F378730

General Info

Members Datasets Scaffolds Average Seq Length
272 193 544 282

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2896253425|2896253439
Length 330
Sequence YSTLGVSRSASEKDIKSAYRTLAKKLHPDRNKDNPQATERFGKVTQAYDLLSDKDKRAQFDRGEIDADGNPTSPFGHGGFGGGYGGGPRPGGPGGPGGGYASRGQQGFGGNAEEMDLSGLFEGLFGRGGNPRGGGPSGMGGNMGGGQQGFRRPPPPPQKGADIRYKLAVPFVDAATGAKQRITLNDGKTIDLSLPEGVEDGTTMRLKGKGQPGPRQNGDGIVVVDIQPHAFFYRDGNDVRLDLPISLDEAVNGAKVKVPTVDGAVMLTVAAGSSSGKVLRLKGKGFKAKGGKRGDQLVTLEIHLPDDVSELSEKLKGWSDSDNHRENMGG

Samples

Sample ID Description Type Environment
1 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
19 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
30 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
41 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
42 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
43 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
47 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
48 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
56 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
57 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
58 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
59 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
60 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
61 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
104 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
109 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
110 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
111 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
112 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
115 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
116 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
124 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
125 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
129 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
130 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
131 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
135 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
139 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
140 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
141 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
142 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
143 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
144 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
145 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
148 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
158 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
161 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
167 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
168 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
169 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
170 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
171 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
172 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
173 2896253425 Aurantiacibacter rhizosphaerae GH3-10 Isolate Rhizosphere
174 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
175 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
176 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
177 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
178 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
179 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
180 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
181 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
182 2773857925 Microvirga vignae BR3299 Isolate Unclassified
183 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
184 2842698319 Methylobacterium sp. R-72139 Isolate Unclassified
185 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
186 2884298095 Microvirga thermotolerans HR1 Isolate Rhizosphere
187 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
188 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
189 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
190 2909042592 Labrys sp. LIt4 Isolate Nodule
191 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
192 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
193 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.28
Metatranscriptomes 0
Isolates 7.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.94
Nodule 1.84
Rhizoplane 3.31
Rhizosphere 77.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24752J21851_1006950 3300001976 Bacteria 1479
2 JGI24740J21852_10004126 3300001979 Bacteria 6278
3 JGI24740J21852_10064048 3300001979 Bacteria 1005
4 JGI24739J22299_10020877 3300001989 Bacteria 2337
5 JGI24738J21930_10000334 3300002075 Bacteria 12870
6 Ga0065704_10000309 3300005289 Bacteria 58094
7 Ga0065715_10002487 3300005293 Bacteria 4956
8 Ga0065707_10082575 3300005295 Bacteria 13611
9 Ga0070658_10038160 3300005327 Bacteria 3874
10 Ga0070658_10200748 3300005327 Bacteria 1682
11 Ga0070683_100031029 3300005329 Bacteria 4856
12 Ga0070683_100103051 3300005329 Bacteria 2688
13 Ga0070670_100000068 3300005331 Bacteria 106494
14 Ga0070666_10017625 3300005335 Bacteria 4581
15 Ga0070680_100004912 3300005336 Bacteria 10062
16 Ga0070680_100166499 3300005336 Bacteria 1853
17 Ga0070660_100002159 3300005339 Bacteria 13554
18 Ga0070660_100168634 3300005339 Bacteria 1767
19 Ga0070661_100037056 3300005344 Bacteria 3547
20 Ga0070692_10040273 3300005345 Bacteria 2389
21 Ga0070668_100002343 3300005347 Bacteria 13923
22 Ga0070668_100019175 3300005347 Bacteria 5145
23 Ga0070668_100066486 3300005347 Bacteria 2798
24 Ga0070669_100000392 3300005353 Bacteria 33692
25 Ga0070669_100145658 3300005353 Bacteria 1830
26 Ga0070669_100351334 3300005353 Bacteria 1197
27 Ga0070675_100044281 3300005354 Bacteria 3639
28 Ga0070671_100000178 3300005355 Bacteria 42243
29 Ga0070671_100424303 3300005355 Bacteria 1139
30 Ga0070659_100024195 3300005366 Bacteria 4654
31 Ga0070659_100179210 3300005366 Bacteria 1738
32 Ga0070667_100001418 3300005367 Bacteria 21472
33 Ga0070667_100068304 3300005367 Bacteria 3024
34 Ga0070714_100451475 3300005435 Bacteria 1221
35 Ga0070705_100063347 3300005440 Bacteria 2205
36 Ga0070663_100007214 3300005455 Bacteria 6752
37 Ga0070663_100028255 3300005455 Bacteria 3817
38 Ga0070678_100122706 3300005456 Bacteria 2051
39 Ga0070678_100243776 3300005456 Bacteria 1504
40 Ga0070662_100129358 3300005457 Bacteria 1945
41 Ga0070662_100169035 3300005457 Bacteria 1716
42 Ga0070679_100005864 3300005530 Bacteria 11405
43 Ga0070679_100077767 3300005530 Bacteria 3307
44 Ga0070679_100535128 3300005530 Bacteria 1115
45 Ga0070679_100584322 3300005530 Bacteria 1060
46 Ga0070684_100193882 3300005535 Bacteria 1849
47 Ga0070684_100312051 3300005535 Bacteria 1444
48 Ga0070697_100031655 3300005536 Bacteria 4256
49 Ga0070695_100008338 3300005545 Bacteria 6146
50 Ga0070665_100003186 3300005548 Bacteria 17653
51 Ga0070704_100006005 3300005549 Bacteria 7122
52 Ga0068855_100008285 3300005563 Bacteria 12565
53 Ga0068855_100021120 3300005563 Bacteria 7806
54 Ga0068855_100053710 3300005563 Bacteria 4739
55 Ga0068855_100131658 3300005563 Bacteria 2856
56 Ga0070664_100273942 3300005564 Bacteria 1521
57 Ga0068857_100150585 3300005577 Bacteria 2107
58 Ga0068856_100096165 3300005614 Bacteria 2950
59 Ga0068864_100000019 3300005618 Bacteria 271650
60 Ga0068863_100000015 3300005841 Bacteria 214824
61 Ga0068860_100091733 3300005843 Bacteria 2894
62 Ga0068862_100000094 3300005844 Bacteria 106159
63 Ga0068862_100024738 3300005844 Bacteria 5039
64 Ga0081455_10002027 3300005937 Bacteria 24230
65 Ga0075367_10019282 3300006178 Bacteria 3781
66 Ga0075369_10005885 3300006186 Bacteria 4608
67 Ga0075434_100622625 3300006871 Bacteria 1098
68 Ga0075436_100000751 3300006914 Bacteria 21452
69 Ga0079104_1014479 3300006946 Bacteria 2377
70 Ga0105251_10000241 3300009011 Bacteria 54940
71 Ga0105250_10013706 3300009092 Bacteria 3340
72 Ga0111539_10096599 3300009094 Bacteria 3471
73 Ga0105247_10195775 3300009101 Bacteria 1355
74 Ga0105248_10000311 3300009177 Bacteria 57870
75 Ga0105248_10025550 3300009177 Bacteria 6566
76 Ga0105248_10039103 3300009177 Bacteria 5312
77 Ga0105238_10094293 3300009551 Bacteria 2981
78 Ga0105249_10001265 3300009553 Bacteria 22155
79 Ga0105249_10007183 3300009553 Bacteria 9729
80 Ga0105246_10000017 3300011119 Bacteria 65095
81 Ga0157373_10002683 3300013100 Bacteria 13484
82 Ga0157371_10041121 3300013102 Bacteria 3300
83 Ga0157370_10052686 3300013104 Bacteria 3884
84 Ga0157369_10001885 3300013105 Bacteria 25291
85 Ga0157369_10119501 3300013105 Bacteria 2797
86 Ga0157378_10065096 3300013297 Bacteria 3262
87 Ga0163162_10017823 3300013306 Bacteria 6948
88 Ga0163162_10053202 3300013306 Bacteria 4069
89 Ga0157372_10042851 3300013307 Bacteria 5009
90 Ga0157375_10288619 3300013308 Bacteria 1804
91 Ga0163163_10021751 3300014325 Bacteria 6058
92 Ga0157380_10001316 3300014326 Bacteria 16117
93 Ga0157380_10005178 3300014326 Bacteria 9117
94 Ga0157380_10042843 3300014326 Bacteria 3541
95 Ga0209025_1036297 3300025294 Bacteria 2210
96 Ga0207697_10022572 3300025315 Bacteria 2578
97 Ga0207696_1002060 3300025711 Bacteria 10149
98 Ga0207713_1019206 3300025735 Bacteria 3354
99 Ga0207647_10022617 3300025904 Bacteria 4172
100 Ga0207643_10284620 3300025908 Bacteria 1026
101 Ga0207705_10003644 3300025909 Bacteria 11732
102 Ga0207707_10070434 3300025912 Bacteria 3047
103 Ga0207695_10001079 3300025913 Bacteria 47666
104 Ga0207671_10000824 3300025914 Bacteria 39313
105 Ga0207660_10006661 3300025917 Bacteria 7491
106 Ga0207657_10005020 3300025919 Bacteria 13887
107 Ga0207657_10075243 3300025919 Bacteria 2850
108 Ga0207657_10115794 3300025919 Bacteria 2209
109 Ga0207652_10000338 3300025921 Bacteria 48779
110 Ga0207652_10013403 3300025921 Bacteria 6635
111 Ga0207652_10283478 3300025921 Bacteria 1495
112 Ga0207681_10005508 3300025923 Bacteria 7775
113 Ga0207681_10018613 3300025923 Bacteria 4377
114 Ga0207694_10005393 3300025924 Bacteria 9841
115 Ga0207694_10179645 3300025924 Bacteria 1716
116 Ga0207650_10000452 3300025925 Bacteria 34879
117 Ga0207664_10582613 3300025929 Bacteria 1004
118 Ga0207644_10001227 3300025931 Bacteria 16516
119 Ga0207690_10026410 3300025932 Bacteria 3657
120 Ga0207706_10005767 3300025933 Bacteria 11521
121 Ga0207706_10046336 3300025933 Bacteria 3850
122 Ga0207706_10056046 3300025933 Bacteria 3475
123 Ga0207706_10070559 3300025933 Bacteria 3073
124 Ga0207711_10000017 3300025941 Bacteria 441730
125 Ga0207711_10070851 3300025941 Bacteria 3023
126 Ga0207661_10019366 3300025944 Bacteria 5073
127 Ga0207679_10056215 3300025945 Bacteria 2904
128 Ga0207679_10263118 3300025945 Bacteria 1472
129 Ga0207667_10015042 3300025949 Bacteria 8802
130 Ga0207667_10045929 3300025949 Bacteria 4624
131 Ga0207667_10114727 3300025949 Bacteria 2777
132 Ga0207712_10000113 3300025961 Bacteria 88030
133 Ga0207712_10043348 3300025961 Bacteria 3103
134 Ga0207668_10000394 3300025972 Bacteria 27693
135 Ga0207668_10003121 3300025972 Bacteria 9705
136 Ga0207668_10006422 3300025972 Bacteria 6947
137 Ga0207640_10014724 3300025981 Bacteria 4508
138 Ga0207640_10049231 3300025981 Bacteria 2727
139 Ga0207658_10000610 3300025986 Bacteria 31714
140 Ga0207639_10179488 3300026041 Bacteria 1800
141 Ga0207678_10025388 3300026067 Bacteria 5173
142 Ga0207678_10041834 3300026067 Bacteria 3972
143 Ga0207702_10005558 3300026078 Bacteria 11009
144 Ga0207702_10061538 3300026078 Bacteria 3202
145 Ga0207641_10000008 3300026088 Bacteria 424415
146 Ga0207676_10000019 3300026095 Bacteria 305653
147 Ga0207674_10009512 3300026116 Bacteria 11097
148 Ga0207674_10022927 3300026116 Bacteria 6698
149 Ga0207674_10075489 3300026116 Bacteria 3380
150 Ga0209281_1009711 3300027111 Bacteria 2240
151 Ga0268266_10000642 3300028379 Bacteria 47516
152 Ga0268265_10000011 3300028380 Bacteria 343832
153 Ga0268265_10115982 3300028380 Bacteria 2196
154 Ga0268264_10003880 3300028381 Bacteria 12823
155 Ga0316576_10051210 3300031727 Bacteria 3005
156 Ga0316578_10025697 3300031728 Bacteria 3314
157 Ga0307406_10108743 3300031901 Bacteria 1904
158 Ga0307407_10285574 3300031903 Bacteria 1145
159 Ga0307409_100105049 3300031995 Bacteria 2354
160 Ga0307414_10020972 3300032004 Bacteria 4086
161 Ga0316584_0010581 3300036712 Bacteria 6454
162 Ga0395899_0003919 3300037312 Bacteria 11735
163 Ga0395900_0055821 3300037418 Bacteria 4066
164 Ga0395898_0004667 3300037466 Bacteria 14931
165 Ga0395901_0007257 3300038443 Bacteria 11183
166 Ga0466965_0068113 3300044683 Bacteria 1787
167 Ga0466964_0041367 3300044706 Bacteria 1864
168 Ga0466968_0004663 3300044735 Bacteria 5131
169 Ga0466957_0043486 3300044842 Bacteria 2720
170 Ga0466960_0019074 3300044901 Bacteria 3016
171 Ga0451576_0000024 3300045051 Bacteria 470499
172 Ga0495638_0016979 3300046460 Bacteria 4866
173 Ga0495583_0000139 3300046506 Bacteria 123464
174 Ga0495606_0019810 3300046507 Bacteria 4984
175 Ga0495616_0112891 3300046513 Bacteria 1261
176 Ga0495663_0002039 3300046525 Bacteria 6189
177 Ga0495663_0005276 3300046525 Bacteria 3596
178 Ga0495654_0001019 3300046530 Bacteria 20521
179 Ga0495668_0016184 3300046616 Bacteria 4337
180 Ga0495670_0006326 3300046691 Bacteria 5816
181 Ga0495670_0007075 3300046691 Bacteria 5524
182 Ga0495677_0033547 3300047445 Bacteria 1871
183 Ga0495673_0009289 3300047469 Bacteria 5452
184 Ga0495686_0000182 3300047472 Bacteria 119682
185 Ga0495686_0011099 3300047472 Bacteria 6363
186 Ga0496100_0103636 3300048903 Bacteria 1964
187 Ga0496102_0000117 3300048905 Bacteria 114037
188 Ga0496102_0001738 3300048905 Bacteria 19071
189 Ga0496103_0000076 3300048906 Bacteria 113209
190 Ga0496103_0000456 3300048906 Bacteria 34766
191 Ga0496103_0197593 3300048906 Bacteria 1293
192 Ga0496104_0006257 3300048907 Bacteria 10461
193 Ga0496105_0033507 3300048908 Bacteria 4218
194 Ga0496113_0001439 3300048916 Bacteria 13222
195 Ga0496116_0000888 3300048919 Bacteria 37285
196 Ga0496116_0002697 3300048919 Bacteria 18306
197 Ga0496117_0000201 3300048920 Bacteria 117679
198 Ga0496117_0001772 3300048920 Bacteria 29619
199 Ga0496117_0025763 3300048920 Bacteria 4614
200 Ga0496117_0047936 3300048920 Bacteria 3058
201 Ga0496118_0000097 3300048921 Bacteria 160837
202 Ga0496118_0007988 3300048921 Bacteria 11059
203 Ga0496118_0012059 3300048921 Bacteria 8344
204 Ga0496118_0016701 3300048921 Bacteria 6721
205 Ga0496119_0002278 3300048922 Bacteria 21258
206 Ga0496119_0016566 3300048922 Bacteria 5599
207 Ga0496119_0019764 3300048922 Bacteria 4941
208 Ga0496120_0048784 3300048923 Bacteria 2434
209 Ga0496121_0008063 3300048924 Bacteria 12550
210 Ga0496121_0155138 3300048924 Bacteria 1681
211 Ga0496122_0002395 3300048925 Bacteria 26758
212 Ga0496122_0013466 3300048925 Bacteria 8002
213 Ga0496123_0001113 3300048926 Bacteria 40258
214 Ga0496123_0053412 3300048926 Bacteria 2670
215 Ga0496123_0059080 3300048926 Bacteria 2482
216 Ga0496124_0000202 3300048927 Bacteria 117650
217 Ga0496124_0001703 3300048927 Bacteria 31097
218 Ga0496124_0051295 3300048927 Bacteria 3511
219 Ga0496124_0208415 3300048927 Bacteria 1481
220 Ga0496126_0002167 3300048929 Bacteria 27302
221 Ga0495682_0008956 3300049460 Bacteria 3926
222 Ga0501031_0033708 3300049568 Bacteria 3342
223 Ga0501033_0066687 3300049570 Bacteria 2647
224 Ga0501033_0301838 3300049570 Bacteria 1127
225 Ga0501034_0110526 3300049571 Bacteria 2739
226 Ga0501036_0005344 3300049572 Bacteria 10398
227 Ga0501036_0024001 3300049572 Bacteria 5140
228 Ga0501038_0005794 3300049574 Bacteria 11444
229 Ga0501039_0274775 3300049575 Bacteria 1324
230 Ga0501043_0228336 3300049579 Bacteria 1438
231 Ga0501046_0057085 3300049580 Bacteria 3063
232 Ga0501046_0268598 3300049580 Bacteria 1251
233 Ga0501047_0181614 3300049581 Bacteria 1970
234 Ga0501067_0038864 3300049583 Bacteria 2642
235 Ga0501073_0106213 3300049589 Bacteria 1948
236 Ga0501079_0094184 3300049741 Bacteria 2321
237 Ga0501079_0378621 3300049741 Bacteria 1110
238 Ga0501080_0277708 3300049742 Bacteria 1523
239 Ga0501044_0004827 3300049823 Bacteria 15077
240 Ga0501045_0025760 3300049824 Bacteria 4228
241 nmdc:mga06r32_19835_c1 3300050510 Bacteria 6178
242 nmdc:mga08y16_30673_c1 3300050511 Bacteria 5655
243 nmdc:mga08x19_22_c1 3300050514 Bacteria 297462
244 nmdc:mga0sz30_58446_c1 3300050516 Bacteria 1644
245 Ga0500555_000188 3300053103 Bacteria 28317
246 Ga0500556_0000309 3300053104 Bacteria 37060
247 Ga0500616_0070703 3300053153 Bacteria 1781
248 Ga0500627_0001688 3300053158 Bacteria 6248
249 Ga0501084_0221319 3300054114 Bacteria 1597
250 Ga0501082_0084249 3300060353 Bacteria 2742
251 Ga0501082_0135489 3300060353 Bacteria 2137
252 2896253439 2896253425 Bacteria 3418029
253 2509080207 2508501114 Bacteria 7082538
254 2738710600 2738541275 Bacteria 4830863
255 2738747583 2738541281 Bacteria 5112672
256 2738849025 2738541301 Bacteria 4834102
257 2738864754 2738541304 Bacteria 4833665
258 2739297272 2738543022 Bacteria 4835059
259 2739356819 2738543032 Bacteria 5115625
260 2739358950 2738543033 Bacteria 4833336
261 2774870470 2773857925 Bacteria 6472445
262 2835316229 2835312727 Bacteria 7413381
263 2842702818 2842698319 Bacteria 5190321
264 2882456870 2882456835 Bacteria 6863978
265 2884299407 2884298095 Bacteria 3823049
266 2889308257 2889306138 Bacteria 6358934
267 2895889650 2895880812 Bacteria 11255272
268 2902409064 2902405164 Bacteria 6784948
269 2909045206 2909042592 Bacteria 6499737
270 2928100698 2928100450 Bacteria 4837635
271 2928960761 2928959182 Bacteria 4725774
272 2939669831 2939669807 Bacteria 5028511
273 JGI24752J21851_1006950
274 JGI24740J21852_10004126
275 JGI24740J21852_10064048
276 JGI24739J22299_10020877
277 JGI24738J21930_10000334
278 Ga0065704_10000309
279 Ga0065715_10002487
280 Ga0065707_10082575
281 Ga0070658_10038160
282 Ga0070658_10200748
283 Ga0070683_100031029
284 Ga0070683_100103051
285 Ga0070670_100000068
286 Ga0070666_10017625
287 Ga0070680_100004912
288 Ga0070680_100166499
289 Ga0070660_100002159
290 Ga0070660_100168634
291 Ga0070661_100037056
292 Ga0070692_10040273
293 Ga0070668_100002343
294 Ga0070668_100019175
295 Ga0070668_100066486
296 Ga0070669_100000392
297 Ga0070669_100145658
298 Ga0070669_100351334
299 Ga0070675_100044281
300 Ga0070671_100000178
301 Ga0070671_100424303
302 Ga0070659_100024195
303 Ga0070659_100179210
304 Ga0070667_100001418
305 Ga0070667_100068304
306 Ga0070714_100451475
307 Ga0070705_100063347
308 Ga0070663_100007214
309 Ga0070663_100028255
310 Ga0070678_100122706
311 Ga0070678_100243776
312 Ga0070662_100129358
313 Ga0070662_100169035
314 Ga0070679_100005864
315 Ga0070679_100077767
316 Ga0070679_100535128
317 Ga0070679_100584322
318 Ga0070684_100193882
319 Ga0070684_100312051
320 Ga0070697_100031655
321 Ga0070695_100008338
322 Ga0070665_100003186
323 Ga0070704_100006005
324 Ga0068855_100008285
325 Ga0068855_100021120
326 Ga0068855_100053710
327 Ga0068855_100131658
328 Ga0070664_100273942
329 Ga0068857_100150585
330 Ga0068856_100096165
331 Ga0068864_100000019
332 Ga0068863_100000015
333 Ga0068860_100091733
334 Ga0068862_100000094
335 Ga0068862_100024738
336 Ga0081455_10002027
337 Ga0075367_10019282
338 Ga0075369_10005885
339 Ga0075434_100622625
340 Ga0075436_100000751
341 Ga0079104_1014479
342 Ga0105251_10000241
343 Ga0105250_10013706
344 Ga0111539_10096599
345 Ga0105247_10195775
346 Ga0105248_10000311
347 Ga0105248_10025550
348 Ga0105248_10039103
349 Ga0105238_10094293
350 Ga0105249_10001265
351 Ga0105249_10007183
352 Ga0105246_10000017
353 Ga0157373_10002683
354 Ga0157371_10041121
355 Ga0157370_10052686
356 Ga0157369_10001885
357 Ga0157369_10119501
358 Ga0157378_10065096
359 Ga0163162_10017823
360 Ga0163162_10053202
361 Ga0157372_10042851
362 Ga0157375_10288619
363 Ga0163163_10021751
364 Ga0157380_10001316
365 Ga0157380_10005178
366 Ga0157380_10042843
367 Ga0209025_1036297
368 Ga0207697_10022572
369 Ga0207696_1002060
370 Ga0207713_1019206
371 Ga0207647_10022617
372 Ga0207643_10284620
373 Ga0207705_10003644
374 Ga0207707_10070434
375 Ga0207695_10001079
376 Ga0207671_10000824
377 Ga0207660_10006661
378 Ga0207657_10005020
379 Ga0207657_10075243
380 Ga0207657_10115794
381 Ga0207652_10000338
382 Ga0207652_10013403
383 Ga0207652_10283478
384 Ga0207681_10005508
385 Ga0207681_10018613
386 Ga0207694_10005393
387 Ga0207694_10179645
388 Ga0207650_10000452
389 Ga0207664_10582613
390 Ga0207644_10001227
391 Ga0207690_10026410
392 Ga0207706_10005767
393 Ga0207706_10046336
394 Ga0207706_10056046
395 Ga0207706_10070559
396 Ga0207711_10000017
397 Ga0207711_10070851
398 Ga0207661_10019366
399 Ga0207679_10056215
400 Ga0207679_10263118
401 Ga0207667_10015042
402 Ga0207667_10045929
403 Ga0207667_10114727
404 Ga0207712_10000113
405 Ga0207712_10043348
406 Ga0207668_10000394
407 Ga0207668_10003121
408 Ga0207668_10006422
409 Ga0207640_10014724
410 Ga0207640_10049231
411 Ga0207658_10000610
412 Ga0207639_10179488
413 Ga0207678_10025388
414 Ga0207678_10041834
415 Ga0207702_10005558
416 Ga0207702_10061538
417 Ga0207641_10000008
418 Ga0207676_10000019
419 Ga0207674_10009512
420 Ga0207674_10022927
421 Ga0207674_10075489
422 Ga0209281_1009711
423 Ga0268266_10000642
424 Ga0268265_10000011
425 Ga0268265_10115982
426 Ga0268264_10003880
427 Ga0316576_10051210
428 Ga0316578_10025697
429 Ga0307406_10108743
430 Ga0307407_10285574
431 Ga0307409_100105049
432 Ga0307414_10020972
433 Ga0316584_0010581
434 Ga0395899_0003919
435 Ga0395900_0055821
436 Ga0395898_0004667
437 Ga0395901_0007257
438 Ga0466965_0068113
439 Ga0466964_0041367
440 Ga0466968_0004663
441 Ga0466957_0043486
442 Ga0466960_0019074
443 Ga0451576_0000024
444 Ga0495638_0016979
445 Ga0495583_0000139
446 Ga0495606_0019810
447 Ga0495616_0112891
448 Ga0495663_0002039
449 Ga0495663_0005276
450 Ga0495654_0001019
451 Ga0495668_0016184
452 Ga0495670_0006326
453 Ga0495670_0007075
454 Ga0495677_0033547
455 Ga0495673_0009289
456 Ga0495686_0000182
457 Ga0495686_0011099
458 Ga0496100_0103636
459 Ga0496102_0000117
460 Ga0496102_0001738
461 Ga0496103_0000076
462 Ga0496103_0000456
463 Ga0496103_0197593
464 Ga0496104_0006257
465 Ga0496105_0033507
466 Ga0496113_0001439
467 Ga0496116_0000888
468 Ga0496116_0002697
469 Ga0496117_0000201
470 Ga0496117_0001772
471 Ga0496117_0025763
472 Ga0496117_0047936
473 Ga0496118_0000097
474 Ga0496118_0007988
475 Ga0496118_0012059
476 Ga0496118_0016701
477 Ga0496119_0002278
478 Ga0496119_0016566
479 Ga0496119_0019764
480 Ga0496120_0048784
481 Ga0496121_0008063
482 Ga0496121_0155138
483 Ga0496122_0002395
484 Ga0496122_0013466
485 Ga0496123_0001113
486 Ga0496123_0053412
487 Ga0496123_0059080
488 Ga0496124_0000202
489 Ga0496124_0001703
490 Ga0496124_0051295
491 Ga0496124_0208415
492 Ga0496126_0002167
493 Ga0495682_0008956
494 Ga0501031_0033708
495 Ga0501033_0066687
496 Ga0501033_0301838
497 Ga0501034_0110526
498 Ga0501036_0005344
499 Ga0501036_0024001
500 Ga0501038_0005794
501 Ga0501039_0274775
502 Ga0501043_0228336
503 Ga0501046_0057085
504 Ga0501046_0268598
505 Ga0501047_0181614
506 Ga0501067_0038864
507 Ga0501073_0106213
508 Ga0501079_0094184
509 Ga0501079_0378621
510 Ga0501080_0277708
511 Ga0501044_0004827
512 Ga0501045_0025760
513 nmdc:mga06r32_19835_c1
514 nmdc:mga08y16_30673_c1
515 nmdc:mga08x19_22_c1
516 nmdc:mga0sz30_58446_c1
517 Ga0500555_000188
518 Ga0500556_0000309
519 Ga0500616_0070703
520 Ga0500627_0001688
521 Ga0501084_0221319
522 Ga0501082_0084249
523 Ga0501082_0135489
524 2896253439
525 2509080207
526 2738710600
527 2738747583
528 2738849025
529 2738864754
530 2739297272
531 2739356819
532 2739358950
533 2774870470
534 2835316229
535 2842702818
536 2882456870
537 2884299407
538 2889308257
539 2895889650
540 2902409064
541 2909045206
542 2928100698
543 2928960761
544 2939669831

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00226

DnaJ

DnaJ domain

1

61

0.99

PF01556

DnaJ_C

DnaJ C terminal domain

163

305

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3apq-assembly2.cif.gz_B crystal structure of j-trx1 fragment of erdj5 0.9696 1 66
2dn9-assembly1.cif.gz_A solution structure of j-domain from the dnaj homolog, human tid1 protein 0.9684 1 67
7jtk-assembly1.cif.gz_y radial spoke 1 isolated from chlamydomonas reinhardtii 0.9637 3 66
8fe2-assembly2.cif.gz_B structure of j-pkac chimera complexed with aplithianine a 0.9573 3 67
8glv-assembly1.cif.gz_KA 96-nm repeat unit of doublet microtubules from chlamydomonas reinhardtii flagella 0.9563 3 66
ID Description Score Start End Superfamily
af_D3ZD82_4_109_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 1.003 3 66 1.10.287.110
af_P46997_4_92_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9959 2 67 1.10.287.110
af_A0A1D6G5P4_68_170_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9915 3 67 1.10.287.110
af_Q54GP6_1_104_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9907 3 67 1.10.287.110
af_I1NG96_25_126_1.10.287.110 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;DnaJ domain 0.9896 2 67 1.10.287.110
ID Description Score Start End GO Terms
AF-A0A2E1Z000-F1-model_v4 deleted 0.9861 1 77
AF-A0A2E1Z000-F1-model_v4 deleted 0.9736 1 77
AF-A0A2K8Z9G0-F1-model_v4 J domain-containing protein 0.9696 1 67 GO:0016020
AF-A0A7S3GH81-F1-model_v4 J domain-containing protein 0.9535 1 66 GO:0005634
GO:0005737
GO:0044183
GO:0051082
GO:0051087
GO:0061077
AF-A0A7R9VNI0-F1-model_v4 J domain-containing protein 0.9471 1 71

Map