F379696

General Info

Members Datasets Scaffolds Average Seq Length
274 157 548 234

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10012662|Ga0105248_100126627
Length 235
Sequence MSRKSGKKYSAAAQQIEQKPYSVEEAVPLVQKVKYAKFDETVELHLRLGVDPKHADQMVRGTIVLPNGLGKSKKVLVIASGDKQREATEAGADIVGGDDMVAKIQTENWTDFDAVIATPDMMRSVGRLGKVLGPRGLMPNPKTGTVTNDVATAVKEIKAGKVEFRVDKTGVIHVPVGKVSFTSQKLVENANTLLQAVVKAKPAAAKGKYMRTATMCSTMGPGVHLDVSPFNLKLI

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
84 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
87 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
88 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
89 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
90 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
91 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
92 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
93 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
94 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
95 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
96 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
97 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300034818 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3 Metagenome Rhizosphere
99 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
100 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
101 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
102 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
107 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
108 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
113 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
116 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
117 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
118 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
119 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
120 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
121 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
140 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
141 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
147 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
150 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
151 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
154 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
155 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
156 3300059639 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 3R_CW_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.18
Metatranscriptomes 1.82
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.27
Stem 0
Stem Tuber 0
Unclassified 1.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10012662 3300009177 Bacteria 9308
2 Ga0058859_10108115 3300004798 Bacteria 2373
3 Ga0070690_100028743 3300005330 Bacteria 3445
4 Ga0070690_100093464 3300005330 Bacteria 1984
5 Ga0070670_100024574 3300005331 Bacteria 5180
6 Ga0070677_10054653 3300005333 Bacteria 1627
7 Ga0068868_100204943 3300005338 Bacteria 1646
8 Ga0068868_100566428 3300005338 Bacteria 1003
9 Ga0070689_100101836 3300005340 Bacteria 2274
10 Ga0070689_100492726 3300005340 Bacteria 1049
11 Ga0070687_100011759 3300005343 Bacteria 3840
12 Ga0070661_100523118 3300005344 Bacteria 952
13 Ga0070669_100004517 3300005353 Bacteria 10040
14 Ga0070675_100410456 3300005354 Bacteria 1209
15 Ga0070673_100094855 3300005364 Bacteria 2446
16 Ga0070688_100079155 3300005365 Bacteria 2122
17 Ga0070688_100113619 3300005365 Bacteria 1804
18 Ga0070701_10038790 3300005438 Bacteria 2413
19 Ga0070701_10107407 3300005438 Bacteria 1555
20 Ga0070705_100177660 3300005440 Bacteria 1439
21 Ga0070705_100478477 3300005440 Bacteria 940
22 Ga0070700_100252983 3300005441 Bacteria 1264
23 Ga0070694_100048168 3300005444 Bacteria 2866
24 Ga0070694_100072554 3300005444 Bacteria 2375
25 Ga0070708_100185903 3300005445 Bacteria 1943
26 Ga0070708_100698355 3300005445 Bacteria 955
27 Ga0070678_100021572 3300005456 Bacteria 4250
28 Ga0068867_100040978 3300005459 Bacteria 3383
29 Ga0070685_10090491 3300005466 Bacteria 1851
30 Ga0070685_10136257 3300005466 Bacteria 1541
31 Ga0070706_100070785 3300005467 Bacteria 3226
32 Ga0070706_100148974 3300005467 Bacteria 2185
33 Ga0070707_100005296 3300005468 Bacteria 12074
34 Ga0070707_100038882 3300005468 Bacteria 4545
35 Ga0070707_100058294 3300005468 Bacteria 3704
36 Ga0070707_100101222 3300005468 Bacteria 2792
37 Ga0070698_100076498 3300005471 Bacteria 3349
38 Ga0070699_100022206 3300005518 Bacteria 5466
39 Ga0070699_100101186 3300005518 Bacteria 2526
40 Ga0070699_100338402 3300005518 Bacteria 1354
41 Ga0070679_100325645 3300005530 Bacteria 1485
42 Ga0070697_100094150 3300005536 Bacteria 2482
43 Ga0070686_100024814 3300005544 Bacteria 3597
44 Ga0070686_100424167 3300005544 Bacteria 1017
45 Ga0070695_100006106 3300005545 Bacteria 7119
46 Ga0070695_100118516 3300005545 Bacteria 1808
47 Ga0070704_100058343 3300005549 Bacteria 2749
48 Ga0070704_100064872 3300005549 Bacteria 2627
49 Ga0070704_100172890 3300005549 Bacteria 1720
50 Ga0070704_100345261 3300005549 Bacteria 1255
51 Ga0070704_100670998 3300005549 Bacteria 917
52 Ga0068859_100000840 3300005617 Bacteria 31198
53 Ga0068859_100037026 3300005617 Bacteria 4897
54 Ga0068859_100195525 3300005617 Bacteria 2107
55 Ga0068859_100322150 3300005617 Bacteria 1640
56 Ga0068861_100046530 3300005719 Bacteria 3271
57 Ga0068861_100085703 3300005719 Bacteria 2475
58 Ga0068861_100122827 3300005719 Bacteria 2097
59 Ga0068863_100059485 3300005841 Bacteria 3614
60 Ga0068858_100630584 3300005842 Bacteria 1041
61 Ga0068862_100030047 3300005844 Bacteria 4579
62 Ga0068862_100165433 3300005844 Bacteria 1977
63 Ga0068862_100383879 3300005844 Bacteria 1311
64 Ga0068862_100697851 3300005844 Bacteria 983
65 Ga0070715_10139156 3300006163 Unclassified 1177
66 Ga0097621_100157878 3300006237 Bacteria 1948
67 Ga0068871_100033790 3300006358 Bacteria 4052
68 Ga0068871_100173391 3300006358 Bacteria 1850
69 Ga0075428_100029269 3300006844 Bacteria 6094
70 Ga0075428_100039920 3300006844 Bacteria 5166
71 Ga0075428_100205418 3300006844 Bacteria 2129
72 Ga0075431_100014086 3300006847 Bacteria 8084
73 Ga0075431_100208163 3300006847 Bacteria 1999
74 Ga0075433_10033580 3300006852 Bacteria 4400
75 Ga0075433_10301557 3300006852 Bacteria 1419
76 Ga0075434_100007076 3300006871 Bacteria 10358
77 Ga0075434_100014096 3300006871 Bacteria 7634
78 Ga0075434_100044962 3300006871 Bacteria 4380
79 Ga0075434_100134030 3300006871 Bacteria 2497
80 Ga0075429_100074346 3300006880 Bacteria 2960
81 Ga0075436_100018070 3300006914 Bacteria 4828
82 Ga0075436_100196754 3300006914 Bacteria 1427
83 Ga0075436_100531004 3300006914 Bacteria 863
84 Ga0097620_100000840 3300006931 Bacteria 31198
85 Ga0097620_100037024 3300006931 Bacteria 4897
86 Ga0097620_100195536 3300006931 Bacteria 2107
87 Ga0097620_100322149 3300006931 Bacteria 1640
88 Ga0075435_100024698 3300007076 Bacteria 4667
89 Ga0075435_100129015 3300007076 Bacteria 2115
90 Ga0111539_10051057 3300009094 Bacteria 4926
91 Ga0111539_10066486 3300009094 Bacteria 4258
92 Ga0111539_10087047 3300009094 Bacteria 3671
93 Ga0111539_10166012 3300009094 Bacteria 2581
94 Ga0111539_10462613 3300009094 Bacteria 1477
95 Ga0105245_10099916 3300009098 Bacteria 2683
96 Ga0105247_10480761 3300009101 Bacteria 901
97 Ga0114129_10051021 3300009147 Bacteria 5809
98 Ga0114129_10242045 3300009147 Bacteria 2425
99 Ga0105242_10147772 3300009176 Bacteria 2046
100 Ga0105248_10086047 3300009177 Bacteria 3536
101 Ga0105246_10236562 3300011119 Bacteria 1441
102 Ga0157378_10020467 3300013297 Bacteria 5817
103 Ga0163162_10092253 3300013306 Bacteria 3112
104 Ga0157375_10149582 3300013308 Bacteria 2469
105 Ga0157380_10076648 3300014326 Bacteria 2722
106 Ga0157380_10314803 3300014326 Bacteria 1448
107 Ga0157379_10581288 3300014968 Bacteria 1044
108 Ga0157376_10053330 3300014969 Bacteria 3366
109 Ga0163161_10076468 3300017792 Bacteria 2457
110 Ga0207685_10003300 3300025905 Bacteria 3901
111 Ga0207684_10041213 3300025910 Bacteria 3916
112 Ga0207684_10618282 3300025910 Bacteria 924
113 Ga0207662_10001242 3300025918 Bacteria 12237
114 Ga0207652_10267788 3300025921 Bacteria 1541
115 Ga0207646_10001176 3300025922 Bacteria 33023
116 Ga0207646_10045859 3300025922 Bacteria 3922
117 Ga0207646_10097570 3300025922 Bacteria 2633
118 Ga0207646_10152405 3300025922 Bacteria 2085
119 Ga0207681_10014486 3300025923 Bacteria 4901
120 Ga0207681_10432359 3300025923 Bacteria 1068
121 Ga0207650_10031097 3300025925 Bacteria 3852
122 Ga0207650_10047275 3300025925 Bacteria 3171
123 Ga0207644_10073253 3300025931 Bacteria 2511
124 Ga0207670_10058309 3300025936 Bacteria 2622
125 Ga0207670_10242367 3300025936 Bacteria 1389
126 Ga0207665_10427013 3300025939 Bacteria 1013
127 Ga0207665_10525063 3300025939 Bacteria 917
128 Ga0207711_10097299 3300025941 Bacteria 2599
129 Ga0207711_10183180 3300025941 Bacteria 1905
130 Ga0207689_10165845 3300025942 Bacteria 1820
131 Ga0207679_10081126 3300025945 Bacteria 2479
132 Ga0207658_10095568 3300025986 Bacteria 2316
133 Ga0207677_10465929 3300026023 Bacteria 1086
134 Ga0207708_10207785 3300026075 Bacteria 1564
135 Ga0207641_10046806 3300026088 Bacteria 3646
136 Ga0207648_10158229 3300026089 Bacteria 2000
137 Ga0207674_10151341 3300026116 Bacteria 2277
138 Ga0207674_10362382 3300026116 Unclassified 1401
139 Ga0207674_10809914 3300026116 Bacteria 904
140 Ga0207675_100046541 3300026118 Bacteria 4053
141 Ga0207675_100241223 3300026118 Bacteria 1747
142 Ga0207683_10018494 3300026121 Bacteria 5946
143 Ga0207428_10105669 3300027907 Bacteria 2171
144 Ga0207428_10162506 3300027907 Bacteria 1695
145 Ga0268265_10007163 3300028380 Bacteria 7535
146 Ga0268265_10090964 3300028380 Bacteria 2439
147 Ga0268265_10477573 3300028380 Bacteria 1170
148 Ga0265319_1023707 3300028563 Bacteria 2220
149 Ga0265334_10030953 3300028573 Bacteria 2140
150 Ga0265338_10029761 3300028800 Bacteria 5404
151 Ga0265338_10035566 3300028800 Bacteria 4784
152 Ga0265338_10052213 3300028800 Bacteria 3672
153 Ga0265332_10000091 3300031238 Bacteria 79169
154 Ga0265328_10017975 3300031239 Bacteria 2732
155 Ga0265339_10051742 3300031249 Bacteria 2240
156 Ga0265331_10000018 3300031250 Bacteria 264804
157 Ga0265327_10067000 3300031251 Bacteria 1810
158 Ga0265316_10002230 3300031344 Bacteria 20322
159 Ga0265316_10071462 3300031344 Bacteria 2675
160 Ga0265316_10150435 3300031344 Bacteria 1744
161 Ga0316579_10098676 3300031691 Bacteria 1398
162 Ga0265314_10000060 3300031711 Bacteria 161657
163 Ga0265342_10006528 3300031712 Bacteria 8679
164 Ga0316576_10240840 3300031727 Bacteria 1359
165 Ga0316577_10042935 3300031733 Bacteria 2530
166 Ga0316593_10020465 3300032168 Bacteria 2057
167 Ga0316593_10031820 3300032168 Bacteria 1721
168 Ga0373950_0015008 3300034818 Bacteria 1310
169 Ga0373958_0028809 3300034819 Bacteria 1077
170 Ga0373934_0000155 3300035086 Bacteria 24945
171 Ga0373952_0020839 3300035092 Bacteria 1378
172 Ga0373923_0030112 3300035111 Bacteria 2181
173 Ga0373936_0019872 3300035113 Bacteria 2606
174 Ga0373953_0026889 3300035117 Bacteria 2207
175 Ga0373954_0048991 3300035118 Bacteria 1980
176 Ga0373956_0002379 3300035119 Bacteria 7684
177 Ga0373957_0031845 3300035120 Bacteria 1939
178 Ga0373955_0019792 3300035172 Bacteria 3370
179 Ga0373955_0110536 3300035172 Bacteria 1589
180 Ga0373931_0241816 3300035691 Bacteria 1094
181 Ga0373933_0037442 3300035724 Bacteria 2845
182 Ga0373937_0018806 3300036401 Bacteria 6175
183 Ga0373937_0257765 3300036401 Bacteria 1644
184 Ga0373937_0416766 3300036401 Bacteria 1275
185 Ga0316582_0042688 3300036647 Unclassified 2842
186 Ga0316584_0000052 3300036712 Bacteria 43399
187 Ga0373925_0301098 3300037068 Bacteria 1295
188 Ga0395905_0034402 3300037471 Bacteria 4758
189 Ga0436365_0736961 3300039437 Bacteria 3198
190 Ga0451577_0017249 3300042876 Bacteria 6675
191 Ga0451577_0024271 3300042876 Bacteria 5517
192 Ga0451577_0061827 3300042876 Bacteria 3339
193 Ga0451577_0066807 3300042876 Bacteria 3206
194 Ga0451577_0280116 3300042876 Bacteria 1511
195 Ga0451577_0356298 3300042876 Bacteria 1327
196 Ga0453683_0277899 3300044673 Bacteria 1069
197 Ga0453683_0536634 3300044673 Bacteria 761
198 Ga0453684_0068415 3300044712 Bacteria 4509
199 Ga0453684_0098987 3300044712 Bacteria 3573
200 Ga0453684_0104377 3300044712 Bacteria 3460
201 Ga0453684_0239802 3300044712 Bacteria 2088
202 Ga0453684_0386196 3300044712 Bacteria 1571
203 Ga0453684_0663355 3300044712 Bacteria 1137
204 Ga0453684_1059618 3300044712 Bacteria 859
205 Ga0453684_1237686 3300044712 Bacteria 782
206 Ga0451576_0002472 3300045051 Bacteria 27495
207 Ga0451576_0002618 3300045051 Bacteria 26336
208 Ga0451576_0013387 3300045051 Bacteria 9177
209 Ga0451576_0013609 3300045051 Bacteria 9093
210 Ga0451576_0021519 3300045051 Bacteria 7010
211 Ga0451576_0036698 3300045051 Bacteria 5194
212 Ga0451576_0354745 3300045051 Bacteria 1535
213 Ga0451576_0376835 3300045051 Bacteria 1487
214 Ga0451576_0578233 3300045051 Bacteria 1180
215 Ga0451576_0641073 3300045051 Bacteria 1116
216 Ga0451576_0759803 3300045051 Bacteria 1018
217 Ga0451576_1088539 3300045051 Unclassified 836
218 Ga0495592_0048815 3300046454 Bacteria 3147
219 Ga0495592_0158680 3300046454 Bacteria 1558
220 Ga0495603_0096681 3300046455 Bacteria 1725
221 Ga0495651_0086091 3300046462 Bacteria 2365
222 Ga0495653_0078203 3300046463 Bacteria 2454
223 Ga0495596_0092680 3300046500 Bacteria 1173
224 Ga0495608_0010081 3300046511 Bacteria 6592
225 Ga0495618_0000743 3300046514 Bacteria 22768
226 Ga0495628_0038502 3300046516 Bacteria 3827
227 Ga0495628_0069270 3300046516 Bacteria 2751
228 Ga0495628_0101738 3300046516 Bacteria 2217
229 Ga0495630_0107396 3300046517 Bacteria 2114
230 Ga0495652_0197239 3300046529 Bacteria 1531
231 Ga0495587_0015907 3300046536 Bacteria 4686
232 Ga0495598_0019924 3300046537 Bacteria 1765
233 Ga0495645_0502573 3300046543 Bacteria 758
234 Ga0495622_0060478 3300046557 Bacteria 1754
235 Ga0495667_0006622 3300046559 Bacteria 7865
236 Ga0495634_0251713 3300046642 Bacteria 1080
237 Ga0495635_0033708 3300046663 Bacteria 3552
238 Ga0495635_0059518 3300046663 Bacteria 2627
239 Ga0495657_0018348 3300046675 Bacteria 5067
240 Ga0495600_0027945 3300046809 Bacteria 3648
241 Ga0495604_0130950 3300047317 Bacteria 1803
242 Ga0495604_0301407 3300047317 Bacteria 1076
243 Ga0501306_016222 3300049127 Bacteria 998
244 Ga0501034_0025112 3300049571 Bacteria 6064
245 Ga0501075_0074678 3300049591 Bacteria 2564
246 Ga0501075_0554147 3300049591 Bacteria 877
247 Ga0501076_0325548 3300049592 Bacteria 1261
248 Ga0501079_0057078 3300049741 Bacteria 3013
249 Ga0501079_0074271 3300049741 Bacteria 2628
250 nmdc:mga05p37_498399_c1 3300050507 Bacteria 1398
251 nmdc:mga09592_20930_c1 3300050508 Bacteria 5386
252 nmdc:mga09592_2536_c1 3300050508 Bacteria 14783
253 nmdc:mga06r32_11200_c1 3300050510 Bacteria 8080
254 nmdc:mga06r32_172097_c1 3300050510 Bacteria 2149
255 nmdc:mga08y16_248576_c1 3300050511 Bacteria 1838
256 nmdc:mga08y16_52626_c1 3300050511 Bacteria 4259
257 nmdc:mga08y16_680194_c1 3300050511 Bacteria 1031
258 nmdc:mga08y16_75065_c1 3300050511 Bacteria 3524
259 nmdc:mga0n895_145405_c1 3300050512 Bacteria 2400
260 nmdc:mga0n895_165691_c1 3300050512 Bacteria 2242
261 nmdc:mga0n895_6816_c1 3300050512 Bacteria 9752
262 nmdc:mga0n895_7181_c1 3300050512 Bacteria 9531
263 nmdc:mga0n895_735142_c1 3300050512 Bacteria 981
264 nmdc:mga0rr50_8536_c1 3300050513 Bacteria 6382
265 nmdc:mga08x19_13153_c1 3300050514 Bacteria 4998
266 nmdc:mga08x19_372072_c1 3300050514 Bacteria 1000
267 nmdc:mga08x19_70185_c1 3300050514 Bacteria 2282
268 nmdc:mga0a205_306687_c1 3300050515 Bacteria 1460
269 nmdc:mga0a205_48594_c1 3300050515 Bacteria 4095
270 nmdc:mga0a205_89615_c1 3300050515 Bacteria 2973
271 Ga0495595_0002299 3300053084 Bacteria 7449
272 Ga0501084_0429798 3300054114 Bacteria 1116
273 Ga0587062_020637 3300059639 Bacteria 930
274 Ga0530510_0693641 3300061734 Bacteria 776
275 Ga0105248_10012662
276 Ga0058859_10108115
277 Ga0070690_100028743
278 Ga0070690_100093464
279 Ga0070670_100024574
280 Ga0070677_10054653
281 Ga0068868_100204943
282 Ga0068868_100566428
283 Ga0070689_100101836
284 Ga0070689_100492726
285 Ga0070687_100011759
286 Ga0070661_100523118
287 Ga0070669_100004517
288 Ga0070675_100410456
289 Ga0070673_100094855
290 Ga0070688_100079155
291 Ga0070688_100113619
292 Ga0070701_10038790
293 Ga0070701_10107407
294 Ga0070705_100177660
295 Ga0070705_100478477
296 Ga0070700_100252983
297 Ga0070694_100048168
298 Ga0070694_100072554
299 Ga0070708_100185903
300 Ga0070708_100698355
301 Ga0070678_100021572
302 Ga0068867_100040978
303 Ga0070685_10090491
304 Ga0070685_10136257
305 Ga0070706_100070785
306 Ga0070706_100148974
307 Ga0070707_100005296
308 Ga0070707_100038882
309 Ga0070707_100058294
310 Ga0070707_100101222
311 Ga0070698_100076498
312 Ga0070699_100022206
313 Ga0070699_100101186
314 Ga0070699_100338402
315 Ga0070679_100325645
316 Ga0070697_100094150
317 Ga0070686_100024814
318 Ga0070686_100424167
319 Ga0070695_100006106
320 Ga0070695_100118516
321 Ga0070704_100058343
322 Ga0070704_100064872
323 Ga0070704_100172890
324 Ga0070704_100345261
325 Ga0070704_100670998
326 Ga0068859_100000840
327 Ga0068859_100037026
328 Ga0068859_100195525
329 Ga0068859_100322150
330 Ga0068861_100046530
331 Ga0068861_100085703
332 Ga0068861_100122827
333 Ga0068863_100059485
334 Ga0068858_100630584
335 Ga0068862_100030047
336 Ga0068862_100165433
337 Ga0068862_100383879
338 Ga0068862_100697851
339 Ga0070715_10139156
340 Ga0097621_100157878
341 Ga0068871_100033790
342 Ga0068871_100173391
343 Ga0075428_100029269
344 Ga0075428_100039920
345 Ga0075428_100205418
346 Ga0075431_100014086
347 Ga0075431_100208163
348 Ga0075433_10033580
349 Ga0075433_10301557
350 Ga0075434_100007076
351 Ga0075434_100014096
352 Ga0075434_100044962
353 Ga0075434_100134030
354 Ga0075429_100074346
355 Ga0075436_100018070
356 Ga0075436_100196754
357 Ga0075436_100531004
358 Ga0097620_100000840
359 Ga0097620_100037024
360 Ga0097620_100195536
361 Ga0097620_100322149
362 Ga0075435_100024698
363 Ga0075435_100129015
364 Ga0111539_10051057
365 Ga0111539_10066486
366 Ga0111539_10087047
367 Ga0111539_10166012
368 Ga0111539_10462613
369 Ga0105245_10099916
370 Ga0105247_10480761
371 Ga0114129_10051021
372 Ga0114129_10242045
373 Ga0105242_10147772
374 Ga0105248_10086047
375 Ga0105246_10236562
376 Ga0157378_10020467
377 Ga0163162_10092253
378 Ga0157375_10149582
379 Ga0157380_10076648
380 Ga0157380_10314803
381 Ga0157379_10581288
382 Ga0157376_10053330
383 Ga0163161_10076468
384 Ga0207685_10003300
385 Ga0207684_10041213
386 Ga0207684_10618282
387 Ga0207662_10001242
388 Ga0207652_10267788
389 Ga0207646_10001176
390 Ga0207646_10045859
391 Ga0207646_10097570
392 Ga0207646_10152405
393 Ga0207681_10014486
394 Ga0207681_10432359
395 Ga0207650_10031097
396 Ga0207650_10047275
397 Ga0207644_10073253
398 Ga0207670_10058309
399 Ga0207670_10242367
400 Ga0207665_10427013
401 Ga0207665_10525063
402 Ga0207711_10097299
403 Ga0207711_10183180
404 Ga0207689_10165845
405 Ga0207679_10081126
406 Ga0207658_10095568
407 Ga0207677_10465929
408 Ga0207708_10207785
409 Ga0207641_10046806
410 Ga0207648_10158229
411 Ga0207674_10151341
412 Ga0207674_10362382
413 Ga0207674_10809914
414 Ga0207675_100046541
415 Ga0207675_100241223
416 Ga0207683_10018494
417 Ga0207428_10105669
418 Ga0207428_10162506
419 Ga0268265_10007163
420 Ga0268265_10090964
421 Ga0268265_10477573
422 Ga0265319_1023707
423 Ga0265334_10030953
424 Ga0265338_10029761
425 Ga0265338_10035566
426 Ga0265338_10052213
427 Ga0265332_10000091
428 Ga0265328_10017975
429 Ga0265339_10051742
430 Ga0265331_10000018
431 Ga0265327_10067000
432 Ga0265316_10002230
433 Ga0265316_10071462
434 Ga0265316_10150435
435 Ga0316579_10098676
436 Ga0265314_10000060
437 Ga0265342_10006528
438 Ga0316576_10240840
439 Ga0316577_10042935
440 Ga0316593_10020465
441 Ga0316593_10031820
442 Ga0373950_0015008
443 Ga0373958_0028809
444 Ga0373934_0000155
445 Ga0373952_0020839
446 Ga0373923_0030112
447 Ga0373936_0019872
448 Ga0373953_0026889
449 Ga0373954_0048991
450 Ga0373956_0002379
451 Ga0373957_0031845
452 Ga0373955_0019792
453 Ga0373955_0110536
454 Ga0373931_0241816
455 Ga0373933_0037442
456 Ga0373937_0018806
457 Ga0373937_0257765
458 Ga0373937_0416766
459 Ga0316582_0042688
460 Ga0316584_0000052
461 Ga0373925_0301098
462 Ga0395905_0034402
463 Ga0436365_0736961
464 Ga0451577_0017249
465 Ga0451577_0024271
466 Ga0451577_0061827
467 Ga0451577_0066807
468 Ga0451577_0280116
469 Ga0451577_0356298
470 Ga0453683_0277899
471 Ga0453683_0536634
472 Ga0453684_0068415
473 Ga0453684_0098987
474 Ga0453684_0104377
475 Ga0453684_0239802
476 Ga0453684_0386196
477 Ga0453684_0663355
478 Ga0453684_1059618
479 Ga0453684_1237686
480 Ga0451576_0002472
481 Ga0451576_0002618
482 Ga0451576_0013387
483 Ga0451576_0013609
484 Ga0451576_0021519
485 Ga0451576_0036698
486 Ga0451576_0354745
487 Ga0451576_0376835
488 Ga0451576_0578233
489 Ga0451576_0641073
490 Ga0451576_0759803
491 Ga0451576_1088539
492 Ga0495592_0048815
493 Ga0495592_0158680
494 Ga0495603_0096681
495 Ga0495651_0086091
496 Ga0495653_0078203
497 Ga0495596_0092680
498 Ga0495608_0010081
499 Ga0495618_0000743
500 Ga0495628_0038502
501 Ga0495628_0069270
502 Ga0495628_0101738
503 Ga0495630_0107396
504 Ga0495652_0197239
505 Ga0495587_0015907
506 Ga0495598_0019924
507 Ga0495645_0502573
508 Ga0495622_0060478
509 Ga0495667_0006622
510 Ga0495634_0251713
511 Ga0495635_0033708
512 Ga0495635_0059518
513 Ga0495657_0018348
514 Ga0495600_0027945
515 Ga0495604_0130950
516 Ga0495604_0301407
517 Ga0501306_016222
518 Ga0501034_0025112
519 Ga0501075_0074678
520 Ga0501075_0554147
521 Ga0501076_0325548
522 Ga0501079_0057078
523 Ga0501079_0074271
524 nmdc:mga05p37_498399_c1
525 nmdc:mga09592_20930_c1
526 nmdc:mga09592_2536_c1
527 nmdc:mga06r32_11200_c1
528 nmdc:mga06r32_172097_c1
529 nmdc:mga08y16_248576_c1
530 nmdc:mga08y16_52626_c1
531 nmdc:mga08y16_680194_c1
532 nmdc:mga08y16_75065_c1
533 nmdc:mga0n895_145405_c1
534 nmdc:mga0n895_165691_c1
535 nmdc:mga0n895_6816_c1
536 nmdc:mga0n895_7181_c1
537 nmdc:mga0n895_735142_c1
538 nmdc:mga0rr50_8536_c1
539 nmdc:mga08x19_13153_c1
540 nmdc:mga08x19_372072_c1
541 nmdc:mga08x19_70185_c1
542 nmdc:mga0a205_306687_c1
543 nmdc:mga0a205_48594_c1
544 nmdc:mga0a205_89615_c1
545 Ga0495595_0002299
546 Ga0501084_0429798
547 Ga0587062_020637
548 Ga0530510_0693641

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00687

Ribosomal_L1

Ribosomal protein L1p/L10e family

30

221

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qg3-assembly1.cif.gz_A crystal structure of mutant ribosomal protein g219v tthl1 in complex with 80nt 23s rna from thermus thermophilus 0.9628 2 226
5npm-assembly1.cif.gz_A crystal structure of mutant ribosomal protein tthl1 lacking 8 n-terminal residues in complex with 80nt 23s rna from thermus thermophilus 0.96 19 226
4v9h-assembly1.cif.gz_BC crystal structure of the ribosome bound to elongation factor g in the guanosine triphosphatase state 0.9597 3 226
4v8y-assembly1.cif.gz_CL cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic translation initiation complex 0.9597 3 226
4qvi-assembly1.cif.gz_A crystal structure of mutant ribosomal protein m218l tthl1 in complex with 80nt 23s rna from thermus thermophilus 0.9574 1 226
ID Description Score Start End Superfamily
af_Q60E59_194_280_3.40.50.790 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9953 74 160 3.40.50.790
af_Q60E59_194_280_3.40.50.790 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9841 74 160 3.40.50.790
af_P9WHC7_16_229_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9633 16 226 3.30.190.20
af_I1L5L1_126_340_3.30.190.20 Alpha Beta;2-Layer Sandwich;Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase;Ribosomal protein L1/L10, rRNA-binding domain 0.9617 23 229 3.30.190.20
1zhoG02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Ribosomal protein L1/L10, domain II 0.9561 69 160 3.40.50.790
ID Description Score Start End GO Terms
AF-A0A3C0R701-F1-model_v4 Ribosomal protein 0.9844 56 228 GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-A0A3N6GS38-F1-model_v4 deleted 0.983 59 228
AF-A0A6A5L9H4-F1-model_v4 deleted 0.9813 31 221
AF-A0A7Y5G994-F1-model_v4 Ribosomal protein 0.9813 62 234 GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843
AF-A0A3D3VUQ0-F1-model_v4 Ribosomal protein 0.9775 54 234 GO:0003735
GO:0006412
GO:0006417
GO:0015934
GO:0019843

Map