F378302

General Info

Members Datasets Scaffolds Average Seq Length
272 194 536 409

Family's Representative Sequence

Representative Sequence 3300009011|Ga0105251_10007150|Ga0105251_100071507
Length 454
Sequence MRLILFYFIFAPEPIFVRLEITGGIFEYFVYYVYNKFFHTKEIIPMSFEQTLEKYAALAVNVGVNIQPGQILSINAPLEAAPFVRLVTEKAYKSGAKHVYVDWNDEILTRLKFDLAPEEAFSEFPAWKAHAREELAKEDAAFMSIYAENPDLLKGVDAKRIASAHKVAGEAMKVYRDYLQADKVSWCVISVPTKEWAAKVFPDVTSEKQEEKLWDAIFQATRANLENPVEAWKKHDETLHKKVDYLNEKHYKALHYTGPGTDLTIELPEKHIWAGASSLNEKNVPFMANIPTEEVFTMPLKTGVNGQVSSTKPLAFAGNIIDNFTLTFENGRIVEYKADVGEEALKHLVETDEGSHFLGEVALVPHDSPISNTNILFYNTLFDENASCHLAIGHAHATNLIGGKTMTEEEFAENGANSSITHEDFMIGSAKLNIDGITADGTHEPIFRKGNWAF

Samples

Sample ID Description Type Environment
1 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
2 2162886006 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 Metagenome Rhizosphere
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
11 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
14 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
15 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
16 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
17 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
18 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
19 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
20 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
21 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
22 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
23 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
29 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
30 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
31 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
32 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
33 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
34 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
37 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
38 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
39 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
40 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
41 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
42 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
43 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
44 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
45 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
46 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
47 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
48 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
49 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
50 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
51 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300049134 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
53 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
55 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
56 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
59 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
60 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
61 2511231119 Bacillus velezensis CAU B946 Isolate Rhizosphere
62 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
63 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
64 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
65 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
66 2554235283 Bacillus safensis VK Isolate Rhizosphere
67 2554235469 Sporolactobacillus laevolacticus DSM 442 Isolate Rhizosphere
68 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
69 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
70 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
71 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
72 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
73 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
74 2643221729 Bacillus sp. Root11 Isolate Unclassified
75 2643221730 Bacillus sp. Root131 Isolate Unclassified
76 2643221735 Bacillus sp. Root920 Isolate Unclassified
77 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
78 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
79 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
80 2684622632 Bacillus cereus 905 Isolate Unclassified
81 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
82 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
83 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
84 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
85 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
86 2711768088 Sporolactobacillus terrae DSM 11697 Isolate Rhizosphere
87 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
88 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
89 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
90 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
91 2738541295 Bacillus sp. OK085 Isolate Unclassified
92 2738541358 Bacillus sp. OV752 Isolate Unclassified
93 2738543006 Bacillus sp. OK077 Isolate Unclassified
94 2738543010 Bacillus sp. YR335 Isolate Unclassified
95 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
96 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
97 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
98 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
99 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
100 2811994870 Bacillus sp. JB4 Isolate Unclassified
101 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
102 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
103 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
104 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
105 2818991459 Paenibacillus sp. 597 Isolate Unclassified
106 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
107 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
108 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
109 2831905167 Ammoniphilus oxalaticus RAOx-1 Isolate Rhizosphere
110 2842682962 Bacillus sp. R-72492 Isolate Unclassified
111 2849139964 Bacillus sp. R-71875 Isolate Unclassified
112 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
113 2857581216 Bacillus sp. R-71922 Isolate Unclassified
114 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
115 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
116 2860837431 Bacillus sp. WR11 Isolate Unclassified
117 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
118 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
119 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
120 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
121 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
122 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
123 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
124 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
125 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
126 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
127 2904162308 Paenibacillus sp. AD87 Isolate Unclassified
128 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
129 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
130 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
131 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
132 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
133 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
134 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
135 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
136 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
137 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
138 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
139 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
140 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
141 2919726948 Bacillus pumilus 4489 Isolate Unclassified
142 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
143 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
144 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
145 2938917290 Bacillus sp. CR71 Isolate Unclassified
146 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
147 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
148 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
149 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
150 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
151 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
152 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
153 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
154 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
155 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
156 2965761152 Bacillus sp. COPE52 Isolate Unclassified
157 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
158 2969141011 Bacillus velezensis MH25 Isolate Unclassified
159 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
160 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
161 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
162 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
163 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
164 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
165 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
166 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
167 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
168 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
169 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
170 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
171 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
172 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
173 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
174 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
175 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
176 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
177 8002317523 Cohnella sp. GbtcB17 Isolate Unclassified
178 8007371054 Clostridium sp. YIM B02515 Isolate Unclassified
179 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
180 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
181 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
182 8022653035 Bacillus sp. Rc4 Isolate Unclassified
183 8022792930 Bacillus sp. Xin Isolate Rhizosphere
184 8023438354 Bacillus sp. BH2 Isolate Unclassified
185 8023444577 Bacillus sp. BH32 Isolate Unclassified
186 8046991243 Cohnella rhizosphaerae DSM 28161 Isolate Rhizosphere
187 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
188 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
189 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
190 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
191 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
192 8057473075 Paenibacillus endoradicis T3-5-0-4 Isolate Unclassified
193 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
194 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 41.18
Metatranscriptomes 3.68
Isolates 55.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.76
Nodule 0.37
Rhizoplane 1.1
Rhizosphere 51.84
Stem 0
Stem Tuber 0
Unclassified 1.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105251_10007150 3300009011 Bacteria 6944
2 SwRhRL3b_contig_2255499 2162886006 Bacteria 2041
3 JGI25151J46595_10000020 3300003187 Bacteria 233547
4 JGI25151J46595_10003241 3300003187 Bacteria 9063
5 JGI25151J46595_10011272 3300003187 Bacteria 4117
6 JGI25151J46595_10033371 3300003187 Bacteria 1983
7 Ga0006562J51391_1003630 3300003578 Bacteria 1457
8 Ga0055532_1000724 3300003758 Bacteria 12225
9 Ga0055541_1001027 3300003841 Bacteria 6511
10 Ga0055541_1002624 3300003841 Bacteria 3526
11 Ga0065704_10070873 3300005289 Bacteria 15162
12 Ga0065707_10082490 3300005295 Bacteria 14583
13 Ga0070658_10285841 3300005327 Bacteria 1404
14 Ga0105251_10005220 3300009011 Bacteria 8562
15 Ga0105244_10001028 3300009036 Bacteria 23413
16 Ga0105244_10018117 3300009036 Bacteria 3961
17 Ga0105244_10030950 3300009036 Bacteria 2843
18 Ga0105244_10038767 3300009036 Bacteria 2483
19 Ga0105250_10001279 3300009092 Bacteria 13821
20 Ga0105250_10003416 3300009092 Bacteria 7528
21 Ga0105250_10017418 3300009092 Bacteria 2921
22 Ga0114129_10300124 3300009147 Bacteria 2141
23 Ga0114129_10443954 3300009147 Bacteria 1703
24 Ga0105249_10051677 3300009553 Bacteria 3750
25 Ga0105246_10017204 3300011119 Bacteria 4593
26 Ga0105246_10028447 3300011119 Bacteria 3672
27 Ga0105246_10032202 3300011119 Bacteria 3475
28 Ga0105246_10064642 3300011119 Bacteria 2557
29 Ga0157371_10002231 3300013102 Bacteria 18731
30 Ga0209784_100077 3300025224 Bacteria 139569
31 Ga0209566_100064 3300025225 Bacteria 191508
32 Ga0209566_100183 3300025225 Bacteria 66605
33 Ga0209566_100418 3300025225 Bacteria 33095
34 Ga0209147_100042 3300025229 Bacteria 301263
35 Ga0209147_102015 3300025229 Bacteria 5856
36 Ga0209437_100777 3300025233 Bacteria 15082
37 Ga0209258_105212 3300025242 Bacteria 2259
38 Ga0209130_1001765 3300025284 Bacteria 12791
39 Ga0209130_1001845 3300025284 Bacteria 12186
40 Ga0209130_1004282 3300025284 Bacteria 5515
41 Ga0209025_1000001 3300025294 Bacteria 1888151
42 Ga0209025_1001060 3300025294 Bacteria 40037
43 Ga0209025_1001937 3300025294 Bacteria 23924
44 Ga0209025_1002016 3300025294 Bacteria 23176
45 Ga0209025_1003080 3300025294 Bacteria 16352
46 Ga0209025_1007576 3300025294 Bacteria 8048
47 Ga0209025_1009002 3300025294 Bacteria 7051
48 Ga0209025_1011622 3300025294 Bacteria 5771
49 Ga0209025_1015068 3300025294 Bacteria 4693
50 Ga0209025_1016513 3300025294 Bacteria 4344
51 Ga0209025_1035736 3300025294 Bacteria 2238
52 Ga0209025_1050867 3300025294 Bacteria 1652
53 Ga0209025_1062298 3300025294 Bacteria 1385
54 Ga0207696_1001145 3300025711 Bacteria 15239
55 Ga0207696_1001904 3300025711 Bacteria 10642
56 Ga0207696_1006848 3300025711 Bacteria 4535
57 Ga0207655_1000138 3300025728 Bacteria 140079
58 Ga0207655_1005381 3300025728 Bacteria 8718
59 Ga0207655_1016963 3300025728 Bacteria 3952
60 Ga0207655_1023090 3300025728 Bacteria 3096
61 Ga0207713_1007253 3300025735 Bacteria 6582
62 Ga0207713_1008836 3300025735 Bacteria 5742
63 Ga0207661_10127125 3300025944 Unclassified 2178
64 Ga0207712_10047105 3300025961 Bacteria 2991
65 Ga0209371_1003940 3300027312 Bacteria 6809
66 Ga0237817_10039 3300030083 Bacteria 45110
67 Ga0237817_10118 3300030083 Bacteria 24516
68 Ga0307408_100071365 3300031548 Bacteria 2567
69 Ga0307412_10064866 3300031911 Bacteria 2469
70 Ga0307409_100084739 3300031995 Bacteria 2574
71 Ga0307416_100149994 3300032002 Bacteria 2136
72 Ga0395900_0227871 3300037418 Bacteria 1876
73 Ga0395898_0066528 3300037466 Unclassified 3491
74 Ga0237819_00078 3300038705 Bacteria 34994
75 Ga0237819_00480 3300038705 Bacteria 13566
76 Ga0439449_0000086 3300042007 Bacteria 30358
77 Ga0453684_0104599 3300044712 Bacteria 3455
78 Ga0495649_0060645 3300046694 Bacteria 2035
79 Ga0495602_0055684 3300048088 Bacteria 3482
80 Ga0496110_0295077 3300048913 Bacteria 1477
81 Ga0496111_0021056 3300048914 Bacteria 4548
82 Ga0496112_0271638 3300048915 Bacteria 1644
83 Ga0496116_0013500 3300048919 Bacteria 6579
84 Ga0496116_0031936 3300048919 Bacteria 3759
85 Ga0496116_0040000 3300048919 Bacteria 3233
86 Ga0496116_0063688 3300048919 Bacteria 2374
87 Ga0496121_0028643 3300048924 Bacteria 5179
88 Ga0496121_0039881 3300048924 Bacteria 4130
89 Ga0496121_0043884 3300048924 Bacteria 3865
90 Ga0496121_0221033 3300048924 Bacteria 1334
91 Ga0496122_0012122 3300048925 Bacteria 8632
92 Ga0496122_0022881 3300048925 Bacteria 5533
93 Ga0496122_0064512 3300048925 Bacteria 2664
94 Ga0496123_0029245 3300048926 Bacteria 4062
95 Ga0496124_0001270 3300048927 Bacteria 38413
96 Ga0496124_0025676 3300048927 Bacteria 5330
97 Ga0496124_0089685 3300048927 Bacteria 2510
98 Ga0496124_0105460 3300048927 Bacteria 2277
99 Ga0496125_0001286 3300048928 Bacteria 37191
100 Ga0496125_0001665 3300048928 Bacteria 31236
101 Ga0496125_0003804 3300048928 Bacteria 17943
102 Ga0496125_0012434 3300048928 Bacteria 8451
103 Ga0496125_0073946 3300048928 Bacteria 2645
104 Ga0496125_0110124 3300048928 Bacteria 1997
105 Ga0496126_0006814 3300048929 Bacteria 12673
106 Ga0496126_0127833 3300048929 Bacteria 2198
107 Ga0501343_000653 3300049132 Bacteria 2114
108 Ga0501345_00347 3300049134 Bacteria 1500
109 Ga0501305_003106 3300049161 Bacteria 1858
110 Ga0501305_005716 3300049161 Bacteria 1519
111 Ga0501305_009988 3300049161 Bacteria 1259
112 Ga0501312_006590 3300049528 Bacteria 1454
113 Ga0501317_000607 3300049533 Bacteria 2643
114 Ga0501318_004054 3300049534 Bacteria 1385
115 Ga0501321_005394 3300049537 Bacteria 1262
116 Ga0501217_001461 3300049661 Bacteria 4436
117 Ga0501217_009136 3300049661 Bacteria 2150
118 nmdc:mga0a205_254440_c1 3300050515 Unclassified 1635
119 2511178878 2510917027 Bacteria 5287437
120 2511699339 2511231119 Bacteria 4019861
121 2512640164 2512564013 Bacteria 6286191
122 2540606580 2540341094 Bacteria 4061186
123 2545556452 2545555800 Bacteria 4222588
124 2553395999 2551306519 Bacteria 5465154
125 2555469804 2554235283 Bacteria 3683090
126 2556065733 2554235469 Bacteria 3590176
127 2556065938 2554235469 Bacteria 3590176
128 2563927511 2563366752 Bacteria 4961801
129 2578929890 2576861599 Bacteria 4217202
130 2587739212 2585428059 Bacteria 8696589
131 2631985141 2630968484 Bacteria 3876276
132 2643736141 2643221543 Bacteria 6628015
133 2643736142 2643221543 Bacteria 6628015
134 2644427977 2643221676 Bacteria 8119172
135 2644703745 2643221729 Bacteria 6621700
136 2644712682 2643221730 Bacteria 6523787
137 2644739722 2643221735 Bacteria 3676263
138 2651529545 2648501850 Bacteria 3975476
139 2672334829 2671180330 Bacteria 5521719
140 2674419640 2671180844 Bacteria 4164150
141 2685148284 2684622632 Bacteria 5380049
142 2686996615 2684623153 Bacteria 3878815
143 2687497918 2687453109 Bacteria 3860091
144 2695627289 2695420354 Bacteria 3922431
145 2698324875 2695420987 Bacteria 6152737
146 2705992222 2703719227 Bacteria 5631989
147 2712199185 2711768088 Bacteria 3195027
148 2712199394 2711768088 Bacteria 3195027
149 2717916914 2716884898 Bacteria 3928789
150 2721503664 2718218445 Bacteria 5113413
151 2723604234 2721755693 Bacteria 6126117
152 2730139932 2728369359 Bacteria 5621728
153 2738815875 2738541295 Bacteria 5730091
154 2739158764 2738541358 Bacteria 5932299
155 2739211524 2738543006 Bacteria 5904091
156 2739231435 2738543010 Bacteria 5583595
157 2753812034 2751185905 Bacteria 6142767
158 2791215361 2788500588 Bacteria 4584915
159 2793182342 2791355222 Bacteria 5898266
160 2802440055 2802428803 Bacteria 5806948
161 2809054818 2808606399 Bacteria 4021018
162 2812315748 2811994870 Bacteria 3776934
163 2816863695 2816332186 Bacteria 5331395
164 2817479704 2816332295 Bacteria 4352468
165 2819584893 2818991443 Bacteria 6598732
166 2819629076 2818991451 Bacteria 4697364
167 2819671990 2818991459 Bacteria 8736032
168 2819724514 2818991468 Bacteria 3723169
169 2821112795 2821111986 Bacteria 6894338
170 2821112796 2821111986 Bacteria 6894338
171 2823527749 2823526263 Bacteria 3765752
172 2831907247 2831905167 Bacteria 3319172
173 2842685416 2842682962 Bacteria 5589973
174 2849140599 2849139964 Bacteria 5613304
175 2857456182 2857453340 Bacteria 8090534
176 2857584554 2857581216 Bacteria 5522813
177 2857605648 2857604169 Bacteria 5111450
178 2857612039 2857609550 Bacteria 3753890
179 2860839001 2860837431 Bacteria 4202080
180 2864736621 2864733723 Bacteria 6770668
181 2864736622 2864733723 Bacteria 6770668
182 2865005741 2865002811 Bacteria 6333767
183 2877770109 2877768649 Bacteria 3957164
184 2880171113 2880169592 Bacteria 3900066
185 2881647023 2881644220 Bacteria 5302661
186 2885529267 2885526491 Bacteria 7164189
187 2885529268 2885526491 Bacteria 7164189
188 2889046056 2889042446 Bacteria 7618936
189 2889046057 2889042446 Bacteria 7618936
190 2889280207 2889276214 Bacteria 5979355
191 2897111122 2897109615 Bacteria 4009619
192 2898909029 2898907183 Bacteria 4067722
193 2904164552 2904162308 Bacteria 7086713
194 2904164554 2904162308 Bacteria 7086713
195 2904492947 2904490793 Bacteria 7046938
196 2904492948 2904490793 Bacteria 7046938
197 2904560651 2904560550 Bacteria 4029838
198 2904595852 2904595352 Bacteria 6124848
199 2904610583 2904606771 Bacteria 4684500
200 2904758887 2904755435 Bacteria 7986759
201 2907202587 2907202186 Bacteria 6632024
202 2908665974 2908665501 Bacteria 3678115
203 2915601296 2915597211 Bacteria 6475886
204 2915607557 2915606848 Bacteria 6032732
205 2919093831 2919093281 Bacteria 3660974
206 2919162230 2919160200 Bacteria 6929020
207 2919419426 2919414237 Bacteria 5429133
208 2919426103 2919425241 Bacteria 8055701
209 2919426757 2919425241 Bacteria 8055701
210 2919729263 2919726948 Bacteria 3696050
211 2929233525 2929233124 Bacteria 5948380
212 2931389498 2931384279 Bacteria 7299545
213 2931389499 2931384279 Bacteria 7299545
214 2936364413 2936361878 Bacteria 5632809
215 2938917699 2938917290 Bacteria 5914775
216 2939596388 2939593269 Bacteria 4798695
217 2939681165 2939679117 Bacteria 6921672
218 2939681166 2939679117 Bacteria 6921672
219 2939705796 2939702853 Bacteria 5139229
220 2945991832 2945991243 Bacteria 7008369
221 2945991833 2945991243 Bacteria 7008369
222 2946054618 2946053406 Bacteria 6978655
223 2947426991 2947426588 Bacteria 5357194
224 2954774761 2954773129 Bacteria 3741715
225 2956898717 2956897341 Bacteria 5447711
226 2962292429 2962290636 Bacteria 4072939
227 2964377346 2964375228 Bacteria 4909004
228 2965761540 2965761152 Bacteria 5806513
229 2969138395 2969136845 Bacteria 3923176
230 2969142558 2969141011 Bacteria 4118468
231 2969767815 2969765954 Bacteria 4216713
232 2969772192 2969770375 Bacteria 4271280
233 2971411858 2971410472 Bacteria 8311090
234 2971894874 2971893375 Bacteria 3929648
235 2977255356 2977254563 Bacteria 4828420
236 2977259067 2977254563 Bacteria 4828420
237 2980494191 2980492589 Bacteria 4072961
238 2990276271 2990275345 Bacteria 4887158
239 2990280113 2990275345 Bacteria 4887158
240 2996708390 2996706504 Bacteria 5757485
241 3001271466 3001267043 Bacteria 4823521
242 3001272421 3001272096 Bacteria 4729684
243 3001895580 3001892409 Bacteria 6328293
244 3006860035 3006858327 Bacteria 4317835
245 3006880640 3006879489 Bacteria 4064221
246 3006972352 3006969106 Bacteria 4739423
247 3006977620 3006973921 Bacteria 4423788
248 3006987853 3006984091 Bacteria 4207523
249 3006992348 3006988479 Bacteria 4767936
250 648170381 648028048 Bacteria 5394884
251 8002321994 8002317523 Bacteria 8051857
252 8007375236 8007371054 Bacteria 4849201
253 8007379914 8007375930 Bacteria 4080554
254 8022621433 8022621104 Bacteria 5241040
255 8022630733 8022630665 Bacteria 3886130
256 8022653329 8022653035 Bacteria 4035078
257 8022793839 8022792930 Bacteria 5693794
258 8023438520 8023438354 Bacteria 5779374
259 8023450152 8023444577 Bacteria 5661597
260 8046997566 8046991243 Bacteria 8497463
261 8051952995 8051952484 Bacteria 3926774
262 8052174503 8052174270 Bacteria 3881265
263 8054284647 8054280661 Bacteria 4232245
264 8055536516 8055531788 Bacteria 5249694
265 8056538032 8056533031 Bacteria 8964429
266 8057478001 8057473075 Bacteria 5892720
267 8057585245 8057582654 Bacteria 5218944
268 8057633516 8057632132 Bacteria 4726859
269 Ga0105251_10007150
270 SwRhRL3b_contig_2255499
271 JGI25151J46595_10000020
272 JGI25151J46595_10003241
273 JGI25151J46595_10011272
274 JGI25151J46595_10033371
275 Ga0006562J51391_1003630
276 Ga0055532_1000724
277 Ga0055541_1001027
278 Ga0055541_1002624
279 Ga0065704_10070873
280 Ga0065707_10082490
281 Ga0070658_10285841
282 Ga0105251_10005220
283 Ga0105244_10001028
284 Ga0105244_10018117
285 Ga0105244_10030950
286 Ga0105244_10038767
287 Ga0105250_10001279
288 Ga0105250_10003416
289 Ga0105250_10017418
290 Ga0114129_10300124
291 Ga0114129_10443954
292 Ga0105249_10051677
293 Ga0105246_10017204
294 Ga0105246_10028447
295 Ga0105246_10032202
296 Ga0105246_10064642
297 Ga0157371_10002231
298 Ga0209784_100077
299 Ga0209566_100064
300 Ga0209566_100183
301 Ga0209566_100418
302 Ga0209147_100042
303 Ga0209147_102015
304 Ga0209437_100777
305 Ga0209258_105212
306 Ga0209130_1001765
307 Ga0209130_1001845
308 Ga0209130_1004282
309 Ga0209025_1000001
310 Ga0209025_1001060
311 Ga0209025_1001937
312 Ga0209025_1002016
313 Ga0209025_1003080
314 Ga0209025_1007576
315 Ga0209025_1009002
316 Ga0209025_1011622
317 Ga0209025_1015068
318 Ga0209025_1016513
319 Ga0209025_1035736
320 Ga0209025_1050867
321 Ga0209025_1062298
322 Ga0207696_1001145
323 Ga0207696_1001904
324 Ga0207696_1006848
325 Ga0207655_1000138
326 Ga0207655_1005381
327 Ga0207655_1016963
328 Ga0207655_1023090
329 Ga0207713_1007253
330 Ga0207713_1008836
331 Ga0207661_10127125
332 Ga0207712_10047105
333 Ga0209371_1003940
334 Ga0237817_10039
335 Ga0237817_10118
336 Ga0307408_100071365
337 Ga0307412_10064866
338 Ga0307409_100084739
339 Ga0307416_100149994
340 Ga0395900_0227871
341 Ga0395898_0066528
342 Ga0237819_00078
343 Ga0237819_00480
344 Ga0439449_0000086
345 Ga0453684_0104599
346 Ga0495649_0060645
347 Ga0495602_0055684
348 Ga0496110_0295077
349 Ga0496111_0021056
350 Ga0496112_0271638
351 Ga0496116_0013500
352 Ga0496116_0031936
353 Ga0496116_0040000
354 Ga0496116_0063688
355 Ga0496121_0028643
356 Ga0496121_0039881
357 Ga0496121_0043884
358 Ga0496121_0221033
359 Ga0496122_0012122
360 Ga0496122_0022881
361 Ga0496122_0064512
362 Ga0496123_0029245
363 Ga0496124_0001270
364 Ga0496124_0025676
365 Ga0496124_0089685
366 Ga0496124_0105460
367 Ga0496125_0001286
368 Ga0496125_0001665
369 Ga0496125_0003804
370 Ga0496125_0012434
371 Ga0496125_0073946
372 Ga0496125_0110124
373 Ga0496126_0006814
374 Ga0496126_0127833
375 Ga0501343_000653
376 Ga0501345_00347
377 Ga0501305_003106
378 Ga0501305_005716
379 Ga0501305_009988
380 Ga0501312_006590
381 Ga0501317_000607
382 Ga0501318_004054
383 Ga0501321_005394
384 Ga0501217_001461
385 Ga0501217_009136
386 nmdc:mga0a205_254440_c1
387 2511178878
388 2511699339
389 2512640164
390 2540606580
391 2545556452
392 2553395999
393 2555469804
394 2556065733
395 2556065938
396 2563927511
397 2578929890
398 2587739212
399 2631985141
400 2643736141
401 2643736142
402 2644427977
403 2644703745
404 2644712682
405 2644739722
406 2651529545
407 2672334829
408 2674419640
409 2685148284
410 2686996615
411 2687497918
412 2695627289
413 2698324875
414 2705992222
415 2712199185
416 2712199394
417 2717916914
418 2721503664
419 2723604234
420 2730139932
421 2738815875
422 2739158764
423 2739211524
424 2739231435
425 2753812034
426 2791215361
427 2793182342
428 2802440055
429 2809054818
430 2812315748
431 2816863695
432 2817479704
433 2819584893
434 2819629076
435 2819671990
436 2819724514
437 2821112795
438 2821112796
439 2823527749
440 2831907247
441 2842685416
442 2849140599
443 2857456182
444 2857584554
445 2857605648
446 2857612039
447 2860839001
448 2864736621
449 2864736622
450 2865005741
451 2877770109
452 2880171113
453 2881647023
454 2885529267
455 2885529268
456 2889046056
457 2889046057
458 2889280207
459 2897111122
460 2898909029
461 2904164552
462 2904164554
463 2904492947
464 2904492948
465 2904560651
466 2904595852
467 2904610583
468 2904758887
469 2907202587
470 2908665974
471 2915601296
472 2915607557
473 2919093831
474 2919162230
475 2919419426
476 2919426103
477 2919426757
478 2919729263
479 2929233525
480 2931389498
481 2931389499
482 2936364413
483 2938917699
484 2939596388
485 2939681165
486 2939681166
487 2939705796
488 2945991832
489 2945991833
490 2946054618
491 2947426991
492 2954774761
493 2956898717
494 2962292429
495 2964377346
496 2965761540
497 2969138395
498 2969142558
499 2969767815
500 2969772192
501 2971411858
502 2971894874
503 2977255356
504 2977259067
505 2980494191
506 2990276271
507 2990280113
508 2996708390
509 3001271466
510 3001272421
511 3001895580
512 3006860035
513 3006880640
514 3006972352
515 3006977620
516 3006987853
517 3006992348
518 648170381
519 8002321994
520 8007375236
521 8007379914
522 8022621433
523 8022630733
524 8022653329
525 8022793839
526 8023438520
527 8023450152
528 8046997566
529 8051952995
530 8052174503
531 8054284647
532 8055536516
533 8056538032
534 8057478001
535 8057585245
536 8057633516

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02073

Peptidase_M29

Thermophilic metalloprotease (M29)

48

452

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zjc-assembly1.cif.gz_A-2 aminopeptidase s from s. aureus 0.9833 6 411
4icq-assembly1.cif.gz_B structural basis for substrate recognition and reaction mechanism of bacterial aminopeptidase peps 0.9764 6 412
4ics-assembly1.cif.gz_B crystal structure of peps from streptococcus pneumoniae in complex with a substrate 0.9695 1 412
1zjc-assembly1.cif.gz_A-2 aminopeptidase s from s. aureus 0.9645 6 411
4ics-assembly1.cif.gz_B crystal structure of peps from streptococcus pneumoniae in complex with a substrate 0.9626 1 412
ID Description Score Start End Superfamily
1zjcA01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.9692 6 181 3.40.1830.10
2ayiA01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.9685 6 177 3.40.1830.10
2ayiA01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.947 6 177 3.40.1830.10
1zjcA01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.9431 6 181 3.40.1830.10
4icsB01 Alpha Beta;3-Layer(aba) Sandwich;Thermophilic metalloprotease-like;Thermophilic metalloprotease (M29) 0.9369 1 181 3.40.1830.10
ID Description Score Start End GO Terms
AF-A0A3D1J9D9-F1-model_v4 Aminopeptidase 0.9948 167 411 GO:0004177
GO:0006508
GO:0046872
AF-A0A3F3LDW4-F1-model_v4 deleted 0.9938 282 387
AF-A0A6L4LG43-F1-model_v4 deleted 0.9929 317 411
AF-A0A353HAK8-F1-model_v4 Aminopeptidase 0.9924 240 412 GO:0004177
GO:0006508
GO:0046872
AF-D9PRC2-F1-model_v4 deleted 0.9923 195 412

Map