F380616

General Info

Members Datasets Scaffolds Average Seq Length
275 161 269 262

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0176853|Ga0466967_0176853_505_1338
Length 277
Sequence VRSGEAYDAARGEGRAALVGYLPAGFPSYDGCLDALRAMADNGVDIVEVGLPYSDPVIDGPTIQAAAELALRQGTRIADVLRTVEATAAMDVAVVVMTYWNPVLAYGVERFAADLAAAGGSGLITPDLIPDEAGEWIAASDAHDLERVFLVAPSSSQARIAATTAAARGWVYAASTMGVTGARSATSAVAPALVRRTRATTDLPIGVGLGVSNGDQAAEVASYADGVIVGSALVRCVLDAANPGEGAAAAGKLTAELARGVRSAAGSPTGRVTTSSS

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2643221711 Terrabacter sp. Root85 Isolate Unclassified
4 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
5 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
6 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
7 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
20 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
21 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
54 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
83 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
84 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
88 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
89 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
97 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
98 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
99 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
100 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
101 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
105 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
108 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
109 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
115 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
116 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
121 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
124 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
136 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
137 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
138 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
139 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
140 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
151 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
152 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
153 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
154 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
155 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
156 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
157 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
158 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
159 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
160 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.73
Metatranscriptomes 1.09
Isolates 2.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.82
Nodule 0
Rhizoplane 12.73
Rhizosphere 84.36
Stem 0
Stem Tuber 0
Unclassified 1.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020133 3300001979 Bacteria 2335
2 Ga0070658_10008873 3300005327 Bacteria 8081
3 Ga0070658_10146709 3300005327 Bacteria 1973
4 Ga0070658_10266485 3300005327 Bacteria 1456
5 Ga0070658_10436810 3300005327 Bacteria 1127
6 Ga0070683_100007293 3300005329 Bacteria 9329
7 Ga0070683_100012098 3300005329 Bacteria 7487
8 Ga0070683_100056733 3300005329 Bacteria 3637
9 Ga0070683_100112262 3300005329 Bacteria 2572
10 Ga0070680_100074733 3300005336 Bacteria 2789
11 Ga0070682_100243205 3300005337 Bacteria 1293
12 Ga0070682_100288611 3300005337 Bacteria 1199
13 Ga0070660_100010023 3300005339 Bacteria 6683
14 Ga0070660_100031685 3300005339 Bacteria 3973
15 Ga0070660_100060569 3300005339 Bacteria 2938
16 Ga0070660_100254815 3300005339 Bacteria 1432
17 Ga0070687_100025378 3300005343 Bacteria 2843
18 Ga0070692_10062321 3300005345 Bacteria 1968
19 Ga0070668_100073959 3300005347 Bacteria 2658
20 Ga0070659_100000756 3300005366 Bacteria 23470
21 Ga0070659_100011044 3300005366 Bacteria 6670
22 Ga0070667_100300132 3300005367 Bacteria 1446
23 Ga0070709_10212574 3300005434 Bacteria 1375
24 Ga0070714_100309937 3300005435 Bacteria 1473
25 Ga0070714_100334898 3300005435 Bacteria 1418
26 Ga0070663_100307452 3300005455 Bacteria 1271
27 Ga0070678_100378592 3300005456 Bacteria 1224
28 Ga0070698_100003599 3300005471 Bacteria 17028
29 Ga0070679_100069097 3300005530 Bacteria 3523
30 Ga0070679_100103058 3300005530 Bacteria 2840
31 Ga0070679_100489429 3300005530 Bacteria 1174
32 Ga0070684_100011326 3300005535 Bacteria 7101
33 Ga0068857_100046446 3300005577 Bacteria 3854
34 Ga0068857_100397074 3300005577 Bacteria 1283
35 Ga0068857_100458188 3300005577 Bacteria 1193
36 Ga0068856_100560327 3300005614 Bacteria 1164
37 Ga0068864_100069098 3300005618 Bacteria 3071
38 Ga0068864_100728848 3300005618 Bacteria 970
39 Ga0068866_10106567 3300005718 Bacteria 1556
40 Ga0068862_100303241 3300005844 Bacteria 1470
41 Ga0075365_10001799 3300006038 Bacteria 10006
42 Ga0075364_10012685 3300006051 Bacteria 5164
43 Ga0075428_100002388 3300006844 Bacteria 20390
44 Ga0075430_100001494 3300006846 Bacteria 19070
45 Ga0075431_100005910 3300006847 Bacteria 12104
46 Ga0075429_100001255 3300006880 Bacteria 20625
47 Ga0075429_100006376 3300006880 Bacteria 10208
48 Ga0068865_100114784 3300006881 Bacteria 1992
49 Ga0105245_10001522 3300009098 Bacteria 20974
50 Ga0105245_10298950 3300009098 Bacteria 1579
51 Ga0114129_10002477 3300009147 Bacteria 25644
52 Ga0114129_10069942 3300009147 Bacteria 4894
53 Ga0105243_10071050 3300009148 Bacteria 2813
54 Ga0105243_10127984 3300009148 Bacteria 2151
55 Ga0105248_10098819 3300009177 Bacteria 3288
56 Ga0105249_10061100 3300009553 Bacteria 3458
57 Ga0105249_10215780 3300009553 Bacteria 1885
58 Ga0105239_10001423 3300010375 Bacteria 31953
59 Ga0105246_10021329 3300011119 Bacteria 4167
60 Ga0157369_10017291 3300013105 Bacteria 8106
61 Ga0157369_10037965 3300013105 Bacteria 5269
62 Ga0157369_10038747 3300013105 Bacteria 5211
63 Ga0157369_10248115 3300013105 Bacteria 1859
64 Ga0157369_10353754 3300013105 Bacteria 1525
65 Ga0157369_10480116 3300013105 Bacteria 1286
66 Ga0157369_10812926 3300013105 Bacteria 960
67 Ga0163162_10017360 3300013306 Bacteria 7040
68 Ga0157372_10295288 3300013307 Bacteria 1885
69 Ga0157372_10355647 3300013307 Bacteria 1706
70 Ga0157375_10119705 3300013308 Bacteria 2741
71 Ga0157375_10366815 3300013308 Bacteria 1606
72 Ga0157375_10487199 3300013308 Bacteria 1398
73 Ga0163163_10033223 3300014325 Bacteria 4990
74 Ga0163163_10052229 3300014325 Bacteria 4032
75 Ga0163163_10794269 3300014325 Bacteria 1010
76 Ga0157377_10331372 3300014745 Bacteria 1015
77 Ga0157379_10083250 3300014968 Bacteria 2867
78 Ga0163161_10014048 3300017792 Bacteria 5576
79 Ga0206354_10098419 3300020081 Bacteria 1473
80 Ga0206354_10320697 3300020081 Bacteria 4251
81 Ga0206354_10547242 3300020081 Bacteria 2699
82 Ga0213876_10001682 3300021384 Bacteria 13460
83 Ga0207688_10010211 3300025901 Bacteria 5111
84 Ga0207647_10001748 3300025904 Bacteria 16661
85 Ga0207647_10003080 3300025904 Bacteria 12532
86 Ga0207647_10050769 3300025904 Bacteria 2567
87 Ga0207647_10051145 3300025904 Bacteria 2555
88 Ga0207699_10104581 3300025906 Bacteria 1803
89 Ga0207705_10005881 3300025909 Bacteria 9123
90 Ga0207693_10229231 3300025915 Bacteria 1459
91 Ga0207660_10253482 3300025917 Bacteria 1389
92 Ga0207657_10004836 3300025919 Bacteria 14184
93 Ga0207657_10116529 3300025919 Bacteria 2201
94 Ga0207657_10200444 3300025919 Bacteria 1606
95 Ga0207652_10124760 3300025921 Bacteria 2293
96 Ga0207652_10148035 3300025921 Bacteria 2102
97 Ga0207652_10154017 3300025921 Bacteria 2059
98 Ga0207652_10452252 3300025921 Bacteria 1158
99 Ga0207664_10389660 3300025929 Bacteria 1238
100 Ga0207690_10001938 3300025932 Bacteria 12687
101 Ga0207690_10025977 3300025932 Bacteria 3685
102 Ga0207690_10169680 3300025932 Bacteria 1634
103 Ga0207669_10163878 3300025937 Bacteria 1574
104 Ga0207704_10038505 3300025938 Bacteria 2774
105 Ga0207661_10027721 3300025944 Bacteria 4330
106 Ga0207661_10055428 3300025944 Bacteria 3180
107 Ga0207661_10107161 3300025944 Bacteria 2357
108 Ga0207661_10281753 3300025944 Bacteria 1486
109 Ga0207661_10326464 3300025944 Bacteria 1380
110 Ga0207667_10124607 3300025949 Bacteria 2654
111 Ga0207712_10088972 3300025961 Bacteria 2269
112 Ga0207658_10042873 3300025986 Bacteria 3286
113 Ga0207702_10038621 3300026078 Bacteria 3998
114 Ga0207702_10180032 3300026078 Bacteria 1946
115 Ga0207676_10069297 3300026095 Bacteria 2824
116 Ga0207674_10009166 3300026116 Bacteria 11348
117 Ga0207683_10229932 3300026121 Bacteria 1691
118 Ga0207683_10568595 3300026121 Bacteria 1049
119 Ga0207698_10592980 3300026142 Bacteria 1092
120 Ga0268264_10564114 3300028381 Bacteria 1118
121 Ga0265338_10114467 3300028800 Bacteria 2164
122 Ga0265325_10041314 3300031241 Bacteria 2417
123 Ga0265339_10018754 3300031249 Bacteria 4074
124 Ga0265313_10024144 3300031595 Bacteria 3255
125 Ga0307410_10114692 3300031852 Bacteria 1955
126 Ga0307410_10298912 3300031852 Bacteria 1269
127 Ga0307406_10230265 3300031901 Bacteria 1383
128 Ga0307412_10231097 3300031911 Bacteria 1424
129 Ga0307409_100054646 3300031995 Bacteria 3077
130 Ga0307416_100006606 3300032002 Bacteria 7278
131 Ga0307411_10107139 3300032005 Bacteria 1991
132 Ga0307415_100123513 3300032126 Bacteria 1946
133 Ga0307415_100640255 3300032126 Bacteria 952
134 Ga0373934_0138474 3300035086 Bacteria 995
135 Ga0373956_0006553 3300035119 Bacteria 4665
136 Ga0373931_0389096 3300035691 Bacteria 881
137 Ga0395901_0024338 3300038443 Bacteria 6214
138 Ga0395901_0071451 3300038443 Bacteria 3617
139 Ga0395901_0203296 3300038443 Bacteria 2076
140 Ga0436365_0327584 3300039437 Bacteria 17350
141 Ga0466965_0006744 3300044683 Bacteria 5239
142 Ga0466966_0033129 3300044684 Bacteria 3346
143 Ga0466961_0097580 3300044693 Bacteria 1853
144 Ga0466963_0069965 3300044694 Bacteria 2360
145 Ga0466964_0018444 3300044706 Bacteria 2678
146 Ga0466964_0051312 3300044706 Bacteria 1694
147 Ga0466964_0087360 3300044706 Bacteria 1351
148 Ga0466957_0024187 3300044842 Bacteria 3593
149 Ga0466958_0025290 3300045836 Bacteria 3499
150 Ga0466967_0000778 3300045976 Bacteria 16590
151 Ga0466967_0054535 3300045976 Bacteria 3519
152 Ga0466967_0089460 3300045976 Bacteria 2796
153 Ga0466967_0113661 3300045976 Bacteria 2491
154 Ga0466967_0124156 3300045976 Bacteria 2389
155 Ga0466967_0176853 3300045976 Bacteria 2011
156 Ga0466967_0421393 3300045976 Bacteria 1301
157 Ga0466967_0595065 3300045976 Bacteria 1091
158 Ga0466967_0615054 3300045976 Bacteria 1073
159 Ga0495639_0122679 3300046475 Bacteria 1240
160 Ga0495608_0210801 3300046511 Bacteria 1221
161 Ga0495667_0151218 3300046559 Bacteria 1495
162 Ga0495635_0175956 3300046663 Bacteria 1455
163 Ga0495647_0159543 3300046681 Bacteria 971
164 Ga0495658_0061211 3300046683 Bacteria 2161
165 Ga0495581_0038330 3300047315 Bacteria 2774
166 Ga0495674_0509998 3300047319 Bacteria 961
167 Ga0495680_0068257 3300047322 Bacteria 2717
168 Ga0495680_0183946 3300047322 Bacteria 1507
169 Ga0496100_0040718 3300048903 Bacteria 2958
170 Ga0496100_0059012 3300048903 Bacteria 2520
171 Ga0496100_0327090 3300048903 Bacteria 1153
172 Ga0496100_0777523 3300048903 Bacteria 749
173 Ga0496101_0446823 3300048904 Bacteria 1020
174 Ga0496102_0020168 3300048905 Bacteria 5886
175 Ga0496102_0053224 3300048905 Bacteria 3690
176 Ga0496102_0091680 3300048905 Bacteria 2813
177 Ga0496102_0581600 3300048905 Bacteria 1043
178 Ga0496103_0013221 3300048906 Bacteria 4894
179 Ga0496103_0547019 3300048906 Bacteria 739
180 Ga0496104_0329580 3300048907 Bacteria 1440
181 Ga0496104_0570943 3300048907 Bacteria 1041
182 Ga0496105_0021475 3300048908 Bacteria 5223
183 Ga0496106_0245848 3300048909 Bacteria 1430
184 Ga0496106_0350462 3300048909 Bacteria 1186
185 Ga0496107_0007657 3300048910 Bacteria 7456
186 Ga0496108_0078335 3300048911 Bacteria 2797
187 Ga0496108_0399282 3300048911 Bacteria 1201
188 Ga0496109_0024056 3300048912 Bacteria 5412
189 Ga0496109_0024355 3300048912 Bacteria 5381
190 Ga0496109_0175008 3300048912 Bacteria 2014
191 Ga0496109_0184582 3300048912 Bacteria 1960
192 Ga0496109_0248672 3300048912 Bacteria 1674
193 Ga0496109_0439840 3300048912 Bacteria 1232
194 Ga0496110_0028216 3300048913 Bacteria 4818
195 Ga0496110_0088932 3300048913 Bacteria 2759
196 Ga0496110_0196250 3300048913 Bacteria 1833
197 Ga0496111_0003318 3300048914 Bacteria 9952
198 Ga0496111_0040239 3300048914 Bacteria 3353
199 Ga0496112_0250360 3300048915 Bacteria 1723
200 Ga0496113_0036665 3300048916 Bacteria 3594
201 Ga0496113_0250148 3300048916 Bacteria 1415
202 Ga0496114_0172192 3300048917 Bacteria 1887
203 Ga0496115_0158043 3300048918 Bacteria 1873
204 Ga0501031_0001359 3300049568 Bacteria 15105
205 Ga0501032_0005074 3300049569 Bacteria 9835
206 Ga0501032_0009897 3300049569 Bacteria 6891
207 Ga0501032_0547856 3300049569 Bacteria 738
208 Ga0501034_0005065 3300049571 Bacteria 14477
209 Ga0501034_0201441 3300049571 Bacteria 1948
210 Ga0501036_0361390 3300049572 Bacteria 1212
211 Ga0501036_0450465 3300049572 Bacteria 1072
212 Ga0501037_0021091 3300049573 Bacteria 4813
213 Ga0501038_0000154 3300049574 Bacteria 58853
214 Ga0501040_0034446 3300049576 Bacteria 3430
215 Ga0501043_0010209 3300049579 Bacteria 7360
216 Ga0501043_0312999 3300049579 Bacteria 1198
217 Ga0501047_0020725 3300049581 Bacteria 6314
218 Ga0501047_0455653 3300049581 Bacteria 1108
219 Ga0501048_0000017 3300049582 Bacteria 72572
220 Ga0501067_0000937 3300049583 Bacteria 15633
221 Ga0501067_0001083 3300049583 Bacteria 14679
222 Ga0501067_0114829 3300049583 Bacteria 1497
223 Ga0501069_0016813 3300049585 Bacteria 3930
224 Ga0501069_0041038 3300049585 Bacteria 2557
225 Ga0501069_0050741 3300049585 Bacteria 2307
226 Ga0501069_0233803 3300049585 Bacteria 1070
227 Ga0501070_0001434 3300049586 Bacteria 21325
228 Ga0501070_0002158 3300049586 Bacteria 17295
229 Ga0501070_0004523 3300049586 Bacteria 11933
230 Ga0501070_0015232 3300049586 Bacteria 6472
231 Ga0501070_0026694 3300049586 Bacteria 4844
232 Ga0501071_0013221 3300049587 Bacteria 5623
233 Ga0501071_0130295 3300049587 Bacteria 1868
234 Ga0501072_0024971 3300049588 Bacteria 4653
235 Ga0501073_0001438 3300049589 Bacteria 17600
236 Ga0501073_0019358 3300049589 Bacteria 4915
237 Ga0501074_0002081 3300049590 Bacteria 13828
238 Ga0501074_0005813 3300049590 Bacteria 8894
239 Ga0501074_0039508 3300049590 Bacteria 3417
240 Ga0501076_0456633 3300049592 Bacteria 1052
241 Ga0501077_0052575 3300049593 Bacteria 2587
242 Ga0501079_0020851 3300049741 Bacteria 5012
243 Ga0501079_0027674 3300049741 Bacteria 4349
244 Ga0501079_0164951 3300049741 Bacteria 1727
245 Ga0501080_0004483 3300049742 Bacteria 12434
246 Ga0501080_0009062 3300049742 Bacteria 9057
247 Ga0501080_0030399 3300049742 Bacteria 5032
248 Ga0501080_0110055 3300049742 Bacteria 2553
249 Ga0501080_0128372 3300049742 Bacteria 2347
250 Ga0501083_0026338 3300049744 Bacteria 4019
251 Ga0501035_0009404 3300049822 Bacteria 9086
252 Ga0501035_0080802 3300049822 Bacteria 2870
253 Ga0501044_0004741 3300049823 Bacteria 15203
254 Ga0501044_0033459 3300049823 Bacteria 5402
255 Ga0501045_0129485 3300049824 Bacteria 1876
256 nmdc:mga00v17_9966_c1 3300050491 Bacteria 5169
257 nmdc:mga0yw44_4189_c1 3300050492 Bacteria 6560
258 nmdc:mga05p37_1442_c1 3300050507 Bacteria 27643
259 nmdc:mga05p37_151247_c1 3300050507 Bacteria 2839
260 nmdc:mga09592_30285_c1 3300050508 Bacteria 4503
261 nmdc:mga0qj67_29116_c1 3300050509 Bacteria 4290
262 nmdc:mga06r32_30698_c1 3300050510 Bacteria 5045
263 Ga0495612_0059198 3300053078 Bacteria 1584
264 Ga0495595_0069005 3300053084 Bacteria 1668
265 Ga0500641_0002470 3300053096 Bacteria 6532
266 Ga0501082_0009567 3300060353 Bacteria 8340
267 Ga0501082_0018854 3300060353 Bacteria 5944
268 Ga0466962_0016228 3300061719 Bacteria 3592
269 Ga0530510_0077765 3300061734 Bacteria 2411

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044694 Ga0466963_0069965 Ga0466963_0069965_797_1492 217
2 3300006844 Ga0075428_100002388 Ga0075428_1000023885 218
3 3300006846 Ga0075430_100001494 Ga0075430_10000149421 218
4 3300006847 Ga0075431_100005910 Ga0075431_1000059106 218
5 3300006880 Ga0075429_100001255 Ga0075429_1000012555 218
6 3300009147 Ga0114129_10002477 Ga0114129_100024778 218
7 3300050507 nmdc:mga05p37_1442_c1 nmdc:mga05p37_1442_c1_8167_8985 218
8 3300050509 nmdc:mga0qj67_29116_c1 nmdc:mga0qj67_29116_c1_1557_2375 218
9 3300050510 nmdc:mga06r32_30698_c1 nmdc:mga06r32_30698_c1_1953_2771 218
10 3300013105 Ga0157369_10812926 Ga0157369_108129262 220
11 3300035691 Ga0373931_0389096 Ga0373931_0389096_187_864 224
12 3300048904 Ga0496101_0446823 Ga0496101_0446823_318_1001 226
13 3300048906 Ga0496103_0547019 Ga0496103_0547019_40_720 226
14 3300021384 Ga0213876_10001682 Ga0213876_100016824 229
15 3300039437 Ga0436365_0327584 Ga0436365_0327584_8432_9229 229
16 3300048903 Ga0496100_0777523 Ga0496100_0777523_35_730 229
17 3300048907 Ga0496104_0570943 Ga0496104_0570943_13_708 229
18 3300049569 Ga0501032_0547856 Ga0501032_0547856_31_720 229
19 3300049579 Ga0501043_0312999 Ga0501043_0312999_468_1172 229
20 3300044706 Ga0466964_0087360 Ga0466964_0087360_75_893 231
21 3300013105 Ga0157369_10017291 Ga0157369_100172917 234
22 3300005367 Ga0070667_100300132 Ga0070667_1003001322 239
23 3300005618 Ga0068864_100728848 Ga0068864_1007288482 239
24 3300014325 Ga0163163_10794269 Ga0163163_107942692 239
25 3300048905 Ga0496102_0091680 Ga0496102_0091680_1044_1832 239
26 3300048911 Ga0496108_0078335 Ga0496108_0078335_1482_2270 239
27 3300048912 Ga0496109_0184582 Ga0496109_0184582_502_1290 239
28 3300005435 Ga0070714_100334898 Ga0070714_1003348982 240
29 3300038443 Ga0395901_0203296 Ga0395901_0203296_357_1148 241
30 3300026078 Ga0207702_10038621 Ga0207702_100386212 245
31 3300026121 Ga0207683_10568595 Ga0207683_105685952 245
32 3300045976 Ga0466967_0000778 Ga0466967_0000778_4686_5477 245
33 3300048905 Ga0496102_0581600 Ga0496102_0581600_59_883 245
34 3300050492 nmdc:mga0yw44_4189_c1 nmdc:mga0yw44_4189_c1_778_1575 245
35 3300005337 Ga0070682_100243205 Ga0070682_1002432052 246
36 3300013307 Ga0157372_10295288 Ga0157372_102952882 246
37 3300025904 Ga0207647_10051145 Ga0207647_100511452 246
38 3300031852 Ga0307410_10114692 Ga0307410_101146921 246
39 3300031901 Ga0307406_10230265 Ga0307406_102302652 246
40 3300031911 Ga0307412_10231097 Ga0307412_102310972 246
41 3300032005 Ga0307411_10107139 Ga0307411_101071392 246
42 3300045976 Ga0466967_0595065 Ga0466967_0595065_246_1052 247
43 3300028800 Ga0265338_10114467 Ga0265338_101144672 248
44 3300031249 Ga0265339_10018754 Ga0265339_100187542 248
45 3300031595 Ga0265313_10024144 Ga0265313_100241443 248
46 3300005327 Ga0070658_10146709 Ga0070658_101467092 249
47 3300005339 Ga0070660_100010023 Ga0070660_1000100234 249
48 3300005366 Ga0070659_100011044 Ga0070659_1000110448 249
49 3300025904 Ga0207647_10003080 Ga0207647_1000308014 249
50 3300025919 Ga0207657_10004836 Ga0207657_100048364 249
51 3300025932 Ga0207690_10025977 Ga0207690_100259773 249
52 3300005471 Ga0070698_100003599 Ga0070698_10000359910 254
53 3300013105 Ga0157369_10038747 Ga0157369_100387472 254
54 iso_pu_bacteria 2919713450 2919718833 255
55 iso_pu_bacteria 2966921586 2966922809 256
56 3300006038 Ga0075365_10001799 Ga0075365_100017993 257
57 3300048911 Ga0496108_0399282 Ga0496108_0399282_250_1077 257
58 3300038443 Ga0395901_0024338 Ga0395901_0024338_2252_3055 258
59 iso_pu_bacteria 2551306166 2552107290 258
60 3300006880 Ga0075429_100006376 Ga0075429_1000063765 259
61 3300009147 Ga0114129_10069942 Ga0114129_100699425 259
62 3300025929 Ga0207664_10389660 Ga0207664_103896601 259
63 3300045976 Ga0466967_0089460 Ga0466967_0089460_240_1031 259
64 3300049568 Ga0501031_0001359 Ga0501031_0001359_5721_6509 259
65 3300049569 Ga0501032_0005074 Ga0501032_0005074_6957_7745 259
66 3300049572 Ga0501036_0361390 Ga0501036_0361390_305_1093 259
67 3300049573 Ga0501037_0021091 Ga0501037_0021091_2274_3062 259
68 3300049574 Ga0501038_0000154 Ga0501038_0000154_48874_49662 259
69 3300049579 Ga0501043_0010209 Ga0501043_0010209_5781_6569 259
70 3300049581 Ga0501047_0020725 Ga0501047_0020725_2661_3449 259
71 3300049582 Ga0501048_0000017 Ga0501048_0000017_52599_53387 259
72 3300049822 Ga0501035_0009404 Ga0501035_0009404_1769_2557 259
73 3300049823 Ga0501044_0033459 Ga0501044_0033459_566_1354 259
74 3300050507 nmdc:mga05p37_151247_c1 nmdc:mga05p37_151247_c1_1491_2273 259
75 3300050508 nmdc:mga09592_30285_c1 nmdc:mga09592_30285_c1_727_1509 259
76 3300005455 Ga0070663_100307452 Ga0070663_1003074521 260
77 3300013105 Ga0157369_10353754 Ga0157369_103537541 260
78 3300025909 Ga0207705_10005881 Ga0207705_100058815 260
79 3300025921 Ga0207652_10452252 Ga0207652_104522521 260
80 iso_pu_bacteria 2643221711 2644611066 260
81 iso_pu_bacteria 2818991458 2819666736 260
82 3300020081 Ga0206354_10547242 Ga0206354_105472422 261
83 3300031852 Ga0307410_10298912 Ga0307410_102989122 261
84 3300031995 Ga0307409_100054646 Ga0307409_1000546463 261
85 3300044706 Ga0466964_0018444 Ga0466964_0018444_892_1701 262
86 3300044842 Ga0466957_0024187 Ga0466957_0024187_740_1549 262
87 3300045836 Ga0466958_0025290 Ga0466958_0025290_707_1516 262
88 3300049592 Ga0501076_0456633 Ga0501076_0456633_190_978 262
89 3300049824 Ga0501045_0129485 Ga0501045_0129485_875_1663 262
90 3300061719 Ga0466962_0016228 Ga0466962_0016228_2270_3079 262
91 3300020081 Ga0206354_10320697 Ga0206354_103206974 263
92 3300044684 Ga0466966_0033129 Ga0466966_0033129_975_1772 263
93 3300045976 Ga0466967_0113661 Ga0466967_0113661_814_1617 263
94 3300045976 Ga0466967_0176853 Ga0466967_0176853_505_1338 263
95 3300045976 Ga0466967_0421393 Ga0466967_0421393_132_929 263
96 3300005327 Ga0070658_10008873 Ga0070658_100088738 264
97 3300005329 Ga0070683_100007293 Ga0070683_1000072933 264
98 3300005329 Ga0070683_100012098 Ga0070683_1000120985 264
99 3300005329 Ga0070683_100056733 Ga0070683_1000567332 264
100 3300005336 Ga0070680_100074733 Ga0070680_1000747332 264
101 3300005337 Ga0070682_100288611 Ga0070682_1002886112 264
102 3300005339 Ga0070660_100031685 Ga0070660_1000316853 264
103 3300005343 Ga0070687_100025378 Ga0070687_1000253782 264
104 3300005345 Ga0070692_10062321 Ga0070692_100623212 264
105 3300005434 Ga0070709_10212574 Ga0070709_102125741 264
106 3300005435 Ga0070714_100309937 Ga0070714_1003099371 264
107 3300005456 Ga0070678_100378592 Ga0070678_1003785922 264
108 3300005530 Ga0070679_100103058 Ga0070679_1001030583 264
109 3300005577 Ga0068857_100046446 Ga0068857_1000464466 264
110 3300005577 Ga0068857_100397074 Ga0068857_1003970742 264
111 3300005614 Ga0068856_100560327 Ga0068856_1005603271 264
112 3300005618 Ga0068864_100069098 Ga0068864_1000690982 264
113 3300005718 Ga0068866_10106567 Ga0068866_101065672 264
114 3300005844 Ga0068862_100303241 Ga0068862_1003032412 264
115 3300006881 Ga0068865_100114784 Ga0068865_1001147843 264
116 3300009098 Ga0105245_10001522 Ga0105245_1000152216 264
117 3300009148 Ga0105243_10071050 Ga0105243_100710503 264
118 3300009177 Ga0105248_10098819 Ga0105248_100988193 264
119 3300009553 Ga0105249_10061100 Ga0105249_100611002 264
120 3300010375 Ga0105239_10001423 Ga0105239_1000142325 264
121 3300011119 Ga0105246_10021329 Ga0105246_100213292 264
122 3300013105 Ga0157369_10248115 Ga0157369_102481152 264
123 3300013105 Ga0157369_10480116 Ga0157369_104801161 264
124 3300013306 Ga0163162_10017360 Ga0163162_100173602 264
125 3300013307 Ga0157372_10355647 Ga0157372_103556472 264
126 3300013308 Ga0157375_10366815 Ga0157375_103668152 264
127 3300013308 Ga0157375_10487199 Ga0157375_104871991 264
128 3300014325 Ga0163163_10052229 Ga0163163_100522292 264
129 3300014745 Ga0157377_10331372 Ga0157377_103313722 264
130 3300014968 Ga0157379_10083250 Ga0157379_100832503 264
131 3300020081 Ga0206354_10098419 Ga0206354_100984191 264
132 3300025901 Ga0207688_10010211 Ga0207688_100102115 264
133 3300025904 Ga0207647_10050769 Ga0207647_100507692 264
134 3300025906 Ga0207699_10104581 Ga0207699_101045811 264
135 3300025915 Ga0207693_10229231 Ga0207693_102292312 264
136 3300025917 Ga0207660_10253482 Ga0207660_102534822 264
137 3300025921 Ga0207652_10148035 Ga0207652_101480351 264
138 3300025921 Ga0207652_10154017 Ga0207652_101540172 264
139 3300025932 Ga0207690_10169680 Ga0207690_101696802 264
140 3300025938 Ga0207704_10038505 Ga0207704_100385052 264
141 3300025944 Ga0207661_10027721 Ga0207661_100277215 264
142 3300025944 Ga0207661_10281753 Ga0207661_102817532 264
143 3300025944 Ga0207661_10326464 Ga0207661_103264642 264
144 3300025949 Ga0207667_10124607 Ga0207667_101246073 264
145 3300025961 Ga0207712_10088972 Ga0207712_100889722 264
146 3300025986 Ga0207658_10042873 Ga0207658_100428733 264
147 3300026078 Ga0207702_10180032 Ga0207702_101800322 264
148 3300026095 Ga0207676_10069297 Ga0207676_100692972 264
149 3300026116 Ga0207674_10009166 Ga0207674_100091666 264
150 3300026121 Ga0207683_10229932 Ga0207683_102299322 264
151 3300026142 Ga0207698_10592980 Ga0207698_105929802 264
152 3300028381 Ga0268264_10564114 Ga0268264_105641142 264
153 3300032002 Ga0307416_100006606 Ga0307416_1000066064 264
154 3300032126 Ga0307415_100123513 Ga0307415_1001235132 264
155 3300032126 Ga0307415_100640255 Ga0307415_1006402552 264
156 3300035086 Ga0373934_0138474 Ga0373934_0138474_51_851 264
157 3300035119 Ga0373956_0006553 Ga0373956_0006553_1739_2539 264
158 3300044683 Ga0466965_0006744 Ga0466965_0006744_3991_4803 264
159 3300045976 Ga0466967_0054535 Ga0466967_0054535_1851_2660 264
160 3300045976 Ga0466967_0124156 Ga0466967_0124156_95_904 264
161 3300046475 Ga0495639_0122679 Ga0495639_0122679_152_946 264
162 3300046511 Ga0495608_0210801 Ga0495608_0210801_315_1115 264
163 3300046663 Ga0495635_0175956 Ga0495635_0175956_134_928 264
164 3300046681 Ga0495647_0159543 Ga0495647_0159543_23_817 264
165 3300046683 Ga0495658_0061211 Ga0495658_0061211_94_888 264
166 3300047315 Ga0495581_0038330 Ga0495581_0038330_1596_2390 264
167 3300047319 Ga0495674_0509998 Ga0495674_0509998_58_858 264
168 3300047322 Ga0495680_0068257 Ga0495680_0068257_1160_1954 264
169 3300048903 Ga0496100_0040718 Ga0496100_0040718_1072_1866 264
170 3300048903 Ga0496100_0059012 Ga0496100_0059012_754_1548 264
171 3300048903 Ga0496100_0327090 Ga0496100_0327090_215_1009 264
172 3300048905 Ga0496102_0020168 Ga0496102_0020168_891_1685 264
173 3300048905 Ga0496102_0053224 Ga0496102_0053224_1721_2515 264
174 3300048906 Ga0496103_0013221 Ga0496103_0013221_2009_2809 264
175 3300048907 Ga0496104_0329580 Ga0496104_0329580_600_1394 264
176 3300048908 Ga0496105_0021475 Ga0496105_0021475_3221_4021 264
177 3300048909 Ga0496106_0245848 Ga0496106_0245848_475_1272 264
178 3300048909 Ga0496106_0350462 Ga0496106_0350462_347_1141 264
179 3300048910 Ga0496107_0007657 Ga0496107_0007657_1278_2072 264
180 3300048912 Ga0496109_0024056 Ga0496109_0024056_2619_3413 264
181 3300048912 Ga0496109_0024355 Ga0496109_0024355_2963_3757 264
182 3300048912 Ga0496109_0175008 Ga0496109_0175008_292_1086 264
183 3300048912 Ga0496109_0248672 Ga0496109_0248672_112_912 264
184 3300048913 Ga0496110_0028216 Ga0496110_0028216_3768_4562 264
185 3300048913 Ga0496110_0088932 Ga0496110_0088932_456_1256 264
186 3300048913 Ga0496110_0196250 Ga0496110_0196250_107_907 264
187 3300048914 Ga0496111_0003318 Ga0496111_0003318_8327_9121 264
188 3300048914 Ga0496111_0040239 Ga0496111_0040239_1008_1802 264
189 3300048915 Ga0496112_0250360 Ga0496112_0250360_218_1018 264
190 3300048916 Ga0496113_0036665 Ga0496113_0036665_822_1622 264
191 3300048916 Ga0496113_0250148 Ga0496113_0250148_570_1364 264
192 3300048917 Ga0496114_0172192 Ga0496114_0172192_1071_1865 264
193 3300048918 Ga0496115_0158043 Ga0496115_0158043_859_1653 264
194 3300049583 Ga0501067_0114829 Ga0501067_0114829_438_1232 264
195 3300053084 Ga0495595_0069005 Ga0495595_0069005_850_1644 264
196 3300005329 Ga0070683_100112262 Ga0070683_1001122621 265
197 3300006051 Ga0075364_10012685 Ga0075364_100126853 265
198 3300009098 Ga0105245_10298950 Ga0105245_102989502 265
199 3300025944 Ga0207661_10055428 Ga0207661_100554282 265
200 3300038443 Ga0395901_0071451 Ga0395901_0071451_688_1488 265
201 3300044693 Ga0466961_0097580 Ga0466961_0097580_603_1421 265
202 3300046559 Ga0495667_0151218 Ga0495667_0151218_642_1439 265
203 3300047322 Ga0495680_0183946 Ga0495680_0183946_357_1154 265
204 3300049569 Ga0501032_0009897 Ga0501032_0009897_587_1387 265
205 3300049581 Ga0501047_0455653 Ga0501047_0455653_100_900 265
206 3300049585 Ga0501069_0016813 Ga0501069_0016813_969_1769 265
207 3300049585 Ga0501069_0050741 Ga0501069_0050741_230_1030 265
208 3300049586 Ga0501070_0001434 Ga0501070_0001434_12818_13618 265
209 3300049586 Ga0501070_0002158 Ga0501070_0002158_230_1030 265
210 3300049586 Ga0501070_0026694 Ga0501070_0026694_1471_2271 265
211 3300049742 Ga0501080_0030399 Ga0501080_0030399_3994_4794 265
212 3300049742 Ga0501080_0110055 Ga0501080_0110055_80_880 265
213 3300049823 Ga0501044_0004741 Ga0501044_0004741_9610_10410 265
214 3300050491 nmdc:mga00v17_9966_c1 nmdc:mga00v17_9966_c1_1106_1906 265
215 3300053078 Ga0495612_0059198 Ga0495612_0059198_403_1212 265
216 3300053096 Ga0500641_0002470 Ga0500641_0002470_1961_2758 265
217 3300061734 Ga0530510_0077765 Ga0530510_0077765_728_1528 265
218 iso_pu_bacteria 2515154155 2515850905 265
219 3300013105 Ga0157369_10037965 Ga0157369_100379655 266
220 3300031241 Ga0265325_10041314 Ga0265325_100413142 266
221 3300049576 Ga0501040_0034446 Ga0501040_0034446_930_1733 266
222 3300005327 Ga0070658_10436810 Ga0070658_104368101 267
223 3300005339 Ga0070660_100060569 Ga0070660_1000605693 267
224 3300005347 Ga0070668_100073959 Ga0070668_1000739593 267
225 3300005366 Ga0070659_100000756 Ga0070659_10000075611 267
226 3300009148 Ga0105243_10127984 Ga0105243_101279843 267
227 3300009553 Ga0105249_10215780 Ga0105249_102157802 267
228 3300013308 Ga0157375_10119705 Ga0157375_101197053 267
229 3300014325 Ga0163163_10033223 Ga0163163_100332233 267
230 3300017792 Ga0163161_10014048 Ga0163161_100140482 267
231 3300025919 Ga0207657_10116529 Ga0207657_101165292 267
232 3300025932 Ga0207690_10001938 Ga0207690_100019384 267
233 3300025937 Ga0207669_10163878 Ga0207669_101638782 267
234 3300045976 Ga0466967_0615054 Ga0466967_0615054_74_922 267
235 3300048912 Ga0496109_0439840 Ga0496109_0439840_372_1196 267
236 3300049586 Ga0501070_0015232 Ga0501070_0015232_4873_5688 267
237 3300049589 Ga0501073_0019358 Ga0501073_0019358_3122_3937 267
238 3300049590 Ga0501074_0005813 Ga0501074_0005813_4677_5492 267
239 3300049741 Ga0501079_0164951 Ga0501079_0164951_847_1662 267
240 3300049742 Ga0501080_0128372 Ga0501080_0128372_482_1297 267
241 3300001979 JGI24740J21852_10020133 JGI24740J21852_100201332 268
242 3300005327 Ga0070658_10266485 Ga0070658_102664851 268
243 3300005339 Ga0070660_100254815 Ga0070660_1002548152 268
244 3300005530 Ga0070679_100069097 Ga0070679_1000690974 268
245 3300005530 Ga0070679_100489429 Ga0070679_1004894292 268
246 3300005535 Ga0070684_100011326 Ga0070684_1000113265 268
247 3300005577 Ga0068857_100458188 Ga0068857_1004581882 268
248 3300025904 Ga0207647_10001748 Ga0207647_100017483 268
249 3300025919 Ga0207657_10200444 Ga0207657_102004442 268
250 3300025921 Ga0207652_10124760 Ga0207652_101247601 268
251 3300025944 Ga0207661_10107161 Ga0207661_101071612 268
252 3300044706 Ga0466964_0051312 Ga0466964_0051312_141_947 268
253 3300049571 Ga0501034_0005065 Ga0501034_0005065_7670_8491 268
254 3300049571 Ga0501034_0201441 Ga0501034_0201441_964_1785 268
255 3300049572 Ga0501036_0450465 Ga0501036_0450465_41_862 268
256 3300049583 Ga0501067_0000937 Ga0501067_0000937_3522_4343 268
257 3300049583 Ga0501067_0001083 Ga0501067_0001083_10299_11120 268
258 3300049585 Ga0501069_0041038 Ga0501069_0041038_933_1754 268
259 3300049585 Ga0501069_0233803 Ga0501069_0233803_72_893 268
260 3300049586 Ga0501070_0004523 Ga0501070_0004523_3174_3995 268
261 3300049587 Ga0501071_0013221 Ga0501071_0013221_1617_2438 268
262 3300049587 Ga0501071_0130295 Ga0501071_0130295_779_1600 268
263 3300049588 Ga0501072_0024971 Ga0501072_0024971_267_1088 268
264 3300049589 Ga0501073_0001438 Ga0501073_0001438_3560_4381 268
265 3300049590 Ga0501074_0002081 Ga0501074_0002081_4020_4841 268
266 3300049590 Ga0501074_0039508 Ga0501074_0039508_224_1045 268
267 3300049593 Ga0501077_0052575 Ga0501077_0052575_1644_2465 268
268 3300049741 Ga0501079_0020851 Ga0501079_0020851_2523_3344 268
269 3300049741 Ga0501079_0027674 Ga0501079_0027674_3365_4186 268
270 3300049742 Ga0501080_0004483 Ga0501080_0004483_5889_6710 268
271 3300049742 Ga0501080_0009062 Ga0501080_0009062_1584_2405 268
272 3300049744 Ga0501083_0026338 Ga0501083_0026338_1548_2369 268
273 3300049822 Ga0501035_0080802 Ga0501035_0080802_1362_2183 268
274 3300060353 Ga0501082_0009567 Ga0501082_0009567_3373_4194 268
275 3300060353 Ga0501082_0018854 Ga0501082_0018854_3564_4385 268

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00290

Trp_syntA

Tryptophan synthase alpha chain

7

262

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tch-assembly2.cif.gz_G crystal structure of tryptophan synthase from m. tuberculosis - ligand-free form, trpa-g66v mutant 0.9851 7 266
5tcf-assembly2.cif.gz_E crystal structure of tryptophan synthase from m. tuberculosis - ligand-free form 0.9847 7 265
6dwe-assembly1.cif.gz_A crystal structure of tryptophan synthase from m. tuberculosis - aminoacrylate- and brd0059-bound form 0.9841 7 265
5ocw-assembly1.cif.gz_A structure of mycobacterium tuberculosis tryptophan synthase in space group f222 0.9794 7 266
6e9p-assembly2.cif.gz_C crystal structure of tryptophan synthase from m. tuberculosis - open form with brd0059 bound 0.9787 4 266
ID Description Score Start End Superfamily
6du1C00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9752 7 266 3.20.20.70
af_A0A1D8PMH6_3_266_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9567 7 261 3.20.20.70
af_B4F800_73_338_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9547 7 264 3.20.20.70
6du1C00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9522 7 266 3.20.20.70
1wxjA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.946 6 268 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7W0NGA0-F1-model_v4 deleted 0.9858 7 267
AF-A0A4Q5TMP9-F1-model_v4 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.9855 6 265 GO:0004834
GO:0005829
GO:0006568
AF-X7YPM9-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9816 23 172 GO:0004834
GO:0005829
GO:0006568
AF-A0A7V8Y1Y0-F1-model_v4 tryptophan synthase (EC 4.2.1.20) 0.9813 7 183 GO:0004834
GO:0005829
GO:0006568
AF-A0A7I7TDX6-F1-model_v4 Tryptophan synthase alpha chain (EC 4.2.1.20) 0.9798 7 267 GO:0004834
GO:0005829
GO:0006568

Feature Viewer

pLDDT pTM Quality
91.87 0.91 High
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Predicted Structure (AlphaFold2)

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