F380239

General Info

Members Datasets Scaffolds Average Seq Length
275 169 550 374

Family's Representative Sequence

Representative Sequence 3300005456|Ga0070678_100181779|Ga0070678_1001817791
Length 440
Sequence VSTSAASSPTGAVDDAAAWPGVPAPRATGTASDDAPASKAPFQVRAEAVIDTDAIADNTRLLIARLRRQQRNANLMAVVKADGYGHGAVESARAALRGGAASLGVATPTEALQLRAAGIDAPVLAWLWPAGEEIRPALMAGVELGISSLAHLDAVLTAAGETRPKVHLKIDTGLGRNGVGPAELDAMLLALAAAQDNGWVEVAGLMSHLASADVPGDPSVAQQTREFREAIVRAELAGVRAGSRHLANTPAVLDHPATYFDLGRCGIGIYGLNPVVTPAGLRPAMTLRGTVALTKRVPAGYGVSYGLTYRTSADTTLALVPLGYADGIPRAASSAGEVLIGVKRRRIAGRVAMDQVVVDCGDDPVQAGDEVIVFGPGDQGEPTADDWARECDTIGYEIVTRIGPRVPRRYVGSTTDTAESATTPAPSYFGHTAIGGDDQQ

Samples

Sample ID Description Type Environment
1 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
11 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
12 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
38 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
39 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
40 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
41 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
42 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
45 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
46 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
47 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
52 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
53 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
56 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
57 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
58 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
59 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
60 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
61 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
64 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
65 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
66 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
67 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
68 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
69 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
70 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
71 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
72 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
73 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
74 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
75 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
76 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
77 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
78 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
79 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
80 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
84 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
85 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
86 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
87 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
88 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
89 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
90 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
91 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
109 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
119 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
120 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
121 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
122 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
123 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
126 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
127 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
128 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
129 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
130 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
131 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
132 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
133 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
134 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
135 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
136 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
137 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
138 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
139 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
140 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
141 2643221566 Microbacterium sp. Root166 Isolate Unclassified
142 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
143 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
144 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
145 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
146 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
147 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
148 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
149 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
150 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
151 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
152 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
153 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
154 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
155 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
156 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
157 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
158 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
159 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
160 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
161 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
162 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
163 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
164 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
165 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
166 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
167 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
168 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
169 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.09
Metatranscriptomes 0
Isolates 10.91

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.91
Nodule 0
Rhizoplane 7.64
Rhizosphere 69.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070678_100181779 3300005456 Bacteria 1722
2 rootH2_10056656 3300003320 Bacteria 7173
3 JGI25407J50210_10008406 3300003373 Bacteria 2602
4 Ga0055542_1013168 3300003762 Bacteria 1401
5 Ga0070658_10242471 3300005327 Bacteria 1528
6 Ga0070682_100057785 3300005337 Bacteria 2445
7 Ga0070660_100258226 3300005339 Bacteria 1422
8 Ga0070668_100057623 3300005347 Bacteria 3003
9 Ga0068857_100190728 3300005577 Bacteria 1867
10 Ga0068851_10119972 3300005834 Bacteria 1412
11 Ga0081538_10000001 3300005981 Bacteria 249890
12 Ga0075367_10027995 3300006178 Bacteria 3211
13 Ga0075370_10047806 3300006353 Bacteria 2423
14 Ga0075428_100000918 3300006844 Bacteria 31110
15 Ga0075428_100141030 3300006844 Bacteria 2621
16 Ga0075434_100127668 3300006871 Bacteria 2560
17 Ga0075429_100005183 3300006880 Bacteria 11207
18 Ga0105244_10038114 3300009036 Bacteria 2508
19 Ga0105240_10010240 3300009093 Bacteria 13196
20 Ga0111539_10036245 3300009094 Bacteria 5965
21 Ga0105245_10160544 3300009098 Bacteria 2132
22 Ga0114129_10000234 3300009147 Bacteria 61922
23 Ga0114129_10000976 3300009147 Bacteria 37436
24 Ga0114129_10006080 3300009147 Bacteria 17111
25 Ga0114129_10022471 3300009147 Bacteria 8953
26 Ga0105241_10003007 3300009174 Bacteria 12602
27 Ga0105237_10332916 3300009545 Bacteria 1522
28 Ga0157372_10230501 3300013307 Bacteria 2147
29 Ga0157380_10010892 3300014326 Bacteria 6556
30 Ga0157380_10058338 3300014326 Bacteria 3077
31 Ga0157380_10349248 3300014326 Bacteria 1383
32 Ga0209148_1001695 3300025254 Bacteria 9779
33 Ga0207655_1028788 3300025728 Bacteria 2613
34 Ga0207645_10099787 3300025907 Bacteria 1872
35 Ga0207654_10000001 3300025911 Bacteria 1816198
36 Ga0207695_10010059 3300025913 Bacteria 11616
37 Ga0207687_10047663 3300025927 Bacteria 2971
38 Ga0207690_10080750 3300025932 Bacteria 2270
39 Ga0207691_10108129 3300025940 Bacteria 2475
40 Ga0207674_10156849 3300026116 Bacteria 2231
41 Ga0207683_10136678 3300026121 Bacteria 2206
42 Ga0207698_10451839 3300026142 Bacteria 1241
43 Ga0307515_10039114 3300028794 Bacteria 7559
44 Ga0307509_10010929 3300031507 Bacteria 11063
45 Ga0307518_10131953 3300031838 Bacteria 1755
46 Ga0307406_10003790 3300031901 Bacteria 8229
47 Ga0307409_100146824 3300031995 Bacteria 2041
48 Ga0316574_0062203 3300035398 Bacteria 2346
49 Ga0436365_1276582 3300039437 Bacteria 3042
50 Ga0451791_0804156 3300041451 Bacteria 2350
51 Ga0451793_0295364 3300041452 Bacteria 4803
52 Ga0439449_0008446 3300042007 Bacteria 3914
53 Ga0439449_0014908 3300042007 Bacteria 2922
54 Ga0466969_0000084 3300044656 Bacteria 48645
55 Ga0466969_0000353 3300044656 Bacteria 25259
56 Ga0466972_0077326 3300044658 Bacteria 1585
57 Ga0466966_0009018 3300044684 Bacteria 6610
58 Ga0466966_0031013 3300044684 Bacteria 3467
59 Ga0466961_0009275 3300044693 Bacteria 6264
60 Ga0466971_0000019 3300044719 Bacteria 79360
61 Ga0466970_0084273 3300044765 Bacteria 1721
62 Ga0466959_0039300 3300045049 Bacteria 3496
63 Ga0466959_0056722 3300045049 Bacteria 2857
64 Ga0495629_0010066 3300046459 Bacteria 6899
65 Ga0495629_0013750 3300046459 Bacteria 5839
66 Ga0495629_0140467 3300046459 Bacteria 1681
67 Ga0495651_0018734 3300046462 Bacteria 5362
68 Ga0495651_0027543 3300046462 Bacteria 4427
69 Ga0495650_0001119 3300046471 Bacteria 29293
70 Ga0495618_0006074 3300046514 Bacteria 7327
71 Ga0495618_0008274 3300046514 Bacteria 6298
72 Ga0495628_0026455 3300046516 Bacteria 4730
73 Ga0495652_0000728 3300046529 Bacteria 38187
74 Ga0495640_0011429 3300046533 Bacteria 6832
75 Ga0495634_0027185 3300046642 Bacteria 3982
76 Ga0495635_0001851 3300046663 Bacteria 14330
77 Ga0495657_0018755 3300046675 Bacteria 5000
78 Ga0495623_0016715 3300046679 Bacteria 4740
79 Ga0495646_0055323 3300046680 Bacteria 2383
80 Ga0495600_0065084 3300046809 Bacteria 2383
81 Ga0495581_0027839 3300047315 Bacteria 3278
82 Ga0495604_0024050 3300047317 Bacteria 4862
83 Ga0495604_0028027 3300047317 Bacteria 4480
84 Ga0495674_0229062 3300047319 Bacteria 1534
85 Ga0495676_0025100 3300047321 Bacteria 5149
86 Ga0495686_0149036 3300047472 Bacteria 1375
87 Ga0495602_0163790 3300048088 Bacteria 1733
88 Ga0496100_0068326 3300048903 Bacteria 2363
89 Ga0496100_0074225 3300048903 Bacteria 2278
90 Ga0496102_0047877 3300048905 Bacteria 3887
91 Ga0496104_0008082 3300048907 Bacteria 9334
92 Ga0496104_0258700 3300048907 Bacteria 1653
93 Ga0496105_0009951 3300048908 Bacteria 7459
94 Ga0496105_0109519 3300048908 Bacteria 2280
95 Ga0496108_0000599 3300048911 Bacteria 28272
96 Ga0496109_0283057 3300048912 Bacteria 1563
97 Ga0496110_0008132 3300048913 Bacteria 8426
98 Ga0496111_0004003 3300048914 Bacteria 9247
99 Ga0496113_0062140 3300048916 Bacteria 2820
100 Ga0496114_0016165 3300048917 Bacteria 6006
101 Ga0496114_0032309 3300048917 Bacteria 4306
102 Ga0496114_0036105 3300048917 Bacteria 4085
103 Ga0496114_0047027 3300048917 Bacteria 3587
104 Ga0496114_0060806 3300048917 Bacteria 3158
105 Ga0496114_0098740 3300048917 Bacteria 2490
106 Ga0496115_0045291 3300048918 Bacteria 3511
107 Ga0496117_0000651 3300048920 Bacteria 55785
108 Ga0496117_0001417 3300048920 Bacteria 34751
109 Ga0496117_0001865 3300048920 Bacteria 28449
110 Ga0496117_0017087 3300048920 Bacteria 6074
111 Ga0496117_0074149 3300048920 Bacteria 2267
112 Ga0496118_0015589 3300048921 Bacteria 7025
113 Ga0496119_0000437 3300048922 Bacteria 57106
114 Ga0496119_0002760 3300048922 Bacteria 18892
115 Ga0496119_0004491 3300048922 Bacteria 13871
116 Ga0496119_0007012 3300048922 Bacteria 10261
117 Ga0496119_0009135 3300048922 Bacteria 8577
118 Ga0496120_0002152 3300048923 Bacteria 20990
119 Ga0496120_0003180 3300048923 Bacteria 15284
120 Ga0496120_0007010 3300048923 Bacteria 8474
121 Ga0496122_0001962 3300048925 Bacteria 30783
122 Ga0496122_0012390 3300048925 Bacteria 8499
123 Ga0496122_0012447 3300048925 Bacteria 8469
124 Ga0496122_0062813 3300048925 Bacteria 2716
125 Ga0496122_0142311 3300048925 Bacteria 1498
126 Ga0496123_0000009 3300048926 Bacteria 509486
127 Ga0496123_0014585 3300048926 Bacteria 6502
128 Ga0496124_0005383 3300048927 Bacteria 14448
129 Ga0496124_0088653 3300048927 Bacteria 2528
130 Ga0496124_0183138 3300048927 Bacteria 1610
131 Ga0496125_0002330 3300048928 Bacteria 24953
132 Ga0496125_0012135 3300048928 Bacteria 8572
133 Ga0496125_0030009 3300048928 Bacteria 4872
134 Ga0496126_0001762 3300048929 Bacteria 32014
135 Ga0496126_0016812 3300048929 Bacteria 7303
136 Ga0496126_0022264 3300048929 Bacteria 6170
137 Ga0496126_0083588 3300048929 Bacteria 2817
138 Ga0501031_0002779 3300049568 Bacteria 11149
139 Ga0501031_0020154 3300049568 Bacteria 4346
140 Ga0501031_0057267 3300049568 Bacteria 2539
141 Ga0501031_0075764 3300049568 Bacteria 2190
142 Ga0501031_0135912 3300049568 Bacteria 1606
143 Ga0501032_0012475 3300049569 Bacteria 6071
144 Ga0501033_0063646 3300049570 Bacteria 2714
145 Ga0501033_0065107 3300049570 Bacteria 2681
146 Ga0501033_0222349 3300049570 Bacteria 1343
147 Ga0501034_0012671 3300049571 Bacteria 8700
148 Ga0501034_0047934 3300049571 Bacteria 4312
149 Ga0501034_0279481 3300049571 Bacteria 1609
150 Ga0501036_0008385 3300049572 Bacteria 8468
151 Ga0501036_0022103 3300049572 Bacteria 5350
152 Ga0501036_0063471 3300049572 Bacteria 3128
153 Ga0501036_0066059 3300049572 Bacteria 3060
154 Ga0501037_0008248 3300049573 Bacteria 7637
155 Ga0501037_0026622 3300049573 Bacteria 4273
156 Ga0501038_0035605 3300049574 Bacteria 4369
157 Ga0501038_0059739 3300049574 Bacteria 3265
158 Ga0501038_0155342 3300049574 Bacteria 1863
159 Ga0501038_0300703 3300049574 Bacteria 1259
160 Ga0501039_0017262 3300049575 Bacteria 5536
161 Ga0501039_0056829 3300049575 Bacteria 3031
162 Ga0501039_0077409 3300049575 Bacteria 2586
163 Ga0501039_0200080 3300049575 Bacteria 1571
164 Ga0501040_0019991 3300049576 Bacteria 4458
165 Ga0501040_0022643 3300049576 Bacteria 4208
166 Ga0501040_0052044 3300049576 Bacteria 2802
167 Ga0501041_0003005 3300049577 Bacteria 9672
168 Ga0501041_0007503 3300049577 Bacteria 6400
169 Ga0501041_0010606 3300049577 Bacteria 5432
170 Ga0501042_0040269 3300049578 Bacteria 3322
171 Ga0501042_0065839 3300049578 Bacteria 2589
172 Ga0501043_0007828 3300049579 Bacteria 8446
173 Ga0501043_0094746 3300049579 Bacteria 2346
174 Ga0501043_0114234 3300049579 Bacteria 2120
175 Ga0501043_0248555 3300049579 Bacteria 1370
176 Ga0501046_0009138 3300049580 Bacteria 8584
177 Ga0501046_0012964 3300049580 Bacteria 7082
178 Ga0501046_0037965 3300049580 Bacteria 3868
179 Ga0501046_0057934 3300049580 Bacteria 3038
180 Ga0501047_0000005 3300049581 Bacteria 456524
181 Ga0501047_0008530 3300049581 Bacteria 9666
182 Ga0501047_0018939 3300049581 Bacteria 6603
183 Ga0501047_0065256 3300049581 Bacteria 3509
184 Ga0501047_0084163 3300049581 Bacteria 3057
185 Ga0501047_0390599 3300049581 Bacteria 1225
186 Ga0501048_0011279 3300049582 Bacteria 6664
187 Ga0501048_0045809 3300049582 Bacteria 3122
188 Ga0501048_0056282 3300049582 Bacteria 2790
189 Ga0501067_0014461 3300049583 Bacteria 4369
190 Ga0501068_0010733 3300049584 Bacteria 5150
191 Ga0501069_0038781 3300049585 Bacteria 2630
192 Ga0501070_0001665 3300049586 Bacteria 19688
193 Ga0501070_0014748 3300049586 Bacteria 6575
194 Ga0501070_0088749 3300049586 Bacteria 2559
195 Ga0501071_0002174 3300049587 Bacteria 11786
196 Ga0501071_0022727 3300049587 Bacteria 4373
197 Ga0501072_0001869 3300049588 Bacteria 15679
198 Ga0501072_0004233 3300049588 Bacteria 10884
199 Ga0501072_0006184 3300049588 Bacteria 9119
200 Ga0501073_0053727 3300049589 Bacteria 2820
201 Ga0501074_0044821 3300049590 Bacteria 3200
202 Ga0501074_0050374 3300049590 Bacteria 3006
203 Ga0501074_0083465 3300049590 Bacteria 2290
204 Ga0501075_0017080 3300049591 Bacteria 5236
205 Ga0501075_0036336 3300049591 Bacteria 3676
206 Ga0501076_0009333 3300049592 Bacteria 7239
207 Ga0501076_0012604 3300049592 Bacteria 6324
208 Ga0501077_0047998 3300049593 Bacteria 2712
209 Ga0501077_0113791 3300049593 Bacteria 1715
210 Ga0501079_0008838 3300049741 Bacteria 7627
211 Ga0501079_0020144 3300049741 Bacteria 5097
212 Ga0501080_0071341 3300049742 Bacteria 3231
213 Ga0501081_0004580 3300049743 Bacteria 8878
214 Ga0501081_0010520 3300049743 Bacteria 6039
215 Ga0501083_0002875 3300049744 Bacteria 11919
216 Ga0501083_0036446 3300049744 Bacteria 3355
217 Ga0501083_0065709 3300049744 Bacteria 2416
218 Ga0501035_0005580 3300049822 Bacteria 11888
219 Ga0501035_0032465 3300049822 Bacteria 4749
220 Ga0501035_0044257 3300049822 Bacteria 4009
221 Ga0501044_0038444 3300049823 Bacteria 4997
222 Ga0501044_0038650 3300049823 Bacteria 4983
223 Ga0501044_0062277 3300049823 Bacteria 3813
224 Ga0501044_0135529 3300049823 Bacteria 2454
225 Ga0501044_0310888 3300049823 Bacteria 1502
226 Ga0501045_0001957 3300049824 Bacteria 13916
227 Ga0501045_0046694 3300049824 Bacteria 3153
228 nmdc:mga00v17_82289_c1 3300050491 Bacteria 2011
229 nmdc:mga0yw44_52433_c1 3300050492 Bacteria 2473
230 nmdc:mga05p37_55152_c1 3300050507 Bacteria 4890
231 nmdc:mga05p37_6430_c1 3300050507 Bacteria 13855
232 nmdc:mga05p37_65377_c1 3300050507 Bacteria 4475
233 nmdc:mga05p37_9536_c1 3300050507 Bacteria 11496
234 nmdc:mga09592_198940_c1 3300050508 Bacteria 1735
235 nmdc:mga0qj67_4731_c1 3300050509 Bacteria 9889
236 nmdc:mga06r32_23420_c1 3300050510 Bacteria 5713
237 nmdc:mga06r32_339072_c1 3300050510 Bacteria 1488
238 nmdc:mga0n895_124174_c1 3300050512 Bacteria 2604
239 Ga0495601_0197600 3300053077 Bacteria 1314
240 Ga0500566_0154842 3300053094 Bacteria 1201
241 Ga0500573_0031571 3300053140 Bacteria 3057
242 Ga0501084_0065527 3300054114 Bacteria 3039
243 Ga0501082_0115043 3300060353 Bacteria 2329
244 Ga0466962_0000628 3300061719 Bacteria 15667
245 Ga0530510_0016733 3300061734 Bacteria 5192
246 2537897618 2537561592 Bacteria 4348607
247 2643847825 2643221566 Bacteria 3460379
248 2747951895 2747842429 Bacteria 3914386
249 2758224706 2757320536 Bacteria 3629334
250 2768643559 2767802112 Bacteria 6465194
251 2774400644 2773857763 Bacteria 4180068
252 2795795407 2795385472 Bacteria 6627535
253 2809226498 2808606447 Bacteria 3572005
254 2833709989 2833709550 Bacteria 4008291
255 2837186075 2837183177 Bacteria 4637169
256 2852632742 2852632344 Bacteria 3463163
257 2852646519 2852646457 Bacteria 3408613
258 2857724640 2857723135 Bacteria 4217853
259 2857738202 2857737099 Bacteria 3104305
260 2861524866 2861520306 Bacteria 8348283
261 2862709694 2862705112 Bacteria 6563286
262 2867349858 2867346516 Bacteria 7608576
263 2870629501 2870628048 Bacteria 3696012
264 2912762170 2912757875 Bacteria 7940295
265 2945970865 2945968032 Bacteria 4111363
266 2946043178 2946041624 Bacteria 4191385
267 2977265606 2977264416 Bacteria 3750737
268 2990044873 2990044586 Bacteria 6603797
269 3006326160 3006321560 Bacteria 8247479
270 3006397790 3006393351 Bacteria 6615579
271 8008490537 8008485437 Bacteria 7198341
272 8016255026 8016254467 Bacteria 3797036
273 8025529839 8025524527 Bacteria 7197316
274 8025532271 8025530807 Bacteria 8495698
275 8045832273 8045830549 Bacteria 4444727
276 Ga0070678_100181779
277 rootH2_10056656
278 JGI25407J50210_10008406
279 Ga0055542_1013168
280 Ga0070658_10242471
281 Ga0070682_100057785
282 Ga0070660_100258226
283 Ga0070668_100057623
284 Ga0068857_100190728
285 Ga0068851_10119972
286 Ga0081538_10000001
287 Ga0075367_10027995
288 Ga0075370_10047806
289 Ga0075428_100000918
290 Ga0075428_100141030
291 Ga0075434_100127668
292 Ga0075429_100005183
293 Ga0105244_10038114
294 Ga0105240_10010240
295 Ga0111539_10036245
296 Ga0105245_10160544
297 Ga0114129_10000234
298 Ga0114129_10000976
299 Ga0114129_10006080
300 Ga0114129_10022471
301 Ga0105241_10003007
302 Ga0105237_10332916
303 Ga0157372_10230501
304 Ga0157380_10010892
305 Ga0157380_10058338
306 Ga0157380_10349248
307 Ga0209148_1001695
308 Ga0207655_1028788
309 Ga0207645_10099787
310 Ga0207654_10000001
311 Ga0207695_10010059
312 Ga0207687_10047663
313 Ga0207690_10080750
314 Ga0207691_10108129
315 Ga0207674_10156849
316 Ga0207683_10136678
317 Ga0207698_10451839
318 Ga0307515_10039114
319 Ga0307509_10010929
320 Ga0307518_10131953
321 Ga0307406_10003790
322 Ga0307409_100146824
323 Ga0316574_0062203
324 Ga0436365_1276582
325 Ga0451791_0804156
326 Ga0451793_0295364
327 Ga0439449_0008446
328 Ga0439449_0014908
329 Ga0466969_0000084
330 Ga0466969_0000353
331 Ga0466972_0077326
332 Ga0466966_0009018
333 Ga0466966_0031013
334 Ga0466961_0009275
335 Ga0466971_0000019
336 Ga0466970_0084273
337 Ga0466959_0039300
338 Ga0466959_0056722
339 Ga0495629_0010066
340 Ga0495629_0013750
341 Ga0495629_0140467
342 Ga0495651_0018734
343 Ga0495651_0027543
344 Ga0495650_0001119
345 Ga0495618_0006074
346 Ga0495618_0008274
347 Ga0495628_0026455
348 Ga0495652_0000728
349 Ga0495640_0011429
350 Ga0495634_0027185
351 Ga0495635_0001851
352 Ga0495657_0018755
353 Ga0495623_0016715
354 Ga0495646_0055323
355 Ga0495600_0065084
356 Ga0495581_0027839
357 Ga0495604_0024050
358 Ga0495604_0028027
359 Ga0495674_0229062
360 Ga0495676_0025100
361 Ga0495686_0149036
362 Ga0495602_0163790
363 Ga0496100_0068326
364 Ga0496100_0074225
365 Ga0496102_0047877
366 Ga0496104_0008082
367 Ga0496104_0258700
368 Ga0496105_0009951
369 Ga0496105_0109519
370 Ga0496108_0000599
371 Ga0496109_0283057
372 Ga0496110_0008132
373 Ga0496111_0004003
374 Ga0496113_0062140
375 Ga0496114_0016165
376 Ga0496114_0032309
377 Ga0496114_0036105
378 Ga0496114_0047027
379 Ga0496114_0060806
380 Ga0496114_0098740
381 Ga0496115_0045291
382 Ga0496117_0000651
383 Ga0496117_0001417
384 Ga0496117_0001865
385 Ga0496117_0017087
386 Ga0496117_0074149
387 Ga0496118_0015589
388 Ga0496119_0000437
389 Ga0496119_0002760
390 Ga0496119_0004491
391 Ga0496119_0007012
392 Ga0496119_0009135
393 Ga0496120_0002152
394 Ga0496120_0003180
395 Ga0496120_0007010
396 Ga0496122_0001962
397 Ga0496122_0012390
398 Ga0496122_0012447
399 Ga0496122_0062813
400 Ga0496122_0142311
401 Ga0496123_0000009
402 Ga0496123_0014585
403 Ga0496124_0005383
404 Ga0496124_0088653
405 Ga0496124_0183138
406 Ga0496125_0002330
407 Ga0496125_0012135
408 Ga0496125_0030009
409 Ga0496126_0001762
410 Ga0496126_0016812
411 Ga0496126_0022264
412 Ga0496126_0083588
413 Ga0501031_0002779
414 Ga0501031_0020154
415 Ga0501031_0057267
416 Ga0501031_0075764
417 Ga0501031_0135912
418 Ga0501032_0012475
419 Ga0501033_0063646
420 Ga0501033_0065107
421 Ga0501033_0222349
422 Ga0501034_0012671
423 Ga0501034_0047934
424 Ga0501034_0279481
425 Ga0501036_0008385
426 Ga0501036_0022103
427 Ga0501036_0063471
428 Ga0501036_0066059
429 Ga0501037_0008248
430 Ga0501037_0026622
431 Ga0501038_0035605
432 Ga0501038_0059739
433 Ga0501038_0155342
434 Ga0501038_0300703
435 Ga0501039_0017262
436 Ga0501039_0056829
437 Ga0501039_0077409
438 Ga0501039_0200080
439 Ga0501040_0019991
440 Ga0501040_0022643
441 Ga0501040_0052044
442 Ga0501041_0003005
443 Ga0501041_0007503
444 Ga0501041_0010606
445 Ga0501042_0040269
446 Ga0501042_0065839
447 Ga0501043_0007828
448 Ga0501043_0094746
449 Ga0501043_0114234
450 Ga0501043_0248555
451 Ga0501046_0009138
452 Ga0501046_0012964
453 Ga0501046_0037965
454 Ga0501046_0057934
455 Ga0501047_0000005
456 Ga0501047_0008530
457 Ga0501047_0018939
458 Ga0501047_0065256
459 Ga0501047_0084163
460 Ga0501047_0390599
461 Ga0501048_0011279
462 Ga0501048_0045809
463 Ga0501048_0056282
464 Ga0501067_0014461
465 Ga0501068_0010733
466 Ga0501069_0038781
467 Ga0501070_0001665
468 Ga0501070_0014748
469 Ga0501070_0088749
470 Ga0501071_0002174
471 Ga0501071_0022727
472 Ga0501072_0001869
473 Ga0501072_0004233
474 Ga0501072_0006184
475 Ga0501073_0053727
476 Ga0501074_0044821
477 Ga0501074_0050374
478 Ga0501074_0083465
479 Ga0501075_0017080
480 Ga0501075_0036336
481 Ga0501076_0009333
482 Ga0501076_0012604
483 Ga0501077_0047998
484 Ga0501077_0113791
485 Ga0501079_0008838
486 Ga0501079_0020144
487 Ga0501080_0071341
488 Ga0501081_0004580
489 Ga0501081_0010520
490 Ga0501083_0002875
491 Ga0501083_0036446
492 Ga0501083_0065709
493 Ga0501035_0005580
494 Ga0501035_0032465
495 Ga0501035_0044257
496 Ga0501044_0038444
497 Ga0501044_0038650
498 Ga0501044_0062277
499 Ga0501044_0135529
500 Ga0501044_0310888
501 Ga0501045_0001957
502 Ga0501045_0046694
503 nmdc:mga00v17_82289_c1
504 nmdc:mga0yw44_52433_c1
505 nmdc:mga05p37_55152_c1
506 nmdc:mga05p37_6430_c1
507 nmdc:mga05p37_65377_c1
508 nmdc:mga05p37_9536_c1
509 nmdc:mga09592_198940_c1
510 nmdc:mga0qj67_4731_c1
511 nmdc:mga06r32_23420_c1
512 nmdc:mga06r32_339072_c1
513 nmdc:mga0n895_124174_c1
514 Ga0495601_0197600
515 Ga0500566_0154842
516 Ga0500573_0031571
517 Ga0501084_0065527
518 Ga0501082_0115043
519 Ga0466962_0000628
520 Ga0530510_0016733
521 2537897618
522 2643847825
523 2747951895
524 2758224706
525 2768643559
526 2774400644
527 2795795407
528 2809226498
529 2833709989
530 2837186075
531 2852632742
532 2852646519
533 2857724640
534 2857738202
535 2861524866
536 2862709694
537 2867349858
538 2870629501
539 2912762170
540 2945970865
541 2946043178
542 2977265606
543 2990044873
544 3006326160
545 3006397790
546 8008490537
547 8016255026
548 8025529839
549 8025532271
550 8045832273

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00842

Ala_racemase_C

Alanine racemase, C-terminal domain

284

410

0.97

PF01168

Ala_racemase_N

Alanine racemase, N-terminal domain

50

274

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vfh-assembly1.cif.gz_A crystal structure of alanine racemase from d-cycloserine producing streptomyces lavendulae 0.9871 8 386
8b8h-assembly1.cif.gz_B structure of dcs-resistant variant d322n of alanine racemase from m. tuberculosis in complex with dcs 0.9773 10 385
5faj-assembly1.cif.gz_A alanine racemase from streptomyces coelicolor a3(2) in complex with d-cycloserine 0.9727 11 386
1xfc-assembly1.cif.gz_B the 1.9 a crystal structure of alanine racemase from mycobacterium tuberculosis contains a conserved entryway into the active site 0.9713 12 385
8b8h-assembly1.cif.gz_A structure of dcs-resistant variant d322n of alanine racemase from m. tuberculosis in complex with dcs 0.9709 12 385
ID Description Score Start End Superfamily
1vftA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9888 19 232 3.20.20.10
1xfcA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9785 19 232 3.20.20.10
1vftA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9752 19 232 3.20.20.10
1xfcA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Alanine racemase 0.9649 19 232 3.20.20.10
1xfcA01 Mainly Beta;Beta Barrel;Lyase, Ornithine Decarboxylase; Chain A, domain 1;Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.9618 254 384 2.40.37.10
ID Description Score Start End GO Terms
AF-A0A2S8MRC6-F1-model_v4 deleted 0.9862 46 169
AF-A0A1H7KYE7-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9829 26 386 GO:0005829
GO:0008784
GO:0009252
GO:0030170
GO:0030632
AF-A0A4R9BD49-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9827 8 386 GO:0005829
GO:0008784
GO:0009252
GO:0030170
GO:0030632
AF-A0A3S3ZWF0-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9788 12 386 GO:0005829
GO:0008784
GO:0009252
GO:0030170
GO:0030632
AF-A0A444QCF8-F1-model_v4 Alanine racemase (EC 5.1.1.1) 0.9775 8 386 GO:0005829
GO:0008784
GO:0009252
GO:0030170
GO:0030632

Map