacteria 2767
127 Ga0307414_10000199 3300032004 Bacteria 40460
128 Ga0307414_10026732 3300032004 Bacteria 3718
129 Ga0373934_0015058 3300035086 Bacteria 2932
130 Ga0373936_0025484 3300035113 Bacteria 2313
131 Ga0373953_0010216 3300035117 Bacteria 3257
132 Ga0373956_0009394 3300035119 Bacteria 3979
133 Ga0373955_0026999 3300035172 Bacteria 2963
134 Ga0373924_0035231 3300035410 Bacteria 2029
135 Ga0373933_0004951 3300035724 Bacteria 7262
136 Ga0373937_0010559 3300036401 Bacteria 8066
137 Ga0316584_0001367 3300036712 Bacteria 14515
138 Ga0439434_0013443 3300042435 Bacteria 2431
139 Ga0451577_0003292 3300042876 Bacteria 18170
140 Ga0451577_0008916 3300042876 Bacteria 9708
141 Ga0451577_0060329 3300042876 Bacteria 3381
142 Ga0453683_0079560 3300044673 Bacteria 2053
143 Ga0453683_0124741 3300044673 Bacteria 1621
144 Ga0453684_0000141 3300044712 Bacteria 316572
145 Ga0453684_0001647 3300044712 Bacteria 60658
146 Ga0453684_0003191 3300044712 Bacteria 37570
147 Ga0453684_0081147 3300044712 Bacteria 4046
148 Ga0453684_0132307 3300044712 Bacteria 2992
149 Ga0451576_0007887 3300045051 Bacteria 12613
150 Ga0451576_0011517 3300045051 Bacteria 10040
151 Ga0451576_0014636 3300045051 Bacteria 8719
152 Ga0451576_0024952 3300045051 Bacteria 6449
153 Ga0451576_0049599 3300045051 Bacteria 4405
154 Ga0451576_0060046 3300045051 Bacteria 3967
155 Ga0451576_0068222 3300045051 Bacteria 3701
156 Ga0495592_0026436 3300046454 Bacteria 4400
157 Ga0495590_0001281 3300046457 Bacteria 10946
158 Ga0495641_0000006 3300046461 Bacteria 198669
159 Ga0495651_0036006 3300046462 Bacteria 3852
160 Ga0495653_0000001 3300046463 Bacteria 720352
161 Ga0495664_0001495 3300046477 Bacteria 12382
162 Ga0495618_0001271 3300046514 Bacteria 17095
163 Ga0495628_0016184 3300046516 Bacteria 6222
164 Ga0495628_0052126 3300046516 Bacteria 3233
165 Ga0495648_0000298 3300046524 Bacteria 55183
166 Ga0495648_0000788 3300046524 Bacteria 33759
167 Ga0495648_0001452 3300046524 Bacteria 23184
168 Ga0495652_0090897 3300046529 Bacteria 2497
169 Ga0495586_0019087 3300046535 Bacteria 3649
170 Ga0495587_0009105 3300046536 Bacteria 6371
171 Ga0495659_0000901 3300046664 Bacteria 10547
172 Ga0495599_0045200 3300046678 Bacteria 2761
173 Ga0495624_0009605 3300046690 Bacteria 6698
174 Ga0495649_0000004 3300046694 Bacteria 699364
175 Ga0495649_0000005 3300046694 Bacteria 634408
176 Ga0495600_0043537 3300046809 Bacteria 2928
177 Ga0495672_0000007 3300047320 Bacteria 578827
178 Ga0495672_0000017 3300047320 Bacteria 454975
179 Ga0495676_0002037 3300047321 Unclassified 17784
180 Ga0495676_0134840 3300047321 Bacteria 1777
181 Ga0495683_0001207 3300047323 Bacteria 17628
182 Ga0495675_0001224 3300047444 Bacteria 15544
183 Ga0495673_0000122 3300047469 Bacteria 144500
184 Ga0495673_0011650 3300047469 Bacteria 4717
185 Ga0495686_0019663 3300047472 Bacteria 4510
186 Ga0495602_0111789 3300048088 Bacteria 2218
187 Ga0496104_0178334 3300048907 Bacteria 2035
188 Ga0496104_0232642 3300048907 Bacteria 1755
189 Ga0496116_0001943 3300048919 Bacteria 22262
190 Ga0496117_0003199 3300048920 Bacteria 19389
191 Ga0496118_0012834 3300048921 Bacteria 7995
192 Ga0496122_0002475 3300048925 Bacteria 26106
193 Ga0496123_0010642 3300048926 Bacteria 8095
194 Ga0496126_0210964 3300048929 Bacteria 1635
195 Ga0495682_0000002 3300049460 Bacteria 595732
196 Ga0495682_0000045 3300049460 Bacteria 114441
197 Ga0501033_0024692 3300049570 Bacteria 4532
198 Ga0501034_0000341 3300049571 Bacteria 81139
199 Ga0501034_0000418 3300049571 Bacteria 71416
200 Ga0501034_0001915 3300049571 Bacteria 26334
201 Ga0501034_0019801 3300049571 Bacteria 6877
202 Ga0501034_0059366 3300049571 Bacteria 3842
203 Ga0501036_0127836 3300049572 Bacteria 2146
204 Ga0501037_0013298 3300049573 Bacteria 6065
205 Ga0501038_0000100 3300049574 Bacteria 73168
206 Ga0501043_0005663 3300049579 Bacteria 10067
207 Ga0501043_0007029 3300049579 Bacteria 8958
208 Ga0501046_0000077 3300049580 Bacteria 103098
209 Ga0501046_0015003 3300049580 Bacteria 6517
210 Ga0501046_0042068 3300049580 Bacteria 3643
211 Ga0501047_0005734 3300049581 Bacteria 11687
212 Ga0501047_0083445 3300049581 Bacteria 3071
213 Ga0501048_0003951 3300049582 Bacteria 11268
214 Ga0501073_0000961 3300049589 Bacteria 20745
215 Ga0501075_0183918 3300049591 Bacteria 1594
216 Ga0501080_0019512 3300049742 Bacteria 6280
217 Ga0501081_0108795 3300049743 Bacteria 1966
218 Ga0501083_0000038 3300049744 Bacteria 93852
219 Ga0501083_0005136 3300049744 Bacteria 9267
220 Ga0501083_0150404 3300049744 Bacteria 1524
221 Ga0501044_0006332 3300049823 Bacteria 13088
222 Ga0501044_0021376 3300049823 Bacteria 6905
223 Ga0501044_0063019 3300049823 Bacteria 3789
224 Ga0501044_0255835 3300049823 Bacteria 1691
225 nmdc:mga0k408_4072_c1 3300050493 Bacteria 7760
226 nmdc:mga05p37_1681_c1 3300050507 Bacteria 25737
227 nmdc:mga05p37_250525_c1 3300050507 Bacteria 2124
228 nmdc:mga05p37_287981_c1 3300050507 Bacteria 1956
229 nmdc:mga05p37_352161_c1 3300050507 Bacteria 1733
230 nmdc:mga05p37_38996_c1 3300050507 Bacteria 5828
231 nmdc:mga09592_189_c1 3300050508 Bacteria 44125
232 nmdc:mga06r32_273671_c1 3300050510 Bacteria 1676
233 nmdc:mga06r32_53328_c1 3300050510 Bacteria 3874
234 nmdc:mga08y16_118232_c2 3300050511 Bacteria 2574
235 nmdc:mga08y16_24361_c1 3300050511 Bacteria 6388
236 nmdc:mga08y16_25021_c1 3300050511 Bacteria 6298
237 nmdc:mga08y16_343623_c1 3300050511 Bacteria 1534
238 nmdc:mga0n895_106240_c1 3300050512 Bacteria 2820
239 nmdc:mga0n895_21997_c1 3300050512 Bacteria 5974
240 nmdc:mga0n895_31761_c1 3300050512 Bacteria 5060
241 nmdc:mga0n895_42_c1 3300050512 Bacteria 74935
242 nmdc:mga0n895_4854_c1 3300050512 Bacteria 11144
243 nmdc:mga0rr50_177900_c1 3300050513 Bacteria 1737
244 nmdc:mga0rr50_192058_c1 3300050513 Bacteria 1674
245 nmdc:mga08x19_1327_c1 3300050514 Bacteria 15341
246 nmdc:mga08x19_145569_c1 3300050514 Bacteria 1602
247 nmdc:mga08x19_212967_c1 3300050514 Bacteria 1326
248 nmdc:mga0a205_14544_c1 3300050515 Bacteria 7342
249 nmdc:mga0a205_22533_c1 3300050515 Bacteria 5968
250 nmdc:mga0a205_57_c1 3300050515 Bacteria 61006
251 nmdc:mga0a205_82259_c1 3300050515 Bacteria 3110
252 nmdc:mga0a205_93563_c1 3300050515 Bacteria 2904
253 Ga0495601_0119909 3300053077 Bacteria 1708
254 Ga0495595_0002045 3300053084 Bacteria 7844
255 Ga0495619_0021878 3300053085 Bacteria 4086
256 Ga0500622_0000768 3300053156 Bacteria 27944
257 Ga0501084_0026952 3300054114 Bacteria 4801
258 Ga0501084_0079298 3300054114 Bacteria 2752
259 Ga0587084_001705 3300059477 Bacteria 2140
260 Ga0587085_001570 3300059506 Bacteria 2146
261 Ga0587090_003473 3300059510 Bacteria 1835
262 Ga0587090_008176 3300059510 Bacteria 1396
263 Ga0587072_003654 3300059643 Bacteria 2181
264 Ga0501082_0076146 3300060353 Bacteria 2892

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046457 Ga0495590_0001281 Ga0495590_0001281_9288_10424 365
2 3300046463 Ga0495653_0000001 Ga0495653_0000001_267545_268681 365
3 3300046524 Ga0495648_0000298 Ga0495648_0000298_13534_14670 365
4 3300046524 Ga0495648_0001452 Ga0495648_0001452_16347_17483 365
5 3300046694 Ga0495649_0000005 Ga0495649_0000005_3983_5119 365
6 3300047320 Ga0495672_0000007 Ga0495672_0000007_90817_91953 365
7 3300047320 Ga0495672_0000017 Ga0495672_0000017_371794_372930 365
8 3300047323 Ga0495683_0001207 Ga0495683_0001207_16391_17527 365
9 3300047469 Ga0495673_0000122 Ga0495673_0000122_60161_61297 365
10 3300047472 Ga0495686_0019663 Ga0495686_0019663_894_2030 365
11 3300049460 Ga0495682_0000002 Ga0495682_0000002_448564_449700 365
12 3300050507 nmdc:mga05p37_250525_c1 nmdc:mga05p37_250525_c1_964_2109 367
13 3300050513 nmdc:mga0rr50_177900_c1 nmdc:mga0rr50_177900_c1_11_1183 373
14 3300005439 Ga0070711_100006035 Ga0070711_1000060355 376
15 3300025916 Ga0207663_10010094 Ga0207663_100100942 376
16 3300049744 Ga0501083_0150404 Ga0501083_0150404_56_1306 377
17 3300046477 Ga0495664_0001495 Ga0495664_0001495_4913_6118 378
18 3300046690 Ga0495624_0009605 Ga0495624_0009605_4617_5822 378
19 3300047321 Ga0495676_0002037 Ga0495676_0002037_4483_5688 378
20 3300009147 Ga0114129_10122787 Ga0114129_101227874 379
21 3300025935 Ga0207709_10000006 Ga0207709_10000006691 379
22 3300031665 Ga0316575_10016400 Ga0316575_100164003 379
23 3300048929 Ga0496126_0210964 Ga0496126_0210964_371_1555 379
24 3300049579 Ga0501043_0005663 Ga0501043_0005663_1725_2930 379
25 3300006195 Ga0075366_10004860 Ga0075366_100048605 380
26 3300046524 Ga0495648_0000788 Ga0495648_0000788_22162_23358 381
27 3300049460 Ga0495682_0000045 Ga0495682_0000045_94316_95512 381
28 3300046694 Ga0495649_0000004 Ga0495649_0000004_177797_179002 382
29 3300053077 Ga0495601_0119909 Ga0495601_0119909_366_1556 382
30 3300009011 Ga0105251_10005343 Ga0105251_100053437 384
31 3300047469 Ga0495673_0011650 Ga0495673_0011650_3323_4567 384
32 3300049743 Ga0501081_0108795 Ga0501081_0108795_530_1798 389
33 3300005834 Ga0068851_10000149 Ga0068851_100001494 391
34 3300025321 Ga0207656_10001034 Ga0207656_100010345 391
35 3300042435 Ga0439434_0013443 Ga0439434_0013443_718_1995 391
36 3300005539 Ga0068853_100004581 Ga0068853_1000045813 392
37 3300026041 Ga0207639_10020290 Ga0207639_100202903 392
38 iso_pu_bacteria 2884634485 2884636991 392
39 iso_pu_bacteria 2919692658 2919695494 392
40 3300031251 Ga0265327_10018215 Ga0265327_100182153 394
41 3300048907 Ga0496104_0178334 Ga0496104_0178334_95_1381 394
42 iso_pu_bacteria 2522125168 2522549642 394
43 iso_pu_bacteria 2687453341 2688393608 394
44 iso_pu_bacteria 2721755487 2722729293 394
45 iso_pu_bacteria 2873314349 2873319757 394
46 iso_pu_bacteria 2896317667 2896318671 394
47 iso_pu_bacteria 2896344016 2896345473 394
48 iso_pu_bacteria 2904780799 2904780968 394
49 iso_pu_bacteria 2911138879 2911142611 394
50 iso_pu_bacteria 2919177583 2919180568 394
51 iso_pu_bacteria 3003233435 3003236866 394
52 iso_pu_bacteria 8055588893 8055591775 394
53 3300005471 Ga0070698_100191601 Ga0070698_1001916011 395
54 3300009101 Ga0105247_10033833 Ga0105247_100338333 395
55 3300010375 Ga0105239_10110734 Ga0105239_101107342 395
56 3300028556 Ga0265337_1001717 Ga0265337_100171715 395
57 3300028558 Ga0265326_10000161 Ga0265326_1000016123 395
58 3300028563 Ga0265319_1010696 Ga0265319_10106966 395
59 3300028653 Ga0265323_10000001 Ga0265323_1000000161 395
60 3300028800 Ga0265338_10000010 Ga0265338_10000010591 395
61 3300031712 Ga0265342_10000172 Ga0265342_1000017232 395
62 3300046461 Ga0495641_0000006 Ga0495641_0000006_152189_153445 395
63 3300048088 Ga0495602_0111789 Ga0495602_0111789_645_1943 395
64 3300048907 Ga0496104_0232642 Ga0496104_0232642_394_1674 395
65 3300006844 Ga0075428_100004725 Ga0075428_1000047259 396
66 3300009148 Ga0105243_10000012 Ga0105243_1000001252 396
67 3300013307 Ga0157372_10028963 Ga0157372_100289633 396
68 3300025900 Ga0207710_10024692 Ga0207710_100246922 396
69 3300031728 Ga0316578_10126279 Ga0316578_101262791 396
70 3300032004 Ga0307414_10000199 Ga0307414_1000019925 396
71 3300032004 Ga0307414_10026732 Ga0307414_100267323 396
72 3300042876 Ga0451577_0003292 Ga0451577_0003292_10875_12098 396
73 3300044712 Ga0453684_0000141 Ga0453684_0000141_194590_195831 396
74 3300044712 Ga0453684_0003191 Ga0453684_0003191_25558_26781 396
75 3300044712 Ga0453684_0081147 Ga0453684_0081147_2725_3966 396
76 3300048919 Ga0496116_0001943 Ga0496116_0001943_6060_7310 396
77 3300048920 Ga0496117_0003199 Ga0496117_0003199_15996_17246 396
78 3300048921 Ga0496118_0012834 Ga0496118_0012834_1171_2421 396
79 3300048925 Ga0496122_0002475 Ga0496122_0002475_11505_12755 396
80 3300048926 Ga0496123_0010642 Ga0496123_0010642_980_2230 396
81 3300049571 Ga0501034_0001915 Ga0501034_0001915_1387_2667 396
82 3300054114 Ga0501084_0079298 Ga0501084_0079298_701_1981 396
83 3300059477 Ga0587084_001705 Ga0587084_001705_54_1334 396
84 3300059506 Ga0587085_001570 Ga0587085_001570_60_1340 396
85 3300059510 Ga0587090_003473 Ga0587090_003473_54_1334 396
86 3300059643 Ga0587072_003654 Ga0587072_003654_788_2068 396
87 3300005548 Ga0070665_100001228 Ga0070665_1000012287 397
88 3300006844 Ga0075428_100055438 Ga0075428_1000554385 397
89 3300009551 Ga0105238_10000364 Ga0105238_1000036428 397
90 3300014326 Ga0157380_10002616 Ga0157380_100026167 397
91 3300025924 Ga0207694_10001552 Ga0207694_100015525 397
92 3300028379 Ga0268266_10007562 Ga0268266_100075621 397
93 3300028379 Ga0268266_10031170 Ga0268266_100311705 397
94 3300028800 Ga0265338_10013549 Ga0265338_100135492 397
95 3300028800 Ga0265338_10025794 Ga0265338_100257943 397
96 3300031241 Ga0265325_10000351 Ga0265325_1000035110 397
97 3300031249 Ga0265339_10000211 Ga0265339_1000021126 397
98 3300031250 Ga0265331_10000311 Ga0265331_1000031132 397
99 3300031595 Ga0265313_10000323 Ga0265313_1000032310 397
100 3300031711 Ga0265314_10000161 Ga0265314_1000016148 397
101 3300031711 Ga0265314_10000622 Ga0265314_1000062213 397
102 3300031712 Ga0265342_10011983 Ga0265342_100119833 397
103 3300042876 Ga0451577_0060329 Ga0451577_0060329_56_1309 397
104 3300044712 Ga0453684_0001647 Ga0453684_0001647_7514_8767 397
105 3300045051 Ga0451576_0014636 Ga0451576_0014636_137_1390 397
106 3300049570 Ga0501033_0024692 Ga0501033_0024692_1044_2396 397
107 3300049571 Ga0501034_0000341 Ga0501034_0000341_78642_79994 397
108 3300049571 Ga0501034_0000418 Ga0501034_0000418_68467_69843 397
109 3300049571 Ga0501034_0019801 Ga0501034_0019801_4344_5654 397
110 3300049571 Ga0501034_0059366 Ga0501034_0059366_1658_2953 397
111 3300049572 Ga0501036_0127836 Ga0501036_0127836_218_1504 397
112 3300049573 Ga0501037_0013298 Ga0501037_0013298_778_2130 397
113 3300049574 Ga0501038_0000100 Ga0501038_0000100_40243_41595 397
114 3300049579 Ga0501043_0007029 Ga0501043_0007029_995_2284 397
115 3300049580 Ga0501046_0000077 Ga0501046_0000077_66000_67385 397
116 3300049580 Ga0501046_0015003 Ga0501046_0015003_1257_2546 397
117 3300049580 Ga0501046_0042068 Ga0501046_0042068_418_1704 397
118 3300049581 Ga0501047_0005734 Ga0501047_0005734_8938_10224 397
119 3300049581 Ga0501047_0083445 Ga0501047_0083445_281_1570 397
120 3300049582 Ga0501048_0003951 Ga0501048_0003951_3644_5029 397
121 3300049589 Ga0501073_0000961 Ga0501073_0000961_2058_3419 397
122 3300049591 Ga0501075_0183918 Ga0501075_0183918_53_1336 397
123 3300049742 Ga0501080_0019512 Ga0501080_0019512_4605_5975 397
124 3300049744 Ga0501083_0000038 Ga0501083_0000038_90833_92218 397
125 3300049744 Ga0501083_0005136 Ga0501083_0005136_4111_5481 397
126 3300049823 Ga0501044_0006332 Ga0501044_0006332_2761_4113 397
127 3300049823 Ga0501044_0021376 Ga0501044_0021376_4377_5663 397
128 3300049823 Ga0501044_0063019 Ga0501044_0063019_2222_3607 397
129 3300049823 Ga0501044_0255835 Ga0501044_0255835_97_1449 397
130 3300050493 nmdc:mga0k408_4072_c1 nmdc:mga0k408_4072_c1_5321_6562 397
131 3300053156 Ga0500622_0000768 Ga0500622_0000768_2894_4135 397
132 3300054114 Ga0501084_0026952 Ga0501084_0026952_3131_4492 397
133 3300060353 Ga0501082_0076146 Ga0501082_0076146_90_1475 397
134 3300003781 Ga0055536_1001437 Ga0055536_100143711 398
135 3300005262 Ga0065165_1003274 Ga0065165_10032747 398
136 3300005290 Ga0065712_10079936 Ga0065712_100799362 398
137 3300005295 Ga0065707_10022359 Ga0065707_100223592 398
138 3300005331 Ga0070670_100028524 Ga0070670_1000285244 398
139 3300005340 Ga0070689_100011453 Ga0070689_1000114535 398
140 3300005343 Ga0070687_100001283 Ga0070687_1000012832 398
141 3300005364 Ga0070673_100105932 Ga0070673_1001059321 398
142 3300005441 Ga0070700_100029031 Ga0070700_1000290313 398
143 3300005444 Ga0070694_100049463 Ga0070694_1000494631 398
144 3300005456 Ga0070678_100059326 Ga0070678_1000593262 398
145 3300005466 Ga0070685_10001194 Ga0070685_100011947 398
146 3300005466 Ga0070685_10012558 Ga0070685_100125582 398
147 3300005467 Ga0070706_100072286 Ga0070706_1000722862 398
148 3300005468 Ga0070707_100106019 Ga0070707_1001060193 398
149 3300005468 Ga0070707_100132248 Ga0070707_1001322482 398
150 3300005471 Ga0070698_100029359 Ga0070698_1000293592 398
151 3300005471 Ga0070698_100092898 Ga0070698_1000928982 398
152 3300005471 Ga0070698_100104467 Ga0070698_1001044672 398
153 3300005536 Ga0070697_100038858 Ga0070697_1000388582 398
154 3300005545 Ga0070695_100015881 Ga0070695_1000158812 398
155 3300005545 Ga0070695_100053031 Ga0070695_1000530312 398
156 3300005545 Ga0070695_100079268 Ga0070695_1000792682 398
157 3300005545 Ga0070695_100139036 Ga0070695_1001390361 398
158 3300005549 Ga0070704_100002120 Ga0070704_1000021202 398
159 3300005549 Ga0070704_100190368 Ga0070704_1001903681 398
160 3300005617 Ga0068859_100025834 Ga0068859_1000258342 398
161 3300005617 Ga0068859_100283458 Ga0068859_1002834582 398
162 3300005618 Ga0068864_100014295 Ga0068864_1000142953 398
163 3300005840 Ga0068870_10118335 Ga0068870_101183352 398
164 3300005842 Ga0068858_100003699 Ga0068858_10000369912 398
165 3300005842 Ga0068858_100274147 Ga0068858_1002741472 398
166 3300006844 Ga0075428_100002733 Ga0075428_1000027335 398
167 3300006844 Ga0075428_100012496 Ga0075428_1000124967 398
168 3300006847 Ga0075431_100019667 Ga0075431_1000196677 398
169 3300006847 Ga0075431_100046641 Ga0075431_1000466413 398
170 3300006852 Ga0075433_10000259 Ga0075433_1000025924 398
171 3300006852 Ga0075433_10015873 Ga0075433_100158733 398
172 3300006852 Ga0075433_10023762 Ga0075433_100237625 398
173 3300006852 Ga0075433_10031619 Ga0075433_100316192 398
174 3300006871 Ga0075434_100000218 Ga0075434_10000021814 398
175 3300006871 Ga0075434_100022134 Ga0075434_1000221346 398
176 3300006871 Ga0075434_100070785 Ga0075434_1000707852 398
177 3300006880 Ga0075429_100000591 Ga0075429_10000059115 398
178 3300006880 Ga0075429_100022899 Ga0075429_1000228992 398
179 3300006880 Ga0075429_100042932 Ga0075429_1000429322 398
180 3300006914 Ga0075436_100159876 Ga0075436_1001598762 398
181 3300006931 Ga0097620_100025834 Ga0097620_1000258342 398
182 3300006931 Ga0097620_100283451 Ga0097620_1002834512 398
183 3300007076 Ga0075435_100000468 Ga0075435_10000046812 398
184 3300007076 Ga0075435_100007496 Ga0075435_1000074962 398
185 3300009094 Ga0111539_10001851 Ga0111539_1000185110 398
186 3300009094 Ga0111539_10004682 Ga0111539_100046828 398
187 3300009094 Ga0111539_10163766 Ga0111539_101637662 398
188 3300009147 Ga0114129_10022559 Ga0114129_100225599 398
189 3300009147 Ga0114129_10026695 Ga0114129_100266956 398
190 3300009177 Ga0105248_10101603 Ga0105248_101016032 398
191 3300013297 Ga0157378_10101326 Ga0157378_101013262 398
192 3300014325 Ga0163163_10062919 Ga0163163_100629193 398
193 3300025292 Ga0209676_1001811 Ga0209676_10018116 398
194 3300025908 Ga0207643_10129137 Ga0207643_101291372 398
195 3300025910 Ga0207684_10010651 Ga0207684_100106516 398
196 3300025910 Ga0207684_10014924 Ga0207684_100149243 398
197 3300025918 Ga0207662_10001469 Ga0207662_100014692 398
198 3300025922 Ga0207646_10021729 Ga0207646_100217293 398
199 3300025922 Ga0207646_10060750 Ga0207646_100607502 398
200 3300025922 Ga0207646_10127242 Ga0207646_101272422 398
201 3300025925 Ga0207650_10003086 Ga0207650_100030862 398
202 3300025936 Ga0207670_10036247 Ga0207670_100362472 398
203 3300025941 Ga0207711_10025824 Ga0207711_100258242 398
204 3300025941 Ga0207711_10072691 Ga0207711_100726913 398
205 3300026035 Ga0207703_10002523 Ga0207703_100025239 398
206 3300026075 Ga0207708_10209616 Ga0207708_102096162 398
207 3300026088 Ga0207641_10066055 Ga0207641_100660552 398
208 3300026089 Ga0207648_10029840 Ga0207648_100298403 398
209 3300026095 Ga0207676_10059613 Ga0207676_100596133 398
210 3300026118 Ga0207675_100080471 Ga0207675_1000804713 398
211 3300026121 Ga0207683_10046657 Ga0207683_100466572 398
212 3300027907 Ga0207428_10015078 Ga0207428_100150784 398
213 3300027907 Ga0207428_10017709 Ga0207428_100177092 398
214 3300027907 Ga0207428_10030004 Ga0207428_100300042 398
215 3300031727 Ga0316576_10036405 Ga0316576_100364052 398
216 3300031728 Ga0316578_10000926 Ga0316578_100009264 398
217 3300031733 Ga0316577_10035983 Ga0316577_100359832 398
218 3300035086 Ga0373934_0015058 Ga0373934_0015058_654_1913 398
219 3300035113 Ga0373936_0025484 Ga0373936_0025484_581_1840 398
220 3300035117 Ga0373953_0010216 Ga0373953_0010216_55_1314 398
221 3300035119 Ga0373956_0009394 Ga0373956_0009394_334_1593 398
222 3300035172 Ga0373955_0026999 Ga0373955_0026999_1576_2835 398
223 3300035410 Ga0373924_0035231 Ga0373924_0035231_719_1978 398
224 3300035724 Ga0373933_0004951 Ga0373933_0004951_2150_3409 398
225 3300036401 Ga0373937_0010559 Ga0373937_0010559_1919_3178 398
226 3300036712 Ga0316584_0001367 Ga0316584_0001367_1964_3214 398
227 3300042876 Ga0451577_0008916 Ga0451577_0008916_3696_4949 398
228 3300044673 Ga0453683_0079560 Ga0453683_0079560_220_1473 398
229 3300044673 Ga0453683_0124741 Ga0453683_0124741_281_1534 398
230 3300044712 Ga0453684_0132307 Ga0453684_0132307_500_1759 398
231 3300045051 Ga0451576_0007887 Ga0451576_0007887_11201_12454 398
232 3300045051 Ga0451576_0011517 Ga0451576_0011517_3077_4336 398
233 3300045051 Ga0451576_0024952 Ga0451576_0024952_1014_2273 398
234 3300045051 Ga0451576_0049599 Ga0451576_0049599_663_1916 398
235 3300045051 Ga0451576_0060046 Ga0451576_0060046_1400_2659 398
236 3300045051 Ga0451576_0068222 Ga0451576_0068222_1762_3021 398
237 3300046454 Ga0495592_0026436 Ga0495592_0026436_1654_2913 398
238 3300046462 Ga0495651_0036006 Ga0495651_0036006_2372_3631 398
239 3300046514 Ga0495618_0001271 Ga0495618_0001271_13211_14470 398
240 3300046516 Ga0495628_0016184 Ga0495628_0016184_2218_3477 398
241 3300046516 Ga0495628_0052126 Ga0495628_0052126_1636_2895 398
242 3300046529 Ga0495652_0090897 Ga0495652_0090897_447_1706 398
243 3300046535 Ga0495586_0019087 Ga0495586_0019087_1005_2264 398
244 3300046536 Ga0495587_0009105 Ga0495587_0009105_4411_5670 398
245 3300046664 Ga0495659_0000901 Ga0495659_0000901_4451_5704 398
246 3300046678 Ga0495599_0045200 Ga0495599_0045200_89_1348 398
247 3300046809 Ga0495600_0043537 Ga0495600_0043537_256_1515 398
248 3300047321 Ga0495676_0134840 Ga0495676_0134840_39_1298 398
249 3300047444 Ga0495675_0001224 Ga0495675_0001224_329_1588 398
250 3300050507 nmdc:mga05p37_1681_c1 nmdc:mga05p37_1681_c1_13017_14270 398
251 3300050507 nmdc:mga05p37_287981_c1 nmdc:mga05p37_287981_c1_280_1539 398
252 3300050507 nmdc:mga05p37_352161_c1 nmdc:mga05p37_352161_c1_321_1580 398
253 3300050507 nmdc:mga05p37_38996_c1 nmdc:mga05p37_38996_c1_505_1764 398
254 3300050508 nmdc:mga09592_189_c1 nmdc:mga09592_189_c1_19270_20529 398
255 3300050510 nmdc:mga06r32_273671_c1 nmdc:mga06r32_273671_c1_82_1371 398
256 3300050510 nmdc:mga06r32_53328_c1 nmdc:mga06r32_53328_c1_1448_2701 398
257 3300050511 nmdc:mga08y16_118232_c2 nmdc:mga08y16_118232_c2_153_1412 398
258 3300050511 nmdc:mga08y16_24361_c1 nmdc:mga08y16_24361_c1_2267_3520 398
259 3300050511 nmdc:mga08y16_25021_c1 nmdc:mga08y16_25021_c1_855_2108 398
260 3300050511 nmdc:mga08y16_343623_c1 nmdc:mga08y16_343623_c1_53_1312 398
261 3300050512 nmdc:mga0n895_106240_c1 nmdc:mga0n895_106240_c1_889_2142 398
262 3300050512 nmdc:mga0n895_21997_c1 nmdc:mga0n895_21997_c1_3812_5071 398
263 3300050512 nmdc:mga0n895_31761_c1 nmdc:mga0n895_31761_c1_1233_2492 398
264 3300050512 nmdc:mga0n895_42_c1 nmdc:mga0n895_42_c1_64665_65918 398
265 3300050512 nmdc:mga0n895_4854_c1 nmdc:mga0n895_4854_c1_7373_8626 398
266 3300050513 nmdc:mga0rr50_192058_c1 nmdc:mga0rr50_192058_c1_248_1501 398
267 3300050514 nmdc:mga08x19_1327_c1 nmdc:mga08x19_1327_c1_749_2002 398
268 3300050514 nmdc:mga08x19_145569_c1 nmdc:mga08x19_145569_c1_97_1356 398
269 3300050514 nmdc:mga08x19_212967_c1 nmdc:mga08x19_212967_c1_31_1290 398
270 3300050515 nmdc:mga0a205_14544_c1 nmdc:mga0a205_14544_c1_3722_4975 398
271 3300050515 nmdc:mga0a205_22533_c1 nmdc:mga0a205_22533_c1_2632_3891 398
272 3300050515 nmdc:mga0a205_57_c1 nmdc:mga0a205_57_c1_34239_35492 398
273 3300050515 nmdc:mga0a205_82259_c1 nmdc:mga0a205_82259_c1_545_1798 398
274 3300050515 nmdc:mga0a205_93563_c1 nmdc:mga0a205_93563_c1_586_1845 398
275 3300053084 Ga0495595_0002045 Ga0495595_0002045_2315_3574 398
276 3300053085 Ga0495619_0021878 Ga0495619_0021878_148_1407 398
277 3300059510 Ga0587090_008176 Ga0587090_008176_18_1262 398

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06689

zf-C4_ClpX

ClpX C4-type zinc finger

39

77

0.96

PF07724

AAA_2

AAA domain (Cdc48 subfamily)

139

340

0.94

PF10431

ClpB_D2-small

C-terminal, D2-small domain, of ClpB protein

346

424

0.92

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

144

293

0.83

PF00493

MCM

MCM P-loop domain

92

229

0.75

PF07728

AAA_5

AAA domain (dynein-related subfamily)

143

228

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ds7-assembly1.cif.gz_A-2 structure of the zbd in the hexagonal crystal form 0.9895 4 41
2ds8-assembly1.cif.gz_A structure of the zbd-xb complex 0.9365 1 41
4i9k-assembly1.cif.gz_A crystal structure of symmetric w-w-w clpx hexamer 0.9271 48 389
6vfs-assembly1.cif.gz_F clpxp from neisseria meningitidis - conformation a 0.9221 48 382
2ds7-assembly1.cif.gz_A-2 structure of the zbd in the hexagonal crystal form 0.9187 4 41
ID Description Score Start End Superfamily
af_Q65XY4_412_513_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9659 294 384 1.10.8.60
2ds6A00 Special;Other non-globular;Erythroid Transcription Factor GATA-1; Chain A;ClpX chaperone, C4-type zinc finger domain 0.9586 3 41 6.20.220.10
2ds8B00 Special;Other non-globular;Erythroid Transcription Factor GATA-1; Chain A;ClpX chaperone, C4-type zinc finger domain 0.9559 3 41 6.20.220.10
af_A0A0P0WPU2_296_397_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9433 294 381 1.10.8.60
af_A0A0G2KJF1_499_602_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9425 294 384 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A7K1E6T4-F1-model_v4 deleted 0.97 286 376
AF-A0A2H2J1S4-F1-model_v4 deleted 0.967 264 384
AF-A0A832H115-F1-model_v4 ATP-dependent Clp protease ATP-binding subunit ClpX 0.9635 264 383 GO:0005524
GO:0008233
GO:0009376
GO:0016887
GO:0051301
GO:0051603
AF-A0A6M1SH18-F1-model_v4 AAA domain-containing protein 0.9592 48 165 GO:0005524
GO:0009376
GO:0016887
GO:0051301
GO:0051603
AF-A0A2N1SSL7-F1-model_v4 deleted 0.9589 284 377

Feature Viewer

pLDDT pTM Quality
81.73 0.76 High
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Predicted Structure (AlphaFold2)

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