F378386

General Info

Members Datasets Scaffolds Average Seq Length
272 178 544 235

Family's Representative Sequence

Representative Sequence 3300022732|Ga0224569_100309|Ga0224569_1003095
Length 284
Sequence LTSGFCGEFLANLVISLEPRGWGYPGRESDAYAYAKETIRTNPRKFISMRNSQAADDPRWLTILNREVIACTRCPRLVAYREQVAREKRRAYRDHDYWGKPVPGFGDPEARVLIMGLAPGAHGSNRTGRPFTGDASGKFMFPVLYETGFASQPNATDRNDGLKLKDLYITAAARCAPPANKPTPQELANCAPFLNREIEGLGKIKVVVALGKIGFDAYLNYVKRQGLLPSRQAYLFKHGASYRLPDSKVLLASYHPSNQNTQTGKLTREMFVKIFKEAARLADE

Samples

Sample ID Description Type Environment
1 3300022732 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU1 Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
34 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
50 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
62 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
66 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
67 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
84 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
85 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
86 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
87 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
88 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
133 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
134 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
135 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
136 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
137 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
138 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
139 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
140 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
141 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
142 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
143 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
144 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
145 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
146 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
147 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
148 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
149 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
150 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
151 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
152 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
153 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
154 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
155 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
156 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
157 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
158 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
159 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
160 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
176 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
177 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
178 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.53
Metatranscriptomes 1.47
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.1
Nodule 0
Rhizoplane 5.51
Rhizosphere 91.91
Stem 0
Stem Tuber 0
Unclassified 12.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0224569_100309 3300022732 Bacteria 4108
2 LJNas_1001427 3300000546 Bacteria 3422
3 Ga0065715_10434590 3300005293 Bacteria 843
4 Ga0070683_100006156 3300005329 Bacteria 10061
5 Ga0070670_100000860 3300005331 Bacteria 23814
6 Ga0070670_100186363 3300005331 Unclassified 1802
7 Ga0068869_100024223 3300005334 Bacteria 4203
8 Ga0070680_100139236 3300005336 Bacteria 2034
9 Ga0070682_100049284 3300005337 Bacteria 2625
10 Ga0068868_100002219 3300005338 Bacteria 13418
11 Ga0068868_100005046 3300005338 Bacteria 9270
12 Ga0070687_100015258 3300005343 Bacteria 3469
13 Ga0070661_100084892 3300005344 Bacteria 2339
14 Ga0070661_100122268 3300005344 Bacteria 1950
15 Ga0070671_100264457 3300005355 Bacteria 1462
16 Ga0070674_100240842 3300005356 Bacteria 1416
17 Ga0070673_100432522 3300005364 Bacteria 1181
18 Ga0070688_100267494 3300005365 Bacteria 1223
19 Ga0070709_10052121 3300005434 Bacteria 2570
20 Ga0070709_10198307 3300005434 Unclassified 1420
21 Ga0070714_100146644 3300005435 Bacteria 2123
22 Ga0070714_100204104 3300005435 Bacteria 1809
23 Ga0070713_100104250 3300005436 Bacteria 2462
24 Ga0070713_100109984 3300005436 Bacteria 2401
25 Ga0070713_100163224 3300005436 Bacteria 1990
26 Ga0070711_100002012 3300005439 Bacteria 11443
27 Ga0070711_100146920 3300005439 Bacteria 1774
28 Ga0070708_100001838 3300005445 Bacteria 16278
29 Ga0070708_100008554 3300005445 Bacteria 8224
30 Ga0070708_100042018 3300005445 Bacteria 4010
31 Ga0070708_100070301 3300005445 Bacteria 3149
32 Ga0070663_100017223 3300005455 Bacteria 4711
33 Ga0070681_10010583 3300005458 Bacteria 9112
34 Ga0070681_10161152 3300005458 Bacteria 2167
35 Ga0068867_100008862 3300005459 Bacteria 7097
36 Ga0070685_10229982 3300005466 Bacteria 1219
37 Ga0070706_100006876 3300005467 Bacteria 10737
38 Ga0070706_100063847 3300005467 Bacteria 3403
39 Ga0070707_100000816 3300005468 Bacteria 30839
40 Ga0070707_100116740 3300005468 Bacteria 2590
41 Ga0070698_100001667 3300005471 Bacteria 24784
42 Ga0070698_100113238 3300005471 Bacteria 2678
43 Ga0070698_100652799 3300005471 Bacteria 993
44 Ga0070699_100001000 3300005518 Bacteria 26291
45 Ga0070699_100005599 3300005518 Bacteria 11019
46 Ga0070679_100083845 3300005530 Bacteria 3175
47 Ga0070679_100087976 3300005530 Bacteria 3094
48 Ga0070684_100008973 3300005535 Bacteria 7855
49 Ga0070684_100026388 3300005535 Bacteria 4893
50 Ga0070697_100000489 3300005536 Bacteria 30178
51 Ga0070697_100001374 3300005536 Bacteria 18443
52 Ga0070697_100019511 3300005536 Bacteria 5356
53 Ga0070697_100461272 3300005536 Unclassified 1107
54 Ga0068853_100087206 3300005539 Bacteria 2738
55 Ga0070686_100008337 3300005544 Bacteria 5802
56 Ga0070664_100012318 3300005564 Bacteria 6949
57 Ga0068857_100007205 3300005577 Bacteria 9575
58 Ga0068854_100034055 3300005578 Bacteria 3555
59 Ga0068854_100221648 3300005578 Bacteria 1497
60 Ga0068856_100001368 3300005614 Bacteria 25658
61 Ga0068856_100036305 3300005614 Bacteria 4832
62 Ga0068852_100067594 3300005616 Bacteria 3125
63 Ga0068852_100789831 3300005616 Bacteria 963
64 Ga0068859_100100448 3300005617 Bacteria 2949
65 Ga0068864_100000444 3300005618 Bacteria 35768
66 Ga0068866_10004077 3300005718 Bacteria 5994
67 Ga0068861_100157722 3300005719 Bacteria 1869
68 Ga0068851_10009762 3300005834 Bacteria 4470
69 Ga0068870_10052456 3300005840 Bacteria 2162
70 Ga0068863_100065794 3300005841 Bacteria 3430
71 Ga0068858_100004255 3300005842 Bacteria 14075
72 Ga0068860_100059358 3300005843 Bacteria 3637
73 Ga0068862_100030281 3300005844 Bacteria 4560
74 Ga0068862_100781682 3300005844 Bacteria 931
75 Ga0081538_10003524 3300005981 Bacteria 14738
76 Ga0070717_10015783 3300006028 Bacteria 5838
77 Ga0070717_10068286 3300006028 Bacteria 2959
78 Ga0070717_10160985 3300006028 Bacteria 1947
79 Ga0070715_10034559 3300006163 Bacteria 2073
80 Ga0070716_100003969 3300006173 Bacteria 7022
81 Ga0070716_100296997 3300006173 Bacteria 1122
82 Ga0070712_100002267 3300006175 Bacteria 11842
83 Ga0070712_100005560 3300006175 Bacteria 7801
84 Ga0070712_100070197 3300006175 Unclassified 2502
85 Ga0070712_100321000 3300006175 Bacteria 1259
86 Ga0097621_100057017 3300006237 Bacteria 3193
87 Ga0068871_100074035 3300006358 Bacteria 2809
88 Ga0068871_100261937 3300006358 Bacteria 1508
89 Ga0075433_10000499 3300006852 Bacteria 25613
90 Ga0075434_100000053 3300006871 Bacteria 56307
91 Ga0068865_100021063 3300006881 Bacteria 4237
92 Ga0075436_100001076 3300006914 Bacteria 18386
93 Ga0075436_100027765 3300006914 Bacteria 3896
94 Ga0075436_100238287 3300006914 Bacteria 1293
95 Ga0097620_100100442 3300006931 Bacteria 2949
96 Ga0075435_100000433 3300007076 Bacteria 25628
97 Ga0075435_100302485 3300007076 Bacteria 1368
98 Ga0105240_10095876 3300009093 Bacteria 3616
99 Ga0105240_10510336 3300009093 Bacteria 1336
100 Ga0105243_10294923 3300009148 Bacteria 1467
101 Ga0105241_10057333 3300009174 Bacteria 2988
102 Ga0105241_10323556 3300009174 Bacteria 1331
103 Ga0105248_10000006 3300009177 Bacteria 595060
104 Ga0105248_10038569 3300009177 Bacteria 5347
105 Ga0105237_10738758 3300009545 Unclassified 991
106 Ga0105238_10100636 3300009551 Bacteria 2873
107 Ga0105238_10391850 3300009551 Unclassified 1381
108 Ga0105249_10013638 3300009553 Bacteria 7176
109 Ga0105239_10018047 3300010375 Bacteria 7805
110 Ga0105246_10031483 3300011119 Bacteria 3511
111 Ga0105246_10060447 3300011119 Bacteria 2633
112 Ga0105246_10149745 3300011119 Unclassified 1765
113 Ga0157373_10040158 3300013100 Bacteria 3349
114 Ga0157373_10097236 3300013100 Bacteria 2072
115 Ga0157373_10126667 3300013100 Bacteria 1796
116 Ga0157371_10027916 3300013102 Bacteria 4090
117 Ga0157371_10039090 3300013102 Unclassified 3394
118 Ga0157370_10153501 3300013104 Bacteria 2142
119 Ga0157369_10028543 3300013105 Bacteria 6175
120 Ga0157369_10093603 3300013105 Bacteria 3207
121 Ga0157374_10000662 3300013296 Bacteria 30289
122 Ga0157374_10023337 3300013296 Bacteria 5532
123 Ga0157374_10052383 3300013296 Unclassified 3801
124 Ga0157374_10297530 3300013296 Bacteria 1596
125 Ga0157378_10000416 3300013297 Bacteria 41949
126 Ga0157378_10042426 3300013297 Bacteria 4038
127 Ga0163162_10008714 3300013306 Bacteria 9869
128 Ga0157372_10005074 3300013307 Bacteria 13996
129 Ga0157372_10192971 3300013307 Bacteria 2359
130 Ga0163163_10024708 3300014325 Bacteria 5721
131 Ga0163163_10089365 3300014325 Bacteria 3092
132 Ga0163163_10586416 3300014325 Bacteria 1178
133 Ga0182008_10005610 3300014497 Bacteria 7115
134 Ga0157379_10178594 3300014968 Bacteria 1918
135 Ga0157379_10475211 3300014968 Bacteria 1156
136 Ga0157376_10073813 3300014969 Bacteria 2906
137 Ga0157376_10249861 3300014969 Bacteria 1656
138 Ga0182006_1075015 3300015261 Bacteria 1245
139 Ga0182007_10028997 3300015262 Bacteria 1897
140 Ga0163161_10223727 3300017792 Unclassified 1458
141 Ga0224572_1000649 3300024225 Bacteria 4357
142 Ga0228598_1001170 3300024227 Bacteria 5792
143 Ga0209233_1003733 3300025261 Bacteria 5322
144 Ga0207656_10028419 3300025321 Bacteria 2296
145 Ga0207692_10157901 3300025898 Bacteria 1305
146 Ga0207642_10003153 3300025899 Bacteria 5171
147 Ga0207647_10030491 3300025904 Bacteria 3478
148 Ga0207685_10024377 3300025905 Bacteria 2073
149 Ga0207699_10117405 3300025906 Bacteria 1715
150 Ga0207705_10168066 3300025909 Bacteria 1650
151 Ga0207684_10000940 3300025910 Bacteria 32878
152 Ga0207654_10028460 3300025911 Bacteria 3046
153 Ga0207654_10032080 3300025911 Bacteria 2898
154 Ga0207707_10027780 3300025912 Bacteria 4947
155 Ga0207707_10049861 3300025912 Bacteria 3647
156 Ga0207695_10076780 3300025913 Bacteria 3395
157 Ga0207693_10003922 3300025915 Bacteria 12665
158 Ga0207693_10005723 3300025915 Bacteria 10322
159 Ga0207693_10288106 3300025915 Bacteria 1287
160 Ga0207663_10016010 3300025916 Unclassified 4149
161 Ga0207663_10062468 3300025916 Bacteria 2368
162 Ga0207662_10063215 3300025918 Bacteria 2226
163 Ga0207649_10120680 3300025920 Bacteria 1767
164 Ga0207649_10318674 3300025920 Unclassified 1142
165 Ga0207652_10358943 3300025921 Bacteria 1315
166 Ga0207652_10613069 3300025921 Bacteria 975
167 Ga0207646_10001375 3300025922 Bacteria 30160
168 Ga0207646_10111834 3300025922 Bacteria 2451
169 Ga0207694_10042520 3300025924 Bacteria 3505
170 Ga0207650_10475883 3300025925 Unclassified 1042
171 Ga0207700_10018013 3300025928 Unclassified 4732
172 Ga0207700_10032691 3300025928 Bacteria 3713
173 Ga0207700_10105277 3300025928 Bacteria 2259
174 Ga0207664_10110088 3300025929 Bacteria 2289
175 Ga0207664_10149937 3300025929 Bacteria 1980
176 Ga0207664_10152721 3300025929 Bacteria 1963
177 Ga0207706_10004134 3300025933 Bacteria 13688
178 Ga0207704_10012247 3300025938 Bacteria 4252
179 Ga0207665_10000040 3300025939 Bacteria 84223
180 Ga0207665_10015873 3300025939 Unclassified 4943
181 Ga0207665_10237559 3300025939 Bacteria 1342
182 Ga0207711_10000108 3300025941 Bacteria 86462
183 Ga0207689_10029574 3300025942 Bacteria 4573
184 Ga0207689_10165491 3300025942 Bacteria 1822
185 Ga0207661_10026286 3300025944 Bacteria 4433
186 Ga0207679_10002025 3300025945 Bacteria 12577
187 Ga0207667_10010925 3300025949 Bacteria 10582
188 Ga0207651_10700275 3300025960 Bacteria 892
189 Ga0207712_10073245 3300025961 Unclassified 2470
190 Ga0207640_10018688 3300025981 Bacteria 4079
191 Ga0207677_10007882 3300026023 Bacteria 5921
192 Ga0207703_10015421 3300026035 Bacteria 5959
193 Ga0207639_10189504 3300026041 Bacteria 1756
194 Ga0207702_10006233 3300026078 Bacteria 10311
195 Ga0207702_10024985 3300026078 Bacteria 4956
196 Ga0207702_10106023 3300026078 Bacteria 2490
197 Ga0207648_10019950 3300026089 Bacteria 6049
198 Ga0207676_10026238 3300026095 Bacteria 4332
199 Ga0207674_10005627 3300026116 Bacteria 14855
200 Ga0207683_10025510 3300026121 Bacteria 5100
201 Ga0207698_10004980 3300026142 Bacteria 8144
202 Ga0207698_10763121 3300026142 Bacteria 967
203 Ga0268266_10085960 3300028379 Bacteria 2749
204 Ga0268264_10043413 3300028381 Bacteria 3725
205 Ga0265338_10001794 3300028800 Bacteria 33790
206 Ga0265762_1000010 3300030760 Bacteria 22565
207 Ga0265770_1014220 3300030878 Unclassified 1199
208 Ga0265760_10000826 3300031090 Bacteria 8917
209 Ga0265760_10012785 3300031090 Bacteria 2402
210 Ga0265339_10054694 3300031249 Bacteria 2167
211 Ga0265339_10057311 3300031249 Bacteria 2107
212 Ga0265339_10146582 3300031249 Unclassified 1197
213 Ga0265316_10034618 3300031344 Unclassified 4101
214 Ga0316575_10162340 3300031665 Bacteria 924
215 Ga0265314_10028891 3300031711 Bacteria 4127
216 Ga0265314_10037729 3300031711 Bacteria 3499
217 Ga0316576_10360181 3300031727 Bacteria 1081
218 Ga0316583_10070811 3300032133 Bacteria 1220
219 Ga0373923_0074152 3300035111 Bacteria 1466
220 Ga0373945_0060984 3300035116 Bacteria 1408
221 Ga0316574_0171119 3300035398 Bacteria 1398
222 Ga0373933_0182527 3300035724 Bacteria 1339
223 Ga0373933_0195419 3300035724 Eukaryota 1293
224 Ga0373937_0012114 3300036401 Bacteria 7570
225 Ga0373925_0041240 3300037068 Bacteria 3421
226 Ga0436365_0230000 3300039437 Bacteria 1107
227 Ga0436360_0400231 3300039438 Unclassified 1143
228 Ga0436361_1217698 3300039447 Bacteria 1050
229 Ga0466963_0126495 3300044694 Bacteria 1762
230 Ga0466964_0030937 3300044706 Unclassified 2121
231 Ga0453684_0015044 3300044712 Bacteria 12278
232 Ga0466967_0169059 3300045976 Unclassified 2056
233 Ga0495603_0078293 3300046455 Bacteria 1939
234 Ga0495603_0102350 3300046455 Bacteria 1672
235 Ga0495629_0068843 3300046459 Bacteria 2470
236 Ga0495629_0098522 3300046459 Bacteria 2040
237 Ga0495580_0030955 3300046472 Bacteria 3870
238 Ga0495580_0063349 3300046472 Bacteria 2593
239 Ga0495580_0360548 3300046472 Unclassified 984
240 Ga0495580_0444287 3300046472 Unclassified 871
241 Ga0495582_0003808 3300046473 Bacteria 8490
242 Ga0495667_0253929 3300046559 Bacteria 1119
243 Ga0495686_0000031 3300047472 Bacteria 350171
244 Ga0495593_0287767 3300047673 Bacteria 822
245 Ga0496101_0034454 3300048904 Bacteria 3576
246 Ga0496102_0224480 3300048905 Unclassified 1771
247 Ga0496102_0640007 3300048905 Bacteria 986
248 Ga0496104_0000276 3300048907 Bacteria 45779
249 Ga0496104_0166702 3300048907 Unclassified 2112
250 Ga0496104_0615672 3300048907 Bacteria 996
251 Ga0496104_0726702 3300048907 Unclassified 900
252 Ga0496108_0079422 3300048911 Unclassified 2778
253 Ga0496109_0131948 3300048912 Unclassified 2332
254 Ga0496111_0297335 3300048914 Unclassified 1197
255 Ga0496112_0030611 3300048915 Bacteria 5210
256 Ga0496112_0056001 3300048915 Unclassified 3880
257 Ga0496113_0156069 3300048916 Unclassified 1802
258 Ga0496114_0028959 3300048917 Bacteria 4550
259 Ga0496115_0066795 3300048918 Unclassified 2907
260 Ga0496126_0000460 3300048929 Bacteria 81061
261 Ga0496126_0105225 3300048929 Unclassified 2464
262 Ga0496126_0226204 3300048929 Bacteria 1569
263 nmdc:mga0n895_143333_c1 3300050512 Bacteria 2418
264 nmdc:mga0n895_84739_c1 3300050512 Bacteria 3163
265 nmdc:mga0rr50_10315_c1 3300050513 Bacteria 5922
266 nmdc:mga0rr50_1424_c1 3300050513 Bacteria 13129
267 nmdc:mga0rr50_163501_c1 3300050513 Bacteria 1808
268 nmdc:mga0rr50_584891_c1 3300050513 Bacteria 951
269 nmdc:mga08x19_30451_c1 3300050514 Bacteria 3390
270 nmdc:mga0a205_682_c1 3300050515 Bacteria 27149
271 Ga0500644_0037751 3300053088 Bacteria 1581
272 Ga0500595_011689 3300053119 Unclassified 3422
273 Ga0224569_100309
274 LJNas_1001427
275 Ga0065715_10434590
276 Ga0070683_100006156
277 Ga0070670_100000860
278 Ga0070670_100186363
279 Ga0068869_100024223
280 Ga0070680_100139236
281 Ga0070682_100049284
282 Ga0068868_100002219
283 Ga0068868_100005046
284 Ga0070687_100015258
285 Ga0070661_100084892
286 Ga0070661_100122268
287 Ga0070671_100264457
288 Ga0070674_100240842
289 Ga0070673_100432522
290 Ga0070688_100267494
291 Ga0070709_10052121
292 Ga0070709_10198307
293 Ga0070714_100146644
294 Ga0070714_100204104
295 Ga0070713_100104250
296 Ga0070713_100109984
297 Ga0070713_100163224
298 Ga0070711_100002012
299 Ga0070711_100146920
300 Ga0070708_100001838
301 Ga0070708_100008554
302 Ga0070708_100042018
303 Ga0070708_100070301
304 Ga0070663_100017223
305 Ga0070681_10010583
306 Ga0070681_10161152
307 Ga0068867_100008862
308 Ga0070685_10229982
309 Ga0070706_100006876
310 Ga0070706_100063847
311 Ga0070707_100000816
312 Ga0070707_100116740
313 Ga0070698_100001667
314 Ga0070698_100113238
315 Ga0070698_100652799
316 Ga0070699_100001000
317 Ga0070699_100005599
318 Ga0070679_100083845
319 Ga0070679_100087976
320 Ga0070684_100008973
321 Ga0070684_100026388
322 Ga0070697_100000489
323 Ga0070697_100001374
324 Ga0070697_100019511
325 Ga0070697_100461272
326 Ga0068853_100087206
327 Ga0070686_100008337
328 Ga0070664_100012318
329 Ga0068857_100007205
330 Ga0068854_100034055
331 Ga0068854_100221648
332 Ga0068856_100001368
333 Ga0068856_100036305
334 Ga0068852_100067594
335 Ga0068852_100789831
336 Ga0068859_100100448
337 Ga0068864_100000444
338 Ga0068866_10004077
339 Ga0068861_100157722
340 Ga0068851_10009762
341 Ga0068870_10052456
342 Ga0068863_100065794
343 Ga0068858_100004255
344 Ga0068860_100059358
345 Ga0068862_100030281
346 Ga0068862_100781682
347 Ga0081538_10003524
348 Ga0070717_10015783
349 Ga0070717_10068286
350 Ga0070717_10160985
351 Ga0070715_10034559
352 Ga0070716_100003969
353 Ga0070716_100296997
354 Ga0070712_100002267
355 Ga0070712_100005560
356 Ga0070712_100070197
357 Ga0070712_100321000
358 Ga0097621_100057017
359 Ga0068871_100074035
360 Ga0068871_100261937
361 Ga0075433_10000499
362 Ga0075434_100000053
363 Ga0068865_100021063
364 Ga0075436_100001076
365 Ga0075436_100027765
366 Ga0075436_100238287
367 Ga0097620_100100442
368 Ga0075435_100000433
369 Ga0075435_100302485
370 Ga0105240_10095876
371 Ga0105240_10510336
372 Ga0105243_10294923
373 Ga0105241_10057333
374 Ga0105241_10323556
375 Ga0105248_10000006
376 Ga0105248_10038569
377 Ga0105237_10738758
378 Ga0105238_10100636
379 Ga0105238_10391850
380 Ga0105249_10013638
381 Ga0105239_10018047
382 Ga0105246_10031483
383 Ga0105246_10060447
384 Ga0105246_10149745
385 Ga0157373_10040158
386 Ga0157373_10097236
387 Ga0157373_10126667
388 Ga0157371_10027916
389 Ga0157371_10039090
390 Ga0157370_10153501
391 Ga0157369_10028543
392 Ga0157369_10093603
393 Ga0157374_10000662
394 Ga0157374_10023337
395 Ga0157374_10052383
396 Ga0157374_10297530
397 Ga0157378_10000416
398 Ga0157378_10042426
399 Ga0163162_10008714
400 Ga0157372_10005074
401 Ga0157372_10192971
402 Ga0163163_10024708
403 Ga0163163_10089365
404 Ga0163163_10586416
405 Ga0182008_10005610
406 Ga0157379_10178594
407 Ga0157379_10475211
408 Ga0157376_10073813
409 Ga0157376_10249861
410 Ga0182006_1075015
411 Ga0182007_10028997
412 Ga0163161_10223727
413 Ga0224572_1000649
414 Ga0228598_1001170
415 Ga0209233_1003733
416 Ga0207656_10028419
417 Ga0207692_10157901
418 Ga0207642_10003153
419 Ga0207647_10030491
420 Ga0207685_10024377
421 Ga0207699_10117405
422 Ga0207705_10168066
423 Ga0207684_10000940
424 Ga0207654_10028460
425 Ga0207654_10032080
426 Ga0207707_10027780
427 Ga0207707_10049861
428 Ga0207695_10076780
429 Ga0207693_10003922
430 Ga0207693_10005723
431 Ga0207693_10288106
432 Ga0207663_10016010
433 Ga0207663_10062468
434 Ga0207662_10063215
435 Ga0207649_10120680
436 Ga0207649_10318674
437 Ga0207652_10358943
438 Ga0207652_10613069
439 Ga0207646_10001375
440 Ga0207646_10111834
441 Ga0207694_10042520
442 Ga0207650_10475883
443 Ga0207700_10018013
444 Ga0207700_10032691
445 Ga0207700_10105277
446 Ga0207664_10110088
447 Ga0207664_10149937
448 Ga0207664_10152721
449 Ga0207706_10004134
450 Ga0207704_10012247
451 Ga0207665_10000040
452 Ga0207665_10015873
453 Ga0207665_10237559
454 Ga0207711_10000108
455 Ga0207689_10029574
456 Ga0207689_10165491
457 Ga0207661_10026286
458 Ga0207679_10002025
459 Ga0207667_10010925
460 Ga0207651_10700275
461 Ga0207712_10073245
462 Ga0207640_10018688
463 Ga0207677_10007882
464 Ga0207703_10015421
465 Ga0207639_10189504
466 Ga0207702_10006233
467 Ga0207702_10024985
468 Ga0207702_10106023
469 Ga0207648_10019950
470 Ga0207676_10026238
471 Ga0207674_10005627
472 Ga0207683_10025510
473 Ga0207698_10004980
474 Ga0207698_10763121
475 Ga0268266_10085960
476 Ga0268264_10043413
477 Ga0265338_10001794
478 Ga0265762_1000010
479 Ga0265770_1014220
480 Ga0265760_10000826
481 Ga0265760_10012785
482 Ga0265339_10054694
483 Ga0265339_10057311
484 Ga0265339_10146582
485 Ga0265316_10034618
486 Ga0316575_10162340
487 Ga0265314_10028891
488 Ga0265314_10037729
489 Ga0316576_10360181
490 Ga0316583_10070811
491 Ga0373923_0074152
492 Ga0373945_0060984
493 Ga0316574_0171119
494 Ga0373933_0182527
495 Ga0373933_0195419
496 Ga0373937_0012114
497 Ga0373925_0041240
498 Ga0436365_0230000
499 Ga0436360_0400231
500 Ga0436361_1217698
501 Ga0466963_0126495
502 Ga0466964_0030937
503 Ga0453684_0015044
504 Ga0466967_0169059
505 Ga0495603_0078293
506 Ga0495603_0102350
507 Ga0495629_0068843
508 Ga0495629_0098522
509 Ga0495580_0030955
510 Ga0495580_0063349
511 Ga0495580_0360548
512 Ga0495580_0444287
513 Ga0495582_0003808
514 Ga0495667_0253929
515 Ga0495686_0000031
516 Ga0495593_0287767
517 Ga0496101_0034454
518 Ga0496102_0224480
519 Ga0496102_0640007
520 Ga0496104_0000276
521 Ga0496104_0166702
522 Ga0496104_0615672
523 Ga0496104_0726702
524 Ga0496108_0079422
525 Ga0496109_0131948
526 Ga0496111_0297335
527 Ga0496112_0030611
528 Ga0496112_0056001
529 Ga0496113_0156069
530 Ga0496114_0028959
531 Ga0496115_0066795
532 Ga0496126_0000460
533 Ga0496126_0105225
534 Ga0496126_0226204
535 nmdc:mga0n895_143333_c1
536 nmdc:mga0n895_84739_c1
537 nmdc:mga0rr50_10315_c1
538 nmdc:mga0rr50_1424_c1
539 nmdc:mga0rr50_163501_c1
540 nmdc:mga0rr50_584891_c1
541 nmdc:mga08x19_30451_c1
542 nmdc:mga0a205_682_c1
543 Ga0500644_0037751
544 Ga0500595_011689

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03167

UDG

Uracil DNA glycosylase superfamily

103

279

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.91 14 236
2dp6-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase in complex with ap:c containing dna 0.8941 14 236
1vk2-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase (tm0511) from thermotoga maritima at 1.90 a resolution 0.8161 12 233
1ui1-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase from thermus thermophilus hb8 0.7857 13 235
1vk2-assembly1.cif.gz_A crystal structure of uracil-dna glycosylase (tm0511) from thermotoga maritima at 1.90 a resolution 0.7765 12 233
ID Description Score Start End Superfamily
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9105 14 236 3.40.470.10
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.9052 14 236 3.40.470.10
af_P9WM53_47_267_3.40.470.10 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8974 14 236 3.40.470.10
2d3yA00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8947 14 236 3.40.470.10
1ui0A00 Alpha Beta;3-Layer(aba) Sandwich;Uracil-DNA Glycosylase, subunit E;Uracil-DNA glycosylase-like domain 0.8029 13 235 3.40.470.10
ID Description Score Start End GO Terms
AF-A0A2V9TRW4-F1-model_v4 Uracil-DNA glycosylase 0.9662 85 236 GO:0006281
GO:0046872
GO:0051539
GO:0097506
AF-A0A2V9TRW4-F1-model_v4 Uracil-DNA glycosylase 0.96 85 236 GO:0006281
GO:0046872
GO:0051539
GO:0097506
AF-A0A7Y5LY32-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9519 55 235 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-A0A2V9MXE0-F1-model_v4 Type-5 uracil-DNA glycosylase 0.9513 9 236 GO:0004844
GO:0006284
GO:0033958
GO:0046872
GO:0051539
AF-A0A7C6F4J1-F1-model_v4 Uracil-DNA glycosylase 0.9507 83 236 GO:0006281
GO:0046872
GO:0051539
GO:0097506

Map