F378980

General Info

Members Datasets Scaffolds Average Seq Length
273 148 546 386

Family's Representative Sequence

Representative Sequence 3300007788|Ga0099795_10026512|Ga0099795_100265121
Length 427
Sequence MEFYGNPIKFTNTNHQYYQFAKSTADLEHGSIGDNLMSDRVYIFDTTLRDGEQSPGCSMTVPEKLRMARKLVELGVDTLEAGFPIASEGEYEAVTAVSKEFPSAQVAALARCCTLDAERAAAALSHARRPRIHLVIATSEIHLKHKLKKTQQQVLDEAVAAVELARRHVDDVEFSAEDGARTEPEFLEKVSKAVVAAGARTVNIADTVGYATPKEYGALIGRIVRALGDRAIVSAHCHDDRGLAVANSLAACEAGARQIECTINGIGERAGNCSLEEIVMILKTRPDSYGYHTGVHTEHLYSASQLLSSIITFGPQPNKAIVGRNAFAHEAGIHQDGYLKEKTTYEIIDPRSVGVPEGKLVLGKHSGRHALGQRAKELGYDLTREELNDLYKRFTDVADHRKKGLMDEEIVSLIQTSREEALKVAAD

Samples

Sample ID Description Type Environment
1 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
2 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
30 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
75 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
76 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
77 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
78 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
81 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
86 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
87 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
88 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
89 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
90 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
93 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
98 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
99 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
100 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
101 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
106 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
107 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
108 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
118 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
122 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
123 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
124 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
125 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
126 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
135 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
136 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
142 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
145 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
146 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
147 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.83
Rhizosphere 87.55
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099795_10026512 3300007788 Bacteria 1952
2 Ga0032354_1021672 3300003693 Bacteria 2629
3 Ga0070658_10150855 3300005327 Bacteria 1946
4 Ga0070683_100000025 3300005329 Bacteria 173339
5 Ga0070680_100151021 3300005336 Bacteria 1950
6 Ga0070689_100000004 3300005340 Bacteria 497771
7 Ga0070671_100070160 3300005355 Bacteria 2923
8 Ga0070659_100044919 3300005366 Bacteria 3461
9 Ga0070714_100098901 3300005435 Bacteria 2567
10 Ga0070713_100003976 3300005436 Bacteria 9834
11 Ga0070713_100009319 3300005436 Bacteria 7019
12 Ga0070663_100048190 3300005455 Bacteria 3020
13 Ga0070681_10007274 3300005458 Bacteria 10808
14 Ga0070681_10415941 3300005458 Bacteria 1256
15 Ga0070679_100002409 3300005530 Bacteria 16959
16 Ga0070684_100002424 3300005535 Bacteria 13757
17 Ga0068853_100007291 3300005539 Bacteria 8851
18 Ga0068853_100017292 3300005539 Bacteria 5953
19 Ga0070665_100073300 3300005548 Bacteria 3430
20 Ga0068855_100025233 3300005563 Bacteria 7116
21 Ga0068855_100044073 3300005563 Bacteria 5281
22 Ga0068855_100153842 3300005563 Bacteria 2614
23 Ga0070664_100202618 3300005564 Bacteria 1771
24 Ga0068857_100078849 3300005577 Bacteria 2940
25 Ga0068856_100037015 3300005614 Bacteria 4786
26 Ga0068856_100042717 3300005614 Bacteria 4460
27 Ga0068856_100257861 3300005614 Bacteria 1759
28 Ga0068852_100119497 3300005616 Bacteria 2410
29 Ga0068863_100027467 3300005841 Bacteria 5428
30 Ga0068860_100113075 3300005843 Bacteria 2596
31 Ga0070717_10020546 3300006028 Bacteria 5196
32 Ga0070717_10026891 3300006028 Bacteria 4595
33 Ga0068871_100090371 3300006358 Bacteria 2550
34 Ga0075430_100018234 3300006846 Bacteria 5974
35 Ga0105240_10000900 3300009093 Bacteria 53037
36 Ga0105240_10001542 3300009093 Bacteria 39129
37 Ga0105240_10031355 3300009093 Bacteria 6895
38 Ga0105240_10204678 3300009093 Bacteria 2311
39 Ga0105240_10342505 3300009093 Bacteria 1698
40 Ga0114129_10248003 3300009147 Bacteria 2391
41 Ga0105248_10090051 3300009177 Bacteria 3454
42 Ga0105248_10109474 3300009177 Bacteria 3115
43 Ga0105248_10552826 3300009177 Bacteria 1299
44 Ga0105237_10000019 3300009545 Bacteria 234829
45 Ga0105237_10002953 3300009545 Bacteria 20583
46 Ga0105237_10014193 3300009545 Bacteria 8342
47 Ga0105238_10005505 3300009551 Bacteria 12505
48 Ga0105238_10007869 3300009551 Bacteria 10663
49 Ga0105238_10057738 3300009551 Bacteria 3891
50 Ga0105239_10040886 3300010375 Bacteria 5081
51 Ga0157373_10082727 3300013100 Bacteria 2262
52 Ga0157370_10016688 3300013104 Bacteria 7432
53 Ga0157370_10168889 3300013104 Bacteria 2034
54 Ga0157369_10011518 3300013105 Bacteria 10045
55 Ga0157369_10030931 3300013105 Bacteria 5900
56 Ga0157369_10055091 3300013105 Bacteria 4293
57 Ga0157369_10296943 3300013105 Bacteria 1681
58 Ga0157374_10011350 3300013296 Bacteria 7709
59 Ga0157372_10071835 3300013307 Bacteria 3899
60 Ga0157372_10168552 3300013307 Bacteria 2533
61 Ga0157375_10076579 3300013308 Bacteria 3373
62 Ga0157377_10141073 3300014745 Bacteria 1481
63 Ga0213872_10000206 3300021361 Bacteria 52479
64 Ga0213876_10005092 3300021384 Bacteria 7248
65 Ga0213876_10042152 3300021384 Unclassified 2412
66 Ga0213876_10080458 3300021384 Bacteria 1723
67 Ga0213875_10000044 3300021388 Bacteria 151004
68 Ga0213875_10001845 3300021388 Bacteria 13168
69 Ga0213875_10008712 3300021388 Bacteria 5177
70 Ga0213875_10027123 3300021388 Bacteria 2725
71 Ga0213875_10109564 3300021388 Bacteria 1289
72 Ga0213871_10000392 3300021441 Bacteria 5787
73 Ga0207705_10026397 3300025909 Bacteria 4142
74 Ga0207705_10056999 3300025909 Bacteria 2818
75 Ga0207707_10005775 3300025912 Bacteria 10818
76 Ga0207707_10145152 3300025912 Bacteria 2074
77 Ga0207707_10172498 3300025912 Bacteria 1890
78 Ga0207695_10001327 3300025913 Bacteria 41986
79 Ga0207695_10010422 3300025913 Bacteria 11371
80 Ga0207695_10022170 3300025913 Bacteria 7222
81 Ga0207695_10029893 3300025913 Bacteria 6010
82 Ga0207695_10295025 3300025913 Bacteria 1513
83 Ga0207671_10000308 3300025914 Bacteria 72156
84 Ga0207671_10011369 3300025914 Bacteria 7251
85 Ga0207671_10078402 3300025914 Bacteria 2474
86 Ga0207663_10029691 3300025916 Bacteria 3215
87 Ga0207660_10113759 3300025917 Bacteria 2040
88 Ga0207657_10046463 3300025919 Bacteria 3802
89 Ga0207652_10031759 3300025921 Bacteria 4435
90 Ga0207694_10011932 3300025924 Bacteria 6552
91 Ga0207687_10116953 3300025927 Bacteria 1988
92 Ga0207700_10016932 3300025928 Bacteria 4854
93 Ga0207700_10238256 3300025928 Bacteria 1550
94 Ga0207664_10013908 3300025929 Bacteria 5799
95 Ga0207664_10240732 3300025929 Bacteria 1576
96 Ga0207690_10053807 3300025932 Bacteria 2703
97 Ga0207690_10113342 3300025932 Bacteria 1957
98 Ga0207670_10000022 3300025936 Bacteria 145904
99 Ga0207711_10115097 3300025941 Bacteria 2396
100 Ga0207661_10000028 3300025944 Bacteria 173347
101 Ga0207667_10034374 3300025949 Bacteria 5444
102 Ga0207667_10057685 3300025949 Bacteria 4075
103 Ga0207667_10094315 3300025949 Bacteria 3090
104 Ga0207667_10159754 3300025949 Bacteria 2318
105 Ga0207651_10044972 3300025960 Bacteria 2959
106 Ga0207712_10082021 3300025961 Bacteria 2350
107 Ga0207639_10014974 3300026041 Bacteria 5464
108 Ga0207639_10048742 3300026041 Bacteria 3208
109 Ga0207702_10020315 3300026078 Bacteria 5501
110 Ga0207702_10025877 3300026078 Bacteria 4871
111 Ga0207702_10029390 3300026078 Bacteria 4572
112 Ga0207641_10075007 3300026088 Bacteria 2920
113 Ga0207676_10113268 3300026095 Bacteria 2274
114 Ga0207674_10141021 3300026116 Bacteria 2369
115 Ga0207683_10256155 3300026121 Bacteria 1597
116 Ga0268264_10225863 3300028381 Bacteria 1726
117 Ga0265334_10022521 3300028573 Bacteria 2566
118 Ga0265334_10048169 3300028573 Bacteria 1642
119 Ga0265318_10000191 3300028577 Bacteria 54256
120 Ga0265318_10000255 3300028577 Bacteria 46320
121 Ga0265323_10001356 3300028653 Bacteria 12106
122 Ga0265338_10073853 3300028800 Bacteria 2904
123 Ga0265330_10000021 3300031235 Bacteria 154495
124 Ga0265330_10002296 3300031235 Bacteria 10503
125 Ga0265332_10000733 3300031238 Bacteria 20429
126 Ga0265332_10004286 3300031238 Bacteria 6732
127 Ga0265328_10008474 3300031239 Bacteria 4236
128 Ga0265328_10016868 3300031239 Bacteria 2835
129 Ga0265320_10000178 3300031240 Bacteria 53806
130 Ga0265320_10000649 3300031240 Bacteria 26564
131 Ga0265320_10004056 3300031240 Bacteria 9625
132 Ga0265325_10077005 3300031241 Bacteria 1664
133 Ga0265329_10005052 3300031242 Bacteria 5385
134 Ga0265329_10009156 3300031242 Bacteria 3710
135 Ga0265339_10014184 3300031249 Bacteria 4809
136 Ga0265339_10068601 3300031249 Bacteria 1894
137 Ga0265331_10000077 3300031250 Bacteria 145529
138 Ga0265331_10000558 3300031250 Bacteria 33732
139 Ga0265316_10002994 3300031344 Bacteria 17273
140 Ga0265316_10007350 3300031344 Bacteria 10380
141 Ga0265316_10015611 3300031344 Bacteria 6630
142 Ga0265316_10045865 3300031344 Bacteria 3467
143 Ga0265316_10063835 3300031344 Bacteria 2854
144 Ga0265316_10064299 3300031344 Bacteria 2842
145 Ga0265316_10137044 3300031344 Bacteria 1841
146 Ga0265313_10000025 3300031595 Bacteria 136925
147 Ga0265313_10019525 3300031595 Bacteria 3766
148 Ga0265313_10069756 3300031595 Bacteria 1621
149 Ga0265314_10000092 3300031711 Bacteria 136898
150 Ga0265314_10003861 3300031711 Bacteria 14285
151 Ga0265314_10005038 3300031711 Bacteria 12038
152 Ga0265314_10011075 3300031711 Bacteria 7474
153 Ga0265342_10004693 3300031712 Bacteria 10641
154 Ga0265342_10020600 3300031712 Bacteria 4226
155 Ga0265342_10037983 3300031712 Bacteria 2934
156 Ga0265342_10052644 3300031712 Bacteria 2426
157 Ga0373926_0021117 3300035083 Bacteria 2253
158 Ga0373954_0006402 3300035118 Bacteria 5134
159 Ga0373956_0031572 3300035119 Bacteria 2322
160 Ga0373943_0030002 3300035170 Bacteria 2572
161 Ga0373946_0075281 3300035171 Bacteria 1467
162 Ga0373935_0011713 3300035692 Bacteria 5268
163 Ga0373935_0093576 3300035692 Bacteria 1971
164 Ga0373927_0001135 3300035695 Bacteria 20156
165 Ga0373927_0003397 3300035695 Bacteria 11451
166 Ga0373927_0004659 3300035695 Bacteria 9556
167 Ga0373947_0004041 3300035725 Bacteria 8627
168 Ga0373937_0014907 3300036401 Bacteria 6865
169 Ga0373937_0164976 3300036401 Bacteria 2077
170 Ga0373925_0000323 3300037068 Bacteria 50082
171 Ga0373925_0046967 3300037068 Bacteria 3212
172 Ga0436364_0073959 3300037853 Bacteria 8686
173 Ga0436364_0148896 3300037853 Bacteria 2155
174 Ga0436364_0157811 3300037853 Bacteria 430293
175 Ga0436364_0193037 3300037853 Bacteria 9726
176 Ga0436364_0426133 3300037853 Bacteria 9328
177 Ga0436364_0517172 3300037853 Bacteria 2889
178 Ga0436364_0532840 3300037853 Bacteria 3070
179 Ga0436364_0561365 3300037853 Bacteria 4144
180 Ga0436364_0745557 3300037853 Bacteria 199469
181 Ga0436364_0752019 3300037853 Bacteria 3228
182 Ga0436364_0891441 3300037853 Bacteria 6548
183 Ga0436364_0961923 3300037853 Bacteria 1414
184 Ga0436364_1085801 3300037853 Bacteria 9158
185 Ga0436364_1161212 3300037853 Bacteria 8372
186 Ga0436364_1228011 3300037853 Bacteria 3935
187 Ga0395901_0290256 3300038443 Bacteria 1698
188 Ga0436365_0291486 3300039437 Bacteria 3887
189 Ga0436365_0544129 3300039437 Bacteria 3396
190 Ga0436365_0695334 3300039437 Bacteria 5813
191 Ga0436365_1207887 3300039437 Bacteria 19641
192 Ga0436365_1284086 3300039437 Bacteria 3541
193 Ga0436365_1401564 3300039437 Bacteria 6347
194 Ga0436360_0203485 3300039438 Bacteria 42348
195 Ga0436361_0079738 3300039447 Bacteria 122121
196 Ga0436361_0562104 3300039447 Bacteria 1459
197 Ga0436362_0414667 3300039453 Bacteria 4796
198 Ga0451577_0008176 3300042876 Bacteria 10196
199 Ga0466963_0094272 3300044694 Bacteria 2042
200 Ga0453684_0387595 3300044712 Bacteria 1568
201 Ga0451576_0009967 3300045051 Bacteria 10959
202 Ga0451576_0032768 3300045051 Bacteria 5526
203 Ga0451576_0094403 3300045051 Bacteria 3111
204 Ga0451576_0298124 3300045051 Bacteria 1686
205 Ga0495592_0030123 3300046454 Bacteria 4104
206 Ga0495651_0013381 3300046462 Bacteria 6347
207 Ga0495651_0024578 3300046462 Bacteria 4686
208 Ga0495580_0000042 3300046472 Bacteria 70551
209 Ga0495580_0004289 3300046472 Bacteria 11989
210 Ga0495580_0007039 3300046472 Bacteria 9069
211 Ga0495580_0042570 3300046472 Bacteria 3235
212 Ga0495580_0056295 3300046472 Bacteria 2770
213 Ga0495580_0057860 3300046472 Bacteria 2728
214 Ga0495580_0181716 3300046472 Bacteria 1452
215 Ga0495662_0025330 3300046476 Bacteria 2864
216 Ga0495664_0027988 3300046477 Bacteria 3289
217 Ga0495594_0100047 3300046499 Bacteria 1631
218 Ga0495608_0074710 3300046511 Bacteria 2209
219 Ga0495608_0173605 3300046511 Bacteria 1366
220 Ga0495618_0040705 3300046514 Bacteria 2926
221 Ga0495628_0234422 3300046516 Bacteria 1375
222 Ga0495630_0134230 3300046517 Bacteria 1880
223 Ga0495652_0020162 3300046529 Bacteria 5926
224 Ga0495652_0067155 3300046529 Bacteria 3007
225 Ga0495665_0120806 3300046531 Bacteria 1372
226 Ga0495640_0076913 3300046533 Bacteria 2226
227 Ga0495645_0005340 3300046543 Bacteria 8804
228 Ga0495645_0010378 3300046543 Bacteria 6527
229 Ga0495667_0013358 3300046559 Bacteria 5558
230 Ga0495667_0055296 3300046559 Bacteria 2610
231 Ga0495634_0032208 3300046642 Bacteria 3606
232 Ga0495599_0005808 3300046678 Bacteria 7409
233 Ga0495599_0170290 3300046678 Bacteria 1344
234 Ga0495623_0034161 3300046679 Bacteria 3262
235 Ga0495613_0123209 3300046689 Bacteria 1860
236 Ga0495604_0068833 3300047317 Bacteria 2685
237 Ga0495604_0175036 3300047317 Bacteria 1505
238 Ga0495636_0076246 3300047318 Bacteria 1438
239 Ga0495674_0001641 3300047319 Bacteria 21990
240 Ga0495674_0008854 3300047319 Bacteria 9576
241 Ga0495674_0204452 3300047319 Bacteria 1637
242 Ga0495674_0257414 3300047319 Bacteria 1435
243 Ga0495680_0079856 3300047322 Bacteria 2473
244 Ga0495680_0083611 3300047322 Bacteria 2406
245 Ga0495675_0028833 3300047444 Bacteria 3538
246 Ga0495675_0089431 3300047444 Bacteria 1933
247 Ga0495684_0000267 3300047471 Bacteria 41592
248 Ga0495684_0091282 3300047471 Bacteria 2307
249 Ga0495684_0108210 3300047471 Bacteria 2099
250 Ga0495684_0154990 3300047471 Bacteria 1711
251 Ga0495602_0026005 3300048088 Bacteria 5654
252 Ga0495602_0296728 3300048088 Bacteria 1184
253 Ga0496109_0332660 3300048912 Bacteria 1434
254 Ga0496112_0041229 3300048915 Bacteria 4516
255 Ga0496114_0183698 3300048917 Bacteria 1827
256 Ga0496115_0019122 3300048918 Bacteria 5268
257 Ga0496115_0174058 3300048918 Bacteria 1780
258 Ga0501032_0098210 3300049569 Bacteria 1941
259 Ga0501038_0069394 3300049574 Bacteria 2994
260 Ga0501046_0038801 3300049580 Bacteria 3820
261 Ga0501047_0012230 3300049581 Bacteria 8128
262 Ga0501047_0049370 3300049581 Bacteria 4063
263 Ga0501070_0013978 3300049586 Bacteria 6759
264 Ga0501073_0062653 3300049589 Bacteria 2594
265 Ga0501074_0095318 3300049590 Bacteria 2131
266 Ga0501035_0025545 3300049822 Bacteria 5414
267 Ga0501044_0000814 3300049823 Bacteria 37495
268 Ga0501044_0017675 3300049823 Bacteria 7648
269 Ga0501044_0177993 3300049823 Bacteria 2095
270 nmdc:mga0qj67_46127_c1 3300050509 Bacteria 3440
271 nmdc:mga06r32_238549_c1 3300050510 Bacteria 1806
272 nmdc:mga08x19_6884_c1 3300050514 Bacteria 6750
273 Ga0501082_0005647 3300060353 Bacteria 10855
274 Ga0099795_10026512
275 Ga0032354_1021672
276 Ga0070658_10150855
277 Ga0070683_100000025
278 Ga0070680_100151021
279 Ga0070689_100000004
280 Ga0070671_100070160
281 Ga0070659_100044919
282 Ga0070714_100098901
283 Ga0070713_100003976
284 Ga0070713_100009319
285 Ga0070663_100048190
286 Ga0070681_10007274
287 Ga0070681_10415941
288 Ga0070679_100002409
289 Ga0070684_100002424
290 Ga0068853_100007291
291 Ga0068853_100017292
292 Ga0070665_100073300
293 Ga0068855_100025233
294 Ga0068855_100044073
295 Ga0068855_100153842
296 Ga0070664_100202618
297 Ga0068857_100078849
298 Ga0068856_100037015
299 Ga0068856_100042717
300 Ga0068856_100257861
301 Ga0068852_100119497
302 Ga0068863_100027467
303 Ga0068860_100113075
304 Ga0070717_10020546
305 Ga0070717_10026891
306 Ga0068871_100090371
307 Ga0075430_100018234
308 Ga0105240_10000900
309 Ga0105240_10001542
310 Ga0105240_10031355
311 Ga0105240_10204678
312 Ga0105240_10342505
313 Ga0114129_10248003
314 Ga0105248_10090051
315 Ga0105248_10109474
316 Ga0105248_10552826
317 Ga0105237_10000019
318 Ga0105237_10002953
319 Ga0105237_10014193
320 Ga0105238_10005505
321 Ga0105238_10007869
322 Ga0105238_10057738
323 Ga0105239_10040886
324 Ga0157373_10082727
325 Ga0157370_10016688
326 Ga0157370_10168889
327 Ga0157369_10011518
328 Ga0157369_10030931
329 Ga0157369_10055091
330 Ga0157369_10296943
331 Ga0157374_10011350
332 Ga0157372_10071835
333 Ga0157372_10168552
334 Ga0157375_10076579
335 Ga0157377_10141073
336 Ga0213872_10000206
337 Ga0213876_10005092
338 Ga0213876_10042152
339 Ga0213876_10080458
340 Ga0213875_10000044
341 Ga0213875_10001845
342 Ga0213875_10008712
343 Ga0213875_10027123
344 Ga0213875_10109564
345 Ga0213871_10000392
346 Ga0207705_10026397
347 Ga0207705_10056999
348 Ga0207707_10005775
349 Ga0207707_10145152
350 Ga0207707_10172498
351 Ga0207695_10001327
352 Ga0207695_10010422
353 Ga0207695_10022170
354 Ga0207695_10029893
355 Ga0207695_10295025
356 Ga0207671_10000308
357 Ga0207671_10011369
358 Ga0207671_10078402
359 Ga0207663_10029691
360 Ga0207660_10113759
361 Ga0207657_10046463
362 Ga0207652_10031759
363 Ga0207694_10011932
364 Ga0207687_10116953
365 Ga0207700_10016932
366 Ga0207700_10238256
367 Ga0207664_10013908
368 Ga0207664_10240732
369 Ga0207690_10053807
370 Ga0207690_10113342
371 Ga0207670_10000022
372 Ga0207711_10115097
373 Ga0207661_10000028
374 Ga0207667_10034374
375 Ga0207667_10057685
376 Ga0207667_10094315
377 Ga0207667_10159754
378 Ga0207651_10044972
379 Ga0207712_10082021
380 Ga0207639_10014974
381 Ga0207639_10048742
382 Ga0207702_10020315
383 Ga0207702_10025877
384 Ga0207702_10029390
385 Ga0207641_10075007
386 Ga0207676_10113268
387 Ga0207674_10141021
388 Ga0207683_10256155
389 Ga0268264_10225863
390 Ga0265334_10022521
391 Ga0265334_10048169
392 Ga0265318_10000191
393 Ga0265318_10000255
394 Ga0265323_10001356
395 Ga0265338_10073853
396 Ga0265330_10000021
397 Ga0265330_10002296
398 Ga0265332_10000733
399 Ga0265332_10004286
400 Ga0265328_10008474
401 Ga0265328_10016868
402 Ga0265320_10000178
403 Ga0265320_10000649
404 Ga0265320_10004056
405 Ga0265325_10077005
406 Ga0265329_10005052
407 Ga0265329_10009156
408 Ga0265339_10014184
409 Ga0265339_10068601
410 Ga0265331_10000077
411 Ga0265331_10000558
412 Ga0265316_10002994
413 Ga0265316_10007350
414 Ga0265316_10015611
415 Ga0265316_10045865
416 Ga0265316_10063835
417 Ga0265316_10064299
418 Ga0265316_10137044
419 Ga0265313_10000025
420 Ga0265313_10019525
421 Ga0265313_10069756
422 Ga0265314_10000092
423 Ga0265314_10003861
424 Ga0265314_10005038
425 Ga0265314_10011075
426 Ga0265342_10004693
427 Ga0265342_10020600
428 Ga0265342_10037983
429 Ga0265342_10052644
430 Ga0373926_0021117
431 Ga0373954_0006402
432 Ga0373956_0031572
433 Ga0373943_0030002
434 Ga0373946_0075281
435 Ga0373935_0011713
436 Ga0373935_0093576
437 Ga0373927_0001135
438 Ga0373927_0003397
439 Ga0373927_0004659
440 Ga0373947_0004041
441 Ga0373937_0014907
442 Ga0373937_0164976
443 Ga0373925_0000323
444 Ga0373925_0046967
445 Ga0436364_0073959
446 Ga0436364_0148896
447 Ga0436364_0157811
448 Ga0436364_0193037
449 Ga0436364_0426133
450 Ga0436364_0517172
451 Ga0436364_0532840
452 Ga0436364_0561365
453 Ga0436364_0745557
454 Ga0436364_0752019
455 Ga0436364_0891441
456 Ga0436364_0961923
457 Ga0436364_1085801
458 Ga0436364_1161212
459 Ga0436364_1228011
460 Ga0395901_0290256
461 Ga0436365_0291486
462 Ga0436365_0544129
463 Ga0436365_0695334
464 Ga0436365_1207887
465 Ga0436365_1284086
466 Ga0436365_1401564
467 Ga0436360_0203485
468 Ga0436361_0079738
469 Ga0436361_0562104
470 Ga0436362_0414667
471 Ga0451577_0008176
472 Ga0466963_0094272
473 Ga0453684_0387595
474 Ga0451576_0009967
475 Ga0451576_0032768
476 Ga0451576_0094403
477 Ga0451576_0298124
478 Ga0495592_0030123
479 Ga0495651_0013381
480 Ga0495651_0024578
481 Ga0495580_0000042
482 Ga0495580_0004289
483 Ga0495580_0007039
484 Ga0495580_0042570
485 Ga0495580_0056295
486 Ga0495580_0057860
487 Ga0495580_0181716
488 Ga0495662_0025330
489 Ga0495664_0027988
490 Ga0495594_0100047
491 Ga0495608_0074710
492 Ga0495608_0173605
493 Ga0495618_0040705
494 Ga0495628_0234422
495 Ga0495630_0134230
496 Ga0495652_0020162
497 Ga0495652_0067155
498 Ga0495665_0120806
499 Ga0495640_0076913
500 Ga0495645_0005340
501 Ga0495645_0010378
502 Ga0495667_0013358
503 Ga0495667_0055296
504 Ga0495634_0032208
505 Ga0495599_0005808
506 Ga0495599_0170290
507 Ga0495623_0034161
508 Ga0495613_0123209
509 Ga0495604_0068833
510 Ga0495604_0175036
511 Ga0495636_0076246
512 Ga0495674_0001641
513 Ga0495674_0008854
514 Ga0495674_0204452
515 Ga0495674_0257414
516 Ga0495680_0079856
517 Ga0495680_0083611
518 Ga0495675_0028833
519 Ga0495675_0089431
520 Ga0495684_0000267
521 Ga0495684_0091282
522 Ga0495684_0108210
523 Ga0495684_0154990
524 Ga0495602_0026005
525 Ga0495602_0296728
526 Ga0496109_0332660
527 Ga0496112_0041229
528 Ga0496114_0183698
529 Ga0496115_0019122
530 Ga0496115_0174058
531 Ga0501032_0098210
532 Ga0501038_0069394
533 Ga0501046_0038801
534 Ga0501047_0012230
535 Ga0501047_0049370
536 Ga0501070_0013978
537 Ga0501073_0062653
538 Ga0501074_0095318
539 Ga0501035_0025545
540 Ga0501044_0000814
541 Ga0501044_0017675
542 Ga0501044_0177993
543 nmdc:mga0qj67_46127_c1
544 nmdc:mga06r32_238549_c1
545 nmdc:mga08x19_6884_c1
546 Ga0501082_0005647

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00682

HMGL-like

HMGL-like

40

307

0.99

PF22617

HCS_D2

Homocitrate synthase post-HMGL domain-like

321

402

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ewb-assembly1.cif.gz_X-2 crystal structure of n-terminal domain of putative 2-isopropylmalate synthase from listeria monocytogenes 0.9442 19 267
3eeg-assembly1.cif.gz_B crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.9291 19 271
3eeg-assembly1.cif.gz_A crystal structure of a 2-isopropylmalate synthase from cytophaga hutchinsonii 0.9002 19 268
3rmj-assembly1.cif.gz_B crystal structure of truncated alpha-isopropylmalate synthase from neisseria meningitidis 0.8749 18 314
3rmj-assembly1.cif.gz_A crystal structure of truncated alpha-isopropylmalate synthase from neisseria meningitidis 0.8729 18 314
ID Description Score Start End Superfamily
af_I1NJA3_77_365_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.958 17 268 3.20.20.70
af_Q57926_26_296_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9324 20 270 3.20.20.70
3ewbX00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.932 19 267 3.20.20.70
4ov9A01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9284 17 271 3.20.20.70
3eegB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9059 19 268 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A379ALI8-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) 0.9668 41 225 GO:0003852
GO:0005829
GO:0009098
AF-A0A3C1BQ21-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) 0.9656 90 228 GO:0003852
GO:0009098
AF-A0A7Y1X475-F1-model_v4 deleted 0.9631 96 184
AF-A0A356E3S8-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) 0.9619 19 250 GO:0003852
GO:0009098
AF-A0A2E1CNT7-F1-model_v4 2-isopropylmalate synthase (EC 2.3.3.13) (Alpha-IPM synthase) 0.961 15 264 GO:0003852
GO:0005829
GO:0009098

Map