F380141

General Info

Members Datasets Scaffolds Average Seq Length
275 203 550 251

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10301074|rootH2_103010742
Length 293
Sequence MCVRALACPCISKERRRASRRLPVLRTGVSDKQIRGEERISMPMTTERSSDMTDAEWQTRCDLAALYRIVNHFGWTDLLQTHMSARVPGEPNTFVINRLGDMFDEICASNLVKMDLDGNVIGDPARFNKAGFTIHSGIYRARPDANCIMHTHTRAGAGISLLRNGLRPISQDALHVIDDVVYHEYGIPATQEECDALGRSCQKGTSVVLLNHGLLTFGHTIHGALERLYLLERACEVELIARTLDEPPVMIAEHIVQHAAVRMKKMRGSDEFGMLDWQALLRLINRSGEDYRR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
55 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
69 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
71 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
72 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
77 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
78 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
79 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
113 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
114 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
115 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
116 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
117 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
129 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
130 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
133 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
137 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
138 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
139 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
140 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
141 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
142 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
143 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
144 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
145 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
146 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
147 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
148 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
149 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
150 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
151 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
159 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
160 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
166 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
167 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
168 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
172 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
173 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
174 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
175 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
176 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
177 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
178 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
179 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
180 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
181 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300059490 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 7R_CD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300059491 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 12R_AW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
184 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
185 3300059503 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 21R_SD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
187 3300059506 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 52R_CW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300059627 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 154R_AW_T3_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300059642 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 10R_AW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
195 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
196 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 3300059645 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 18R_SW_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
198 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
199 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
200 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
201 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
202 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
203 2935916978 Bradyrhizobium sp. F1.13.3 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.55
Metatranscriptomes 12
Isolates 1.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.91
Nodule 1.09
Rhizoplane 0.73
Rhizosphere 86.55
Stem 0
Stem Tuber 0
Unclassified 2.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10301074 3300003320 Unclassified 1685
2 JGI25406J46586_10042666 3300003203 Bacteria 1585
3 Ga0058862_11889600 3300004803 Bacteria 1513
4 Ga0058862_12301102 3300004803 Bacteria 1017
5 Ga0070658_10007924 3300005327 Bacteria 8552
6 Ga0070676_10212883 3300005328 Bacteria 1273
7 Ga0070690_100051218 3300005330 Bacteria 2635
8 Ga0070680_100000215 3300005336 Bacteria 38142
9 Ga0070680_100026062 3300005336 Bacteria 4675
10 Ga0070660_100594710 3300005339 Bacteria 925
11 Ga0070691_10043755 3300005341 Bacteria 2122
12 Ga0070687_100451951 3300005343 Bacteria 855
13 Ga0070675_100415735 3300005354 Bacteria 1202
14 Ga0070671_100270043 3300005355 Bacteria 1446
15 Ga0070688_100134393 3300005365 Bacteria 1673
16 Ga0070709_10229716 3300005434 Bacteria 1327
17 Ga0070714_100003368 3300005435 Bacteria 11910
18 Ga0070713_100015651 3300005436 Bacteria 5681
19 Ga0070713_100093590 3300005436 Bacteria 2590
20 Ga0070711_100441185 3300005439 Bacteria 1064
21 Ga0070708_100050072 3300005445 Bacteria 3697
22 Ga0070678_100192608 3300005456 Bacteria 1677
23 Ga0070678_100225457 3300005456 Bacteria 1560
24 Ga0070662_100352752 3300005457 Bacteria 1206
25 Ga0070681_10005094 3300005458 Bacteria 12678
26 Ga0070706_100164522 3300005467 Bacteria 2071
27 Ga0070698_100003620 3300005471 Bacteria 16986
28 Ga0070679_100009376 3300005530 Bacteria 9257
29 Ga0070697_100053852 3300005536 Bacteria 3270
30 Ga0070686_100142859 3300005544 Bacteria 1668
31 Ga0070665_100266832 3300005548 Bacteria 1713
32 Ga0070665_100403851 3300005548 Bacteria 1374
33 Ga0068855_100211569 3300005563 Bacteria 2178
34 Ga0068855_100213268 3300005563 Bacteria 2168
35 Ga0068855_100248150 3300005563 Bacteria 1986
36 Ga0070664_100008848 3300005564 Bacteria 8159
37 Ga0068857_100885197 3300005577 Bacteria 856
38 Ga0068854_100345509 3300005578 Bacteria 1216
39 Ga0068856_100055440 3300005614 Bacteria 3911
40 Ga0068856_100112609 3300005614 Bacteria 2719
41 Ga0068856_100151910 3300005614 Bacteria 2325
42 Ga0068856_100863315 3300005614 Bacteria 924
43 Ga0070702_100086957 3300005615 Bacteria 1887
44 Ga0068852_100113889 3300005616 Bacteria 2463
45 Ga0068852_100338872 3300005616 Bacteria 1465
46 Ga0068859_100608757 3300005617 Bacteria 1185
47 Ga0068864_100362483 3300005618 Bacteria 1370
48 Ga0068861_100626160 3300005719 Bacteria 991
49 Ga0068858_100414347 3300005842 Bacteria 1295
50 Ga0068858_100730741 3300005842 Bacteria 964
51 Ga0068860_100030504 3300005843 Bacteria 5185
52 Ga0068862_100739679 3300005844 Bacteria 956
53 Ga0081455_10001221 3300005937 Bacteria 32147
54 Ga0081455_10145931 3300005937 Bacteria 1831
55 Ga0081540_1002682 3300005983 Bacteria 14479
56 Ga0081539_10001452 3300005985 Bacteria 40486
57 Ga0081539_10007552 3300005985 Bacteria 9844
58 Ga0070717_10240251 3300006028 Bacteria 1597
59 Ga0070717_10604112 3300006028 Bacteria 995
60 Ga0070712_100004133 3300006175 Bacteria 8923
61 Ga0070712_100023723 3300006175 Bacteria 4057
62 Ga0075362_10016715 3300006177 Bacteria 3009
63 Ga0075362_10043231 3300006177 Bacteria 1995
64 Ga0075362_10049821 3300006177 Bacteria 1872
65 Ga0075367_10049807 3300006178 Bacteria 2470
66 Ga0075369_10000243 3300006186 Bacteria 16217
67 Ga0097620_100608873 3300006931 Bacteria 1185
68 Ga0105244_10007362 3300009036 Bacteria 6996
69 Ga0105240_10021046 3300009093 Bacteria 8681
70 Ga0111539_10121009 3300009094 Bacteria 3067
71 Ga0105245_10048488 3300009098 Bacteria 3800
72 Ga0105245_10060700 3300009098 Bacteria 3406
73 Ga0105245_10808032 3300009098 Bacteria 976
74 Ga0105241_10545899 3300009174 Bacteria 1040
75 Ga0105242_10001815 3300009176 Bacteria 16772
76 Ga0105248_10614575 3300009177 Bacteria 1226
77 Ga0105237_10241941 3300009545 Bacteria 1806
78 Ga0105237_10405324 3300009545 Bacteria 1368
79 Ga0105238_10056794 3300009551 Bacteria 3927
80 Ga0105239_10065142 3300010375 Bacteria 4001
81 Ga0105239_10429183 3300010375 Bacteria 1498
82 Ga0105239_10767639 3300010375 Bacteria 1104
83 Ga0157373_10043686 3300013100 Bacteria 3201
84 Ga0157370_10716320 3300013104 Bacteria 913
85 Ga0157369_10014876 3300013105 Bacteria 8781
86 Ga0157369_10048725 3300013105 Bacteria 4596
87 Ga0157374_10066060 3300013296 Bacteria 3399
88 Ga0163162_10235852 3300013306 Bacteria 1960
89 Ga0163162_10430602 3300013306 Bacteria 1451
90 Ga0163162_11032938 3300013306 Bacteria 930
91 Ga0163163_10034298 3300014325 Bacteria 4913
92 Ga0163163_10184630 3300014325 Bacteria 2133
93 Ga0182008_10016824 3300014497 Bacteria 3795
94 Ga0157376_10063525 3300014969 Bacteria 3111
95 Ga0157376_10316585 3300014969 Bacteria 1482
96 Ga0197907_10679443 3300020069 Bacteria 1057
97 Ga0206356_10060858 3300020070 Bacteria 1544
98 Ga0206355_1052921 3300020076 Bacteria 1134
99 Ga0206355_1572587 3300020076 Bacteria 953
100 Ga0206351_10316701 3300020077 Bacteria 1918
101 Ga0206352_10577540 3300020078 Unclassified 849
102 Ga0206354_10277331 3300020081 Bacteria 1483
103 Ga0206353_12059190 3300020082 Unclassified 966
104 Ga0213876_10004154 3300021384 Bacteria 8124
105 Ga0213876_10016401 3300021384 Bacteria 3916
106 Ga0213875_10152873 3300021388 Unclassified 1082
107 Ga0213871_10029567 3300021441 Bacteria 1421
108 Ga0224712_10007720 3300022467 Bacteria 3147
109 Ga0224712_10037097 3300022467 Bacteria 1812
110 Ga0224712_10211773 3300022467 Bacteria 884
111 Ga0207655_1007593 3300025728 Bacteria 7014
112 Ga0207692_10039211 3300025898 Bacteria 2329
113 Ga0207692_10100545 3300025898 Bacteria 1586
114 Ga0207680_10206271 3300025903 Bacteria 1342
115 Ga0207699_10196011 3300025906 Bacteria 1366
116 Ga0207705_10098906 3300025909 Bacteria 2144
117 Ga0207705_10448231 3300025909 Bacteria 1001
118 Ga0207684_10081605 3300025910 Bacteria 2752
119 Ga0207684_10241859 3300025910 Bacteria 1557
120 Ga0207695_10023757 3300025913 Bacteria 6918
121 Ga0207693_10010593 3300025915 Bacteria 7480
122 Ga0207693_10227009 3300025915 Bacteria 1467
123 Ga0207660_10019427 3300025917 Bacteria 4542
124 Ga0207649_10007751 3300025920 Bacteria 5841
125 Ga0207652_10020281 3300025921 Bacteria 5472
126 Ga0207646_10338310 3300025922 Bacteria 1360
127 Ga0207687_10090860 3300025927 Bacteria 2226
128 Ga0207700_10005914 3300025928 Bacteria 7358
129 Ga0207700_10074325 3300025928 Bacteria 2629
130 Ga0207700_10092804 3300025928 Bacteria 2388
131 Ga0207700_10138187 3300025928 Bacteria 1999
132 Ga0207700_10276280 3300025928 Bacteria 1443
133 Ga0207664_10034711 3300025929 Bacteria 3887
134 Ga0207664_10069249 3300025929 Bacteria 2837
135 Ga0207644_10063248 3300025931 Bacteria 2687
136 Ga0207644_10201835 3300025931 Bacteria 1569
137 Ga0207644_10444721 3300025931 Bacteria 1064
138 Ga0207644_10670880 3300025931 Bacteria 864
139 Ga0207686_10002624 3300025934 Bacteria 9757
140 Ga0207711_10212293 3300025941 Bacteria 1768
141 Ga0207679_10025321 3300025945 Bacteria 4079
142 Ga0207667_10005846 3300025949 Bacteria 14984
143 Ga0207667_10047373 3300025949 Bacteria 4550
144 Ga0207667_10351099 3300025949 Bacteria 1504
145 Ga0207667_10368426 3300025949 Bacteria 1464
146 Ga0207658_10418843 3300025986 Bacteria 1181
147 Ga0207703_10393916 3300026035 Bacteria 1284
148 Ga0207702_10004579 3300026078 Bacteria 12256
149 Ga0207702_10194885 3300026078 Bacteria 1875
150 Ga0207676_10485152 3300026095 Bacteria 1171
151 Ga0207674_10219908 3300026116 Bacteria 1847
152 Ga0207675_100284706 3300026118 Bacteria 1607
153 Ga0207683_10014321 3300026121 Bacteria 6757
154 Ga0207683_10198515 3300026121 Bacteria 1823
155 Ga0209588_1042573 3300027671 Bacteria 1467
156 Ga0268266_10257610 3300028379 Bacteria 1616
157 Ga0268264_10074622 3300028381 Bacteria 2882
158 Ga0307515_10109676 3300028794 Bacteria 3239
159 Ga0265338_10017464 3300028800 Bacteria 7730
160 Ga0307411_10518007 3300032005 Bacteria 1012
161 Ga0373926_0023095 3300035083 Bacteria 2158
162 Ga0373934_0028371 3300035086 Bacteria 2181
163 Ga0373934_0068322 3300035086 Bacteria 1420
164 Ga0373932_0108358 3300035112 Bacteria 913
165 Ga0373941_0031730 3300035115 Bacteria 1576
166 Ga0373956_0112203 3300035119 Unclassified 1269
167 Ga0373935_0063822 3300035692 Bacteria 2361
168 Ga0373927_0282883 3300035695 Unclassified 1091
169 Ga0373933_0259668 3300035724 Bacteria 1120
170 Ga0373947_0005283 3300035725 Bacteria 7550
171 Ga0373947_0110815 3300035725 Bacteria 1734
172 Ga0373947_0152610 3300035725 Bacteria 1489
173 Ga0373937_0002888 3300036401 Bacteria 14348
174 Ga0373937_0073882 3300036401 Bacteria 3146
175 Ga0373937_0491733 3300036401 Bacteria 1165
176 Ga0373925_0143713 3300037068 Bacteria 1869
177 Ga0373925_0183384 3300037068 Bacteria 1658
178 Ga0395900_0014919 3300037418 Bacteria 7918
179 Ga0395900_0039592 3300037418 Bacteria 4856
180 Ga0395898_0037854 3300037466 Bacteria 4782
181 Ga0436364_0042534 3300037853 Bacteria 3888
182 Ga0436364_0720677 3300037853 Bacteria 3238
183 Ga0436364_1521643 3300037853 Unclassified 2457
184 Ga0395901_0013884 3300038443 Bacteria 8195
185 Ga0395901_0040618 3300038443 Bacteria 4819
186 Ga0395901_0095912 3300038443 Bacteria 3108
187 Ga0436365_0575697 3300039437 Bacteria 47908
188 Ga0436365_1082193 3300039437 Bacteria 13609
189 Ga0436360_0188237 3300039438 Bacteria 1245
190 Ga0436361_0658240 3300039447 Bacteria 1713
191 Ga0436362_0702409 3300039453 Bacteria 1528
192 Ga0466966_0033435 3300044684 Bacteria 3330
193 Ga0466963_0004601 3300044694 Bacteria 8035
194 Ga0466963_0010606 3300044694 Bacteria 5586
195 Ga0466971_0034927 3300044719 Bacteria 2254
196 Ga0466957_0428871 3300044842 Bacteria 908
197 Ga0451576_0000326 3300045051 Bacteria 115294
198 Ga0466958_0012217 3300045836 Bacteria 4858
199 Ga0466967_0109669 3300045976 Bacteria 2534
200 Ga0466967_0482742 3300045976 Bacteria 1214
201 Ga0495653_0035097 3300046463 Bacteria 3960
202 Ga0495664_0039848 3300046477 Bacteria 2776
203 Ga0495594_0276079 3300046499 Bacteria 958
204 Ga0495608_0023508 3300046511 Bacteria 4224
205 Ga0495608_0372590 3300046511 Unclassified 876
206 Ga0495628_0653473 3300046516 Bacteria 746
207 Ga0495652_0467397 3300046529 Bacteria 880
208 Ga0495640_0184279 3300046533 Bacteria 1329
209 Ga0495645_0003436 3300046543 Bacteria 10739
210 Ga0495645_0296504 3300046543 Bacteria 1058
211 Ga0495657_0018672 3300046675 Bacteria 5011
212 Ga0495599_0090969 3300046678 Bacteria 1904
213 Ga0495646_0013438 3300046680 Bacteria 5205
214 Ga0495647_0148013 3300046681 Bacteria 1005
215 Ga0495671_0005759 3300046692 Bacteria 7224
216 Ga0495672_0007300 3300047320 Bacteria 8336
217 Ga0495675_0031826 3300047444 Bacteria 3368
218 Ga0495684_0065378 3300047471 Bacteria 2765
219 Ga0495684_0100129 3300047471 Bacteria 2191
220 Ga0495686_0142897 3300047472 Bacteria 1411
221 Ga0495602_0002241 3300048088 Bacteria 19516
222 Ga0495602_0075057 3300048088 Bacteria 2871
223 Ga0496112_0490949 3300048915 Bacteria 1164
224 Ga0496113_0724581 3300048916 Bacteria 793
225 Ga0496116_0150643 3300048919 Bacteria 1292
226 Ga0496119_0040123 3300048922 Bacteria 2999
227 Ga0496120_0022736 3300048923 Bacteria 3941
228 Ga0501033_0346570 3300049570 Bacteria 1041
229 Ga0501034_0002153 3300049571 Bacteria 24459
230 Ga0501034_0005881 3300049571 Bacteria 13325
231 Ga0501034_0078562 3300049571 Bacteria 3304
232 Ga0501043_0116861 3300049579 Bacteria 2093
233 Ga0501047_0359243 3300049581 Bacteria 1292
234 Ga0501070_0540587 3300049586 Bacteria 933
235 Ga0501044_0014276 3300049823 Bacteria 8576
236 nmdc:mga03683_57371_c1 3300050489 Bacteria 1639
237 nmdc:mga03683_6002_c2 3300050489 Bacteria 2536
238 nmdc:mga0yw44_52123_c1 3300050492 Bacteria 2480
239 nmdc:mga0k408_24696_c2 3300050493 Bacteria 2118
240 nmdc:mga07m45_50941_c2 3300050496 Bacteria 1512
241 nmdc:mga0sz30_127_c1 3300050516 Bacteria 28168
242 Ga0495601_0005593 3300053077 Bacteria 7330
243 Ga0500647_0034554 3300053091 Bacteria 2414
244 Ga0500583_0079847 3300053092 Bacteria 1579
245 Ga0500651_0110957 3300053093 Bacteria 1673
246 Ga0500641_0018816 3300053096 Bacteria 2603
247 Ga0500658_0077076 3300053134 Bacteria 1418
248 Ga0500568_0057681 3300053139 Bacteria 1510
249 Ga0500616_0013150 3300053153 Bacteria 4817
250 Ga0500552_001128 3300053733 Bacteria 2531
251 Ga0587084_025072 3300059477 Bacteria 922
252 Ga0587066_027841 3300059490 Bacteria 986
253 Ga0587070_036507 3300059491 Bacteria 919
254 Ga0587073_0029677 3300059492 Bacteria 1120
255 Ga0587073_0050077 3300059492 Bacteria 944
256 Ga0587080_004319 3300059503 Bacteria 1836
257 Ga0587083_0010454 3300059505 Bacteria 1505
258 Ga0587085_003647 3300059506 Bacteria 1692
259 Ga0587088_019193 3300059508 Bacteria 1122
260 Ga0587091_036862 3300059511 Bacteria 946
261 Ga0587092_030157 3300059512 Bacteria 892
262 Ga0587094_003472 3300059513 Bacteria 1723
263 Ga0587117_018626 3300059627 Bacteria 946
264 Ga0587062_005680 3300059639 Bacteria 1388
265 Ga0587069_021155 3300059642 Bacteria 977
266 Ga0587072_042059 3300059643 Bacteria 891
267 Ga0587075_015755 3300059644 Bacteria 1067
268 Ga0587076_008909 3300059645 Bacteria 1413
269 Ga0587079_047727 3300059647 Bacteria 888
270 Ga0587079_054118 3300059647 Bacteria 851
271 Ga0466962_0044336 3300061719 Bacteria 2127
272 2513629358 2513237092 Bacteria 8341956
273 2883580096 2883577096 Bacteria 4709178
274 2935712883 2935703347 Bacteria 10242284
275 2935925208 2935916978 Bacteria 9113783
276 rootH2_10301074
277 JGI25406J46586_10042666
278 Ga0058862_11889600
279 Ga0058862_12301102
280 Ga0070658_10007924
281 Ga0070676_10212883
282 Ga0070690_100051218
283 Ga0070680_100000215
284 Ga0070680_100026062
285 Ga0070660_100594710
286 Ga0070691_10043755
287 Ga0070687_100451951
288 Ga0070675_100415735
289 Ga0070671_100270043
290 Ga0070688_100134393
291 Ga0070709_10229716
292 Ga0070714_100003368
293 Ga0070713_100015651
294 Ga0070713_100093590
295 Ga0070711_100441185
296 Ga0070708_100050072
297 Ga0070678_100192608
298 Ga0070678_100225457
299 Ga0070662_100352752
300 Ga0070681_10005094
301 Ga0070706_100164522
302 Ga0070698_100003620
303 Ga0070679_100009376
304 Ga0070697_100053852
305 Ga0070686_100142859
306 Ga0070665_100266832
307 Ga0070665_100403851
308 Ga0068855_100211569
309 Ga0068855_100213268
310 Ga0068855_100248150
311 Ga0070664_100008848
312 Ga0068857_100885197
313 Ga0068854_100345509
314 Ga0068856_100055440
315 Ga0068856_100112609
316 Ga0068856_100151910
317 Ga0068856_100863315
318 Ga0070702_100086957
319 Ga0068852_100113889
320 Ga0068852_100338872
321 Ga0068859_100608757
322 Ga0068864_100362483
323 Ga0068861_100626160
324 Ga0068858_100414347
325 Ga0068858_100730741
326 Ga0068860_100030504
327 Ga0068862_100739679
328 Ga0081455_10001221
329 Ga0081455_10145931
330 Ga0081540_1002682
331 Ga0081539_10001452
332 Ga0081539_10007552
333 Ga0070717_10240251
334 Ga0070717_10604112
335 Ga0070712_100004133
336 Ga0070712_100023723
337 Ga0075362_10016715
338 Ga0075362_10043231
339 Ga0075362_10049821
340 Ga0075367_10049807
341 Ga0075369_10000243
342 Ga0097620_100608873
343 Ga0105244_10007362
344 Ga0105240_10021046
345 Ga0111539_10121009
346 Ga0105245_10048488
347 Ga0105245_10060700
348 Ga0105245_10808032
349 Ga0105241_10545899
350 Ga0105242_10001815
351 Ga0105248_10614575
352 Ga0105237_10241941
353 Ga0105237_10405324
354 Ga0105238_10056794
355 Ga0105239_10065142
356 Ga0105239_10429183
357 Ga0105239_10767639
358 Ga0157373_10043686
359 Ga0157370_10716320
360 Ga0157369_10014876
361 Ga0157369_10048725
362 Ga0157374_10066060
363 Ga0163162_10235852
364 Ga0163162_10430602
365 Ga0163162_11032938
366 Ga0163163_10034298
367 Ga0163163_10184630
368 Ga0182008_10016824
369 Ga0157376_10063525
370 Ga0157376_10316585
371 Ga0197907_10679443
372 Ga0206356_10060858
373 Ga0206355_1052921
374 Ga0206355_1572587
375 Ga0206351_10316701
376 Ga0206352_10577540
377 Ga0206354_10277331
378 Ga0206353_12059190
379 Ga0213876_10004154
380 Ga0213876_10016401
381 Ga0213875_10152873
382 Ga0213871_10029567
383 Ga0224712_10007720
384 Ga0224712_10037097
385 Ga0224712_10211773
386 Ga0207655_1007593
387 Ga0207692_10039211
388 Ga0207692_10100545
389 Ga0207680_10206271
390 Ga0207699_10196011
391 Ga0207705_10098906
392 Ga0207705_10448231
393 Ga0207684_10081605
394 Ga0207684_10241859
395 Ga0207695_10023757
396 Ga0207693_10010593
397 Ga0207693_10227009
398 Ga0207660_10019427
399 Ga0207649_10007751
400 Ga0207652_10020281
401 Ga0207646_10338310
402 Ga0207687_10090860
403 Ga0207700_10005914
404 Ga0207700_10074325
405 Ga0207700_10092804
406 Ga0207700_10138187
407 Ga0207700_10276280
408 Ga0207664_10034711
409 Ga0207664_10069249
410 Ga0207644_10063248
411 Ga0207644_10201835
412 Ga0207644_10444721
413 Ga0207644_10670880
414 Ga0207686_10002624
415 Ga0207711_10212293
416 Ga0207679_10025321
417 Ga0207667_10005846
418 Ga0207667_10047373
419 Ga0207667_10351099
420 Ga0207667_10368426
421 Ga0207658_10418843
422 Ga0207703_10393916
423 Ga0207702_10004579
424 Ga0207702_10194885
425 Ga0207676_10485152
426 Ga0207674_10219908
427 Ga0207675_100284706
428 Ga0207683_10014321
429 Ga0207683_10198515
430 Ga0209588_1042573
431 Ga0268266_10257610
432 Ga0268264_10074622
433 Ga0307515_10109676
434 Ga0265338_10017464
435 Ga0307411_10518007
436 Ga0373926_0023095
437 Ga0373934_0028371
438 Ga0373934_0068322
439 Ga0373932_0108358
440 Ga0373941_0031730
441 Ga0373956_0112203
442 Ga0373935_0063822
443 Ga0373927_0282883
444 Ga0373933_0259668
445 Ga0373947_0005283
446 Ga0373947_0110815
447 Ga0373947_0152610
448 Ga0373937_0002888
449 Ga0373937_0073882
450 Ga0373937_0491733
451 Ga0373925_0143713
452 Ga0373925_0183384
453 Ga0395900_0014919
454 Ga0395900_0039592
455 Ga0395898_0037854
456 Ga0436364_0042534
457 Ga0436364_0720677
458 Ga0436364_1521643
459 Ga0395901_0013884
460 Ga0395901_0040618
461 Ga0395901_0095912
462 Ga0436365_0575697
463 Ga0436365_1082193
464 Ga0436360_0188237
465 Ga0436361_0658240
466 Ga0436362_0702409
467 Ga0466966_0033435
468 Ga0466963_0004601
469 Ga0466963_0010606
470 Ga0466971_0034927
471 Ga0466957_0428871
472 Ga0451576_0000326
473 Ga0466958_0012217
474 Ga0466967_0109669
475 Ga0466967_0482742
476 Ga0495653_0035097
477 Ga0495664_0039848
478 Ga0495594_0276079
479 Ga0495608_0023508
480 Ga0495608_0372590
481 Ga0495628_0653473
482 Ga0495652_0467397
483 Ga0495640_0184279
484 Ga0495645_0003436
485 Ga0495645_0296504
486 Ga0495657_0018672
487 Ga0495599_0090969
488 Ga0495646_0013438
489 Ga0495647_0148013
490 Ga0495671_0005759
491 Ga0495672_0007300
492 Ga0495675_0031826
493 Ga0495684_0065378
494 Ga0495684_0100129
495 Ga0495686_0142897
496 Ga0495602_0002241
497 Ga0495602_0075057
498 Ga0496112_0490949
499 Ga0496113_0724581
500 Ga0496116_0150643
501 Ga0496119_0040123
502 Ga0496120_0022736
503 Ga0501033_0346570
504 Ga0501034_0002153
505 Ga0501034_0005881
506 Ga0501034_0078562
507 Ga0501043_0116861
508 Ga0501047_0359243
509 Ga0501070_0540587
510 Ga0501044_0014276
511 nmdc:mga03683_57371_c1
512 nmdc:mga03683_6002_c2
513 nmdc:mga0yw44_52123_c1
514 nmdc:mga0k408_24696_c2
515 nmdc:mga07m45_50941_c2
516 nmdc:mga0sz30_127_c1
517 Ga0495601_0005593
518 Ga0500647_0034554
519 Ga0500583_0079847
520 Ga0500651_0110957
521 Ga0500641_0018816
522 Ga0500658_0077076
523 Ga0500568_0057681
524 Ga0500616_0013150
525 Ga0500552_001128
526 Ga0587084_025072
527 Ga0587066_027841
528 Ga0587070_036507
529 Ga0587073_0029677
530 Ga0587073_0050077
531 Ga0587080_004319
532 Ga0587083_0010454
533 Ga0587085_003647
534 Ga0587088_019193
535 Ga0587091_036862
536 Ga0587092_030157
537 Ga0587094_003472
538 Ga0587117_018626
539 Ga0587062_005680
540 Ga0587069_021155
541 Ga0587072_042059
542 Ga0587075_015755
543 Ga0587076_008909
544 Ga0587079_047727
545 Ga0587079_054118
546 Ga0466962_0044336
547 2513629358
548 2883580096
549 2935712883
550 2935925208

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00596

Aldolase_II

Class II Aldolase and Adducin N-terminal domain

61

239

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ocr-assembly1.cif.gz_A crystal structure of aldolase ii superfamily protein from pseudomonas syringae 0.9396 9 253
3ocr-assembly2.cif.gz_B crystal structure of aldolase ii superfamily protein from pseudomonas syringae 0.9318 12 253
3ocr-assembly1.cif.gz_A crystal structure of aldolase ii superfamily protein from pseudomonas syringae 0.9145 9 253
3ocr-assembly2.cif.gz_B crystal structure of aldolase ii superfamily protein from pseudomonas syringae 0.9064 12 253
6btg-assembly1.cif.gz_A crystal structure of deoxyribose-phosphate aldolase bound with dhap from bacillus thuringiensis 0.88 17 222
ID Description Score Start End Superfamily
3ocrB00 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.9306 12 253 3.40.225.10
af_Q54T47_16_268_3.40.225.10 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.9128 7 253 3.40.225.10
af_Q7LKY2_67_324_3.40.225.10 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.9104 12 253 3.40.225.10
3ocrB00 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.9051 12 253 3.40.225.10
af_Q9U9K0_112_366_3.40.225.10 Alpha Beta;3-Layer(aba) Sandwich;L-fuculose-1-phosphate Aldolase;Class II aldolase/adducin N-terminal domain 0.8993 10 245 3.40.225.10
ID Description Score Start End GO Terms
AF-A0A845J1B0-F1-model_v4 deleted 0.9913 8 253
AF-A0A3D2FWJ8-F1-model_v4 Class II aldolase 0.971 12 153 GO:0005856
GO:0051015
AF-A0A4Q3SPT4-F1-model_v4 Class II aldolase/adducin family protein 0.9625 12 221 GO:0005856
GO:0051015
AF-H1SJ23-F1-model_v4 Class II aldolase/adducin family protein 0.9618 9 172 GO:0005856
GO:0051015
AF-A0A383CI94-F1-model_v4 Class II aldolase/adducin N-terminal domain-containing protein 0.9616 12 170 GO:0005856
GO:0051015

Map