F380282

General Info

Members Datasets Scaffolds Average Seq Length
275 179 550 383

Family's Representative Sequence

Representative Sequence 3300005615|Ga0070702_100154970|Ga0070702_1001549702
Length 382
Sequence MTAVPVQLPVELGVVVEEVRERLADRPGALTAHRVADALRATGRPVGDATVLAVHEELRRDVLGAGPLEPLLRLPGVTDVVVNGTDGVYVDTGEGLRPAEVRFADEAAVRRLAQRLAALGGRRLDDASPFVDVRLADGTRCHALLAPIARPGTLISLRVPRARGFTLTELVAAGAVSVAGERLLRAVVRTGSGKTTLLAALLSLADPAERLVLVEDSHELSPDHPHCVWLEARPPNLEGAGEVTVRSLVRQALRMRPDRLVVGEVRGGEVVDLLAALNTGHEGGCGTLHANSAADVPARVEALALAAGLGREAAHSQLAAAVDVVVHLGIEADGRRRLREVGVPERSDDGMVTIATAVSFDVDGRARPGPGAERLARLLDDP

Samples

Sample ID Description Type Environment
1 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
31 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
32 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
37 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
62 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
63 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
65 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
71 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
72 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
78 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
79 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
82 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
85 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
86 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
87 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
88 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
91 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
92 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
93 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
94 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
104 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
105 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
117 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
128 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
129 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
130 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
144 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
145 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
146 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
147 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
148 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
152 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
153 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
154 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
155 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
156 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
159 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
160 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
161 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
162 2643221561 Nocardioides sp. Root151 Isolate Unclassified
163 2643221576 Nocardioides sp. Root614 Isolate Unclassified
164 2643221590 Nocardioides sp. Root682 Isolate Unclassified
165 2643221604 Nocardioides sp. Root190 Isolate Unclassified
166 2643221615 Nocardioides sp. Root224 Isolate Unclassified
167 2643221617 Nocardioides sp. Root79 Isolate Unclassified
168 2643221620 Nocardioides sp. Root240 Isolate Unclassified
169 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
170 2643221696 Nocardioides sp. Root140 Isolate Unclassified
171 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
172 2738541305 Nocardioides sp. CF167 Isolate Unclassified
173 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
174 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
175 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
176 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
177 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
178 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
179 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 93.45
Metatranscriptomes 0
Isolates 6.55

Biome Distribution

Category Percentage (%)
Aerial Root 0.73
Bulb 0
Endosphere 15.64
Nodule 0
Rhizoplane 8
Rhizosphere 70.18
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070702_100154970 3300005615 Bacteria 1475
2 Ga0070658_10031605 3300005327 Bacteria 4252
3 Ga0070683_100017061 3300005329 Bacteria 6409
4 Ga0070680_100172390 3300005336 Bacteria 1821
5 Ga0070682_100006109 3300005337 Bacteria 6743
6 Ga0070659_100011920 3300005366 Bacteria 6435
7 Ga0070667_100008711 3300005367 Bacteria 8412
8 Ga0070714_100002663 3300005435 Bacteria 13159
9 Ga0070663_100204952 3300005455 Bacteria 1541
10 Ga0070678_100095306 3300005456 Bacteria 2293
11 Ga0070681_10103570 3300005458 Bacteria 2790
12 Ga0070681_10210974 3300005458 Bacteria 1858
13 Ga0070707_100257763 3300005468 Bacteria 1697
14 Ga0070698_100001448 3300005471 Bacteria 26337
15 Ga0070679_100018559 3300005530 Bacteria 6752
16 Ga0070679_100332810 3300005530 Bacteria 1467
17 Ga0070684_100001778 3300005535 Bacteria 15736
18 Ga0068855_100003146 3300005563 Bacteria 20192
19 Ga0068855_100124958 3300005563 Bacteria 2942
20 Ga0070664_100027901 3300005564 Bacteria 4695
21 Ga0068864_100017500 3300005618 Bacteria 5976
22 Ga0068866_10103663 3300005718 Bacteria 1574
23 Ga0068860_100000779 3300005843 Bacteria 35851
24 Ga0081455_10007673 3300005937 Bacteria 11326
25 Ga0081455_10089428 3300005937 Bacteria 2499
26 Ga0081538_10013397 3300005981 Bacteria 6495
27 Ga0081539_10014688 3300005985 Bacteria 5761
28 Ga0075365_10022795 3300006038 Bacteria 3928
29 Ga0075365_10024127 3300006038 Bacteria 3832
30 Ga0075365_10024734 3300006038 Bacteria 3793
31 Ga0075365_10028903 3300006038 Bacteria 3538
32 Ga0075365_10060263 3300006038 Bacteria 2531
33 Ga0075365_10069551 3300006038 Bacteria 2366
34 Ga0075365_10074241 3300006038 Bacteria 2293
35 Ga0075365_10107532 3300006038 Bacteria 1915
36 Ga0075365_10152220 3300006038 Bacteria 1609
37 Ga0075368_10006697 3300006042 Bacteria 4042
38 Ga0075368_10015092 3300006042 Bacteria 2860
39 Ga0075368_10020291 3300006042 Bacteria 2515
40 Ga0075363_100003277 3300006048 Bacteria 6851
41 Ga0075363_100034294 3300006048 Bacteria 2649
42 Ga0075363_100056793 3300006048 Bacteria 2099
43 Ga0075364_10045436 3300006051 Bacteria 2859
44 Ga0075364_10048561 3300006051 Bacteria 2766
45 Ga0075364_10063236 3300006051 Bacteria 2429
46 Ga0075362_10024275 3300006177 Bacteria 2571
47 Ga0075367_10033206 3300006178 Bacteria 2973
48 Ga0075367_10099240 3300006178 Bacteria 1779
49 Ga0075370_10003129 3300006353 Bacteria 7814
50 Ga0075430_100106401 3300006846 Bacteria 2340
51 Ga0075431_100003095 3300006847 Bacteria 16105
52 Ga0105245_10017195 3300009098 Bacteria 6309
53 Ga0105243_10024355 3300009148 Bacteria 4616
54 Ga0105237_10193172 3300009545 Bacteria 2035
55 Ga0105238_10216003 3300009551 Bacteria 1894
56 Ga0105249_10052684 3300009553 Bacteria 3717
57 Ga0105249_10185260 3300009553 Bacteria 2028
58 Ga0105249_10271908 3300009553 Bacteria 1688
59 Ga0105239_10009298 3300010375 Bacteria 11109
60 Ga0105246_10002099 3300011119 Bacteria 12017
61 Ga0157369_10004080 3300013105 Bacteria 17283
62 Ga0157369_10048624 3300013105 Bacteria 4602
63 Ga0163162_10018187 3300013306 Bacteria 6883
64 Ga0157372_10001247 3300013307 Bacteria 27513
65 Ga0157375_10212557 3300013308 Bacteria 2092
66 Ga0157375_10455122 3300013308 Bacteria 1445
67 Ga0163161_10081383 3300017792 Bacteria 2384
68 Ga0207688_10011778 3300025901 Bacteria 4758
69 Ga0207705_10052767 3300025909 Bacteria 2928
70 Ga0207662_10040679 3300025918 Bacteria 2734
71 Ga0207646_10218685 3300025922 Bacteria 1721
72 Ga0207687_10097719 3300025927 Bacteria 2155
73 Ga0207664_10022422 3300025929 Bacteria 4715
74 Ga0207690_10068809 3300025932 Bacteria 2434
75 Ga0207690_10153123 3300025932 Bacteria 1711
76 Ga0207706_10174840 3300025933 Bacteria 1886
77 Ga0207709_10087350 3300025935 Bacteria 2027
78 Ga0207661_10086925 3300025944 Bacteria 2595
79 Ga0207661_10162883 3300025944 Bacteria 1936
80 Ga0207667_10007399 3300025949 Bacteria 13207
81 Ga0207667_10067591 3300025949 Bacteria 3722
82 Ga0207712_10115687 3300025961 Bacteria 2019
83 Ga0207658_10029585 3300025986 Bacteria 3870
84 Ga0207678_10148158 3300026067 Bacteria 2003
85 Ga0207674_10031196 3300026116 Bacteria 5601
86 Ga0207683_10122568 3300026121 Bacteria 2335
87 Ga0209813_10002283 3300027866 Bacteria 4381
88 Ga0207428_10003673 3300027907 Bacteria 14782
89 Ga0268264_10000478 3300028381 Bacteria 53545
90 Ga0268264_10178737 3300028381 Bacteria 1925
91 Ga0265325_10012614 3300031241 Bacteria 4828
92 Ga0265325_10038009 3300031241 Bacteria 2542
93 Ga0265340_10032602 3300031247 Bacteria 2599
94 Ga0265339_10009851 3300031249 Bacteria 5968
95 Ga0307513_10178674 3300031456 Bacteria 1989
96 Ga0265314_10033134 3300031711 Bacteria 3792
97 Ga0265342_10018598 3300031712 Bacteria 4496
98 Ga0316576_10000050 3300031727 Bacteria 37008
99 Ga0316577_10013982 3300031733 Bacteria 4401
100 Ga0307413_10029845 3300031824 Bacteria 3057
101 Ga0307412_10260421 3300031911 Bacteria 1352
102 Ga0307409_100116039 3300031995 Bacteria 2256
103 Ga0307416_100011595 3300032002 Bacteria 5889
104 Ga0307415_100023680 3300032126 Bacteria 3818
105 Ga0316580_10029272 3300032139 Bacteria 1703
106 Ga0316574_0014253 3300035398 Bacteria 4587
107 Ga0395899_0024708 3300037312 Bacteria 4542
108 Ga0395898_0137983 3300037466 Bacteria 2335
109 Ga0395905_0325157 3300037471 Bacteria 1428
110 Ga0316581_0001466 3300037588 Bacteria 5324
111 Ga0395901_0024695 3300038443 Bacteria 6171
112 Ga0395901_0083873 3300038443 Bacteria 3331
113 Ga0395901_0131850 3300038443 Bacteria 2626
114 Ga0395901_0346661 3300038443 Bacteria 1533
115 Ga0439447_019282 3300041407 Bacteria 1821
116 Ga0439445_0028262 3300042004 Bacteria 1445
117 Ga0450907_006032 3300042146 Bacteria 2033
118 Ga0439446_0054888 3300042156 Bacteria 1195
119 Ga0439434_0008128 3300042435 Bacteria 3076
120 Ga0466969_0066263 3300044656 Bacteria 1744
121 Ga0466965_0040442 3300044683 Bacteria 2295
122 Ga0466961_0055914 3300044693 Bacteria 2515
123 Ga0466963_0010580 3300044694 Bacteria 5591
124 Ga0466963_0016969 3300044694 Bacteria 4536
125 Ga0466964_0007398 3300044706 Bacteria 4107
126 Ga0466964_0059060 3300044706 Bacteria 1592
127 Ga0466970_0009281 3300044765 Bacteria 4967
128 Ga0466970_0009408 3300044765 Bacteria 4939
129 Ga0466970_0023080 3300044765 Bacteria 3248
130 Ga0466970_0193998 3300044765 Bacteria 1129
131 Ga0466960_0013549 3300044901 Bacteria 3468
132 Ga0466960_0123899 3300044901 Bacteria 1356
133 Ga0466959_0003826 3300045049 Bacteria 9982
134 Ga0466967_0013114 3300045976 Bacteria 6384
135 Ga0466967_0013803 3300045976 Bacteria 6261
136 Ga0466967_0046364 3300045976 Bacteria 3784
137 Ga0466967_0104439 3300045976 Bacteria 2594
138 Ga0466967_0148827 3300045976 Bacteria 2186
139 Ga0466967_0188531 3300045976 Bacteria 1948
140 Ga0466967_0389986 3300045976 Bacteria 1354
141 Ga0496100_0123646 3300048903 Bacteria 1814
142 Ga0496100_0254900 3300048903 Bacteria 1299
143 Ga0496102_0003189 3300048905 Bacteria 13909
144 Ga0496103_0055219 3300048906 Bacteria 2463
145 Ga0496104_0081416 3300048907 Bacteria 3088
146 Ga0496105_0201520 3300048908 Bacteria 1624
147 Ga0496107_0057604 3300048910 Bacteria 2809
148 Ga0496107_0144110 3300048910 Bacteria 1761
149 Ga0496108_0150586 3300048911 Bacteria 2007
150 Ga0496109_0025979 3300048912 Bacteria 5219
151 Ga0496110_0056115 3300048913 Bacteria 3466
152 Ga0496110_0327922 3300048913 Bacteria 1394
153 Ga0496111_0015716 3300048914 Bacteria 5203
154 Ga0496111_0080038 3300048914 Bacteria 2384
155 Ga0496111_0143993 3300048914 Bacteria 1766
156 Ga0496111_0224960 3300048914 Bacteria 1394
157 Ga0496113_0095463 3300048916 Bacteria 2298
158 Ga0496114_0002916 3300048917 Bacteria 13112
159 Ga0496114_0039622 3300048917 Bacteria 3899
160 Ga0496114_0272586 3300048917 Bacteria 1491
161 Ga0496115_0005071 3300048918 Bacteria 9576
162 Ga0496115_0028634 3300048918 Bacteria 4368
163 Ga0501031_0005711 3300049568 Bacteria 8110
164 Ga0501032_0003384 3300049569 Bacteria 12234
165 Ga0501033_0000584 3300049570 Bacteria 33796
166 Ga0501033_0019377 3300049570 Bacteria 5145
167 Ga0501034_0011643 3300049571 Bacteria 9105
168 Ga0501034_0118102 3300049571 Bacteria 2639
169 Ga0501034_0353315 3300049571 Bacteria 1398
170 Ga0501036_0000585 3300049572 Bacteria 26362
171 Ga0501036_0002529 3300049572 Bacteria 14358
172 Ga0501036_0005568 3300049572 Bacteria 10218
173 Ga0501037_0001903 3300049573 Bacteria 15162
174 Ga0501037_0041127 3300049573 Bacteria 3400
175 Ga0501038_0003237 3300049574 Bacteria 15172
176 Ga0501038_0017534 3300049574 Bacteria 6472
177 Ga0501038_0057551 3300049574 Bacteria 3337
178 Ga0501039_0007207 3300049575 Bacteria 8477
179 Ga0501039_0024940 3300049575 Bacteria 4594
180 Ga0501039_0100873 3300049575 Bacteria 2253
181 Ga0501039_0120205 3300049575 Bacteria 2058
182 Ga0501040_0002746 3300049576 Bacteria 11337
183 Ga0501041_0003546 3300049577 Bacteria 8976
184 Ga0501042_0001014 3300049578 Bacteria 15979
185 Ga0501043_0007179 3300049579 Bacteria 8853
186 Ga0501046_0000356 3300049580 Bacteria 46124
187 Ga0501047_0040941 3300049581 Bacteria 4479
188 Ga0501047_0046427 3300049581 Bacteria 4197
189 Ga0501048_0004984 3300049582 Bacteria 10129
190 Ga0501067_0000588 3300049583 Bacteria 19588
191 Ga0501067_0001262 3300049583 Bacteria 13752
192 Ga0501067_0049029 3300049583 Bacteria 2341
193 Ga0501068_0014104 3300049584 Bacteria 4562
194 Ga0501068_0072237 3300049584 Bacteria 2107
195 Ga0501068_0077778 3300049584 Bacteria 2032
196 Ga0501069_0009247 3300049585 Bacteria 5202
197 Ga0501069_0064289 3300049585 Bacteria 2051
198 Ga0501069_0072476 3300049585 Bacteria 1931
199 Ga0501070_0001374 3300049586 Bacteria 21761
200 Ga0501070_0009856 3300049586 Bacteria 8077
201 Ga0501070_0013713 3300049586 Bacteria 6824
202 Ga0501070_0014118 3300049586 Bacteria 6723
203 Ga0501071_0005804 3300049587 Bacteria 7973
204 Ga0501072_0004073 3300049588 Bacteria 11063
205 Ga0501072_0299234 3300049588 Bacteria 1279
206 Ga0501073_0005761 3300049589 Bacteria 9262
207 Ga0501074_0006802 3300049590 Bacteria 8257
208 Ga0501074_0034472 3300049590 Bacteria 3669
209 Ga0501074_0039669 3300049590 Bacteria 3410
210 Ga0501074_0115950 3300049590 Bacteria 1916
211 Ga0501076_0003185 3300049592 Bacteria 11450
212 Ga0501077_0001967 3300049593 Bacteria 12418
213 Ga0501077_0052954 3300049593 Bacteria 2576
214 Ga0501079_0010928 3300049741 Bacteria 6916
215 Ga0501079_0038850 3300049741 Bacteria 3671
216 Ga0501080_0005935 3300049742 Bacteria 10946
217 Ga0501080_0046292 3300049742 Bacteria 4050
218 Ga0501080_0076399 3300049742 Bacteria 3115
219 Ga0501080_0275503 3300049742 Bacteria 1530
220 Ga0501081_0006102 3300049743 Bacteria 7812
221 Ga0501083_0002890 3300049744 Bacteria 11885
222 Ga0501035_0007810 3300049822 Bacteria 9995
223 Ga0501035_0015174 3300049822 Bacteria 7110
224 Ga0501044_0006386 3300049823 Bacteria 13037
225 Ga0501044_0019775 3300049823 Bacteria 7193
226 Ga0501045_0009392 3300049824 Bacteria 6840
227 Ga0501045_0223340 3300049824 Bacteria 1402
228 nmdc:mga03n38_11135_c1 3300050490 Bacteria 3340
229 nmdc:mga03n38_44564_c1 3300050490 Bacteria 1949
230 nmdc:mga03n38_8507_c1 3300050490 Bacteria 3687
231 nmdc:mga00v17_18077_c1 3300050491 Bacteria 4001
232 nmdc:mga00v17_37573_c1 3300050491 Bacteria 2893
233 nmdc:mga0yw44_11284_c1 3300050492 Bacteria 4606
234 nmdc:mga0yw44_15183_c1 3300050492 Bacteria 4116
235 nmdc:mga0yw44_25115_c1 3300050492 Bacteria 3383
236 nmdc:mga0yw44_32672_c1 3300050492 Bacteria 3035
237 nmdc:mga0yw44_40784_c1 3300050492 Bacteria 2760
238 nmdc:mga0yw44_6423_c1 3300050492 Bacteria 5679
239 nmdc:mga06z11_16818_c1 3300050494 Bacteria 3305
240 nmdc:mga04h51_1759_c1 3300050495 Bacteria 5070
241 nmdc:mga04h51_19210_c1 3300050495 Bacteria 2023
242 nmdc:mga07m45_16702_c1 3300050496 Bacteria 3931
243 nmdc:mga07m45_5532_c1 3300050496 Bacteria 6300
244 nmdc:mga05p37_33651_c1 3300050507 Bacteria 6278
245 nmdc:mga09592_337622_c1 3300050508 Bacteria 1304
246 nmdc:mga09592_572_c1 3300050508 Bacteria 27956
247 nmdc:mga0qj67_356485_c1 3300050509 Bacteria 1182
248 nmdc:mga06r32_160_c1 3300050510 Bacteria 51919
249 nmdc:mga08y16_1031_c1 3300050511 Bacteria 27337
250 Ga0495655_0003140 3300053083 Bacteria 2695
251 Ga0500643_014473 3300053087 Bacteria 2740
252 Ga0500644_0000181 3300053088 Bacteria 40245
253 Ga0500556_0002354 3300053104 Bacteria 6142
254 Ga0500593_003079 3300053117 Bacteria 6237
255 Ga0501084_0270668 3300054114 Bacteria 1434
256 Ga0501082_0185715 3300060353 Bacteria 1809
257 Ga0530510_0198480 3300061734 Bacteria 1490
258 2643824846 2643221561 Bacteria 4984412
259 2643892597 2643221576 Bacteria 5214352
260 2643962046 2643221590 Bacteria 5214697
261 2644034787 2643221604 Bacteria 5014917
262 2644093278 2643221615 Bacteria 5487866
263 2644098755 2643221617 Bacteria 5139111
264 2644116116 2643221620 Bacteria 5134593
265 2644322889 2643221657 Bacteria 5490246
266 2644532603 2643221696 Bacteria 5431823
267 2731907317 2731639228 Bacteria 4187555
268 2738871986 2738541305 Bacteria 4910150
269 2812329971 2811994874 Bacteria 5367947
270 2812348240 2811994878 Bacteria 5992952
271 2816422814 2816332119 Bacteria 8120218
272 2855390087 2855386786 Bacteria 4752232
273 2857484959 2857481737 Bacteria 4761446
274 2984578691 2984576629 Bacteria 4248407
275 2990260711 2990256926 Bacteria 4252839
276 Ga0070702_100154970
277 Ga0070658_10031605
278 Ga0070683_100017061
279 Ga0070680_100172390
280 Ga0070682_100006109
281 Ga0070659_100011920
282 Ga0070667_100008711
283 Ga0070714_100002663
284 Ga0070663_100204952
285 Ga0070678_100095306
286 Ga0070681_10103570
287 Ga0070681_10210974
288 Ga0070707_100257763
289 Ga0070698_100001448
290 Ga0070679_100018559
291 Ga0070679_100332810
292 Ga0070684_100001778
293 Ga0068855_100003146
294 Ga0068855_100124958
295 Ga0070664_100027901
296 Ga0068864_100017500
297 Ga0068866_10103663
298 Ga0068860_100000779
299 Ga0081455_10007673
300 Ga0081455_10089428
301 Ga0081538_10013397
302 Ga0081539_10014688
303 Ga0075365_10022795
304 Ga0075365_10024127
305 Ga0075365_10024734
306 Ga0075365_10028903
307 Ga0075365_10060263
308 Ga0075365_10069551
309 Ga0075365_10074241
310 Ga0075365_10107532
311 Ga0075365_10152220
312 Ga0075368_10006697
313 Ga0075368_10015092
314 Ga0075368_10020291
315 Ga0075363_100003277
316 Ga0075363_100034294
317 Ga0075363_100056793
318 Ga0075364_10045436
319 Ga0075364_10048561
320 Ga0075364_10063236
321 Ga0075362_10024275
322 Ga0075367_10033206
323 Ga0075367_10099240
324 Ga0075370_10003129
325 Ga0075430_100106401
326 Ga0075431_100003095
327 Ga0105245_10017195
328 Ga0105243_10024355
329 Ga0105237_10193172
330 Ga0105238_10216003
331 Ga0105249_10052684
332 Ga0105249_10185260
333 Ga0105249_10271908
334 Ga0105239_10009298
335 Ga0105246_10002099
336 Ga0157369_10004080
337 Ga0157369_10048624
338 Ga0163162_10018187
339 Ga0157372_10001247
340 Ga0157375_10212557
341 Ga0157375_10455122
342 Ga0163161_10081383
343 Ga0207688_10011778
344 Ga0207705_10052767
345 Ga0207662_10040679
346 Ga0207646_10218685
347 Ga0207687_10097719
348 Ga0207664_10022422
349 Ga0207690_10068809
350 Ga0207690_10153123
351 Ga0207706_10174840
352 Ga0207709_10087350
353 Ga0207661_10086925
354 Ga0207661_10162883
355 Ga0207667_10007399
356 Ga0207667_10067591
357 Ga0207712_10115687
358 Ga0207658_10029585
359 Ga0207678_10148158
360 Ga0207674_10031196
361 Ga0207683_10122568
362 Ga0209813_10002283
363 Ga0207428_10003673
364 Ga0268264_10000478
365 Ga0268264_10178737
366 Ga0265325_10012614
367 Ga0265325_10038009
368 Ga0265340_10032602
369 Ga0265339_10009851
370 Ga0307513_10178674
371 Ga0265314_10033134
372 Ga0265342_10018598
373 Ga0316576_10000050
374 Ga0316577_10013982
375 Ga0307413_10029845
376 Ga0307412_10260421
377 Ga0307409_100116039
378 Ga0307416_100011595
379 Ga0307415_100023680
380 Ga0316580_10029272
381 Ga0316574_0014253
382 Ga0395899_0024708
383 Ga0395898_0137983
384 Ga0395905_0325157
385 Ga0316581_0001466
386 Ga0395901_0024695
387 Ga0395901_0083873
388 Ga0395901_0131850
389 Ga0395901_0346661
390 Ga0439447_019282
391 Ga0439445_0028262
392 Ga0450907_006032
393 Ga0439446_0054888
394 Ga0439434_0008128
395 Ga0466969_0066263
396 Ga0466965_0040442
397 Ga0466961_0055914
398 Ga0466963_0010580
399 Ga0466963_0016969
400 Ga0466964_0007398
401 Ga0466964_0059060
402 Ga0466970_0009281
403 Ga0466970_0009408
404 Ga0466970_0023080
405 Ga0466970_0193998
406 Ga0466960_0013549
407 Ga0466960_0123899
408 Ga0466959_0003826
409 Ga0466967_0013114
410 Ga0466967_0013803
411 Ga0466967_0046364
412 Ga0466967_0104439
413 Ga0466967_0148827
414 Ga0466967_0188531
415 Ga0466967_0389986
416 Ga0496100_0123646
417 Ga0496100_0254900
418 Ga0496102_0003189
419 Ga0496103_0055219
420 Ga0496104_0081416
421 Ga0496105_0201520
422 Ga0496107_0057604
423 Ga0496107_0144110
424 Ga0496108_0150586
425 Ga0496109_0025979
426 Ga0496110_0056115
427 Ga0496110_0327922
428 Ga0496111_0015716
429 Ga0496111_0080038
430 Ga0496111_0143993
431 Ga0496111_0224960
432 Ga0496113_0095463
433 Ga0496114_0002916
434 Ga0496114_0039622
435 Ga0496114_0272586
436 Ga0496115_0005071
437 Ga0496115_0028634
438 Ga0501031_0005711
439 Ga0501032_0003384
440 Ga0501033_0000584
441 Ga0501033_0019377
442 Ga0501034_0011643
443 Ga0501034_0118102
444 Ga0501034_0353315
445 Ga0501036_0000585
446 Ga0501036_0002529
447 Ga0501036_0005568
448 Ga0501037_0001903
449 Ga0501037_0041127
450 Ga0501038_0003237
451 Ga0501038_0017534
452 Ga0501038_0057551
453 Ga0501039_0007207
454 Ga0501039_0024940
455 Ga0501039_0100873
456 Ga0501039_0120205
457 Ga0501040_0002746
458 Ga0501041_0003546
459 Ga0501042_0001014
460 Ga0501043_0007179
461 Ga0501046_0000356
462 Ga0501047_0040941
463 Ga0501047_0046427
464 Ga0501048_0004984
465 Ga0501067_0000588
466 Ga0501067_0001262
467 Ga0501067_0049029
468 Ga0501068_0014104
469 Ga0501068_0072237
470 Ga0501068_0077778
471 Ga0501069_0009247
472 Ga0501069_0064289
473 Ga0501069_0072476
474 Ga0501070_0001374
475 Ga0501070_0009856
476 Ga0501070_0013713
477 Ga0501070_0014118
478 Ga0501071_0005804
479 Ga0501072_0004073
480 Ga0501072_0299234
481 Ga0501073_0005761
482 Ga0501074_0006802
483 Ga0501074_0034472
484 Ga0501074_0039669
485 Ga0501074_0115950
486 Ga0501076_0003185
487 Ga0501077_0001967
488 Ga0501077_0052954
489 Ga0501079_0010928
490 Ga0501079_0038850
491 Ga0501080_0005935
492 Ga0501080_0046292
493 Ga0501080_0076399
494 Ga0501080_0275503
495 Ga0501081_0006102
496 Ga0501083_0002890
497 Ga0501035_0007810
498 Ga0501035_0015174
499 Ga0501044_0006386
500 Ga0501044_0019775
501 Ga0501045_0009392
502 Ga0501045_0223340
503 nmdc:mga03n38_11135_c1
504 nmdc:mga03n38_44564_c1
505 nmdc:mga03n38_8507_c1
506 nmdc:mga00v17_18077_c1
507 nmdc:mga00v17_37573_c1
508 nmdc:mga0yw44_11284_c1
509 nmdc:mga0yw44_15183_c1
510 nmdc:mga0yw44_25115_c1
511 nmdc:mga0yw44_32672_c1
512 nmdc:mga0yw44_40784_c1
513 nmdc:mga0yw44_6423_c1
514 nmdc:mga06z11_16818_c1
515 nmdc:mga04h51_1759_c1
516 nmdc:mga04h51_19210_c1
517 nmdc:mga07m45_16702_c1
518 nmdc:mga07m45_5532_c1
519 nmdc:mga05p37_33651_c1
520 nmdc:mga09592_337622_c1
521 nmdc:mga09592_572_c1
522 nmdc:mga0qj67_356485_c1
523 nmdc:mga06r32_160_c1
524 nmdc:mga08y16_1031_c1
525 Ga0495655_0003140
526 Ga0500643_014473
527 Ga0500644_0000181
528 Ga0500556_0002354
529 Ga0500593_003079
530 Ga0501084_0270668
531 Ga0501082_0185715
532 Ga0530510_0198480
533 2643824846
534 2643892597
535 2643962046
536 2644034787
537 2644093278
538 2644098755
539 2644116116
540 2644322889
541 2644532603
542 2731907317
543 2738871986
544 2812329971
545 2812348240
546 2816422814
547 2855390087
548 2857484959
549 2984578691
550 2990260711

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00437

T2SSE

Type II/IV secretion system protein

64

332

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bge-assembly1.cif.gz_A helicobacter pylori atpase, hp0525, in complex with 1g2 compound 0.7948 40 345
1nlz-assembly1.cif.gz_E crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.7916 50 345
1nlz-assembly1.cif.gz_C crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.7811 51 348
1nlz-assembly1.cif.gz_C crystal structure of unliganded traffic atpase of the type iv secretion system of helicobacter pylori 0.7761 51 348
2eyu-assembly2.cif.gz_B the crystal structure of the c-terminal domain of aquifex aeolicus pilt 0.7727 178 347
ID Description Score Start End Superfamily
af_P9WMT3_116_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9726 149 356 3.40.50.300
af_P9WMT3_116_327_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9456 149 356 3.40.50.300
af_P9WMT3_2_115_3.30.450.370 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9232 38 144 3.30.450.370
af_Q58191_267_406_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9025 155 285 3.40.50.300
4ii7D01 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.899 57 150 3.30.450.370
ID Description Score Start End GO Terms
AF-A0A526YIQ7-F1-model_v4 CpaF family protein 0.9796 167 312 GO:0016887
AF-A0A7Z6RIF8-F1-model_v4 deleted 0.9775 176 382
AF-A0A8B0E1K5-F1-model_v4 deleted 0.9765 183 382
AF-A0A1N0QH33-F1-model_v4 deleted 0.9748 155 383
AF-A0A399P4I5-F1-model_v4 Type II/type IV pathway secretion protein 0.9733 155 306 GO:0016887

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