F380063

General Info

Members Datasets Scaffolds Average Seq Length
274 193 198 319

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2512564039|2512734441
Length 370
Sequence PKSSPVKNLSLRCSAPFAENDINPQTNGFQVPAHGTEAHCKRIPNPKESETMEHTGVQKKAKAVTKVSADGSVLRRLQRDKWLYVLLLPGLLYFLIFKYVPMWGVLLAFKNYQPFLGFWESEWVGFEHFRQFFANPDFGRLMRNTLLLSLYNLIFFFPAPIVLALLLNEVRVSVYKRAIQTLVYVPHFMSLVIVASITYVFLTTEGGIINLLLEKFTGQKIDFLSSPDWFRPMIILQTIWKECGWGTIIFLAALAGVDAEQYEAAIVDGASRWRQLWHITLPSIQSTIVILLILRLGDVLDNGFEQIYLMSNALNRDVADVFDTYVYMMGITQGAFSYSTAVGLFKSVIGVTLVLSSNYLAKRFGQSGIY

Samples

Sample ID Description Type Environment
1 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
2 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
3 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
4 2554235283 Bacillus safensis VK Isolate Rhizosphere
5 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
6 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
7 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
8 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
9 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
10 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
11 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
12 2643221735 Bacillus sp. Root920 Isolate Unclassified
13 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
14 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
15 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
16 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
17 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
18 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
19 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
20 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
21 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
22 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
23 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
24 2811994870 Bacillus sp. JB4 Isolate Unclassified
25 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
26 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
27 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
28 2818991459 Paenibacillus sp. 597 Isolate Unclassified
29 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
30 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
31 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
32 2860837431 Bacillus sp. WR11 Isolate Unclassified
33 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
34 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
35 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
36 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
37 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
38 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
39 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
40 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
41 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
42 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
43 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
44 2919726948 Bacillus pumilus 4489 Isolate Unclassified
45 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
46 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
47 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
48 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
49 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
50 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
51 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
52 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
53 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
54 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
55 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
56 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
57 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
58 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
59 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
60 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
61 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
62 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
63 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
64 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
65 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
66 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
67 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
68 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
69 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
70 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
71 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
72 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
73 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
74 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
75 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
76 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
77 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
78 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
79 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
80 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
81 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
82 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
83 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
84 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
85 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
86 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
87 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
88 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
89 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
90 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
91 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
93 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
94 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
107 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
114 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
115 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
116 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
117 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
121 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
122 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
123 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
124 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
125 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
128 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
131 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
132 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
133 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
134 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
135 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
136 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
137 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
138 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
139 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
140 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
141 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
144 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
145 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
146 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
149 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
150 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
160 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
161 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
177 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
178 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
179 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
180 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
181 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
182 3300049774 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A25_A_5_drought Metagenome Rhizosphere
183 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
187 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
188 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
189 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
190 8022653035 Bacillus sp. Rc4 Isolate Unclassified
191 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
192 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
193 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 71.9
Metatranscriptomes 0.36
Isolates 27.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.11
Nodule 0.36
Rhizoplane 1.09
Rhizosphere 63.14
Stem 0
Stem Tuber 0
Unclassified 30.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10014149 3300001979 Bacteria 2954
2 JGI24739J22299_10006900 3300001989 Bacteria 4278
3 JGI25151J46595_10000046 3300003187 Bacteria 168647
4 JGI25151J46595_10008891 3300003187 Bacteria 4795
5 JGI25406J46586_10005105 3300003203 Bacteria 6090
6 rootH1_10034649 3300003316 Bacteria 5371
7 rootH2_10084242 3300003320 Bacteria 5177
8 Ga0006562J51391_1008346 3300003578 Bacteria 8210
9 Ga0055538_1000788 3300003751 Bacteria 8799
10 Ga0055535_1004758 3300003761 Bacteria 3180
11 Ga0055541_1000166 3300003841 Bacteria 31861
12 Ga0068869_100031896 3300005334 Bacteria 3710
13 Ga0068868_100289739 3300005338 Bacteria 1388
14 Ga0070668_100006166 3300005347 Bacteria 8880
15 Ga0070664_100355935 3300005564 Bacteria 1333
16 Ga0068857_100118960 3300005577 Bacteria 2378
17 Ga0068858_100420754 3300005842 Bacteria 1285
18 Ga0068860_100198723 3300005843 Bacteria 1942
19 Ga0081455_10062618 3300005937 Bacteria 3126
20 Ga0081538_10042685 3300005981 Bacteria 2858
21 Ga0081539_10002010 3300005985 Bacteria 30801
22 Ga0075432_10005887 3300006058 Bacteria 4172
23 Ga0105239_10280686 3300010375 Bacteria 1875
24 Ga0157370_10137906 3300013104 Bacteria 2273
25 Ga0157369_10076392 3300013105 Bacteria 3590
26 Ga0157378_10085898 3300013297 Bacteria 2851
27 Ga0157372_10035368 3300013307 Bacteria 5499
28 Ga0163161_10340184 3300017792 Bacteria 1190
29 Ga0209784_100103 3300025224 Bacteria 98778
30 Ga0209566_100033 3300025225 Bacteria 332650
31 Ga0209566_100080 3300025225 Bacteria 156454
32 Ga0209566_101217 3300025225 Bacteria 9003
33 Ga0209025_1000001 3300025294 Bacteria 1888151
34 Ga0209025_1027585 3300025294 Bacteria 2812
35 Ga0207688_10066357 3300025901 Bacteria 2041
36 Ga0207647_10001976 3300025904 Bacteria 15661
37 Ga0207687_10290254 3300025927 Bacteria 1314
38 Ga0207689_10253943 3300025942 Bacteria 1454
39 Ga0207668_10012601 3300025972 Bacteria 5182
40 Ga0207703_10344241 3300026035 Bacteria 1371
41 Ga0207641_10590711 3300026088 Bacteria 1086
42 Ga0207674_10015518 3300026116 Bacteria 8367
43 Ga0209371_1007655 3300027312 Bacteria 3724
44 Ga0268264_10384364 3300028381 Bacteria 1345
45 Ga0307517_10181904 3300028786 Bacteria 1355
46 Ga0307515_10000149 3300028794 Bacteria 169663
47 Ga0307515_10005180 3300028794 Bacteria 26494
48 Ga0307515_10054368 3300028794 Bacteria 5879
49 Ga0307515_10091752 3300028794 Bacteria 3790
50 Ga0268256_1007894 3300030500 Bacteria 3724
51 Ga0307512_10014145 3300030522 Bacteria 7448
52 Ga0307512_10021072 3300030522 Bacteria 5884
53 Ga0307513_10000003 3300031456 Bacteria 590921
54 Ga0307513_10008322 3300031456 Bacteria 13284
55 Ga0307513_10166619 3300031456 Bacteria 2087
56 Ga0307408_100004196 3300031548 Bacteria 9817
57 Ga0307408_100011434 3300031548 Bacteria 5866
58 Ga0307408_100032163 3300031548 Bacteria 3657
59 Ga0307408_100118823 3300031548 Bacteria 2044
60 Ga0307508_10005508 3300031616 Bacteria 12031
61 Ga0307516_10002758 3300031730 Bacteria 23158
62 Ga0307516_10031935 3300031730 Bacteria 5307
63 Ga0307405_10020561 3300031731 Bacteria 3691
64 Ga0307405_10093487 3300031731 Bacteria 1998
65 Ga0307405_10134046 3300031731 Bacteria 1716
66 Ga0307405_10184279 3300031731 Bacteria 1502
67 Ga0307413_10024764 3300031824 Bacteria 3277
68 Ga0307413_10037538 3300031824 Bacteria 2799
69 Ga0307413_10050024 3300031824 Bacteria 2508
70 Ga0307410_10027989 3300031852 Bacteria 3568
71 Ga0307410_10243173 3300031852 Bacteria 1395
72 Ga0307406_10092958 3300031901 Bacteria 2035
73 Ga0307406_10098391 3300031901 Bacteria 1986
74 Ga0307407_10012658 3300031903 Bacteria 4063
75 Ga0307407_10019375 3300031903 Bacteria 3464
76 Ga0307407_10132831 3300031903 Bacteria 1595
77 Ga0307412_10002945 3300031911 Bacteria 9447
78 Ga0307412_10008104 3300031911 Bacteria 5987
79 Ga0307412_10080188 3300031911 Bacteria 2254
80 Ga0307412_10329784 3300031911 Bacteria 1217
81 Ga0307409_100019368 3300031995 Bacteria 4605
82 Ga0307409_100030705 3300031995 Bacteria 3865
83 Ga0307409_100200385 3300031995 Bacteria 1785
84 Ga0307416_100040751 3300032002 Bacteria 3611
85 Ga0307416_100146026 3300032002 Bacteria 2159
86 Ga0307414_10034410 3300032004 Bacteria 3359
87 Ga0373940_0008030 3300035088 Bacteria 2406
88 Ga0373951_0000736 3300035091 Bacteria 8964
89 Ga0373942_0001541 3300035207 Bacteria 5913
90 Ga0373962_0000895 3300035242 Bacteria 6819
91 Ga0395899_0100703 3300037312 Bacteria 2086
92 Ga0395900_0309990 3300037418 Bacteria 1562
93 Ga0395898_0041821 3300037466 Bacteria 4524
94 Ga0395905_0227201 3300037471 Bacteria 1746
95 Ga0395901_0017466 3300038443 Bacteria 7322
96 Ga0395901_0039374 3300038443 Bacteria 4891
97 Ga0395901_0221893 3300038443 Bacteria 1976
98 Ga0400483_114225 3300039062 Bacteria 1689
99 Ga0439436_0002476 3300041404 Bacteria 5553
100 Ga0439436_0005269 3300041404 Bacteria 3960
101 Ga0439466_0022390 3300041411 Bacteria 2231
102 Ga0439465_0020158 3300041413 Bacteria 2087
103 Ga0451791_1744671 3300041451 Bacteria 2127
104 Ga0439433_0003909 3300041999 Bacteria 3205
105 Ga0439433_0011955 3300041999 Bacteria 1902
106 Ga0439449_0000085 3300042007 Bacteria 30372
107 Ga0439449_0008830 3300042007 Bacteria 3823
108 Ga0439449_0054702 3300042007 Bacteria 1474
109 Ga0439457_006622 3300042014 Bacteria 2822
110 Ga0439457_008026 3300042014 Bacteria 2504
111 Ga0439462_0000317 3300042015 Bacteria 8966
112 Ga0439462_0023436 3300042015 Bacteria 1618
113 Ga0466969_0003528 3300044656 Bacteria 8315
114 Ga0466969_0016734 3300044656 Bacteria 3834
115 Ga0466965_0007157 3300044683 Bacteria 5112
116 Ga0466966_0137620 3300044684 Bacteria 1493
117 Ga0466961_0113208 3300044693 Bacteria 1706
118 Ga0466968_0006527 3300044735 Bacteria 4403
119 Ga0466959_0003384 3300045049 Bacteria 10422
120 Ga0466959_0004749 3300045049 Bacteria 9155
121 Ga0495590_0063811 3300046457 Bacteria 1289
122 Ga0495660_0003607 3300046810 Bacteria 9541
123 Ga0495686_0183064 3300047472 Bacteria 1213
124 Ga0496108_0000115 3300048911 Bacteria 79928
125 Ga0496116_0003915 3300048919 Bacteria 14502
126 Ga0496116_0005259 3300048919 Bacteria 12090
127 Ga0496116_0018905 3300048919 Bacteria 5291
128 Ga0496116_0071065 3300048919 Bacteria 2205
129 Ga0496116_0110886 3300048919 Bacteria 1613
130 Ga0496116_0121148 3300048919 Bacteria 1514
131 Ga0496117_0000150 3300048920 Bacteria 148465
132 Ga0496117_0000540 3300048920 Bacteria 62134
133 Ga0496119_0000088 3300048922 Bacteria 135581
134 Ga0496119_0005959 3300048922 Bacteria 11460
135 Ga0496120_0000006 3300048923 Bacteria 445068
136 Ga0496120_0000299 3300048923 Bacteria 82946
137 Ga0496120_0131954 3300048923 Bacteria 1278
138 Ga0496120_0149185 3300048923 Bacteria 1177
139 Ga0496121_0161837 3300048924 Bacteria 1636
140 Ga0496122_0000012 3300048925 Bacteria 526837
141 Ga0496122_0066630 3300048925 Bacteria 2599
142 Ga0496122_0072525 3300048925 Bacteria 2447
143 Ga0496122_0233304 3300048925 Bacteria 1044
144 Ga0496123_0006756 3300048926 Bacteria 11027
145 Ga0496123_0026727 3300048926 Bacteria 4315
146 Ga0496124_0001165 3300048927 Bacteria 41163
147 Ga0496124_0102731 3300048927 Bacteria 2313
148 Ga0496125_0000010 3300048928 Bacteria 671167
149 Ga0496125_0001981 3300048928 Bacteria 27856
150 Ga0496125_0021811 3300048928 Bacteria 5959
151 Ga0496126_0000008 3300048929 Bacteria 781752
152 Ga0496126_0000691 3300048929 Bacteria 61759
153 Ga0496126_0021171 3300048929 Bacteria 6357
154 Ga0496126_0024615 3300048929 Bacteria 5808
155 Ga0496126_0034756 3300048929 Bacteria 4729
156 Ga0501290_009323 3300049513 Bacteria 1248
157 Ga0501299_020838 3300049522 Bacteria 1198
158 Ga0501031_0012600 3300049568 Bacteria 5522
159 Ga0501032_0001532 3300049569 Bacteria 18440
160 Ga0501032_0006982 3300049569 Bacteria 8279
161 Ga0501032_0013822 3300049569 Bacteria 5727
162 Ga0501033_0015393 3300049570 Bacteria 5803
163 Ga0501033_0015576 3300049570 Bacteria 5765
164 Ga0501033_0039430 3300049570 Bacteria 3528
165 Ga0501034_0000042 3300049571 Bacteria 229124
166 Ga0501034_0055627 3300049571 Bacteria 3981
167 Ga0501036_0006097 3300049572 Bacteria 9781
168 Ga0501037_0020171 3300049573 Bacteria 4922
169 Ga0501038_0176708 3300049574 Bacteria 1725
170 Ga0501039_0007559 3300049575 Bacteria 8301
171 Ga0501042_0006823 3300049578 Bacteria 7447
172 Ga0501042_0050669 3300049578 Bacteria 2961
173 Ga0501043_0048740 3300049579 Bacteria 3330
174 Ga0501043_0204328 3300049579 Bacteria 1532
175 Ga0501046_0013423 3300049580 Bacteria 6935
176 Ga0501047_0121116 3300049581 Bacteria 2498
177 Ga0501048_0019919 3300049582 Bacteria 4918
178 Ga0501068_0025424 3300049584 Bacteria 3483
179 Ga0501074_0057740 3300049590 Bacteria 2796
180 Ga0501208_001559 3300049655 Bacteria 2211
181 Ga0501211_009114 3300049658 Bacteria 971
182 Ga0501217_009705 3300049661 Bacteria 2097
183 Ga0501217_026274 3300049661 Bacteria 1406
184 Ga0501243_014978 3300049675 Bacteria 1243
185 Ga0501221_006974 3300049704 Bacteria 1925
186 Ga0501221_007133 3300049704 Bacteria 1908
187 Ga0501079_0253152 3300049741 Bacteria 1377
188 Ga0501278_004647 3300049774 Bacteria 995
189 Ga0501035_0466181 3300049822 Bacteria 1043
190 Ga0501044_0027173 3300049823 Bacteria 6051
191 Ga0501044_0032351 3300049823 Bacteria 5499
192 Ga0501044_0152954 3300049823 Bacteria 2289
193 Ga0501044_0453894 3300049823 Bacteria 1188
194 Ga0501045_0052893 3300049824 Bacteria 2966
195 Ga0501212_030714 3300049851 Bacteria 865
196 nmdc:mga00v17_10502_c1 3300050491 Bacteria 5057
197 Ga0500600_0022173 3300053149 Bacteria 3804
198 Ga0500630_024707 3300053159 Bacteria 2967

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049513 Ga0501290_009323 Ga0501290_009323_409_1218 250
2 3300049522 Ga0501299_020838 Ga0501299_020838_94_903 250
3 3300049658 Ga0501211_009114 Ga0501211_009114_147_956 250
4 3300049675 Ga0501243_014978 Ga0501243_014978_419_1228 250
5 3300049704 Ga0501221_006974 Ga0501221_006974_1029_1838 250
6 3300049851 Ga0501212_030714 Ga0501212_030714_24_833 250
7 3300048923 Ga0496120_0149185 Ga0496120_0149185_322_1155 270
8 3300048922 Ga0496119_0000088 Ga0496119_0000088_112627_113484 278
9 3300048923 Ga0496120_0000006 Ga0496120_0000006_18204_19061 278
10 3300048925 Ga0496122_0233304 Ga0496122_0233304_99_956 278
11 3300048929 Ga0496126_0024615 Ga0496126_0024615_665_1522 278
12 3300028794 Ga0307515_10091752 Ga0307515_100917523 286
13 3300048919 Ga0496116_0003915 Ga0496116_0003915_12804_13685 286
14 3300049774 Ga0501278_004647 Ga0501278_004647_43_978 289
15 3300044656 Ga0466969_0003528 Ga0466969_0003528_1244_2347 291
16 3300044693 Ga0466961_0113208 Ga0466961_0113208_603_1655 291
17 3300045049 Ga0466959_0003384 Ga0466959_0003384_8223_9326 291
18 3300031730 Ga0307516_10031935 Ga0307516_100319353 297
19 3300031731 Ga0307405_10093487 Ga0307405_100934871 297
20 3300049655 Ga0501208_001559 Ga0501208_001559_789_1766 297
21 3300027312 Ga0209371_1007655 Ga0209371_10076554 298
22 3300030500 Ga0268256_1007894 Ga0268256_10078944 298
23 3300046810 Ga0495660_0003607 Ga0495660_0003607_7489_8457 298
24 3300047472 Ga0495686_0183064 Ga0495686_0183064_61_1059 299
25 3300005338 Ga0068868_100289739 Ga0068868_1002897392 300
26 3300005842 Ga0068858_100420754 Ga0068858_1004207542 300
27 3300005843 Ga0068860_100198723 Ga0068860_1001987232 300
28 3300013297 Ga0157378_10085898 Ga0157378_100858982 300
29 3300025942 Ga0207689_10253943 Ga0207689_102539432 300
30 3300026035 Ga0207703_10344241 Ga0207703_103442412 300
31 3300026088 Ga0207641_10590711 Ga0207641_105907112 300
32 3300025225 Ga0209566_100033 Ga0209566_100033125 304
33 3300025225 Ga0209566_100080 Ga0209566_10008045 304
34 3300042007 Ga0439449_0008830 Ga0439449_0008830_2654_3619 305
35 iso_pu_bacteria 2904113452 2904118423 306
36 3300048925 Ga0496122_0000012 Ga0496122_0000012_29248_30210 307
37 3300048926 Ga0496123_0026727 Ga0496123_0026727_2727_3689 307
38 3300048929 Ga0496126_0000008 Ga0496126_0000008_29243_30205 307
39 iso_pu_bacteria 8056533031 8056536665 308
40 3300006058 Ga0075432_10005887 Ga0075432_100058873 309
41 3300031548 Ga0307408_100004196 Ga0307408_10000419610 309
42 3300031731 Ga0307405_10020561 Ga0307405_100205613 309
43 3300031824 Ga0307413_10050024 Ga0307413_100500242 309
44 3300031852 Ga0307410_10027989 Ga0307410_100279892 309
45 3300031911 Ga0307412_10008104 Ga0307412_100081043 309
46 3300031995 Ga0307409_100019368 Ga0307409_1000193685 309
47 3300032004 Ga0307414_10034410 Ga0307414_100344102 309
48 3300041404 Ga0439436_0002476 Ga0439436_0002476_3463_4437 309
49 3300041411 Ga0439466_0022390 Ga0439466_0022390_358_1332 309
50 3300041413 Ga0439465_0020158 Ga0439465_0020158_516_1490 309
51 3300042014 Ga0439457_006622 Ga0439457_006622_1046_2020 309
52 3300042015 Ga0439462_0023436 Ga0439462_0023436_475_1449 309
53 iso_pu_bacteria 2791355222 2793182184 309
54 3300046457 Ga0495590_0063811 Ga0495590_0063811_95_1054 311
55 3300048919 Ga0496116_0005259 Ga0496116_0005259_818_1786 311
56 3300048920 Ga0496117_0000150 Ga0496117_0000150_18933_19901 311
57 3300048922 Ga0496119_0005959 Ga0496119_0005959_225_1193 311
58 3300048923 Ga0496120_0000299 Ga0496120_0000299_69877_70845 311
59 3300048925 Ga0496122_0072525 Ga0496122_0072525_1221_2189 311
60 3300048926 Ga0496123_0006756 Ga0496123_0006756_9080_10048 311
61 3300048928 Ga0496125_0000010 Ga0496125_0000010_369784_370752 311
62 3300048929 Ga0496126_0000691 Ga0496126_0000691_39745_40713 311
63 3300048929 Ga0496126_0034756 Ga0496126_0034756_3097_4065 311
64 iso_pu_bacteria 2548877040 2550899804 311
65 iso_pu_bacteria 2571042143 2571526999 311
66 iso_pu_bacteria 2585428059 2587740373 311
67 iso_pu_bacteria 2643221676 2644426729 311
68 iso_pu_bacteria 2728368933 2728533384 311
69 iso_pu_bacteria 2904755435 2904757946 311
70 iso_pu_bacteria 2971410472 2971412113 311
71 iso_pu_bacteria 8054465665 8054466840 311
72 iso_pu_bacteria 2512564039 2512736803 312
73 iso_pu_bacteria 2576861424 2578335281 312
74 iso_pu_bacteria 2593339198 2595316006 312
75 iso_pu_bacteria 2600255286 2601641307 312
76 iso_pu_bacteria 2857453340 2857457317 312
77 iso_pu_bacteria 2881636855 2881641693 312
78 iso_pu_bacteria 2971410472 2971415659 312
79 iso_pu_bacteria 2971511577 2971516180 312
80 iso_pu_bacteria 2980176882 2980181826 312
81 iso_pu_bacteria 3006969106 3006970883 312
82 iso_pu_bacteria 3006969106 3006970888 312
83 iso_pu_bacteria 8056533031 8056537603 312
84 3300031903 Ga0307407_10019375 Ga0307407_100193753 313
85 3300039062 Ga0400483_114225 Ga0400483_114225_288_1241 313
86 3300041999 Ga0439433_0011955 Ga0439433_0011955_865_1833 313
87 3300042007 Ga0439449_0054702 Ga0439449_0054702_210_1178 313
88 3300044656 Ga0466969_0016734 Ga0466969_0016734_1829_2797 313
89 3300044684 Ga0466966_0137620 Ga0466966_0137620_183_1151 313
90 3300044735 Ga0466968_0006527 Ga0466968_0006527_925_1893 313
91 3300045049 Ga0466959_0004749 Ga0466959_0004749_4582_5550 313
92 3300048919 Ga0496116_0071065 Ga0496116_0071065_745_1692 313
93 3300048925 Ga0496122_0066630 Ga0496122_0066630_1449_2396 313
94 3300048927 Ga0496124_0001165 Ga0496124_0001165_25632_26579 313
95 3300048928 Ga0496125_0001981 Ga0496125_0001981_18075_19022 313
96 iso_pu_bacteria 2751185782 2753270745 313
97 3300031911 Ga0307412_10080188 Ga0307412_100801882 314
98 3300041404 Ga0439436_0005269 Ga0439436_0005269_2469_3422 314
99 3300041999 Ga0439433_0003909 Ga0439433_0003909_1444_2397 314
100 3300042007 Ga0439449_0000085 Ga0439449_0000085_22970_23923 314
101 3300042014 Ga0439457_008026 Ga0439457_008026_171_1124 314
102 3300042015 Ga0439462_0000317 Ga0439462_0000317_1664_2617 314
103 3300044683 Ga0466965_0007157 Ga0466965_0007157_2041_3006 314
104 3300048923 Ga0496120_0131954 Ga0496120_0131954_55_1041 314
105 iso_pu_bacteria 2540341094 2540607896 314
106 iso_pu_bacteria 2554235283 2555469969 314
107 iso_pu_bacteria 2643221735 2644741555 314
108 iso_pu_bacteria 2684623153 2686997978 314
109 iso_pu_bacteria 2687453109 2687499321 314
110 iso_pu_bacteria 2808606399 2809056263 314
111 iso_pu_bacteria 2811994870 2812317174 314
112 iso_pu_bacteria 2816332295 2817481272 314
113 iso_pu_bacteria 2818991468 2819724253 314
114 iso_pu_bacteria 2823526263 2823529138 314
115 iso_pu_bacteria 2860837431 2860840675 314
116 iso_pu_bacteria 2908665501 2908667657 314
117 iso_pu_bacteria 2919093281 2919095451 314
118 iso_pu_bacteria 2919726948 2919728841 314
119 iso_pu_bacteria 2954773129 2954773320 314
120 iso_pu_bacteria 2962290636 2962293893 314
121 iso_pu_bacteria 2969136845 2969139880 314
122 iso_pu_bacteria 2969770375 2969772715 314
123 iso_pu_bacteria 2980492589 2980495669 314
124 iso_pu_bacteria 3006858327 3006861692 314
125 iso_pu_bacteria 3006879489 3006882147 314
126 iso_pu_bacteria 8022653035 8022654834 314
127 3300005564 Ga0070664_100355935 Ga0070664_1003559352 315
128 3300005981 Ga0081538_10042685 Ga0081538_100426852 315
129 3300048920 Ga0496117_0000540 Ga0496117_0000540_21444_22412 315
130 3300048929 Ga0496126_0021171 Ga0496126_0021171_194_1204 315
131 3300050491 nmdc:mga00v17_10502_c1 nmdc:mga00v17_10502_c1_2395_3363 315
132 iso_pu_bacteria 2643221543 2643741054 315
133 iso_pu_bacteria 2904755435 2904759729 315
134 iso_pu_bacteria 2906799679 2906803213 315
135 3300003187 JGI25151J46595_10000046 JGI25151J46595_1000004674 316
136 3300003578 Ga0006562J51391_1008346 Ga0006562J51391_10083462 316
137 3300025294 Ga0209025_1000001 Ga0209025_100000180 316
138 3300048919 Ga0496116_0018905 Ga0496116_0018905_1797_2762 316
139 3300048919 Ga0496116_0121148 Ga0496116_0121148_400_1356 316
140 3300048924 Ga0496121_0161837 Ga0496121_0161837_37_1002 316
141 3300048927 Ga0496124_0102731 Ga0496124_0102731_976_1941 316
142 3300053149 Ga0500600_0022173 Ga0500600_0022173_69_1061 316
143 iso_pu_bacteria 2593339198 2595315427 316
144 iso_pu_bacteria 2857453340 2857454707 316
145 iso_pu_bacteria 2971410472 2971413131 316
146 iso_pu_bacteria 8054795415 8054799190 316
147 iso_pu_bacteria 8056533031 8056538259 316
148 3300005347 Ga0070668_100006166 Ga0070668_1000061669 317
149 3300025972 Ga0207668_10012601 Ga0207668_100126012 317
150 iso_pu_bacteria 2675903060 2676493233 317
151 iso_pu_bacteria 2818991459 2819672362 317
152 iso_pu_bacteria 2945920336 2945922102 317
153 iso_pu_bacteria 2946037020 2946037647 317
154 iso_pu_bacteria 2946059875 2946061433 317
155 3300003320 rootH2_10084242 rootH2_100842422 318
156 3300041451 Ga0451791_1744671 Ga0451791_1744671_954_1946 318
157 iso_pu_bacteria 2775506735 2775655688 318
158 iso_pu_bacteria 2808606357 2808828421 318
159 iso_pu_bacteria 2808606360 2808849661 318
160 iso_pu_bacteria 2808606366 2808877745 318
161 iso_pu_bacteria 2811994871 2812319862 318
162 iso_pu_bacteria 2895427314 2895430710 318
163 iso_pu_bacteria 2910809715 2910812388 318
164 iso_pu_bacteria 2919538618 2919541197 318
165 iso_pu_bacteria 2932426870 2932427350 318
166 iso_pu_bacteria 2939674588 2939676796 318
167 iso_pu_bacteria 2945916053 2945917612 318
168 3300003187 JGI25151J46595_10008891 JGI25151J46595_100088914 319
169 3300003316 rootH1_10034649 rootH1_100346493 319
170 3300003751 Ga0055538_1000788 Ga0055538_10007883 319
171 3300003761 Ga0055535_1004758 Ga0055535_10047583 319
172 3300025224 Ga0209784_100103 Ga0209784_10010328 319
173 3300035091 Ga0373951_0000736 Ga0373951_0000736_4107_5072 319
174 3300037418 Ga0395900_0309990 Ga0395900_0309990_552_1520 319
175 3300048911 Ga0496108_0000115 Ga0496108_0000115_62416_63381 319
176 iso_pu_bacteria 2974302888 2974305675 319
177 3300031456 Ga0307513_10000003 Ga0307513_10000003344 320
178 3300035242 Ga0373962_0000895 Ga0373962_0000895_1357_2325 320
179 3300048919 Ga0496116_0110886 Ga0496116_0110886_479_1447 320
180 3300049574 Ga0501038_0176708 Ga0501038_0176708_540_1508 320
181 iso_pu_bacteria 2919425241 2919427667 320
182 3300003841 Ga0055541_1000166 Ga0055541_10001668 321
183 3300025294 Ga0209025_1027585 Ga0209025_10275852 321
184 3300031548 Ga0307408_100118823 Ga0307408_1001188232 321
185 3300031730 Ga0307516_10002758 Ga0307516_1000275811 321
186 3300031824 Ga0307413_10024764 Ga0307413_100247642 321
187 3300031852 Ga0307410_10243173 Ga0307410_102431732 321
188 3300031901 Ga0307406_10098391 Ga0307406_100983912 321
189 3300031903 Ga0307407_10012658 Ga0307407_100126582 321
190 3300031995 Ga0307409_100030705 Ga0307409_1000307053 321
191 3300032002 Ga0307416_100146026 Ga0307416_1001460262 321
192 3300048928 Ga0496125_0021811 Ga0496125_0021811_1112_2101 321
193 3300049661 Ga0501217_026274 Ga0501217_026274_396_1367 321
194 3300049704 Ga0501221_007133 Ga0501221_007133_814_1785 321
195 iso_pu_bacteria 2512564039 2512734441 321
196 3300013104 Ga0157370_10137906 Ga0157370_101379062 322
197 3300013105 Ga0157369_10076392 Ga0157369_100763923 322
198 3300025225 Ga0209566_101217 Ga0209566_1012173 322
199 3300025901 Ga0207688_10066357 Ga0207688_100663572 322
200 3300031548 Ga0307408_100011434 Ga0307408_1000114342 322
201 3300031548 Ga0307408_100032163 Ga0307408_1000321633 322
202 3300031731 Ga0307405_10134046 Ga0307405_101340462 322
203 3300031901 Ga0307406_10092958 Ga0307406_100929582 322
204 3300031903 Ga0307407_10132831 Ga0307407_101328312 322
205 3300031911 Ga0307412_10002945 Ga0307412_100029458 322
206 3300031911 Ga0307412_10329784 Ga0307412_103297841 322
207 3300031995 Ga0307409_100200385 Ga0307409_1002003852 322
208 3300032002 Ga0307416_100040751 Ga0307416_1000407512 322
209 3300037312 Ga0395899_0100703 Ga0395899_0100703_535_1509 322
210 3300037466 Ga0395898_0041821 Ga0395898_0041821_1165_2139 322
211 3300037471 Ga0395905_0227201 Ga0395905_0227201_435_1409 322
212 3300038443 Ga0395901_0017466 Ga0395901_0017466_1696_2670 322
213 3300038443 Ga0395901_0039374 Ga0395901_0039374_1637_2611 322
214 3300049568 Ga0501031_0012600 Ga0501031_0012600_804_1799 322
215 3300049569 Ga0501032_0006982 Ga0501032_0006982_6811_7785 322
216 3300049569 Ga0501032_0013822 Ga0501032_0013822_3101_4096 322
217 3300049570 Ga0501033_0015393 Ga0501033_0015393_2700_3695 322
218 3300049570 Ga0501033_0015576 Ga0501033_0015576_983_1978 322
219 3300049570 Ga0501033_0039430 Ga0501033_0039430_1714_2709 322
220 3300049571 Ga0501034_0000042 Ga0501034_0000042_207552_208526 322
221 3300049571 Ga0501034_0055627 Ga0501034_0055627_137_1132 322
222 3300049572 Ga0501036_0006097 Ga0501036_0006097_618_1613 322
223 3300049575 Ga0501039_0007559 Ga0501039_0007559_622_1617 322
224 3300049578 Ga0501042_0050669 Ga0501042_0050669_1350_2345 322
225 3300049579 Ga0501043_0048740 Ga0501043_0048740_1653_2648 322
226 3300049579 Ga0501043_0204328 Ga0501043_0204328_169_1143 322
227 3300049580 Ga0501046_0013423 Ga0501046_0013423_4152_5147 322
228 3300049581 Ga0501047_0121116 Ga0501047_0121116_941_1936 322
229 3300049582 Ga0501048_0019919 Ga0501048_0019919_1657_2652 322
230 3300049584 Ga0501068_0025424 Ga0501068_0025424_1872_2867 322
231 3300049590 Ga0501074_0057740 Ga0501074_0057740_1136_2131 322
232 3300049741 Ga0501079_0253152 Ga0501079_0253152_342_1337 322
233 3300049822 Ga0501035_0466181 Ga0501035_0466181_16_1011 322
234 3300049823 Ga0501044_0027173 Ga0501044_0027173_4562_5557 322
235 3300049823 Ga0501044_0032351 Ga0501044_0032351_998_1993 322
236 3300049823 Ga0501044_0453894 Ga0501044_0453894_181_1155 322
237 3300049824 Ga0501045_0052893 Ga0501045_0052893_1703_2698 322
238 iso_pu_bacteria 2919059106 2919059196 322
239 iso_pu_bacteria 2939647034 2939650434 322
240 3300031824 Ga0307413_10037538 Ga0307413_100375382 323
241 3300035088 Ga0373940_0008030 Ga0373940_0008030_633_1610 323
242 3300035207 Ga0373942_0001541 Ga0373942_0001541_3067_4044 323
243 3300049569 Ga0501032_0001532 Ga0501032_0001532_5300_6277 323
244 3300049573 Ga0501037_0020171 Ga0501037_0020171_573_1550 323
245 3300049578 Ga0501042_0006823 Ga0501042_0006823_6224_7207 324
246 3300030522 Ga0307512_10021072 Ga0307512_100210722 325
247 3300049823 Ga0501044_0152954 Ga0501044_0152954_225_1211 325
248 3300053159 Ga0500630_024707 Ga0500630_024707_36_1019 325
249 3300031456 Ga0307513_10166619 Ga0307513_101666193 326
250 iso_pu_bacteria 2816332119 2816426690 326
251 3300003203 JGI25406J46586_10005105 JGI25406J46586_100051053 328
252 3300005985 Ga0081539_10002010 Ga0081539_1000201020 328
253 3300017792 Ga0163161_10340184 Ga0163161_103401842 328
254 3300028794 Ga0307515_10000149 Ga0307515_10000149128 328
255 3300028794 Ga0307515_10054368 Ga0307515_100543682 328
256 3300005334 Ga0068869_100031896 Ga0068869_1000318963 329
257 3300025927 Ga0207687_10290254 Ga0207687_102902541 329
258 3300028786 Ga0307517_10181904 Ga0307517_101819042 329
259 3300028794 Ga0307515_10005180 Ga0307515_1000518024 329
260 3300030522 Ga0307512_10014145 Ga0307512_100141451 329
261 3300031456 Ga0307513_10008322 Ga0307513_100083224 329
262 3300031616 Ga0307508_10005508 Ga0307508_100055089 329
263 3300049661 Ga0501217_009705 Ga0501217_009705_674_1693 329
264 3300001979 JGI24740J21852_10014149 JGI24740J21852_100141493 330
265 3300001989 JGI24739J22299_10006900 JGI24739J22299_100069003 330
266 3300005577 Ga0068857_100118960 Ga0068857_1001189602 330
267 3300005937 Ga0081455_10062618 Ga0081455_100626183 330
268 3300010375 Ga0105239_10280686 Ga0105239_102806862 330
269 3300013307 Ga0157372_10035368 Ga0157372_100353684 330
270 3300025904 Ga0207647_10001976 Ga0207647_100019763 330
271 3300026116 Ga0207674_10015518 Ga0207674_100155184 330
272 3300028381 Ga0268264_10384364 Ga0268264_103843642 330
273 3300031731 Ga0307405_10184279 Ga0307405_101842792 330
274 3300038443 Ga0395901_0221893 Ga0395901_0221893_64_1065 330

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00528

BPD_transp_1

Binding-protein-dependent transport system inner membrane component

157

366

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4xtc-assembly1.cif.gz_M crystal structure of bacterial alginate abc transporter in complex with alginate pentasaccharide-bound periplasmic protein 0.8981 34 329
4tqv-assembly4.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.8946 32 326
4tqu-assembly1.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.8941 32 326
4tqv-assembly4.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.8857 32 326
4tqu-assembly1.cif.gz_M crystal structure of a bacterial abc transporter involved in the import of the acidic polysaccharide alginate 0.8852 32 326
ID Description Score Start End Superfamily
4tquM01 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9381 82 326 1.10.3720.10
4tquM01 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.9308 82 326 1.10.3720.10
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8829 82 325 1.10.3720.10
af_O53484_49_294_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8695 82 325 1.10.3720.10
af_P71896_49_286_1.10.3720.10 Mainly Alpha;Orthogonal Bundle;MetI-like fold;MetI-like 0.8589 81 323 1.10.3720.10
ID Description Score Start End GO Terms
AF-A0A496NVL1-F1-model_v4 deleted 0.9717 194 324
AF-A0A6C0G7T3-F1-model_v4 ABC transporter permease subunit 0.9636 209 330 GO:0005886
GO:0055085
AF-A0A3B9ZC54-F1-model_v4 Protein lplB 0.951 160 330 GO:0005886
GO:0055085
AF-A0A7C6Z1X4-F1-model_v4 Sugar ABC transporter permease 0.9488 172 330 GO:0005886
GO:0055085
AF-A0A6C0G7T3-F1-model_v4 ABC transporter permease subunit 0.9485 209 330 GO:0005886
GO:0055085

Feature Viewer

pLDDT pTM Quality
81.19 0.73 High
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Predicted Structure (AlphaFold2)

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