F379320

General Info

Members Datasets Scaffolds Average Seq Length
273 167 546 392

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0247303|Ga0501036_0247303_166_1350
Length 385
Sequence MPACSGPATVVFDPSLTEYDFGASHPMSPIRVDLTMRLARDLGVLDHLPAVAAPIASDDLIGTVHEEGLIEAVKRAGADPLGFEPAYGLGSDDNPVFADMHHAAAHVVGATYEAFRQVWSGESRHSASICGGLHHAMPDRASGFCIYNDVAVGIRALLGQGVERVAYVDVDVHHDDPRVLTISLHETGQALFPGTGFPPDCGRGDAAGTAVNVPLPPGTSDAGWLRAFHAVVPPLVREFAPDVLVSQHGCDSHRDDPLADLMLSVDGQRASYLAIHDLAHEVTDGRWVATGGGGYALVQVVPRAWTHLLAILSGRPLDPDTATPESWRAYVLETLGRTGPARMTDGRDPAYRDWSEGYDPGTWLDRSIMATREEIFPRHGLDPLP

Samples

Sample ID Description Type Environment
1 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
2 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
23 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
27 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
31 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
48 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
75 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
89 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
90 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
91 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
92 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
93 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
94 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
95 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
102 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
105 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
113 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
116 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
117 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
120 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
128 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
135 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
136 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
139 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
140 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
141 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
142 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
145 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
146 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
149 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
150 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
151 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
154 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
155 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
156 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
157 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
158 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
159 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
160 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
161 2643221615 Nocardioides sp. Root224 Isolate Unclassified
162 2643221641 Nocardioides sp. Root122 Isolate Unclassified
163 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
164 2739367898 Nocardioides sp. CF479 Isolate Unclassified
165 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
166 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
167 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.07
Metatranscriptomes 0.37
Isolates 2.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.23
Nodule 0.37
Rhizoplane 14.65
Rhizosphere 75.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501036_0247303 3300049572 Bacteria 1495
2 JGI24738J21930_10001704 3300002075 Bacteria 6016
3 Ga0070683_100048186 3300005329 Bacteria 3939
4 Ga0070683_100080499 3300005329 Bacteria 3049
5 Ga0070682_100009272 3300005337 Bacteria 5569
6 Ga0070660_100035711 3300005339 Bacteria 3763
7 Ga0070692_10103720 3300005345 Bacteria 1563
8 Ga0070675_100075905 3300005354 Bacteria 2794
9 Ga0070673_100174168 3300005364 Bacteria 1838
10 Ga0070688_100106904 3300005365 Bacteria 1854
11 Ga0070659_100026332 3300005366 Bacteria 4474
12 Ga0070701_10001001 3300005438 Bacteria 10275
13 Ga0070700_100002019 3300005441 Bacteria 10310
14 Ga0070663_100055772 3300005455 Bacteria 2830
15 Ga0068867_100040711 3300005459 Bacteria 3393
16 Ga0070685_10013162 3300005466 Bacteria 4357
17 Ga0070679_100003669 3300005530 Bacteria 14059
18 Ga0070684_100014767 3300005535 Bacteria 6338
19 Ga0070684_100170505 3300005535 Bacteria 1977
20 Ga0070684_100182739 3300005535 Bacteria 1907
21 Ga0070684_100206985 3300005535 Bacteria 1788
22 Ga0070686_100044938 3300005544 Bacteria 2780
23 Ga0070665_100024887 3300005548 Bacteria 6032
24 Ga0070665_100070211 3300005548 Bacteria 3510
25 Ga0070664_100005522 3300005564 Bacteria 10150
26 Ga0070664_100100158 3300005564 Bacteria 2519
27 Ga0068857_100034599 3300005577 Bacteria 4468
28 Ga0068857_100110367 3300005577 Bacteria 2472
29 Ga0070702_100006901 3300005615 Bacteria 5407
30 Ga0068852_100016291 3300005616 Bacteria 5791
31 Ga0068864_100041849 3300005618 Bacteria 3919
32 Ga0068861_100014298 3300005719 Bacteria 5568
33 Ga0068861_100104520 3300005719 Bacteria 2259
34 Ga0068870_10000683 3300005840 Bacteria 12981
35 Ga0068858_100021960 3300005842 Bacteria 5961
36 Ga0081538_10000308 3300005981 Bacteria 56278
37 Ga0075365_10020250 3300006038 Bacteria 4121
38 Ga0075365_10094245 3300006038 Bacteria 2043
39 Ga0075363_100007514 3300006048 Bacteria 5018
40 Ga0075364_10003739 3300006051 Bacteria 8690
41 Ga0075364_10029363 3300006051 Bacteria 3526
42 Ga0075367_10007895 3300006178 Bacteria 5481
43 Ga0075370_10002608 3300006353 Bacteria 8408
44 Ga0068865_100011282 3300006881 Bacteria 5589
45 Ga0105245_10038160 3300009098 Bacteria 4273
46 Ga0114129_10059118 3300009147 Bacteria 5359
47 Ga0105243_10003971 3300009148 Bacteria 11795
48 Ga0105242_10055863 3300009176 Bacteria 3230
49 Ga0105238_10121124 3300009551 Bacteria 2595
50 Ga0105249_10036311 3300009553 Bacteria 4470
51 Ga0105249_10072831 3300009553 Bacteria 3177
52 Ga0105249_10202286 3300009553 Bacteria 1944
53 Ga0105246_10083196 3300011119 Bacteria 2286
54 Ga0157369_10037007 3300013105 Bacteria 5346
55 Ga0157369_10313428 3300013105 Bacteria 1631
56 Ga0163162_10124615 3300013306 Bacteria 2682
57 Ga0157372_10003008 3300013307 Bacteria 18176
58 Ga0157372_10019195 3300013307 Bacteria 7361
59 Ga0157375_10181404 3300013308 Bacteria 2257
60 Ga0163163_10096421 3300014325 Bacteria 2977
61 Ga0157380_10050423 3300014326 Bacteria 3287
62 Ga0182008_10045844 3300014497 Bacteria 2174
63 Ga0157377_10011959 3300014745 Bacteria 4350
64 Ga0206353_11111965 3300020082 Bacteria 2947
65 Ga0207697_10015206 3300025315 Bacteria 3183
66 Ga0207647_10022989 3300025904 Bacteria 4134
67 Ga0207643_10002316 3300025908 Bacteria 10355
68 Ga0207707_10215106 3300025912 Bacteria 1673
69 Ga0207652_10012383 3300025921 Bacteria 6891
70 Ga0207694_10200297 3300025924 Bacteria 1624
71 Ga0207659_10043519 3300025926 Bacteria 3154
72 Ga0207687_10021204 3300025927 Bacteria 4315
73 Ga0207687_10031728 3300025927 Bacteria 3573
74 Ga0207690_10095500 3300025932 Bacteria 2112
75 Ga0207709_10050565 3300025935 Bacteria 2543
76 Ga0207691_10000686 3300025940 Bacteria 33446
77 Ga0207661_10002542 3300025944 Bacteria 12561
78 Ga0207661_10131591 3300025944 Bacteria 2143
79 Ga0207679_10005082 3300025945 Bacteria 8226
80 Ga0207679_10120040 3300025945 Bacteria 2091
81 Ga0207712_10022495 3300025961 Bacteria 4152
82 Ga0207712_10063970 3300025961 Bacteria 2621
83 Ga0207712_10162722 3300025961 Bacteria 1736
84 Ga0207678_10047120 3300026067 Bacteria 3728
85 Ga0207708_10000075 3300026075 Bacteria 78540
86 Ga0207702_10212747 3300026078 Bacteria 1798
87 Ga0207648_10002202 3300026089 Bacteria 21158
88 Ga0207676_10381897 3300026095 Bacteria 1311
89 Ga0207674_10039524 3300026116 Bacteria 4890
90 Ga0207675_100000335 3300026118 Bacteria 45018
91 Ga0207675_100061700 3300026118 Bacteria 3499
92 Ga0207698_10068274 3300026142 Bacteria 2806
93 Ga0268266_10000509 3300028379 Bacteria 54900
94 Ga0307513_10197596 3300031456 Bacteria 1856
95 Ga0307408_100046810 3300031548 Bacteria 3095
96 Ga0307405_10074301 3300031731 Bacteria 2198
97 Ga0307413_10185548 3300031824 Bacteria 1488
98 Ga0307410_10005910 3300031852 Bacteria 6541
99 Ga0307412_10193477 3300031911 Bacteria 1539
100 Ga0307409_100012126 3300031995 Bacteria 5476
101 Ga0307409_100221111 3300031995 Bacteria 1710
102 Ga0307409_100254902 3300031995 Bacteria 1606
103 Ga0307416_100009724 3300032002 Bacteria 6315
104 Ga0307416_100226931 3300032002 Bacteria 1797
105 Ga0307411_10116350 3300032005 Bacteria 1925
106 Ga0307415_100000142 3300032126 Bacteria 31723
107 Ga0307415_100021114 3300032126 Bacteria 3994
108 Ga0395900_0074781 3300037418 Bacteria 3483
109 Ga0395898_0161675 3300037466 Bacteria 2142
110 Ga0436364_0205223 3300037853 Bacteria 2069
111 Ga0395901_0021578 3300038443 Bacteria 6598
112 Ga0395901_0029208 3300038443 Bacteria 5674
113 Ga0395901_0041387 3300038443 Bacteria 4775
114 Ga0439446_0017762 3300042156 Bacteria 1988
115 Ga0466969_0016917 3300044656 Bacteria 3812
116 Ga0466972_0060952 3300044658 Bacteria 1810
117 Ga0466965_0021583 3300044683 Bacteria 3101
118 Ga0466966_0038094 3300044684 Bacteria 3098
119 Ga0466961_0023901 3300044693 Bacteria 3932
120 Ga0466961_0104793 3300044693 Bacteria 1781
121 Ga0466961_0132540 3300044693 Bacteria 1562
122 Ga0466963_0025204 3300044694 Bacteria 3791
123 Ga0466963_0031937 3300044694 Bacteria 3406
124 Ga0466963_0188693 3300044694 Bacteria 1440
125 Ga0466964_0002946 3300044706 Bacteria 6149
126 Ga0466964_0060176 3300044706 Bacteria 1579
127 Ga0466971_0055731 3300044719 Bacteria 1782
128 Ga0466970_0061055 3300044765 Bacteria 2019
129 Ga0466970_0111770 3300044765 Bacteria 1492
130 Ga0466957_0028604 3300044842 Bacteria 3319
131 Ga0466960_0000342 3300044901 Bacteria 15916
132 Ga0466960_0011910 3300044901 Bacteria 3658
133 Ga0466960_0016034 3300044901 Bacteria 3242
134 Ga0466960_0054332 3300044901 Bacteria 1944
135 Ga0466960_0109745 3300044901 Bacteria 1432
136 Ga0466959_0089208 3300045049 Bacteria 2215
137 Ga0451576_0216222 3300045051 Bacteria 2001
138 Ga0466958_0035247 3300045836 Bacteria 2989
139 Ga0466967_0062756 3300045976 Bacteria 3299
140 Ga0466967_0221135 3300045976 Bacteria 1799
141 Ga0495641_0060088 3300046461 Bacteria 1718
142 Ga0495664_0030911 3300046477 Bacteria 3138
143 Ga0496100_0197654 3300048903 Bacteria 1463
144 Ga0496101_0027725 3300048904 Bacteria 3949
145 Ga0496101_0042046 3300048904 Bacteria 3262
146 Ga0496101_0074337 3300048904 Bacteria 2499
147 Ga0496102_0002966 3300048905 Bacteria 14371
148 Ga0496102_0014325 3300048905 Bacteria 6888
149 Ga0496102_0036061 3300048905 Bacteria 4454
150 Ga0496103_0013890 3300048906 Bacteria 4781
151 Ga0496104_0008114 3300048907 Bacteria 9317
152 Ga0496104_0110517 3300048907 Bacteria 2635
153 Ga0496104_0131272 3300048907 Bacteria 2406
154 Ga0496105_0003226 3300048908 Bacteria 12017
155 Ga0496105_0113064 3300048908 Bacteria 2241
156 Ga0496105_0324012 3300048908 Bacteria 1234
157 Ga0496105_0326396 3300048908 Bacteria 1229
158 Ga0496106_0021568 3300048909 Bacteria 4783
159 Ga0496106_0170580 3300048909 Bacteria 1724
160 Ga0496107_0037428 3300048910 Bacteria 3481
161 Ga0496107_0050904 3300048910 Bacteria 2986
162 Ga0496108_0001910 3300048911 Bacteria 16663
163 Ga0496108_0061087 3300048911 Bacteria 3171
164 Ga0496108_0157812 3300048911 Bacteria 1959
165 Ga0496109_0118014 3300048912 Bacteria 2470
166 Ga0496109_0167215 3300048912 Bacteria 2062
167 Ga0496110_0000438 3300048913 Bacteria 28365
168 Ga0496110_0009496 3300048913 Bacteria 7873
169 Ga0496110_0080261 3300048913 Bacteria 2906
170 Ga0496110_0091641 3300048913 Bacteria 2719
171 Ga0496110_0123033 3300048913 Bacteria 2339
172 Ga0496110_0240534 3300048913 Bacteria 1647
173 Ga0496111_0000246 3300048914 Bacteria 26045
174 Ga0496111_0046462 3300048914 Bacteria 3126
175 Ga0496113_0026929 3300048916 Bacteria 4115
176 Ga0496114_0021472 3300048917 Bacteria 5253
177 Ga0496114_0040835 3300048917 Bacteria 3842
178 Ga0496114_0080523 3300048917 Bacteria 2751
179 Ga0496114_0153701 3300048917 Bacteria 1997
180 Ga0496114_0279928 3300048917 Bacteria 1471
181 Ga0496115_0001052 3300048918 Bacteria 20018
182 Ga0496115_0019866 3300048918 Bacteria 5176
183 Ga0496123_0008345 3300048926 Bacteria 9531
184 Ga0501031_0001153 3300049568 Bacteria 16102
185 Ga0501031_0014723 3300049568 Bacteria 5083
186 Ga0501032_0174780 3300049569 Bacteria 1407
187 Ga0501034_0119795 3300049571 Bacteria 2618
188 Ga0501034_0204969 3300049571 Bacteria 1929
189 Ga0501036_0009301 3300049572 Bacteria 8081
190 Ga0501037_0116706 3300049573 Bacteria 1921
191 Ga0501037_0124546 3300049573 Bacteria 1851
192 Ga0501038_0068008 3300049574 Bacteria 3029
193 Ga0501038_0173547 3300049574 Bacteria 1743
194 Ga0501038_0272583 3300049574 Bacteria 1334
195 Ga0501039_0067553 3300049575 Bacteria 2776
196 Ga0501039_0257387 3300049575 Bacteria 1372
197 Ga0501040_0023502 3300049576 Bacteria 4134
198 Ga0501040_0065375 3300049576 Bacteria 2505
199 Ga0501040_0100088 3300049576 Bacteria 2020
200 Ga0501040_0191806 3300049576 Bacteria 1450
201 Ga0501041_0001536 3300049577 Bacteria 12836
202 Ga0501041_0014137 3300049577 Bacteria 4736
203 Ga0501041_0126537 3300049577 Bacteria 1591
204 Ga0501042_0023523 3300049578 Bacteria 4312
205 Ga0501042_0159835 3300049578 Bacteria 1625
206 Ga0501048_0011038 3300049582 Bacteria 6738
207 Ga0501067_0001983 3300049583 Bacteria 11265
208 Ga0501067_0064400 3300049583 Bacteria 2029
209 Ga0501068_0040975 3300049584 Bacteria 2782
210 Ga0501068_0122802 3300049584 Bacteria 1620
211 Ga0501069_0017123 3300049585 Bacteria 3897
212 Ga0501069_0022148 3300049585 Bacteria 3454
213 Ga0501069_0051947 3300049585 Bacteria 2282
214 Ga0501069_0109004 3300049585 Bacteria 1576
215 Ga0501069_0161297 3300049585 Bacteria 1291
216 Ga0501070_0002920 3300049586 Bacteria 14867
217 Ga0501070_0047930 3300049586 Bacteria 3550
218 Ga0501070_0115141 3300049586 Bacteria 2221
219 Ga0501071_0022978 3300049587 Bacteria 4351
220 Ga0501071_0056535 3300049587 Bacteria 2834
221 Ga0501071_0059164 3300049587 Bacteria 2772
222 Ga0501071_0085140 3300049587 Bacteria 2318
223 Ga0501072_0012064 3300049588 Bacteria 6603
224 Ga0501072_0013891 3300049588 Bacteria 6171
225 Ga0501072_0051334 3300049588 Bacteria 3247
226 Ga0501073_0110506 3300049589 Bacteria 1907
227 Ga0501074_0007548 3300049590 Bacteria 7868
228 Ga0501074_0023381 3300049590 Bacteria 4494
229 Ga0501074_0180472 3300049590 Bacteria 1506
230 Ga0501075_0020200 3300049591 Bacteria 4840
231 Ga0501076_0006464 3300049592 Bacteria 8506
232 Ga0501076_0025265 3300049592 Bacteria 4596
233 Ga0501077_0023193 3300049593 Bacteria 3935
234 Ga0501077_0098979 3300049593 Bacteria 1848
235 Ga0501080_0006189 3300049742 Bacteria 10739
236 Ga0501080_0030764 3300049742 Bacteria 5002
237 Ga0501080_0072924 3300049742 Bacteria 3194
238 Ga0501081_0030074 3300049743 Bacteria 3674
239 Ga0501083_0139722 3300049744 Bacteria 1586
240 Ga0501035_0303450 3300049822 Bacteria 1345
241 Ga0501044_0251586 3300049823 Bacteria 1708
242 Ga0501045_0036732 3300049824 Bacteria 3558
243 Ga0501045_0208834 3300049824 Bacteria 1454
244 Ga0501045_0228699 3300049824 Bacteria 1384
245 nmdc:mga00v17_269_c2 3300050491 Bacteria 9419
246 nmdc:mga00v17_7029_c1 3300050491 Bacteria 5993
247 nmdc:mga0yw44_19453_c1 3300050492 Bacteria 3746
248 nmdc:mga0yw44_216956_c1 3300050492 Bacteria 1267
249 nmdc:mga06z11_9661_c1 3300050494 Bacteria 4074
250 nmdc:mga07m45_2191_c1 3300050496 Bacteria 9119
251 nmdc:mga07m45_6891_c1 3300050496 Bacteria 5780
252 Ga0495601_0031403 3300053077 Bacteria 3301
253 Ga0500641_0006813 3300053096 Bacteria 4064
254 Ga0500556_0001652 3300053104 Bacteria 8651
255 Ga0500593_000066 3300053117 Bacteria 38736
256 Ga0501084_0003006 3300054114 Bacteria 13661
257 Ga0501084_0065469 3300054114 Bacteria 3041
258 Ga0501084_0072555 3300054114 Bacteria 2883
259 Ga0501084_0215629 3300054114 Bacteria 1619
260 Ga0501084_0262923 3300054114 Bacteria 1457
261 Ga0501082_0081719 3300060353 Bacteria 2788
262 Ga0501082_0270284 3300060353 Bacteria 1479
263 Ga0466962_0062044 3300061719 Bacteria 1784
264 Ga0530510_0034596 3300061734 Bacteria 3640
265 Ga0530510_0121439 3300061734 Bacteria 1918
266 Ga0530510_0200385 3300061734 Bacteria 1482
267 2644093142 2643221615 Bacteria 5487866
268 2644229651 2643221641 Bacteria 4490190
269 2644322753 2643221657 Bacteria 5490246
270 2740168320 2739367898 Bacteria 4367674
271 2816421451 2816332119 Bacteria 8120218
272 2857485646 2857481737 Bacteria 4761446
273 8054614277 8054609563 Bacteria 5170090
274 Ga0501036_0247303
275 JGI24738J21930_10001704
276 Ga0070683_100048186
277 Ga0070683_100080499
278 Ga0070682_100009272
279 Ga0070660_100035711
280 Ga0070692_10103720
281 Ga0070675_100075905
282 Ga0070673_100174168
283 Ga0070688_100106904
284 Ga0070659_100026332
285 Ga0070701_10001001
286 Ga0070700_100002019
287 Ga0070663_100055772
288 Ga0068867_100040711
289 Ga0070685_10013162
290 Ga0070679_100003669
291 Ga0070684_100014767
292 Ga0070684_100170505
293 Ga0070684_100182739
294 Ga0070684_100206985
295 Ga0070686_100044938
296 Ga0070665_100024887
297 Ga0070665_100070211
298 Ga0070664_100005522
299 Ga0070664_100100158
300 Ga0068857_100034599
301 Ga0068857_100110367
302 Ga0070702_100006901
303 Ga0068852_100016291
304 Ga0068864_100041849
305 Ga0068861_100014298
306 Ga0068861_100104520
307 Ga0068870_10000683
308 Ga0068858_100021960
309 Ga0081538_10000308
310 Ga0075365_10020250
311 Ga0075365_10094245
312 Ga0075363_100007514
313 Ga0075364_10003739
314 Ga0075364_10029363
315 Ga0075367_10007895
316 Ga0075370_10002608
317 Ga0068865_100011282
318 Ga0105245_10038160
319 Ga0114129_10059118
320 Ga0105243_10003971
321 Ga0105242_10055863
322 Ga0105238_10121124
323 Ga0105249_10036311
324 Ga0105249_10072831
325 Ga0105249_10202286
326 Ga0105246_10083196
327 Ga0157369_10037007
328 Ga0157369_10313428
329 Ga0163162_10124615
330 Ga0157372_10003008
331 Ga0157372_10019195
332 Ga0157375_10181404
333 Ga0163163_10096421
334 Ga0157380_10050423
335 Ga0182008_10045844
336 Ga0157377_10011959
337 Ga0206353_11111965
338 Ga0207697_10015206
339 Ga0207647_10022989
340 Ga0207643_10002316
341 Ga0207707_10215106
342 Ga0207652_10012383
343 Ga0207694_10200297
344 Ga0207659_10043519
345 Ga0207687_10021204
346 Ga0207687_10031728
347 Ga0207690_10095500
348 Ga0207709_10050565
349 Ga0207691_10000686
350 Ga0207661_10002542
351 Ga0207661_10131591
352 Ga0207679_10005082
353 Ga0207679_10120040
354 Ga0207712_10022495
355 Ga0207712_10063970
356 Ga0207712_10162722
357 Ga0207678_10047120
358 Ga0207708_10000075
359 Ga0207702_10212747
360 Ga0207648_10002202
361 Ga0207676_10381897
362 Ga0207674_10039524
363 Ga0207675_100000335
364 Ga0207675_100061700
365 Ga0207698_10068274
366 Ga0268266_10000509
367 Ga0307513_10197596
368 Ga0307408_100046810
369 Ga0307405_10074301
370 Ga0307413_10185548
371 Ga0307410_10005910
372 Ga0307412_10193477
373 Ga0307409_100012126
374 Ga0307409_100221111
375 Ga0307409_100254902
376 Ga0307416_100009724
377 Ga0307416_100226931
378 Ga0307411_10116350
379 Ga0307415_100000142
380 Ga0307415_100021114
381 Ga0395900_0074781
382 Ga0395898_0161675
383 Ga0436364_0205223
384 Ga0395901_0021578
385 Ga0395901_0029208
386 Ga0395901_0041387
387 Ga0439446_0017762
388 Ga0466969_0016917
389 Ga0466972_0060952
390 Ga0466965_0021583
391 Ga0466966_0038094
392 Ga0466961_0023901
393 Ga0466961_0104793
394 Ga0466961_0132540
395 Ga0466963_0025204
396 Ga0466963_0031937
397 Ga0466963_0188693
398 Ga0466964_0002946
399 Ga0466964_0060176
400 Ga0466971_0055731
401 Ga0466970_0061055
402 Ga0466970_0111770
403 Ga0466957_0028604
404 Ga0466960_0000342
405 Ga0466960_0011910
406 Ga0466960_0016034
407 Ga0466960_0054332
408 Ga0466960_0109745
409 Ga0466959_0089208
410 Ga0451576_0216222
411 Ga0466958_0035247
412 Ga0466967_0062756
413 Ga0466967_0221135
414 Ga0495641_0060088
415 Ga0495664_0030911
416 Ga0496100_0197654
417 Ga0496101_0027725
418 Ga0496101_0042046
419 Ga0496101_0074337
420 Ga0496102_0002966
421 Ga0496102_0014325
422 Ga0496102_0036061
423 Ga0496103_0013890
424 Ga0496104_0008114
425 Ga0496104_0110517
426 Ga0496104_0131272
427 Ga0496105_0003226
428 Ga0496105_0113064
429 Ga0496105_0324012
430 Ga0496105_0326396
431 Ga0496106_0021568
432 Ga0496106_0170580
433 Ga0496107_0037428
434 Ga0496107_0050904
435 Ga0496108_0001910
436 Ga0496108_0061087
437 Ga0496108_0157812
438 Ga0496109_0118014
439 Ga0496109_0167215
440 Ga0496110_0000438
441 Ga0496110_0009496
442 Ga0496110_0080261
443 Ga0496110_0091641
444 Ga0496110_0123033
445 Ga0496110_0240534
446 Ga0496111_0000246
447 Ga0496111_0046462
448 Ga0496113_0026929
449 Ga0496114_0021472
450 Ga0496114_0040835
451 Ga0496114_0080523
452 Ga0496114_0153701
453 Ga0496114_0279928
454 Ga0496115_0001052
455 Ga0496115_0019866
456 Ga0496123_0008345
457 Ga0501031_0001153
458 Ga0501031_0014723
459 Ga0501032_0174780
460 Ga0501034_0119795
461 Ga0501034_0204969
462 Ga0501036_0009301
463 Ga0501037_0116706
464 Ga0501037_0124546
465 Ga0501038_0068008
466 Ga0501038_0173547
467 Ga0501038_0272583
468 Ga0501039_0067553
469 Ga0501039_0257387
470 Ga0501040_0023502
471 Ga0501040_0065375
472 Ga0501040_0100088
473 Ga0501040_0191806
474 Ga0501041_0001536
475 Ga0501041_0014137
476 Ga0501041_0126537
477 Ga0501042_0023523
478 Ga0501042_0159835
479 Ga0501048_0011038
480 Ga0501067_0001983
481 Ga0501067_0064400
482 Ga0501068_0040975
483 Ga0501068_0122802
484 Ga0501069_0017123
485 Ga0501069_0022148
486 Ga0501069_0051947
487 Ga0501069_0109004
488 Ga0501069_0161297
489 Ga0501070_0002920
490 Ga0501070_0047930
491 Ga0501070_0115141
492 Ga0501071_0022978
493 Ga0501071_0056535
494 Ga0501071_0059164
495 Ga0501071_0085140
496 Ga0501072_0012064
497 Ga0501072_0013891
498 Ga0501072_0051334
499 Ga0501073_0110506
500 Ga0501074_0007548
501 Ga0501074_0023381
502 Ga0501074_0180472
503 Ga0501075_0020200
504 Ga0501076_0006464
505 Ga0501076_0025265
506 Ga0501077_0023193
507 Ga0501077_0098979
508 Ga0501080_0006189
509 Ga0501080_0030764
510 Ga0501080_0072924
511 Ga0501081_0030074
512 Ga0501083_0139722
513 Ga0501035_0303450
514 Ga0501044_0251586
515 Ga0501045_0036732
516 Ga0501045_0208834
517 Ga0501045_0228699
518 nmdc:mga00v17_269_c2
519 nmdc:mga00v17_7029_c1
520 nmdc:mga0yw44_19453_c1
521 nmdc:mga0yw44_216956_c1
522 nmdc:mga06z11_9661_c1
523 nmdc:mga07m45_2191_c1
524 nmdc:mga07m45_6891_c1
525 Ga0495601_0031403
526 Ga0500641_0006813
527 Ga0500556_0001652
528 Ga0500593_000066
529 Ga0501084_0003006
530 Ga0501084_0065469
531 Ga0501084_0072555
532 Ga0501084_0215629
533 Ga0501084_0262923
534 Ga0501082_0081719
535 Ga0501082_0270284
536 Ga0466962_0062044
537 Ga0530510_0034596
538 Ga0530510_0121439
539 Ga0530510_0200385
540 2644093142
541 2644229651
542 2644322753
543 2740168320
544 2816421451
545 2857485646
546 8054614277

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00850

Hist_deacetyl

Histone deacetylase domain

25

312

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3mz7-assembly1.cif.gz_A crystal structure of d101l co2+ hdac8 complexed with m344 0.9053 5 384
3rqd-assembly3.cif.gz_B ideal thiolate-zinc coordination geometry in depsipeptide binding to histone deacetylase 8 0.905 4 384
3f07-assembly3.cif.gz_C crystal structure analysis of human hdac8 complexed with apha in a new monoclinic crystal form 0.9048 4 384
5d1d-assembly2.cif.gz_B crystal structure of p91l-y306f hdac8 in complex with a tetrapeptide substrate 0.9043 5 384
2v5x-assembly2.cif.gz_B crystal structure of hdac8-inhibitor complex 0.9042 5 384
ID Description Score Start End Superfamily
af_Q2G292_6_379_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9121 5 384 3.40.800.20
af_Q2G292_6_379_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.905 5 384 3.40.800.20
5ji5A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9012 6 322 3.40.800.20
5ji5A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.8928 6 322 3.40.800.20
af_A4I0X6_83_423_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.886 5 326 3.40.800.20
ID Description Score Start End GO Terms
AF-A0A6B3E8L2-F1-model_v4 Acetoin utilization protein AcuC 0.9871 240 351
AF-S4NE37-F1-model_v4 Acetoin utilization protein AcuC 0.9829 10 391 GO:0004407
GO:0040029
GO:0045150
AF-D9XZ29-F1-model_v4 Acetoin utilization protein AcuC 0.9827 9 391 GO:0004407
GO:0040029
GO:0045150
AF-A0A6B3ESI5-F1-model_v4 Acetoin utilization protein AcuC 0.9823 26 195 GO:0004407
GO:0040029
AF-A0A510TCT8-F1-model_v4 Acetoin utilization protein AcuC 0.9798 2 390 GO:0004407
GO:0040029
GO:0045150

Map