F378792

General Info

Members Datasets Scaffolds Average Seq Length
273 149 273 769

Family's Representative Sequence

Representative Sequence 3300003373|JGI25407J50210_10005149|JGI25407J50210_100051492
Length 841
Sequence MVSAAATGRPGYGRKRLTRKSDNGDEKRKAGRGANAHSGDGGPPNGTYGAQDITVLEGLEAVRKRPGMYIGSTGARGLHHLIYEVVDNSVDEALAGEADHVEIVIHPDNSVTVTDNGRGIPVDVMEKEGRPAAEVVLTVLHAGGKFGDGGGYKVSGGLHGVGVSVVNALAEWLHLTVWRDGHEWTQSYERGVPQGELKRGTKSDRRGTRISFLPDLEIFDTIDYDRTVLEQRFREMAFLTKGLKIDFRDERGERFETSFQYDGGIVDFIKYLHGQGTREPLHKKIVFVEDSSAIGEVEVALQWNDSYQEALLSFANNINTHEGGTHLSGFRSALTRTINAYARQKGELKEKDPNLQGEDVREGLTAIISVKIRDPQFEGQTKTKLGNPPVEGFVQAAVNRGLAEFLEENPTDANRIIRKTVDAARAREAARKARDLTRRKSALENSTLPGKLADCSVRDPALAELFIVEGDSAGGSAKQGRDRNTQAILPLRGKIINVEKNRIDKVLSNKEIRALITAIGTGIREEFDLSKARYHKVVVMTDADVDGAHIRTLVLTFLYREMPELIDAGYVYIAKPPLYKVKSGKRDVYIEKESELEEVLLRDKLEKMEVSDRGGKRFGLTHARWQKYGRLLKQYEGWAAALRAEFGHDPITXLEESSILDEGVTDPDDVIAILTGDDPEGEPYETELLSEDPVEIVARVVERKTGTAATYRLERAMFSRPEYSGFVKVHKELETLAGTPPFDVVLGKREARALSFEELRRRVLEVARDGVPLQRFKGLGEMNYDQLYDTTMDPENRTLQQVTIDDASAADQIFSMLMGDSVEPRREFIEGHAREVTNLDV

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
54 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
55 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
68 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
69 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
75 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
76 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
77 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
78 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
79 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
80 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
85 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
90 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
91 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
92 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
93 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
94 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
95 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
96 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
100 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
101 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
102 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
124 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
125 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
126 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
127 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
128 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
129 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
130 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
131 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
132 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
133 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
134 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
135 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
136 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
137 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
142 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.37
Nodule 0
Rhizoplane 9.89
Rhizosphere 89.38
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10002385 3300003203 Bacteria 8881
2 JGI25407J50210_10000166 3300003373 Bacteria 10648
3 JGI25407J50210_10000379 3300003373 Bacteria 8514
4 JGI25407J50210_10000409 3300003373 Bacteria 8301
5 JGI25407J50210_10001708 3300003373 Bacteria 5040
6 JGI25407J50210_10005149 3300003373 Bacteria 3205
7 JGI25407J50210_10006492 3300003373 Bacteria 2913
8 Ga0070683_100000499 3300005329 Bacteria 27715
9 Ga0068869_100001761 3300005334 Bacteria 12948
10 Ga0070682_100015459 3300005337 Bacteria 4423
11 Ga0068868_100041168 3300005338 Bacteria 3599
12 Ga0068868_100042068 3300005338 Bacteria 3563
13 Ga0070660_100011780 3300005339 Bacteria 6228
14 Ga0070668_100023788 3300005347 Bacteria 4636
15 Ga0070709_10037810 3300005434 Bacteria 2951
16 Ga0070713_100003556 3300005436 Bacteria 10295
17 Ga0070700_100016492 3300005441 Bacteria 4208
18 Ga0070663_100018945 3300005455 Bacteria 4525
19 Ga0070662_100017013 3300005457 Bacteria 4891
20 Ga0070681_10033109 3300005458 Bacteria 5188
21 Ga0070707_100002338 3300005468 Bacteria 18083
22 Ga0070699_100006152 3300005518 Bacteria 10485
23 Ga0070699_100007822 3300005518 Bacteria 9291
24 Ga0070679_100003840 3300005530 Bacteria 13800
25 Ga0070684_100004052 3300005535 Bacteria 11090
26 Ga0070684_100020263 3300005535 Bacteria 5516
27 Ga0070695_100000029 3300005545 Bacteria 53859
28 Ga0070693_100001888 3300005547 Bacteria 9576
29 Ga0070704_100000050 3300005549 Bacteria 38334
30 Ga0068857_100054839 3300005577 Bacteria 3537
31 Ga0068856_100069966 3300005614 Bacteria 3471
32 Ga0068859_100131590 3300005617 Bacteria 2573
33 Ga0081455_10003392 3300005937 Bacteria 18346
34 Ga0081455_10006251 3300005937 Bacteria 12824
35 Ga0081455_10007720 3300005937 Bacteria 11286
36 Ga0081455_10041292 3300005937 Bacteria 4058
37 Ga0081538_10000013 3300005981 Bacteria 151925
38 Ga0081538_10000027 3300005981 Bacteria 125924
39 Ga0081538_10000053 3300005981 Bacteria 109213
40 Ga0081538_10000100 3300005981 Bacteria 83917
41 Ga0081538_10000553 3300005981 Bacteria 41375
42 Ga0081538_10001157 3300005981 Bacteria 27885
43 Ga0081538_10001346 3300005981 Bacteria 25270
44 Ga0081538_10001451 3300005981 Bacteria 24366
45 Ga0081538_10001980 3300005981 Bacteria 20462
46 Ga0081538_10002475 3300005981 Bacteria 18032
47 Ga0081538_10003047 3300005981 Bacteria 15965
48 Ga0081538_10003278 3300005981 Bacteria 15371
49 Ga0081538_10004600 3300005981 Bacteria 12681
50 Ga0081538_10004832 3300005981 Bacteria 12282
51 Ga0081538_10007146 3300005981 Bacteria 9694
52 Ga0081538_10013197 3300005981 Bacteria 6557
53 Ga0081538_10015769 3300005981 Bacteria 5831
54 Ga0081538_10015866 3300005981 Bacteria 5808
55 Ga0081538_10018584 3300005981 Bacteria 5211
56 Ga0081538_10023558 3300005981 Bacteria 4421
57 Ga0081539_10000095 3300005985 Bacteria 204474
58 Ga0081539_10003675 3300005985 Bacteria 18388
59 Ga0081539_10006268 3300005985 Bacteria 11507
60 Ga0075364_10019344 3300006051 Bacteria 4273
61 Ga0075428_100006633 3300006844 Bacteria 12875
62 Ga0075428_100062140 3300006844 Bacteria 4090
63 Ga0075428_100167199 3300006844 Bacteria 2385
64 Ga0075430_100001679 3300006846 Bacteria 18097
65 Ga0075430_100030020 3300006846 Bacteria 4616
66 Ga0075431_100004010 3300006847 Bacteria 14352
67 Ga0075431_100019082 3300006847 Bacteria 6986
68 Ga0075431_100090637 3300006847 Bacteria 3156
69 Ga0075429_100004663 3300006880 Bacteria 11800
70 Ga0075429_100045265 3300006880 Bacteria 3828
71 Ga0097620_100131588 3300006931 Bacteria 2573
72 Ga0111539_10061218 3300009094 Bacteria 4460
73 Ga0111539_10083633 3300009094 Bacteria 3752
74 Ga0114129_10006693 3300009147 Bacteria 16367
75 Ga0114129_10024979 3300009147 Bacteria 8471
76 Ga0157369_10013040 3300013105 Bacteria 9414
77 Ga0157374_10012514 3300013296 Bacteria 7385
78 Ga0157372_10007615 3300013307 Bacteria 11515
79 Ga0207688_10013240 3300025901 Bacteria 4483
80 Ga0207707_10005126 3300025912 Bacteria 11487
81 Ga0207707_10077355 3300025912 Bacteria 2905
82 Ga0207657_10003322 3300025919 Bacteria 17215
83 Ga0207652_10007090 3300025921 Bacteria 9029
84 Ga0207687_10009805 3300025927 Bacteria 6268
85 Ga0207700_10000039 3300025928 Bacteria 102496
86 Ga0207664_10023473 3300025929 Bacteria 4622
87 Ga0207661_10000408 3300025944 Bacteria 27727
88 Ga0207712_10030045 3300025961 Bacteria 3651
89 Ga0207702_10025524 3300026078 Bacteria 4905
90 Ga0207676_10025239 3300026095 Bacteria 4410
91 Ga0207683_10001640 3300026121 Bacteria 20041
92 Ga0207428_10001046 3300027907 Bacteria 30438
93 Ga0268265_10058231 3300028380 Bacteria 2949
94 Ga0265338_10010751 3300028800 Bacteria 10680
95 Ga0265338_10044575 3300028800 Bacteria 4093
96 Ga0265338_10049452 3300028800 Bacteria 3811
97 Ga0265330_10008007 3300031235 Bacteria 5118
98 Ga0265339_10000021 3300031249 Bacteria 175403
99 Ga0265339_10015595 3300031249 Bacteria 4551
100 Ga0265327_10000475 3300031251 Bacteria 70831
101 Ga0265327_10020387 3300031251 Bacteria 4042
102 Ga0265316_10000198 3300031344 Bacteria 69877
103 Ga0265316_10000835 3300031344 Bacteria 34154
104 Ga0265316_10009794 3300031344 Bacteria 8798
105 Ga0307408_100009936 3300031548 Bacteria 6269
106 Ga0265313_10012815 3300031595 Bacteria 5088
107 Ga0265314_10000995 3300031711 Bacteria 33216
108 Ga0265342_10000088 3300031712 Bacteria 99804
109 Ga0307413_10029195 3300031824 Bacteria 3082
110 Ga0307406_10003462 3300031901 Bacteria 8583
111 Ga0307406_10044081 3300031901 Bacteria 2794
112 Ga0307412_10011571 3300031911 Bacteria 5116
113 Ga0307409_100057904 3300031995 Bacteria 3006
114 Ga0307416_100001917 3300032002 Bacteria 11611
115 Ga0307416_100100747 3300032002 Bacteria 2513
116 Ga0307411_10041419 3300032005 Bacteria 2930
117 Ga0307415_100010298 3300032126 Bacteria 5287
118 Ga0307415_100065685 3300032126 Bacteria 2529
119 Ga0395899_0005188 3300037312 Bacteria 10137
120 Ga0395899_0017090 3300037312 Bacteria 5526
121 Ga0395899_0030565 3300037312 Bacteria 4050
122 Ga0395900_0017142 3300037418 Bacteria 7393
123 Ga0395900_0018705 3300037418 Bacteria 7065
124 Ga0395900_0031020 3300037418 Bacteria 5490
125 Ga0395900_0089228 3300037418 Bacteria 3169
126 Ga0395898_0003232 3300037466 Bacteria 18305
127 Ga0395898_0023076 3300037466 Bacteria 6292
128 Ga0395898_0032063 3300037466 Bacteria 5244
129 Ga0395905_0018299 3300037471 Bacteria 6650
130 Ga0395905_0048258 3300037471 Bacteria 3990
131 Ga0395905_0074903 3300037471 Bacteria 3172
132 Ga0395905_0080708 3300037471 Bacteria 3049
133 Ga0395901_0008073 3300038443 Bacteria 10633
134 Ga0395901_0012137 3300038443 Bacteria 8741
135 Ga0395901_0013372 3300038443 Bacteria 8340
136 Ga0395901_0036061 3300038443 Bacteria 5109
137 Ga0395901_0056682 3300038443 Bacteria 4076
138 Ga0395901_0075495 3300038443 Bacteria 3516
139 Ga0395901_0082976 3300038443 Bacteria 3349
140 Ga0436360_1185552 3300039438 Bacteria 2649
141 Ga0436363_1511213 3300039450 Bacteria 2272
142 Ga0439442_002384 3300042002 Bacteria 3689
143 Ga0439449_0026428 3300042007 Bacteria 2167
144 Ga0439462_0000415 3300042015 Bacteria 8260
145 Ga0451577_0000003 3300042876 Bacteria 921850
146 Ga0453683_0003997 3300044673 Bacteria 10657
147 Ga0466963_0002451 3300044694 Bacteria 10372
148 Ga0466963_0018105 3300044694 Bacteria 4398
149 Ga0466964_0000934 3300044706 Bacteria 9638
150 Ga0453684_0000018 3300044712 Bacteria 921850
151 Ga0453684_0000175 3300044712 Bacteria 283848
152 Ga0453684_0008998 3300044712 Bacteria 17640
153 Ga0453684_0011203 3300044712 Bacteria 15097
154 Ga0453684_0110572 3300044712 Bacteria 3339
155 Ga0466968_0021686 3300044735 Bacteria 2603
156 Ga0466957_0000671 3300044842 Bacteria 17426
157 Ga0466957_0000888 3300044842 Bacteria 15314
158 Ga0451576_0000014 3300045051 Bacteria 593082
159 Ga0451576_0007377 3300045051 Bacteria 13170
160 Ga0466958_0060814 3300045836 Bacteria 2300
161 Ga0466967_0004525 3300045976 Bacteria 9403
162 Ga0466967_0040714 3300045976 Bacteria 4001
163 Ga0466967_0091594 3300045976 Bacteria 2763
164 Ga0495653_0030471 3300046463 Bacteria 4296
165 Ga0495664_0000051 3300046477 Bacteria 59070
166 Ga0495618_0000107 3300046514 Bacteria 60640
167 Ga0495630_0000180 3300046517 Bacteria 49275
168 Ga0495630_0015339 3300046517 Bacteria 5595
169 Ga0495586_0001604 3300046535 Bacteria 12432
170 Ga0495645_0000032 3300046543 Bacteria 106333
171 Ga0495645_0000242 3300046543 Bacteria 39881
172 Ga0495657_0000016 3300046675 Bacteria 183127
173 Ga0495613_0050364 3300046689 Bacteria 3071
174 Ga0496100_0003460 3300048903 Bacteria 8236
175 Ga0496100_0031062 3300048903 Bacteria 3317
176 Ga0496102_0000087 3300048905 Bacteria 130138
177 Ga0496102_0005208 3300048905 Bacteria 11039
178 Ga0496102_0023766 3300048905 Bacteria 5446
179 Ga0496102_0040575 3300048905 Bacteria 4210
180 Ga0496103_0000016 3300048906 Bacteria 266127
181 Ga0496103_0013529 3300048906 Bacteria 4839
182 Ga0496104_0013074 3300048907 Bacteria 7477
183 Ga0496106_0001301 3300048909 Bacteria 18736
184 Ga0496106_0026671 3300048909 Bacteria 4303
185 Ga0496107_0000655 3300048910 Bacteria 19554
186 Ga0496108_0017321 3300048911 Bacteria 5894
187 Ga0496109_0001139 3300048912 Bacteria 22101
188 Ga0496109_0031827 3300048912 Bacteria 4737
189 Ga0496110_0009310 3300048913 Bacteria 7945
190 Ga0496111_0029012 3300048914 Bacteria 3925
191 Ga0496111_0038135 3300048914 Bacteria 3442
192 Ga0496111_0075688 3300048914 Bacteria 2453
193 Ga0496112_0046249 3300048915 Bacteria 4268
194 Ga0496112_0057706 3300048915 Bacteria 3822
195 Ga0496113_0029373 3300048916 Bacteria 3969
196 Ga0496113_0033519 3300048916 Bacteria 3740
197 Ga0496114_0000461 3300048917 Bacteria 29870
198 Ga0496115_0000051 3300048918 Bacteria 107411
199 Ga0496115_0011489 3300048918 Bacteria 6639
200 Ga0496115_0018269 3300048918 Bacteria 5380
201 Ga0501031_0002437 3300049568 Bacteria 11841
202 Ga0501031_0002668 3300049568 Bacteria 11358
203 Ga0501033_0001828 3300049570 Bacteria 18532
204 Ga0501036_0001963 3300049572 Bacteria 15960
205 Ga0501036_0006596 3300049572 Bacteria 9427
206 Ga0501037_0002115 3300049573 Bacteria 14381
207 Ga0501038_0001305 3300049574 Bacteria 22713
208 Ga0501038_0006507 3300049574 Bacteria 10811
209 Ga0501038_0067086 3300049574 Bacteria 3053
210 Ga0501039_0003813 3300049575 Bacteria 11327
211 Ga0501039_0069437 3300049575 Bacteria 2736
212 Ga0501040_0002754 3300049576 Bacteria 11327
213 Ga0501040_0019695 3300049576 Bacteria 4490
214 Ga0501041_0008546 3300049577 Bacteria 6027
215 Ga0501042_0001543 3300049578 Bacteria 13643
216 Ga0501042_0013467 3300049578 Bacteria 5566
217 Ga0501043_0004354 3300049579 Bacteria 11518
218 Ga0501043_0023386 3300049579 Bacteria 4847
219 Ga0501046_0003150 3300049580 Bacteria 15227
220 Ga0501046_0019670 3300049580 Bacteria 5595
221 Ga0501046_0020388 3300049580 Bacteria 5484
222 Ga0501048_0009497 3300049582 Bacteria 7301
223 Ga0501048_0012503 3300049582 Bacteria 6317
224 Ga0501048_0015565 3300049582 Bacteria 5618
225 Ga0501068_0000380 3300049584 Bacteria 22330
226 Ga0501068_0003756 3300049584 Bacteria 8220
227 Ga0501068_0006983 3300049584 Bacteria 6245
228 Ga0501070_0019980 3300049586 Bacteria 5616
229 Ga0501071_0000530 3300049587 Bacteria 19533
230 Ga0501071_0001259 3300049587 Bacteria 14355
231 Ga0501072_0009442 3300049588 Bacteria 7417
232 Ga0501073_0002723 3300049589 Bacteria 13245
233 Ga0501074_0002976 3300049590 Bacteria 11906
234 Ga0501074_0004117 3300049590 Bacteria 10379
235 Ga0501074_0007210 3300049590 Bacteria 8030
236 Ga0501075_0001942 3300049591 Bacteria 13639
237 Ga0501075_0007095 3300049591 Bacteria 7747
238 Ga0501076_0003001 3300049592 Bacteria 11724
239 Ga0501076_0007185 3300049592 Bacteria 8095
240 Ga0501076_0020541 3300049592 Bacteria 5055
241 Ga0501077_0005598 3300049593 Bacteria 7649
242 Ga0501077_0027062 3300049593 Bacteria 3641
243 Ga0501249_001499 3300049679 Bacteria 4796
244 Ga0501257_004159 3300049686 Bacteria 3147
245 Ga0501225_0004965 3300049705 Bacteria 3930
246 Ga0501079_0013568 3300049741 Bacteria 6215
247 Ga0501079_0024309 3300049741 Bacteria 4648
248 Ga0501080_0002477 3300049742 Bacteria 16165
249 Ga0501080_0003954 3300049742 Bacteria 13120
250 Ga0501080_0078460 3300049742 Bacteria 3071
251 Ga0501081_0005845 3300049743 Bacteria 7963
252 Ga0501083_0001249 3300049744 Bacteria 17264
253 Ga0501272_001519 3300049769 Bacteria 2208
254 Ga0501035_0006713 3300049822 Bacteria 10756
255 Ga0501035_0074539 3300049822 Bacteria 3002
256 Ga0501045_0000951 3300049824 Bacteria 18911
257 Ga0501045_0002718 3300049824 Bacteria 12074
258 Ga0501045_0057761 3300049824 Bacteria 2840
259 nmdc:mga05p37_91124_c1 3300050507 Bacteria 3757
260 nmdc:mga09592_5285_c1 3300050508 Bacteria 10495
261 nmdc:mga0qj67_2636_c1 3300050509 Bacteria 12851
262 nmdc:mga0qj67_33530_c1 3300050509 Bacteria 4007
263 nmdc:mga0qj67_38244_c1 3300050509 Bacteria 3764
264 nmdc:mga06r32_23926_c1 3300050510 Bacteria 5661
265 nmdc:mga06r32_40071_c1 3300050510 Bacteria 4446
266 Ga0501084_0004444 3300054114 Bacteria 11448
267 Ga0501084_0004764 3300054114 Bacteria 11090
268 Ga0501082_0004655 3300060353 Bacteria 11966
269 Ga0501082_0010518 3300060353 Bacteria 7961
270 Ga0466962_0013018 3300061719 Bacteria 4001
271 Ga0530510_0001409 3300061734 Bacteria 16107
272 Ga0530510_0014693 3300061734 Bacteria 5527
273 Ga0530510_0024593 3300061734 Bacteria 4299

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300006844 Ga0075428_100167199 Ga0075428_1001671992 620
2 3300005518 Ga0070699_100006152 Ga0070699_1000061527 623
3 3300006844 Ga0075428_100062140 Ga0075428_1000621403 623
4 3300006880 Ga0075429_100004663 Ga0075429_1000046633 623
5 3300032126 Ga0307415_100065685 Ga0307415_1000656853 623
6 3300050508 nmdc:mga09592_5285_c1 nmdc:mga09592_5285_c1_2846_4786 623
7 3300006847 Ga0075431_100090637 Ga0075431_1000906371 624
8 3300031548 Ga0307408_100009936 Ga0307408_1000099366 624
9 3300032005 Ga0307411_10041419 Ga0307411_100414191 624
10 3300049679 Ga0501249_001499 Ga0501249_001499_2445_4376 624
11 3300049686 Ga0501257_004159 Ga0501257_004159_713_2644 624
12 3300049705 Ga0501225_0004965 Ga0501225_0004965_830_2761 624
13 3300049769 Ga0501272_001519 Ga0501272_001519_117_2048 624
14 3300050510 nmdc:mga06r32_40071_c1 nmdc:mga06r32_40071_c1_1644_3587 624
15 3300005468 Ga0070707_100002338 Ga0070707_10000233817 625
16 3300005518 Ga0070699_100007822 Ga0070699_1000078225 625
17 3300005549 Ga0070704_100000050 Ga0070704_1000000507 625
18 3300005617 Ga0068859_100131590 Ga0068859_1001315902 625
19 3300006931 Ga0097620_100131588 Ga0097620_1001315882 625
20 3300045051 Ga0451576_0007377 Ga0451576_0007377_3720_5927 629
21 3300042007 Ga0439449_0026428 Ga0439449_0026428_211_2142 631
22 3300044673 Ga0453683_0003997 Ga0453683_0003997_4629_6824 633
23 3300044712 Ga0453684_0110572 Ga0453684_0110572_496_2691 633
24 3300045051 Ga0451576_0000014 Ga0451576_0000014_578727_580922 633
25 3300042876 Ga0451577_0000003 Ga0451577_0000003_11367_13433 636
26 3300044712 Ga0453684_0000018 Ga0453684_0000018_809899_811965 636
27 3300044712 Ga0453684_0000175 Ga0453684_0000175_106030_108075 644
28 3300039450 Ga0436363_1511213 Ga0436363_1511213_26_2122 647
29 3300045836 Ga0466958_0060814 Ga0466958_0060814_16_2154 682
30 3300031251 Ga0265327_10000475 Ga0265327_1000047524 690
31 3300049824 Ga0501045_0057761 Ga0501045_0057761_14_2167 700
32 3300006844 Ga0075428_100006633 Ga0075428_10000663312 703
33 3300006847 Ga0075431_100019082 Ga0075431_1000190821 703
34 3300027907 Ga0207428_10001046 Ga0207428_1000104616 703
35 3300050509 nmdc:mga0qj67_38244_c1 nmdc:mga0qj67_38244_c1_375_2756 703
36 3300048905 Ga0496102_0005208 Ga0496102_0005208_5871_8129 734
37 3300048907 Ga0496104_0013074 Ga0496104_0013074_1987_4245 734
38 3300048914 Ga0496111_0075688 Ga0496111_0075688_19_2277 734
39 3300048917 Ga0496114_0000461 Ga0496114_0000461_3761_6019 734
40 3300048918 Ga0496115_0018269 Ga0496115_0018269_2568_4826 734
41 3300044712 Ga0453684_0011203 Ga0453684_0011203_10114_12570 744
42 3300009147 Ga0114129_10024979 Ga0114129_100249795 748
43 3300028380 Ga0268265_10058231 Ga0268265_100582312 750
44 3300013296 Ga0157374_10012514 Ga0157374_100125144 751
45 3300049568 Ga0501031_0002668 Ga0501031_0002668_6533_8914 752
46 3300049572 Ga0501036_0006596 Ga0501036_0006596_5946_8327 752
47 3300049574 Ga0501038_0001305 Ga0501038_0001305_13086_15467 752
48 3300049575 Ga0501039_0069437 Ga0501039_0069437_90_2471 752
49 3300049577 Ga0501041_0008546 Ga0501041_0008546_107_2488 752
50 3300049579 Ga0501043_0023386 Ga0501043_0023386_197_2578 752
51 3300049580 Ga0501046_0019670 Ga0501046_0019670_739_3120 752
52 3300049582 Ga0501048_0009497 Ga0501048_0009497_3850_6231 752
53 3300049584 Ga0501068_0003756 Ga0501068_0003756_2568_4949 752
54 3300049587 Ga0501071_0000530 Ga0501071_0000530_1918_4299 752
55 3300049588 Ga0501072_0009442 Ga0501072_0009442_3966_6347 752
56 3300049590 Ga0501074_0002976 Ga0501074_0002976_6857_9238 752
57 3300049592 Ga0501076_0003001 Ga0501076_0003001_3175_5556 752
58 3300049593 Ga0501077_0027062 Ga0501077_0027062_261_2642 752
59 3300049742 Ga0501080_0003954 Ga0501080_0003954_6968_9349 752
60 3300049743 Ga0501081_0005845 Ga0501081_0005845_5520_7901 752
61 3300049824 Ga0501045_0002718 Ga0501045_0002718_7041_9422 752
62 3300054114 Ga0501084_0004764 Ga0501084_0004764_5131_7512 752
63 3300060353 Ga0501082_0004655 Ga0501082_0004655_8779_11160 752
64 3300061734 Ga0530510_0014693 Ga0530510_0014693_3052_5433 752
65 3300031235 Ga0265330_10008007 Ga0265330_100080072 753
66 3300044842 Ga0466957_0000888 Ga0466957_0000888_9723_12041 754
67 3300045976 Ga0466967_0091594 Ga0466967_0091594_323_2641 754
68 3300005981 Ga0081538_10000100 Ga0081538_1000010022 755
69 3300050510 nmdc:mga06r32_23926_c1 nmdc:mga06r32_23926_c1_1912_4230 755
70 3300048909 Ga0496106_0026671 Ga0496106_0026671_1387_3696 756
71 3300048915 Ga0496112_0057706 Ga0496112_0057706_1095_3404 756
72 3300037471 Ga0395905_0074903 Ga0395905_0074903_838_3162 757
73 3300048911 Ga0496108_0017321 Ga0496108_0017321_1724_4042 757
74 3300048913 Ga0496110_0009310 Ga0496110_0009310_3102_5420 757
75 3300038443 Ga0395901_0013372 Ga0395901_0013372_4238_6553 759
76 3300005334 Ga0068869_100001761 Ga0068869_10000176111 761
77 3300005545 Ga0070695_100000029 Ga0070695_10000002947 763
78 3300013307 Ga0157372_10007615 Ga0157372_100076158 763
79 3300025912 Ga0207707_10077355 Ga0207707_100773552 763
80 3300048905 Ga0496102_0040575 Ga0496102_0040575_762_3146 763
81 3300048906 Ga0496103_0013529 Ga0496103_0013529_1771_4155 763
82 3300005981 Ga0081538_10003047 Ga0081538_1000304714 764
83 3300037312 Ga0395899_0005188 Ga0395899_0005188_7300_9684 764
84 3300037471 Ga0395905_0048258 Ga0395905_0048258_1160_3544 764
85 3300044694 Ga0466963_0002451 Ga0466963_0002451_6245_8629 764
86 3300044694 Ga0466963_0018105 Ga0466963_0018105_993_3377 764
87 3300044706 Ga0466964_0000934 Ga0466964_0000934_2322_4706 764
88 3300044735 Ga0466968_0021686 Ga0466968_0021686_181_2565 764
89 3300044842 Ga0466957_0000671 Ga0466957_0000671_4105_6489 764
90 3300045976 Ga0466967_0040714 Ga0466967_0040714_753_3137 764
91 3300061719 Ga0466962_0013018 Ga0466962_0013018_1471_3855 764
92 3300005981 Ga0081538_10001980 Ga0081538_1000198016 765
93 3300028800 Ga0265338_10044575 Ga0265338_100445753 765
94 3300031249 Ga0265339_10000021 Ga0265339_10000021147 765
95 3300031595 Ga0265313_10012815 Ga0265313_100128152 765
96 3300048912 Ga0496109_0001139 Ga0496109_0001139_6629_9061 766
97 3300038443 Ga0395901_0036061 Ga0395901_0036061_12_2435 767
98 3300038443 Ga0395901_0056682 Ga0395901_0056682_1640_4036 767
99 3300005338 Ga0068868_100042068 Ga0068868_1000420683 769
100 3300025901 Ga0207688_10013240 Ga0207688_100132402 769
101 3300048903 Ga0496100_0031062 Ga0496100_0031062_576_2984 769
102 3300028800 Ga0265338_10049452 Ga0265338_100494521 770
103 3300031249 Ga0265339_10015595 Ga0265339_100155952 770
104 3300031344 Ga0265316_10000198 Ga0265316_1000019827 770
105 3300031344 Ga0265316_10000835 Ga0265316_100008357 770
106 3300031344 Ga0265316_10009794 Ga0265316_100097942 770
107 3300031711 Ga0265314_10000995 Ga0265314_100009953 770
108 3300031712 Ga0265342_10000088 Ga0265342_1000008827 770
109 3300044712 Ga0453684_0008998 Ga0453684_0008998_10429_12885 770
110 3300037471 Ga0395905_0080708 Ga0395905_0080708_576_2975 772
111 3300049568 Ga0501031_0002437 Ga0501031_0002437_8411_10804 772
112 3300049570 Ga0501033_0001828 Ga0501033_0001828_650_3043 772
113 3300049572 Ga0501036_0001963 Ga0501036_0001963_534_2927 772
114 3300049573 Ga0501037_0002115 Ga0501037_0002115_7597_9990 772
115 3300049574 Ga0501038_0006507 Ga0501038_0006507_7711_10104 772
116 3300049575 Ga0501039_0003813 Ga0501039_0003813_5693_8086 772
117 3300049576 Ga0501040_0002754 Ga0501040_0002754_2321_4714 772
118 3300049578 Ga0501042_0001543 Ga0501042_0001543_11191_13584 772
119 3300049579 Ga0501043_0004354 Ga0501043_0004354_1099_3492 772
120 3300049580 Ga0501046_0003150 Ga0501046_0003150_5113_7506 772
121 3300049582 Ga0501048_0012503 Ga0501048_0012503_3152_5545 772
122 3300049584 Ga0501068_0000380 Ga0501068_0000380_9804_12197 772
123 3300049586 Ga0501070_0019980 Ga0501070_0019980_1150_3543 772
124 3300049587 Ga0501071_0001259 Ga0501071_0001259_7367_9760 772
125 3300049589 Ga0501073_0002723 Ga0501073_0002723_7927_10320 772
126 3300049590 Ga0501074_0004117 Ga0501074_0004117_1555_3948 772
127 3300049591 Ga0501075_0001942 Ga0501075_0001942_4605_6998 772
128 3300049592 Ga0501076_0020541 Ga0501076_0020541_2140_4533 772
129 3300049593 Ga0501077_0005598 Ga0501077_0005598_4421_6814 772
130 3300049741 Ga0501079_0013568 Ga0501079_0013568_1683_4076 772
131 3300049742 Ga0501080_0002477 Ga0501080_0002477_12937_15330 772
132 3300049744 Ga0501083_0001249 Ga0501083_0001249_3469_5862 772
133 3300049822 Ga0501035_0006713 Ga0501035_0006713_7969_10362 772
134 3300049824 Ga0501045_0000951 Ga0501045_0000951_10826_13219 772
135 3300054114 Ga0501084_0004444 Ga0501084_0004444_1028_3421 772
136 3300061734 Ga0530510_0024593 Ga0530510_0024593_1256_3649 772
137 3300005347 Ga0070668_100023788 Ga0070668_1000237883 773
138 3300005457 Ga0070662_100017013 Ga0070662_1000170133 773
139 3300009094 Ga0111539_10061218 Ga0111539_100612184 773
140 3300045976 Ga0466967_0004525 Ga0466967_0004525_3942_6440 773
141 3300050509 nmdc:mga0qj67_33530_c1 nmdc:mga0qj67_33530_c1_921_3356 773
142 3300048912 Ga0496109_0031827 Ga0496109_0031827_1735_4167 774
143 3300048914 Ga0496111_0029012 Ga0496111_0029012_1115_3547 774
144 3300048916 Ga0496113_0033519 Ga0496113_0033519_1102_3534 774
145 3300003373 JGI25407J50210_10006492 JGI25407J50210_100064921 776
146 3300005329 Ga0070683_100000499 Ga0070683_10000049919 776
147 3300005337 Ga0070682_100015459 Ga0070682_1000154593 776
148 3300005338 Ga0068868_100041168 Ga0068868_1000411682 776
149 3300005455 Ga0070663_100018945 Ga0070663_1000189454 776
150 3300005458 Ga0070681_10033109 Ga0070681_100331094 776
151 3300005530 Ga0070679_100003840 Ga0070679_1000038403 776
152 3300005535 Ga0070684_100004052 Ga0070684_1000040524 776
153 3300005547 Ga0070693_100001888 Ga0070693_1000018885 776
154 3300005614 Ga0068856_100069966 Ga0068856_1000699662 776
155 3300005937 Ga0081455_10041292 Ga0081455_100412922 776
156 3300005981 Ga0081538_10000053 Ga0081538_1000005354 776
157 3300025912 Ga0207707_10005126 Ga0207707_100051265 776
158 3300025921 Ga0207652_10007090 Ga0207652_100070903 776
159 3300025944 Ga0207661_10000408 Ga0207661_1000040814 776
160 3300026078 Ga0207702_10025524 Ga0207702_100255243 776
161 3300026121 Ga0207683_10001640 Ga0207683_1000164016 776
162 3300046543 Ga0495645_0000242 Ga0495645_0000242_19875_22355 776
163 3300005981 Ga0081538_10000553 Ga0081538_1000055324 777
164 3300049741 Ga0501079_0024309 Ga0501079_0024309_1618_4155 777
165 3300003373 JGI25407J50210_10000409 JGI25407J50210_100004095 778
166 3300005981 Ga0081538_10003278 Ga0081538_1000327811 778
167 3300003373 JGI25407J50210_10000166 JGI25407J50210_100001665 780
168 3300003373 JGI25407J50210_10000379 JGI25407J50210_100003795 780
169 3300005339 Ga0070660_100011780 Ga0070660_1000117802 780
170 3300005981 Ga0081538_10000027 Ga0081538_1000002739 780
171 3300006051 Ga0075364_10019344 Ga0075364_100193443 780
172 3300006846 Ga0075430_100030020 Ga0075430_1000300202 780
173 3300006880 Ga0075429_100045265 Ga0075429_1000452653 780
174 3300025919 Ga0207657_10003322 Ga0207657_1000332212 780
175 3300032126 Ga0307415_100010298 Ga0307415_1000102982 780
176 3300037418 Ga0395900_0018705 Ga0395900_0018705_1152_3536 780
177 3300037418 Ga0395900_0089228 Ga0395900_0089228_727_3126 780
178 3300038443 Ga0395901_0075495 Ga0395901_0075495_60_2459 780
179 3300049584 Ga0501068_0006983 Ga0501068_0006983_129_2510 780
180 3300005981 Ga0081538_10013197 Ga0081538_100131974 781
181 3300009094 Ga0111539_10083633 Ga0111539_100836331 781
182 3300009147 Ga0114129_10006693 Ga0114129_1000669317 781
183 3300013105 Ga0157369_10013040 Ga0157369_100130402 781
184 3300031995 Ga0307409_100057904 Ga0307409_1000579041 781
185 3300048905 Ga0496102_0000087 Ga0496102_0000087_85372_87777 781
186 3300048906 Ga0496103_0000016 Ga0496103_0000016_140650_143055 781
187 3300048909 Ga0496106_0001301 Ga0496106_0001301_9959_12379 781
188 3300048910 Ga0496107_0000655 Ga0496107_0000655_10169_12589 781
189 3300048915 Ga0496112_0046249 Ga0496112_0046249_1649_4030 781
190 3300048918 Ga0496115_0011489 Ga0496115_0011489_2844_5264 781
191 3300050507 nmdc:mga05p37_91124_c1 nmdc:mga05p37_91124_c1_686_3127 781
192 3300003373 JGI25407J50210_10001708 JGI25407J50210_100017082 782
193 3300003373 JGI25407J50210_10005149 JGI25407J50210_100051492 782
194 3300005441 Ga0070700_100016492 Ga0070700_1000164923 782
195 3300005535 Ga0070684_100020263 Ga0070684_1000202632 782
196 3300005577 Ga0068857_100054839 Ga0068857_1000548392 782
197 3300005937 Ga0081455_10003392 Ga0081455_1000339213 782
198 3300005937 Ga0081455_10007720 Ga0081455_100077203 782
199 3300005981 Ga0081538_10000013 Ga0081538_1000001375 782
200 3300005981 Ga0081538_10001157 Ga0081538_100011572 782
201 3300005981 Ga0081538_10001346 Ga0081538_1000134621 782
202 3300005981 Ga0081538_10001451 Ga0081538_100014518 782
203 3300005981 Ga0081538_10002475 Ga0081538_1000247510 782
204 3300005981 Ga0081538_10004600 Ga0081538_100046008 782
205 3300005981 Ga0081538_10004832 Ga0081538_1000483211 782
206 3300005981 Ga0081538_10007146 Ga0081538_100071463 782
207 3300005981 Ga0081538_10015866 Ga0081538_100158665 782
208 3300005981 Ga0081538_10023558 Ga0081538_100235582 782
209 3300006846 Ga0075430_100001679 Ga0075430_1000016798 782
210 3300006847 Ga0075431_100004010 Ga0075431_10000401010 782
211 3300025927 Ga0207687_10009805 Ga0207687_100098053 782
212 3300025961 Ga0207712_10030045 Ga0207712_100300453 782
213 3300026095 Ga0207676_10025239 Ga0207676_100252393 782
214 3300031824 Ga0307413_10029195 Ga0307413_100291952 782
215 3300031901 Ga0307406_10044081 Ga0307406_100440812 782
216 3300031911 Ga0307412_10011571 Ga0307412_100115712 782
217 3300032002 Ga0307416_100100747 Ga0307416_1001007471 782
218 3300037312 Ga0395899_0017090 Ga0395899_0017090_1940_4333 782
219 3300037418 Ga0395900_0017142 Ga0395900_0017142_2569_4995 782
220 3300037466 Ga0395898_0023076 Ga0395898_0023076_3827_6253 782
221 3300037466 Ga0395898_0032063 Ga0395898_0032063_1194_3587 782
222 3300037471 Ga0395905_0018299 Ga0395905_0018299_1339_3732 782
223 3300038443 Ga0395901_0008073 Ga0395901_0008073_1193_3586 782
224 3300038443 Ga0395901_0082976 Ga0395901_0082976_519_2945 782
225 3300039438 Ga0436360_1185552 Ga0436360_1185552_235_2622 782
226 3300046517 Ga0495630_0015339 Ga0495630_0015339_1856_4255 782
227 3300046535 Ga0495586_0001604 Ga0495586_0001604_9221_11620 782
228 3300046689 Ga0495613_0050364 Ga0495613_0050364_39_2438 782
229 3300048905 Ga0496102_0023766 Ga0496102_0023766_961_3354 782
230 3300050509 nmdc:mga0qj67_2636_c1 nmdc:mga0qj67_2636_c1_5552_8038 782
231 3300005937 Ga0081455_10006251 Ga0081455_100062513 783
232 3300005981 Ga0081538_10015769 Ga0081538_100157692 783
233 3300005981 Ga0081538_10018584 Ga0081538_100185843 783
234 3300005985 Ga0081539_10000095 Ga0081539_10000095141 783
235 3300003203 JGI25406J46586_10002385 JGI25406J46586_100023855 784
236 3300005434 Ga0070709_10037810 Ga0070709_100378101 784
237 3300005436 Ga0070713_100003556 Ga0070713_1000035562 784
238 3300005985 Ga0081539_10003675 Ga0081539_100036752 784
239 3300005985 Ga0081539_10006268 Ga0081539_100062685 784
240 3300025928 Ga0207700_10000039 Ga0207700_100000392 784
241 3300025929 Ga0207664_10023473 Ga0207664_100234734 784
242 3300028800 Ga0265338_10010751 Ga0265338_100107518 784
243 3300031251 Ga0265327_10020387 Ga0265327_100203872 784
244 3300031901 Ga0307406_10003462 Ga0307406_100034623 784
245 3300032002 Ga0307416_100001917 Ga0307416_1000019174 784
246 3300037312 Ga0395899_0030565 Ga0395899_0030565_562_2952 784
247 3300037418 Ga0395900_0031020 Ga0395900_0031020_2837_5227 784
248 3300037466 Ga0395898_0003232 Ga0395898_0003232_8319_10709 784
249 3300038443 Ga0395901_0012137 Ga0395901_0012137_3387_5777 784
250 3300042002 Ga0439442_002384 Ga0439442_002384_720_3110 784
251 3300042015 Ga0439462_0000415 Ga0439462_0000415_3391_5781 784
252 3300046463 Ga0495653_0030471 Ga0495653_0030471_1760_4237 784
253 3300046477 Ga0495664_0000051 Ga0495664_0000051_17954_20422 784
254 3300046514 Ga0495618_0000107 Ga0495618_0000107_56418_58895 784
255 3300046517 Ga0495630_0000180 Ga0495630_0000180_46224_48701 784
256 3300046543 Ga0495645_0000032 Ga0495645_0000032_43594_46071 784
257 3300046675 Ga0495657_0000016 Ga0495657_0000016_46277_48754 784
258 3300048903 Ga0496100_0003460 Ga0496100_0003460_4124_6595 784
259 3300048914 Ga0496111_0038135 Ga0496111_0038135_208_2598 784
260 3300048916 Ga0496113_0029373 Ga0496113_0029373_580_2970 784
261 3300048918 Ga0496115_0000051 Ga0496115_0000051_74783_77254 784
262 3300049574 Ga0501038_0067086 Ga0501038_0067086_110_2500 784
263 3300049576 Ga0501040_0019695 Ga0501040_0019695_466_2856 784
264 3300049578 Ga0501042_0013467 Ga0501042_0013467_1189_3579 784
265 3300049580 Ga0501046_0020388 Ga0501046_0020388_1112_3502 784
266 3300049582 Ga0501048_0015565 Ga0501048_0015565_3004_5394 784
267 3300049590 Ga0501074_0007210 Ga0501074_0007210_500_2890 784
268 3300049591 Ga0501075_0007095 Ga0501075_0007095_1624_4014 784
269 3300049592 Ga0501076_0007185 Ga0501076_0007185_3999_6389 784
270 3300049742 Ga0501080_0078460 Ga0501080_0078460_265_2655 784
271 3300049822 Ga0501035_0074539 Ga0501035_0074539_440_2830 784
272 3300060353 Ga0501082_0010518 Ga0501082_0010518_2550_4940 784
273 3300061734 Ga0530510_0001409 Ga0530510_0001409_446_2836 784

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00204

DNA_gyraseB

DNA gyrase B

264

436

0.97

PF00986

DNA_gyraseB_C

DNA gyrase B subunit, carboxyl terminus

768

830

0.97

PF01751

Toprim

Toprim domain

464

576

0.91

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

73

218

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pqm-assembly1.cif.gz_A acinetobacter baumannii dna gyrase b 23kda atpase subdomain complexed with ebl2888 0.9824 16 220
4bae-assembly1.cif.gz_B optimisation of pyrroleamides as mycobacterial gyrb atpase inhibitors: structure activity relationship and in vivo efficacy in the mouse model of tuberculosis 0.9796 16 220
7ptg-assembly2.cif.gz_B pseudomonas aeruginosa dna gyrase b 24kda atpase subdomain complexed with ebl2888 0.9782 18 220
7pqm-assembly1.cif.gz_A acinetobacter baumannii dna gyrase b 23kda atpase subdomain complexed with ebl2888 0.9771 16 220
7pql-assembly1.cif.gz_A acinetobacter baumannii dna gyrase b 23kda atpase subdomain complexed with ebl2704 0.9725 16 220
ID Description Score Start End Superfamily
3zkbF02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9883 222 389 3.30.230.10
af_Q2G274_231_403_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9725 222 394 3.30.230.10
4wudA02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9688 222 394 3.30.230.10
af_Q2G274_231_403_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.967 222 394 3.30.230.10
3zkbF02 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9655 222 389 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A2H5CM09-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9861 205 377 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-T1BV09-F1-model_v4 DNA gyrase subunit B 0.9837 392 534 GO:0003677
GO:0003918
GO:0005524
GO:0006265
AF-Q4PU99-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9825 173 294 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-A0A167L6K1-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9811 196 389 GO:0003677
GO:0005524
GO:0006265
GO:0034335
AF-A0A7C5GMC3-F1-model_v4 DNA topoisomerase (ATP-hydrolyzing) (EC 5.6.2.2) 0.9807 426 547 GO:0003677
GO:0005524
GO:0006265
GO:0016539
GO:0034335

Feature Viewer

pLDDT pTM Quality
85.16 0.51 Medium
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Predicted Structure (AlphaFold2)

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