F378920

General Info

Members Datasets Scaffolds Average Seq Length
273 144 273 225

Family's Representative Sequence

Representative Sequence 3300005549|Ga0070704_100032817|Ga0070704_1000328172
Length 269
Sequence LTFHRFGLWRLERHDFGLKSVMVATGRGQSKALQKLCTAMKRKLIVAIDGPSGAGKSTLGRLLARALNLLYIDTGSMYRAVALAVMESSISATDDVAVGSLARRVDIDLQGDPDSLRVTLGGVDVTERIRSEEVTDLSSIISTIPEVRRAMVARQREMGKRGAVLNGRDIGTVVFPDADIKFFLTAVPQERATRRFNEERAQDPKANFEETFADMAERDARDSTRADSPLKSADDAIVVDSTGLSINEVFEKMMSHVEKKSGGKPPFPT

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
44 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
58 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
67 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
68 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
69 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
72 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
73 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
74 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
112 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
115 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
122 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
123 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
124 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
125 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
126 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
127 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
130 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
131 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
133 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
134 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
142 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
143 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
144 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.73
Rhizosphere 97.8
Stem 0
Stem Tuber 0
Unclassified 1.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10003131 3300003203 Bacteria 7773
2 rootL2_10048966 3300003322 Bacteria 9404
3 Ga0065714_10064425 3300005288 Bacteria 189652
4 Ga0065704_10002882 3300005289 Bacteria 5933
5 Ga0065704_10004939 3300005289 Bacteria 4076
6 Ga0065712_10067727 3300005290 Bacteria 189643
7 Ga0065715_10039154 3300005293 Bacteria 1042
8 Ga0065715_10089238 3300005293 Bacteria 12055
9 Ga0065715_10145553 3300005293 Bacteria 1793
10 Ga0065715_10340303 3300005293 Bacteria 968
11 Ga0065707_10018720 3300005295 Bacteria 2352
12 Ga0065707_10132833 3300005295 Unclassified 1891
13 Ga0070670_100000223 3300005331 Bacteria 52272
14 Ga0070670_100038548 3300005331 Bacteria 4109
15 Ga0068869_100007921 3300005334 Bacteria 6824
16 Ga0068869_100017766 3300005334 Bacteria 4831
17 Ga0068869_100162576 3300005334 Bacteria 1739
18 Ga0068869_100207873 3300005334 Bacteria 1546
19 Ga0068869_100316838 3300005334 Unclassified 1264
20 Ga0070680_100004682 3300005336 Bacteria 10291
21 Ga0068868_100084910 3300005338 Bacteria 2543
22 Ga0070687_100051358 3300005343 Unclassified 2134
23 Ga0070687_100071269 3300005343 Bacteria 1867
24 Ga0070669_100001057 3300005353 Bacteria 20127
25 Ga0070669_100233958 3300005353 Bacteria 1457
26 Ga0070669_100293354 3300005353 Unclassified 1306
27 Ga0070673_100011459 3300005364 Bacteria 6050
28 Ga0070673_100357316 3300005364 Bacteria 1298
29 Ga0070673_100415158 3300005364 Unclassified 1206
30 Ga0070673_101027198 3300005364 Bacteria 768
31 Ga0070667_100115115 3300005367 Bacteria 2335
32 Ga0070701_10040538 3300005438 Bacteria 2367
33 Ga0070701_10075530 3300005438 Bacteria 1812
34 Ga0070701_10202204 3300005438 Bacteria 1175
35 Ga0070705_100221787 3300005440 Bacteria 1310
36 Ga0070700_100040892 3300005441 Bacteria 2840
37 Ga0070694_100003934 3300005444 Bacteria 8887
38 Ga0070694_100029619 3300005444 Unclassified 3574
39 Ga0070694_100087675 3300005444 Unclassified 2177
40 Ga0070694_100123265 3300005444 Bacteria 1862
41 Ga0070708_100331910 3300005445 Unclassified 1433
42 Ga0070708_100431084 3300005445 Bacteria 1243
43 Ga0070662_100372327 3300005457 Unclassified 1174
44 Ga0068867_100018547 3300005459 Bacteria 4945
45 Ga0068867_100029298 3300005459 Bacteria 3966
46 Ga0068867_100121836 3300005459 Bacteria 2017
47 Ga0070706_100012820 3300005467 Bacteria 7759
48 Ga0070706_100102229 3300005467 Bacteria 2664
49 Ga0070706_100304532 3300005467 Bacteria 1487
50 Ga0070707_100024836 3300005468 Bacteria 5680
51 Ga0070707_100165238 3300005468 Bacteria 2157
52 Ga0070698_100002328 3300005471 Bacteria 21019
53 Ga0070698_100010163 3300005471 Bacteria 10055
54 Ga0070698_100079761 3300005471 Bacteria 3269
55 Ga0070698_100205166 3300005471 Bacteria 1906
56 Ga0070698_100274300 3300005471 Unclassified 1618
57 Ga0070699_100011481 3300005518 Bacteria 7648
58 Ga0070699_100067183 3300005518 Bacteria 3113
59 Ga0070697_100003035 3300005536 Bacteria 12893
60 Ga0070697_100014211 3300005536 Bacteria 6253
61 Ga0070697_100026263 3300005536 Bacteria 4650
62 Ga0070697_100038748 3300005536 Bacteria 3852
63 Ga0070697_100089627 3300005536 Unclassified 2541
64 Ga0070697_100134364 3300005536 Bacteria 2077
65 Ga0070686_100009060 3300005544 Bacteria 5582
66 Ga0070686_100262527 3300005544 Bacteria 1266
67 Ga0070695_100194367 3300005545 Unclassified 1446
68 Ga0070696_100027235 3300005546 Bacteria 3893
69 Ga0070696_100128345 3300005546 Unclassified 1842
70 Ga0070696_100248308 3300005546 Bacteria 1345
71 Ga0070693_100076891 3300005547 Unclassified 1979
72 Ga0070693_100152706 3300005547 Unclassified 1464
73 Ga0070693_100403492 3300005547 Bacteria 948
74 Ga0070704_100032817 3300005549 Unclassified 3506
75 Ga0070704_100188509 3300005549 Bacteria 1656
76 Ga0068857_100611215 3300005577 Bacteria 1031
77 Ga0068854_100318287 3300005578 Unclassified 1264
78 Ga0070702_100038195 3300005615 Unclassified 2672
79 Ga0070702_100102499 3300005615 Bacteria 1758
80 Ga0068859_100029940 3300005617 Bacteria 5461
81 Ga0068859_100175656 3300005617 Bacteria 2223
82 Ga0068859_100950881 3300005617 Unclassified 942
83 Ga0068859_101050152 3300005617 Bacteria 895
84 Ga0068864_100152048 3300005618 Bacteria 2097
85 Ga0068861_100051813 3300005719 Bacteria 3118
86 Ga0068861_100143024 3300005719 Bacteria 1954
87 Ga0068863_100130969 3300005841 Bacteria 2395
88 Ga0068863_100141444 3300005841 Bacteria 2300
89 Ga0068858_100038123 3300005842 Bacteria 4457
90 Ga0068858_100111751 3300005842 Bacteria 2552
91 Ga0068860_100102189 3300005843 Bacteria 2735
92 Ga0068860_100135478 3300005843 Bacteria 2365
93 Ga0068860_100203738 3300005843 Bacteria 1918
94 Ga0068860_100609800 3300005843 Bacteria 1097
95 Ga0068862_100006395 3300005844 Bacteria 9795
96 Ga0068862_100023295 3300005844 Bacteria 5187
97 Ga0081540_1048115 3300005983 Bacteria 2138
98 Ga0081539_10000049 3300005985 Bacteria 271978
99 Ga0097621_100084857 3300006237 Bacteria 2641
100 Ga0068871_100007424 3300006358 Bacteria 7831
101 Ga0075428_100665267 3300006844 Bacteria 1110
102 Ga0075430_100252758 3300006846 Bacteria 1460
103 Ga0075431_100434313 3300006847 Bacteria 1311
104 Ga0075433_10021331 3300006852 Bacteria 5432
105 Ga0075434_100033532 3300006871 Bacteria 5068
106 Ga0075434_100135735 3300006871 Bacteria 2479
107 Ga0075429_100023392 3300006880 Bacteria 5363
108 Ga0075429_100025873 3300006880 Bacteria 5094
109 Ga0075429_100260049 3300006880 Bacteria 1519
110 Ga0075436_100003178 3300006914 Bacteria 11268
111 Ga0097620_100023404 3300006931 Bacteria 6199
112 Ga0097620_100029940 3300006931 Bacteria 5461
113 Ga0097620_100175657 3300006931 Bacteria 2223
114 Ga0097620_100950931 3300006931 Unclassified 942
115 Ga0097620_101050117 3300006931 Bacteria 895
116 Ga0075435_100377814 3300007076 Bacteria 1217
117 Ga0111539_10003487 3300009094 Bacteria 20733
118 Ga0111539_10399694 3300009094 Bacteria 1600
119 Ga0111539_10480099 3300009094 Bacteria 1448
120 Ga0111539_11062721 3300009094 Bacteria 941
121 Ga0105245_10768815 3300009098 Unclassified 1000
122 Ga0105245_10908517 3300009098 Unclassified 922
123 Ga0114129_10074744 3300009147 Bacteria 4720
124 Ga0114129_10086741 3300009147 Unclassified 4341
125 Ga0114129_10170755 3300009147 Bacteria 2965
126 Ga0114129_10198440 3300009147 Bacteria 2719
127 Ga0114129_10628574 3300009147 Bacteria 1388
128 Ga0105243_10165228 3300009148 Bacteria 1912
129 Ga0105243_10472866 3300009148 Bacteria 1181
130 Ga0105241_10159901 3300009174 Bacteria 1851
131 Ga0105242_10077159 3300009176 Bacteria 2779
132 Ga0105242_10496367 3300009176 Bacteria 1160
133 Ga0105248_10002033 3300009177 Bacteria 22435
134 Ga0105248_10030522 3300009177 Bacteria 6020
135 Ga0105248_10193807 3300009177 Bacteria 2290
136 Ga0105248_10576032 3300009177 Bacteria 1270
137 Ga0105248_10897454 3300009177 Bacteria 1001
138 Ga0105249_10028182 3300009553 Bacteria 5071
139 Ga0105249_10133973 3300009553 Bacteria 2369
140 Ga0105249_10447107 3300009553 Bacteria 1330
141 Ga0105246_10075502 3300011119 Bacteria 2386
142 Ga0105246_10166931 3300011119 Bacteria 1682
143 Ga0105246_10368988 3300011119 Bacteria 1182
144 Ga0105246_10603568 3300011119 Bacteria 949
145 Ga0157373_10021382 3300013100 Bacteria 4700
146 Ga0157373_10189886 3300013100 Unclassified 1448
147 Ga0157374_10043476 3300013296 Bacteria 4151
148 Ga0157374_10161023 3300013296 Bacteria 2186
149 Ga0157378_10064576 3300013297 Bacteria 3275
150 Ga0157378_10069945 3300013297 Bacteria 3150
151 Ga0157378_10228873 3300013297 Bacteria 1771
152 Ga0163162_10006793 3300013306 Bacteria 11099
153 Ga0163162_10081895 3300013306 Bacteria 3299
154 Ga0163162_10370643 3300013306 Bacteria 1565
155 Ga0157375_10007555 3300013308 Bacteria 9504
156 Ga0157375_10111437 3300013308 Bacteria 2835
157 Ga0157375_10264152 3300013308 Bacteria 1883
158 Ga0157375_10434359 3300013308 Bacteria 1479
159 Ga0157375_10883222 3300013308 Bacteria 1039
160 Ga0163163_10056942 3300014325 Bacteria 3865
161 Ga0163163_10161756 3300014325 Bacteria 2284
162 Ga0163163_10322542 3300014325 Bacteria 1598
163 Ga0157380_10015056 3300014326 Bacteria 5674
164 Ga0157380_10040316 3300014326 Bacteria 3637
165 Ga0157380_10052653 3300014326 Bacteria 3224
166 Ga0157380_10054426 3300014326 Bacteria 3176
167 Ga0157377_10001758 3300014745 Bacteria 9443
168 Ga0157377_10407761 3300014745 Bacteria 927
169 Ga0157376_10027555 3300014969 Bacteria 4506
170 Ga0157376_10111098 3300014969 Bacteria 2413
171 Ga0163161_10136229 3300017792 Unclassified 1856
172 Ga0213876_10213801 3300021384 Bacteria 1025
173 Ga0207680_10145403 3300025903 Bacteria 1576
174 Ga0207645_10034751 3300025907 Bacteria 3238
175 Ga0207684_10000053 3300025910 Bacteria 225260
176 Ga0207684_10004570 3300025910 Bacteria 13004
177 Ga0207654_10104829 3300025911 Bacteria 1749
178 Ga0207671_10485733 3300025914 Bacteria 984
179 Ga0207660_10021583 3300025917 Bacteria 4332
180 Ga0207662_10012641 3300025918 Bacteria 4705
181 Ga0207662_10091028 3300025918 Unclassified 1876
182 Ga0207662_10361701 3300025918 Bacteria 977
183 Ga0207657_10143357 3300025919 Bacteria 1950
184 Ga0207646_10169090 3300025922 Bacteria 1974
185 Ga0207681_10000486 3300025923 Bacteria 27828
186 Ga0207650_10000486 3300025925 Bacteria 33106
187 Ga0207644_10046652 3300025931 Bacteria 3088
188 Ga0207706_10083359 3300025933 Bacteria 2811
189 Ga0207686_10090825 3300025934 Bacteria 2016
190 Ga0207709_10422409 3300025935 Unclassified 1024
191 Ga0207704_10073988 3300025938 Unclassified 2172
192 Ga0207711_10020016 3300025941 Bacteria 5577
193 Ga0207711_10069514 3300025941 Bacteria 3052
194 Ga0207711_10232560 3300025941 Bacteria 1688
195 Ga0207689_10007035 3300025942 Bacteria 9890
196 Ga0207689_10018670 3300025942 Bacteria 5851
197 Ga0207689_10032984 3300025942 Bacteria 4304
198 Ga0207689_10352855 3300025942 Bacteria 1223
199 Ga0207651_10024314 3300025960 Bacteria 3745
200 Ga0207651_10271843 3300025960 Bacteria 1396
201 Ga0207651_10375805 3300025960 Bacteria 1203
202 Ga0207712_10028043 3300025961 Bacteria 3764
203 Ga0207712_10486993 3300025961 Bacteria 1052
204 Ga0207640_10442579 3300025981 Bacteria 1069
205 Ga0207658_10027832 3300025986 Bacteria 3976
206 Ga0207677_10659335 3300026023 Bacteria 924
207 Ga0207677_10712874 3300026023 Unclassified 891
208 Ga0207703_10161590 3300026035 Bacteria 1962
209 Ga0207703_10918609 3300026035 Bacteria 838
210 Ga0207708_10003846 3300026075 Bacteria 11062
211 Ga0207708_10046501 3300026075 Bacteria 3305
212 Ga0207708_10057775 3300026075 Bacteria 2960
213 Ga0207708_10230920 3300026075 Bacteria 1485
214 Ga0207641_10109920 3300026088 Bacteria 2442
215 Ga0207648_10055036 3300026089 Bacteria 3474
216 Ga0207648_10080021 3300026089 Bacteria 2851
217 Ga0207648_10160334 3300026089 Bacteria 1986
218 Ga0207648_10175248 3300026089 Unclassified 1896
219 Ga0207648_10345575 3300026089 Bacteria 1340
220 Ga0207676_10003823 3300026095 Bacteria 10636
221 Ga0207674_10000058 3300026116 Bacteria 113012
222 Ga0207675_100045176 3300026118 Bacteria 4115
223 Ga0207675_100047815 3300026118 Bacteria 3993
224 Ga0207675_100053554 3300026118 Bacteria 3765
225 Ga0207675_100395946 3300026118 Bacteria 1360
226 Ga0207675_100710356 3300026118 Bacteria 1015
227 Ga0207683_10168493 3300026121 Bacteria 1983
228 Ga0207698_10318520 3300026142 Bacteria 1455
229 Ga0207428_10181118 3300027907 Bacteria 1592
230 Ga0268265_10024896 3300028380 Bacteria 4241
231 Ga0268264_10054303 3300028381 Bacteria 3345
232 Ga0268264_10445385 3300028381 Unclassified 1254
233 Ga0307513_10012762 3300031456 Bacteria 10348
234 Ga0307405_10058997 3300031731 Unclassified 2417
235 Ga0307416_100253065 3300032002 Bacteria 1716
236 Ga0373932_0147702 3300035112 Bacteria 804
237 Ga0373939_0185526 3300035114 Unclassified 778
238 Ga0395900_0017200 3300037418 Bacteria 7379
239 Ga0395898_0403572 3300037466 Bacteria 1303
240 Ga0395905_0384745 3300037471 Bacteria 1297
241 Ga0395901_0084395 3300038443 Bacteria 3320
242 Ga0436365_0127135 3300039437 Bacteria 1284
243 Ga0439448_0045886 3300042005 Bacteria 1423
244 Ga0439462_0074673 3300042015 Unclassified 922
245 Ga0439458_0007829 3300042157 Bacteria 2378
246 Ga0439434_0042274 3300042435 Bacteria 1401
247 Ga0495632_0026354 3300046519 Bacteria 3061
248 Ga0495658_0062069 3300046683 Bacteria 2148
249 Ga0495636_0247806 3300047318 Bacteria 823
250 Ga0495672_0072788 3300047320 Bacteria 1940
251 Ga0496106_0074710 3300048909 Bacteria 2595
252 Ga0496107_0134155 3300048910 Bacteria 1829
253 Ga0501042_0278043 3300049578 Bacteria 1209
254 Ga0501074_0563533 3300049590 Bacteria 806
255 Ga0501076_0280394 3300049592 Bacteria 1365
256 Ga0501076_0926944 3300049592 Bacteria 718
257 Ga0501077_0374689 3300049593 Bacteria 909
258 nmdc:mga05p37_277510_c1 3300050507 Bacteria 2000
259 nmdc:mga05p37_453601_c1 3300050507 Bacteria 1483
260 nmdc:mga05p37_936510_c1 3300050507 Bacteria 929
261 nmdc:mga09592_181817_c1 3300050508 Bacteria 1819
262 nmdc:mga09592_222245_c1 3300050508 Bacteria 1636
263 nmdc:mga09592_320637_c1 3300050508 Bacteria 1342
264 nmdc:mga0qj67_203612_c1 3300050509 Bacteria 1608
265 nmdc:mga06r32_533479_c1 3300050510 Bacteria 1149
266 nmdc:mga08y16_36240_c1 3300050511 Bacteria 5180
267 nmdc:mga08y16_615616_c1 3300050511 Bacteria 1093
268 nmdc:mga0n895_1128511_c1 3300050512 Viruses 760
269 nmdc:mga0n895_688853_c1 3300050512 Unclassified 1019
270 nmdc:mga08x19_856_c1 3300050514 Bacteria 19311
271 nmdc:mga0a205_604316_c1 3300050515 Bacteria 950
272 Ga0501084_0635583 3300054114 Bacteria 901
273 Ga0501082_0364662 3300060353 Bacteria 1260

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005547 Ga0070693_100152706 Ga0070693_1001527062 214
2 3300005577 Ga0068857_100611215 Ga0068857_1006112152 214
3 3300005615 Ga0070702_100038195 Ga0070702_1000381953 214
4 3300009094 Ga0111539_10480099 Ga0111539_104800993 214
5 3300042005 Ga0439448_0045886 Ga0439448_0045886_675_1373 214
6 3300042157 Ga0439458_0007829 Ga0439458_0007829_773_1471 214
7 3300050511 nmdc:mga08y16_615616_c1 nmdc:mga08y16_615616_c1_373_1017 214
8 3300005471 Ga0070698_100205166 Ga0070698_1002051661 215
9 3300005617 Ga0068859_101050152 Ga0068859_1010501522 215
10 3300005842 Ga0068858_100038123 Ga0068858_1000381235 215
11 3300005843 Ga0068860_100102189 Ga0068860_1001021892 215
12 3300006880 Ga0075429_100023392 Ga0075429_1000233922 215
13 3300006931 Ga0097620_101050117 Ga0097620_1010501172 215
14 3300009148 Ga0105243_10472866 Ga0105243_104728662 215
15 3300009176 Ga0105242_10077159 Ga0105242_100771593 215
16 3300025911 Ga0207654_10104829 Ga0207654_101048292 215
17 3300025934 Ga0207686_10090825 Ga0207686_100908252 215
18 3300026089 Ga0207648_10345575 Ga0207648_103455752 215
19 3300031731 Ga0307405_10058997 Ga0307405_100589972 215
20 3300050508 nmdc:mga09592_222245_c1 nmdc:mga09592_222245_c1_933_1586 215
21 3300005334 Ga0068869_100162576 Ga0068869_1001625762 216
22 3300009148 Ga0105243_10165228 Ga0105243_101652283 216
23 3300011119 Ga0105246_10166931 Ga0105246_101669311 216
24 3300014325 Ga0163163_10161756 Ga0163163_101617562 216
25 3300025942 Ga0207689_10018670 Ga0207689_100186704 216
26 3300005288 Ga0065714_10064425 Ga0065714_1006442575 217
27 3300005290 Ga0065712_10067727 Ga0065712_1006772775 217
28 3300005293 Ga0065715_10089238 Ga0065715_100892383 217
29 3300005331 Ga0070670_100038548 Ga0070670_1000385483 217
30 3300005334 Ga0068869_100017766 Ga0068869_1000177662 217
31 3300005547 Ga0070693_100076891 Ga0070693_1000768912 217
32 3300011119 Ga0105246_10075502 Ga0105246_100755022 217
33 3300013100 Ga0157373_10021382 Ga0157373_100213824 217
34 3300013308 Ga0157375_10883222 Ga0157375_108832221 217
35 3300025914 Ga0207671_10485733 Ga0207671_104857332 217
36 3300025942 Ga0207689_10032984 Ga0207689_100329844 217
37 3300026035 Ga0207703_10161590 Ga0207703_101615902 217
38 3300048909 Ga0496106_0074710 Ga0496106_0074710_561_1220 217
39 3300048910 Ga0496107_0134155 Ga0496107_0134155_636_1295 217
40 3300003322 rootL2_10048966 rootL2_100489662 218
41 3300005293 Ga0065715_10039154 Ga0065715_100391541 218
42 3300005293 Ga0065715_10145553 Ga0065715_101455532 218
43 3300005336 Ga0070680_100004682 Ga0070680_1000046824 218
44 3300005353 Ga0070669_100233958 Ga0070669_1002339582 218
45 3300005364 Ga0070673_100415158 Ga0070673_1004151582 218
46 3300005438 Ga0070701_10202204 Ga0070701_102022042 218
47 3300005441 Ga0070700_100040892 Ga0070700_1000408922 218
48 3300005457 Ga0070662_100372327 Ga0070662_1003723272 218
49 3300005459 Ga0068867_100018547 Ga0068867_1000185472 218
50 3300005578 Ga0068854_100318287 Ga0068854_1003182872 218
51 3300005615 Ga0070702_100102499 Ga0070702_1001024992 218
52 3300005617 Ga0068859_100029940 Ga0068859_1000299407 218
53 3300005617 Ga0068859_100175656 Ga0068859_1001756563 218
54 3300005719 Ga0068861_100051813 Ga0068861_1000518134 218
55 3300005843 Ga0068860_100135478 Ga0068860_1001354782 218
56 3300005844 Ga0068862_100023295 Ga0068862_1000232952 218
57 3300006844 Ga0075428_100665267 Ga0075428_1006652672 218
58 3300006846 Ga0075430_100252758 Ga0075430_1002527582 218
59 3300006847 Ga0075431_100434313 Ga0075431_1004343132 218
60 3300006871 Ga0075434_100135735 Ga0075434_1001357351 218
61 3300006880 Ga0075429_100025873 Ga0075429_1000258736 218
62 3300006880 Ga0075429_100260049 Ga0075429_1002600492 218
63 3300006914 Ga0075436_100003178 Ga0075436_1000031785 218
64 3300006931 Ga0097620_100029940 Ga0097620_1000299407 218
65 3300006931 Ga0097620_100175657 Ga0097620_1001756572 218
66 3300009094 Ga0111539_10003487 Ga0111539_100034874 218
67 3300009147 Ga0114129_10074744 Ga0114129_100747442 218
68 3300009147 Ga0114129_10198440 Ga0114129_101984403 218
69 3300009177 Ga0105248_10002033 Ga0105248_1000203316 218
70 3300013100 Ga0157373_10189886 Ga0157373_101898862 218
71 3300013306 Ga0163162_10370643 Ga0163162_103706432 218
72 3300013308 Ga0157375_10434359 Ga0157375_104343591 218
73 3300014326 Ga0157380_10015056 Ga0157380_100150562 218
74 3300014745 Ga0157377_10407761 Ga0157377_104077612 218
75 3300025907 Ga0207645_10034751 Ga0207645_100347514 218
76 3300025917 Ga0207660_10021583 Ga0207660_100215833 218
77 3300025941 Ga0207711_10232560 Ga0207711_102325602 218
78 3300025942 Ga0207689_10352855 Ga0207689_103528552 218
79 3300025960 Ga0207651_10375805 Ga0207651_103758052 218
80 3300025981 Ga0207640_10442579 Ga0207640_104425792 218
81 3300026023 Ga0207677_10659335 Ga0207677_106593352 218
82 3300026075 Ga0207708_10046501 Ga0207708_100465014 218
83 3300026089 Ga0207648_10055036 Ga0207648_100550364 218
84 3300026118 Ga0207675_100047815 Ga0207675_1000478152 218
85 3300026121 Ga0207683_10168493 Ga0207683_101684931 218
86 3300028381 Ga0268264_10054303 Ga0268264_100543032 218
87 3300028381 Ga0268264_10445385 Ga0268264_104453852 218
88 3300035112 Ga0373932_0147702 Ga0373932_0147702_12_668 218
89 3300035114 Ga0373939_0185526 Ga0373939_0185526_88_744 218
90 3300049578 Ga0501042_0278043 Ga0501042_0278043_472_1128 218
91 3300049590 Ga0501074_0563533 Ga0501074_0563533_84_740 218
92 3300049592 Ga0501076_0280394 Ga0501076_0280394_296_952 218
93 3300050507 nmdc:mga05p37_277510_c1 nmdc:mga05p37_277510_c1_458_1114 218
94 3300050507 nmdc:mga05p37_453601_c1 nmdc:mga05p37_453601_c1_747_1403 218
95 3300050508 nmdc:mga09592_181817_c1 nmdc:mga09592_181817_c1_35_691 218
96 3300050508 nmdc:mga09592_320637_c1 nmdc:mga09592_320637_c1_551_1207 218
97 3300050509 nmdc:mga0qj67_203612_c1 nmdc:mga0qj67_203612_c1_383_1039 218
98 3300050510 nmdc:mga06r32_533479_c1 nmdc:mga06r32_533479_c1_461_1117 218
99 3300050511 nmdc:mga08y16_36240_c1 nmdc:mga08y16_36240_c1_4243_4899 218
100 3300050512 nmdc:mga0n895_688853_c1 nmdc:mga0n895_688853_c1_269_928 218
101 3300050514 nmdc:mga08x19_856_c1 nmdc:mga08x19_856_c1_6360_7016 218
102 3300060353 Ga0501082_0364662 Ga0501082_0364662_490_1146 218
103 3300005445 Ga0070708_100331910 Ga0070708_1003319102 219
104 3300005471 Ga0070698_100274300 Ga0070698_1002743002 219
105 3300005843 Ga0068860_100609800 Ga0068860_1006098001 219
106 3300006931 Ga0097620_100023404 Ga0097620_1000234046 219
107 3300009094 Ga0111539_11062721 Ga0111539_110627211 219
108 3300009147 Ga0114129_10086741 Ga0114129_100867411 219
109 3300009177 Ga0105248_10193807 Ga0105248_101938072 219
110 3300025910 Ga0207684_10000053 Ga0207684_10000053115 219
111 3300025919 Ga0207657_10143357 Ga0207657_101433572 219
112 3300025941 Ga0207711_10069514 Ga0207711_100695142 219
113 3300026035 Ga0207703_10918609 Ga0207703_109186091 219
114 3300026116 Ga0207674_10000058 Ga0207674_1000005864 219
115 3300026118 Ga0207675_100395946 Ga0207675_1003959462 219
116 3300049592 Ga0501076_0926944 Ga0501076_0926944_34_702 219
117 3300050512 nmdc:mga0n895_1128511_c1 nmdc:mga0n895_1128511_c1_61_726 219
118 3300050515 nmdc:mga0a205_604316_c1 nmdc:mga0a205_604316_c1_182_847 219
119 3300005289 Ga0065704_10004939 Ga0065704_100049393 220
120 3300005295 Ga0065707_10132833 Ga0065707_101328332 220
121 3300005334 Ga0068869_100007921 Ga0068869_1000079214 220
122 3300005334 Ga0068869_100207873 Ga0068869_1002078732 220
123 3300005343 Ga0070687_100051358 Ga0070687_1000513582 220
124 3300005353 Ga0070669_100293354 Ga0070669_1002933542 220
125 3300005364 Ga0070673_101027198 Ga0070673_1010271981 220
126 3300005444 Ga0070694_100003934 Ga0070694_1000039344 220
127 3300005444 Ga0070694_100087675 Ga0070694_1000876752 220
128 3300005459 Ga0068867_100121836 Ga0068867_1001218362 220
129 3300005544 Ga0070686_100009060 Ga0070686_1000090602 220
130 3300005545 Ga0070695_100194367 Ga0070695_1001943672 220
131 3300005546 Ga0070696_100128345 Ga0070696_1001283452 220
132 3300005719 Ga0068861_100143024 Ga0068861_1001430241 220
133 3300005841 Ga0068863_100141444 Ga0068863_1001414442 220
134 3300005842 Ga0068858_100111751 Ga0068858_1001117512 220
135 3300005843 Ga0068860_100203738 Ga0068860_1002037381 220
136 3300006852 Ga0075433_10021331 Ga0075433_100213314 220
137 3300006871 Ga0075434_100033532 Ga0075434_1000335323 220
138 3300009098 Ga0105245_10908517 Ga0105245_109085171 220
139 3300009177 Ga0105248_10897454 Ga0105248_108974542 220
140 3300014326 Ga0157380_10052653 Ga0157380_100526533 220
141 3300017792 Ga0163161_10136229 Ga0163161_101362292 220
142 3300025918 Ga0207662_10012641 Ga0207662_100126413 220
143 3300025918 Ga0207662_10091028 Ga0207662_100910282 220
144 3300025933 Ga0207706_10083359 Ga0207706_100833592 220
145 3300025938 Ga0207704_10073988 Ga0207704_100739882 220
146 3300025942 Ga0207689_10007035 Ga0207689_100070354 220
147 3300026075 Ga0207708_10230920 Ga0207708_102309202 220
148 3300026089 Ga0207648_10175248 Ga0207648_101752482 220
149 3300026118 Ga0207675_100045176 Ga0207675_1000451763 220
150 3300037418 Ga0395900_0017200 Ga0395900_0017200_3216_3887 220
151 3300037466 Ga0395898_0403572 Ga0395898_0403572_61_732 220
152 3300037471 Ga0395905_0384745 Ga0395905_0384745_448_1119 220
153 3300038443 Ga0395901_0084395 Ga0395901_0084395_2530_3201 220
154 3300046519 Ga0495632_0026354 Ga0495632_0026354_2273_2935 220
155 3300049593 Ga0501077_0374689 Ga0501077_0374689_23_691 220
156 3300054114 Ga0501084_0635583 Ga0501084_0635583_106_774 220
157 3300005293 Ga0065715_10340303 Ga0065715_103403032 221
158 3300005468 Ga0070707_100165238 Ga0070707_1001652382 221
159 3300005536 Ga0070697_100134364 Ga0070697_1001343642 221
160 3300005546 Ga0070696_100248308 Ga0070696_1002483081 221
161 3300007076 Ga0075435_100377814 Ga0075435_1003778141 221
162 3300009098 Ga0105245_10768815 Ga0105245_107688151 221
163 3300009174 Ga0105241_10159901 Ga0105241_101599012 221
164 3300009177 Ga0105248_10576032 Ga0105248_105760322 221
165 3300009553 Ga0105249_10133973 Ga0105249_101339734 221
166 3300013296 Ga0157374_10161023 Ga0157374_101610232 221
167 3300013297 Ga0157378_10064576 Ga0157378_100645762 221
168 3300013297 Ga0157378_10228873 Ga0157378_102288732 221
169 3300013306 Ga0163162_10081895 Ga0163162_100818952 221
170 3300013308 Ga0157375_10111437 Ga0157375_101114372 221
171 3300014326 Ga0157380_10040316 Ga0157380_100403163 221
172 3300014745 Ga0157377_10001758 Ga0157377_100017585 221
173 3300014969 Ga0157376_10111098 Ga0157376_101110982 221
174 3300025922 Ga0207646_10169090 Ga0207646_101690903 221
175 3300025961 Ga0207712_10028043 Ga0207712_100280433 221
176 3300025961 Ga0207712_10486993 Ga0207712_104869933 221
177 3300042015 Ga0439462_0074673 Ga0439462_0074673_94_762 221
178 3300014325 Ga0163163_10322542 Ga0163163_103225422 222
179 3300021384 Ga0213876_10213801 Ga0213876_102138012 222
180 3300025931 Ga0207644_10046652 Ga0207644_100466523 222
181 3300039437 Ga0436365_0127135 Ga0436365_0127135_317_1003 222
182 3300005289 Ga0065704_10002882 Ga0065704_100028824 223
183 3300005295 Ga0065707_10018720 Ga0065707_100187202 223
184 3300005331 Ga0070670_100000223 Ga0070670_10000022323 223
185 3300005334 Ga0068869_100316838 Ga0068869_1003168381 223
186 3300005338 Ga0068868_100084910 Ga0068868_1000849102 223
187 3300005343 Ga0070687_100071269 Ga0070687_1000712691 223
188 3300005353 Ga0070669_100001057 Ga0070669_1000010577 223
189 3300005364 Ga0070673_100011459 Ga0070673_1000114595 223
190 3300005364 Ga0070673_100357316 Ga0070673_1003573162 223
191 3300005367 Ga0070667_100115115 Ga0070667_1001151152 223
192 3300005438 Ga0070701_10040538 Ga0070701_100405381 223
193 3300005438 Ga0070701_10075530 Ga0070701_100755301 223
194 3300005440 Ga0070705_100221787 Ga0070705_1002217871 223
195 3300005444 Ga0070694_100029619 Ga0070694_1000296193 223
196 3300005444 Ga0070694_100123265 Ga0070694_1001232652 223
197 3300005445 Ga0070708_100431084 Ga0070708_1004310842 223
198 3300005459 Ga0068867_100029298 Ga0068867_1000292984 223
199 3300005467 Ga0070706_100012820 Ga0070706_1000128203 223
200 3300005467 Ga0070706_100102229 Ga0070706_1001022292 223
201 3300005467 Ga0070706_100304532 Ga0070706_1003045322 223
202 3300005468 Ga0070707_100024836 Ga0070707_1000248365 223
203 3300005471 Ga0070698_100002328 Ga0070698_1000023283 223
204 3300005471 Ga0070698_100010163 Ga0070698_1000101636 223
205 3300005471 Ga0070698_100079761 Ga0070698_1000797612 223
206 3300005518 Ga0070699_100011481 Ga0070699_1000114814 223
207 3300005518 Ga0070699_100067183 Ga0070699_1000671832 223
208 3300005536 Ga0070697_100003035 Ga0070697_1000030352 223
209 3300005536 Ga0070697_100014211 Ga0070697_1000142112 223
210 3300005536 Ga0070697_100026263 Ga0070697_1000262634 223
211 3300005536 Ga0070697_100038748 Ga0070697_1000387483 223
212 3300005536 Ga0070697_100089627 Ga0070697_1000896273 223
213 3300005544 Ga0070686_100262527 Ga0070686_1002625271 223
214 3300005546 Ga0070696_100027235 Ga0070696_1000272355 223
215 3300005547 Ga0070693_100403492 Ga0070693_1004034921 223
216 3300005549 Ga0070704_100032817 Ga0070704_1000328172 223
217 3300005549 Ga0070704_100188509 Ga0070704_1001885091 223
218 3300005617 Ga0068859_100950881 Ga0068859_1009508812 223
219 3300005618 Ga0068864_100152048 Ga0068864_1001520482 223
220 3300005841 Ga0068863_100130969 Ga0068863_1001309693 223
221 3300005844 Ga0068862_100006395 Ga0068862_1000063952 223
222 3300005983 Ga0081540_1048115 Ga0081540_10481152 223
223 3300006237 Ga0097621_100084857 Ga0097621_1000848573 223
224 3300006358 Ga0068871_100007424 Ga0068871_1000074246 223
225 3300006931 Ga0097620_100950931 Ga0097620_1009509312 223
226 3300009094 Ga0111539_10399694 Ga0111539_103996942 223
227 3300009147 Ga0114129_10170755 Ga0114129_101707552 223
228 3300009147 Ga0114129_10628574 Ga0114129_106285742 223
229 3300009176 Ga0105242_10496367 Ga0105242_104963672 223
230 3300009177 Ga0105248_10030522 Ga0105248_100305226 223
231 3300009553 Ga0105249_10028182 Ga0105249_100281824 223
232 3300009553 Ga0105249_10447107 Ga0105249_104471072 223
233 3300011119 Ga0105246_10368988 Ga0105246_103689882 223
234 3300011119 Ga0105246_10603568 Ga0105246_106035681 223
235 3300013296 Ga0157374_10043476 Ga0157374_100434762 223
236 3300013297 Ga0157378_10069945 Ga0157378_100699453 223
237 3300013306 Ga0163162_10006793 Ga0163162_100067938 223
238 3300013308 Ga0157375_10007555 Ga0157375_100075553 223
239 3300013308 Ga0157375_10264152 Ga0157375_102641521 223
240 3300014325 Ga0163163_10056942 Ga0163163_100569423 223
241 3300014326 Ga0157380_10054426 Ga0157380_100544263 223
242 3300014969 Ga0157376_10027555 Ga0157376_100275556 223
243 3300025903 Ga0207680_10145403 Ga0207680_101454031 223
244 3300025910 Ga0207684_10004570 Ga0207684_100045704 223
245 3300025918 Ga0207662_10361701 Ga0207662_103617011 223
246 3300025923 Ga0207681_10000486 Ga0207681_1000048619 223
247 3300025925 Ga0207650_10000486 Ga0207650_100004869 223
248 3300025935 Ga0207709_10422409 Ga0207709_104224092 223
249 3300025941 Ga0207711_10020016 Ga0207711_100200167 223
250 3300025960 Ga0207651_10024314 Ga0207651_100243144 223
251 3300025960 Ga0207651_10271843 Ga0207651_102718432 223
252 3300025986 Ga0207658_10027832 Ga0207658_100278322 223
253 3300026023 Ga0207677_10712874 Ga0207677_107128741 223
254 3300026075 Ga0207708_10003846 Ga0207708_100038462 223
255 3300026075 Ga0207708_10057775 Ga0207708_100577751 223
256 3300026088 Ga0207641_10109920 Ga0207641_101099203 223
257 3300026089 Ga0207648_10080021 Ga0207648_100800212 223
258 3300026089 Ga0207648_10160334 Ga0207648_101603344 223
259 3300026095 Ga0207676_10003823 Ga0207676_100038235 223
260 3300026118 Ga0207675_100053554 Ga0207675_1000535544 223
261 3300026118 Ga0207675_100710356 Ga0207675_1007103561 223
262 3300026142 Ga0207698_10318520 Ga0207698_103185203 223
263 3300027907 Ga0207428_10181118 Ga0207428_101811182 223
264 3300028380 Ga0268265_10024896 Ga0268265_100248961 223
265 3300032002 Ga0307416_100253065 Ga0307416_1002530652 223
266 3300042435 Ga0439434_0042274 Ga0439434_0042274_91_783 223
267 3300046683 Ga0495658_0062069 Ga0495658_0062069_768_1475 223
268 3300047318 Ga0495636_0247806 Ga0495636_0247806_103_789 223
269 3300047320 Ga0495672_0072788 Ga0495672_0072788_675_1361 223
270 3300050507 nmdc:mga05p37_936510_c1 nmdc:mga05p37_936510_c1_76_762 223
271 3300003203 JGI25406J46586_10003131 JGI25406J46586_100031315 225
272 3300005985 Ga0081539_10000049 Ga0081539_10000049160 225
273 3300031456 Ga0307513_10012762 Ga0307513_100127625 225

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02224

Cytidylate_kin

Cytidylate kinase

46

259

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1kdt-assembly1.cif.gz_A cytidine monophosphate kinase from e.coli in complex with 2',3'-dideoxy-cytidine monophosphate 0.943 2 214
3r20-assembly1.cif.gz_A crystal structure of cytidylate kinase from mycobacterium smegmatis 0.9388 1 210
3r8c-assembly1.cif.gz_A crystal structure of cytidylate kinase (cmk) from mycobacterium abscessus 0.9355 1 212
4die-assembly6.cif.gz_D crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.9332 1 212
4die-assembly3.cif.gz_A crystal structure of a cytidylate kinase cmk from mycobacterium abscessus bound to cytidine-5'-monophosphate 0.9266 1 212
ID Description Score Start End Superfamily
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9213 1 212 3.40.50.300
4dieB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9038 1 212 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8866 1 213 3.40.50.300
2h92C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8713 1 213 3.40.50.300
af_Q2FYF5_1_183_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8695 35 213 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1S1NI87-F1-model_v4 (d)CMP kinase (EC 2.7.4.25) 0.9634 1 145 GO:0004127
GO:0005524
AF-A0A5N8YJC9-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.9631 1 211 GO:0005524
GO:0005737
GO:0006220
GO:0036430
GO:0036431
AF-A0A3N9V2E8-F1-model_v4 deleted 0.9599 2 150
AF-A0A7T9J4I1-F1-model_v4 deleted 0.9581 1 212
AF-A0A7C2JG60-F1-model_v4 Cytidylate kinase (CK) (EC 2.7.4.25) (Cytidine monophosphate kinase) (CMP kinase) 0.958 1 214 GO:0004127
GO:0005524
GO:0005829
GO:0006220
GO:0015949

Feature Viewer

pLDDT pTM Quality
89.48 0.84 High
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Predicted Structure (AlphaFold2)

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