F378203

General Info

Members Datasets Scaffolds Average Seq Length
272 195 544 252

Family's Representative Sequence

Representative Sequence 3300005467|Ga0070706_100000218|Ga0070706_10000021844
Length 299
Sequence MAPPLRVTIWNENVHERKNPIVAKIYPAGIHGCIADALKIDDVVAGVADAGSELATGRVRPVGGPDGRLRSASKSFGAAATLQVRTATLDEPEHGLSEKILDETDVLIWWGHAAHGRVKDPIADRVLKRVWEGMGFVALHSSHYSKIFKRLMGTSCSLTWREAGEKERIWVCSPAHPIARGINRYFEIENTEMYGEPFAIPPPDEIVFISWYEGGDVFRSGCTWKRGNGKIFYFAPGHEIYPIYFNPSVQRVLRNAVRWAAPDSEKWIDSCPQIPISEACEPLEQKGPRLHKEGEEGFR

Samples

Sample ID Description Type Environment
1 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
7 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
44 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
45 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
50 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
51 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
65 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
92 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
95 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
98 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
99 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
100 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
103 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
104 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
105 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
109 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
110 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
111 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
112 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
113 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
114 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
115 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
116 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
117 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
118 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
119 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
120 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
121 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
122 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
123 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
133 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
134 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
135 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
136 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
137 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
138 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
139 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
140 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
141 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
142 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
143 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
144 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
147 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
148 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
157 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
158 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
159 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
160 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 2643221731 Bacillus sp. Root147 Isolate Unclassified
164 2643221732 Bacillus sp. Root239 Isolate Unclassified
165 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
166 2738543010 Bacillus sp. YR335 Isolate Unclassified
167 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
168 2818991441 Niallia circulans 3243 Isolate Rhizosphere
169 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
170 2842682962 Bacillus sp. R-72492 Isolate Unclassified
171 2842882022 Bacillus sp. R-71893 Isolate Unclassified
172 2849139964 Bacillus sp. R-71875 Isolate Unclassified
173 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
174 2857581216 Bacillus sp. R-71922 Isolate Unclassified
175 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
176 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
177 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
178 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
179 2919720352 Priestia megaterium 4340 Isolate Unclassified
180 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
181 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
182 2929004312 Priestia megaterium 1104 Isolate Unclassified
183 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
184 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
185 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
186 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
187 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
188 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
189 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
190 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
191 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
192 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
193 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
194 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
195 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 84.56
Metatranscriptomes 3.31
Isolates 12.13

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.04
Nodule 0
Rhizoplane 13.6
Rhizosphere 70.22
Stem 0
Stem Tuber 0
Unclassified 4.04

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070706_100000218 3300005467 Bacteria 70622
2 JGI25151J46595_10051008 3300003187 Bacteria 1404
3 rootH1_10005221 3300003316 Bacteria 24650
4 rootL2_10221454 3300003322 Bacteria 5644
5 Ga0006562J51391_1004339 3300003578 Bacteria 4930
6 Ga0055528_1008775 3300003790 Bacteria 4284
7 Ga0055541_1000515 3300003841 Bacteria 10734
8 Ga0070676_10028758 3300005328 Bacteria 3157
9 Ga0070670_100082331 3300005331 Bacteria 2765
10 Ga0070666_10089511 3300005335 Bacteria 2112
11 Ga0068868_100477629 3300005338 Bacteria 1088
12 Ga0070661_100057317 3300005344 Bacteria 2855
13 Ga0070668_100081645 3300005347 Bacteria 2535
14 Ga0070668_100191644 3300005347 Bacteria 1674
15 Ga0070675_100027537 3300005354 Bacteria 4568
16 Ga0070675_100124267 3300005354 Bacteria 2194
17 Ga0070675_100141404 3300005354 Bacteria 2057
18 Ga0070675_100284542 3300005354 Archaea 1454
19 Ga0070675_100613208 3300005354 Archaea 987
20 Ga0070671_100325133 3300005355 Bacteria 1311
21 Ga0070674_100045980 3300005356 Bacteria 2984
22 Ga0070674_100099195 3300005356 Bacteria 2118
23 Ga0070673_100015699 3300005364 Bacteria 5328
24 Ga0070667_100069095 3300005367 Bacteria 3006
25 Ga0070713_100032878 3300005436 Bacteria 4149
26 Ga0070705_100049049 3300005440 Bacteria 2449
27 Ga0070708_100242619 3300005445 Bacteria 1692
28 Ga0070708_100244758 3300005445 Bacteria 1684
29 Ga0070678_100144305 3300005456 Bacteria 1909
30 Ga0070662_100046580 3300005457 Bacteria 3116
31 Ga0070706_100096791 3300005467 Bacteria 2740
32 Ga0070706_100241526 3300005467 Bacteria 1686
33 Ga0070707_100050057 3300005468 Bacteria 4005
34 Ga0070707_100076953 3300005468 Bacteria 3219
35 Ga0070698_100086711 3300005471 Unclassified 3117
36 Ga0070698_100125777 3300005471 Bacteria 2521
37 Ga0070699_100098261 3300005518 Bacteria 2565
38 Ga0070697_100001140 3300005536 Bacteria 20112
39 Ga0070697_100009331 3300005536 Bacteria 7671
40 Ga0070697_100015225 3300005536 Bacteria 6037
41 Ga0070697_100026788 3300005536 Bacteria 4609
42 Ga0070697_100249061 3300005536 Unclassified 1519
43 Ga0070697_100317375 3300005536 Bacteria 1341
44 Ga0068853_100525409 3300005539 Bacteria 1119
45 Ga0070672_100072550 3300005543 Bacteria 2741
46 Ga0070672_100130803 3300005543 Bacteria 2062
47 Ga0070672_100174213 3300005543 Bacteria 1790
48 Ga0070665_100081926 3300005548 Bacteria 3232
49 Ga0070664_100369715 3300005564 Bacteria 1307
50 Ga0070664_100372786 3300005564 Bacteria 1301
51 Ga0068866_10030758 3300005718 Bacteria 2580
52 Ga0068863_100106999 3300005841 Bacteria 2661
53 Ga0068862_100672311 3300005844 Bacteria 1001
54 Ga0081538_10020994 3300005981 Bacteria 4787
55 Ga0081539_10000965 3300005985 Bacteria 53746
56 Ga0070717_10003528 3300006028 Bacteria 11213
57 Ga0070716_100181442 3300006173 Bacteria 1382
58 Ga0097621_100069303 3300006237 Bacteria 2912
59 Ga0097621_100314517 3300006237 Bacteria 1386
60 Ga0068871_100016108 3300006358 Bacteria 5617
61 Ga0075434_100127764 3300006871 Bacteria 2559
62 Ga0075434_100429171 3300006871 Bacteria 1343
63 Ga0075436_100117382 3300006914 Unclassified 1860
64 Ga0099795_10088710 3300007788 Bacteria 1196
65 Ga0105251_10001659 3300009011 Bacteria 18803
66 Ga0105250_10038885 3300009092 Bacteria 1908
67 Ga0105245_10031799 3300009098 Bacteria 4672
68 Ga0105245_10299785 3300009098 Bacteria 1577
69 Ga0105247_10629510 3300009101 Bacteria 799
70 Ga0105243_10012090 3300009148 Bacteria 6525
71 Ga0105028_102266 3300009993 Bacteria 2016
72 Ga0099796_10012843 3300010159 Bacteria 2377
73 Ga0105246_10054089 3300011119 Bacteria 2765
74 Ga0157374_10027206 3300013296 Bacteria 5155
75 Ga0157374_10115113 3300013296 Unclassified 2590
76 Ga0157374_10210974 3300013296 Bacteria 1904
77 Ga0157374_10465179 3300013296 Bacteria 1267
78 Ga0157378_10014571 3300013297 Bacteria 6884
79 Ga0157378_10043088 3300013297 Bacteria 4007
80 Ga0157378_10856884 3300013297 Unclassified 937
81 Ga0157372_10273680 3300013307 Bacteria 1962
82 Ga0157372_10384641 3300013307 Bacteria 1635
83 Ga0157372_10527881 3300013307 Bacteria 1376
84 Ga0157375_10048449 3300013308 Bacteria 4157
85 Ga0157375_10279140 3300013308 Bacteria 1834
86 Ga0157377_10010785 3300014745 Bacteria 4535
87 Ga0157376_10114156 3300014969 Bacteria 2383
88 Ga0209566_100077 3300025225 Bacteria 160414
89 Ga0209147_100322 3300025229 Bacteria 36569
90 Ga0209258_101056 3300025242 Bacteria 12057
91 Ga0207666_1013545 3300025271 Bacteria 1146
92 Ga0209673_1003390 3300025273 Bacteria 9460
93 Ga0209025_1010316 3300025294 Bacteria 6346
94 Ga0209025_1010894 3300025294 Bacteria 6089
95 Ga0209025_1018979 3300025294 Bacteria 3854
96 Ga0207426_1007280 3300025302 Bacteria 4657
97 Ga0207697_10000853 3300025315 Bacteria 17252
98 Ga0207697_10002063 3300025315 Bacteria 10584
99 Ga0207696_1003194 3300025711 Bacteria 7579
100 Ga0207655_1016050 3300025728 Bacteria 4122
101 Ga0207713_1000818 3300025735 Bacteria 28795
102 Ga0207713_1001667 3300025735 Bacteria 17206
103 Ga0207688_10027083 3300025901 Bacteria 3153
104 Ga0207688_10045990 3300025901 Bacteria 2436
105 Ga0207680_10059796 3300025903 Bacteria 2316
106 Ga0207645_10003903 3300025907 Bacteria 11144
107 Ga0207645_10020627 3300025907 Bacteria 4310
108 Ga0207684_10000292 3300025910 Bacteria 71954
109 Ga0207684_10113715 3300025910 Bacteria 2317
110 Ga0207684_10137249 3300025910 Bacteria 2101
111 Ga0207663_10042882 3300025916 Bacteria 2766
112 Ga0207663_10355414 3300025916 Archaea 1110
113 Ga0207649_10033791 3300025920 Bacteria 3059
114 Ga0207646_10031568 3300025922 Bacteria 4796
115 Ga0207646_10057561 3300025922 Bacteria 3473
116 Ga0207646_10181711 3300025922 Bacteria 1900
117 Ga0207650_10243426 3300025925 Bacteria 1454
118 Ga0207659_10028408 3300025926 Bacteria 3801
119 Ga0207659_10049056 3300025926 Bacteria 2993
120 Ga0207700_10063999 3300025928 Bacteria 2800
121 Ga0207700_10283561 3300025928 Bacteria 1426
122 Ga0207644_10346239 3300025931 Bacteria 1206
123 Ga0207706_10030098 3300025933 Bacteria 4845
124 Ga0207686_10251914 3300025934 Archaea 1290
125 Ga0207665_10032256 3300025939 Bacteria 3468
126 Ga0207665_10285479 3300025939 Bacteria 1229
127 Ga0207691_10007809 3300025940 Bacteria 10301
128 Ga0207691_10083492 3300025940 Bacteria 2868
129 Ga0207651_10182104 3300025960 Bacteria 1667
130 Ga0207651_10426179 3300025960 Bacteria 1134
131 Ga0207668_10136801 3300025972 Bacteria 1878
132 Ga0207639_10387031 3300026041 Bacteria 1257
133 Ga0207702_10231972 3300026078 Bacteria 1725
134 Ga0207641_10106098 3300026088 Bacteria 2483
135 Ga0207648_10120704 3300026089 Bacteria 2305
136 Ga0207683_10011269 3300026121 Bacteria 7622
137 Ga0207683_10026267 3300026121 Bacteria 5026
138 Ga0207683_10192970 3300026121 Bacteria 1850
139 Ga0209371_1003393 3300027312 Bacteria 7802
140 Ga0209974_10116143 3300027876 Bacteria 945
141 Ga0268266_10015009 3300028379 Bacteria 6650
142 Ga0307515_10050633 3300028794 Bacteria 6214
143 Ga0268256_1001567 3300030500 Bacteria 13410
144 Ga0307408_100041330 3300031548 Bacteria 3269
145 Ga0307409_100662380 3300031995 Bacteria 1039
146 Ga0307416_100273893 3300032002 Bacteria 1659
147 Ga0307416_100418965 3300032002 Bacteria 1382
148 Ga0373943_0148276 3300035170 Bacteria 1269
149 Ga0373942_0067663 3300035207 Bacteria 1036
150 Ga0373931_0099336 3300035691 Bacteria 1635
151 Ga0373935_0023423 3300035692 Bacteria 3796
152 Ga0373935_0162790 3300035692 Bacteria 1522
153 Ga0373927_0142216 3300035695 Bacteria 1570
154 Ga0373947_0132446 3300035725 Unclassified 1593
155 Ga0395898_0049750 3300037466 Bacteria 4106
156 Ga0436364_0699781 3300037853 Bacteria 1727
157 Ga0395901_0188164 3300038443 Bacteria 2165
158 Ga0495651_0012364 3300046462 Bacteria 6580
159 Ga0495580_0340027 3300046472 Bacteria 1018
160 Ga0495585_0006027 3300046492 Bacteria 7587
161 Ga0495652_0037933 3300046529 Unclassified 4178
162 Ga0495598_0020205 3300046537 Bacteria 1756
163 Ga0495661_0126316 3300046665 Bacteria 1407
164 Ga0495661_0162802 3300046665 Bacteria 1196
165 Ga0495661_0250654 3300046665 Bacteria 904
166 Ga0495658_0049793 3300046683 Bacteria 2367
167 Ga0495669_0053498 3300046684 Bacteria 1815
168 Ga0495649_0121711 3300046694 Bacteria 1380
169 Ga0495676_0045566 3300047321 Bacteria 3569
170 Ga0495683_0010433 3300047323 Bacteria 4911
171 Ga0495684_0065880 3300047471 Unclassified 2754
172 Ga0495614_0217031 3300048089 Bacteria 869
173 Ga0496100_0012704 3300048903 Bacteria 4837
174 Ga0496100_0038164 3300048903 Bacteria 3042
175 Ga0496101_0089689 3300048904 Bacteria 2285
176 Ga0496101_0464507 3300048904 Bacteria 999
177 Ga0496102_0006929 3300048905 Bacteria 9669
178 Ga0496102_0080422 3300048905 Bacteria 3002
179 Ga0496103_0005304 3300048906 Bacteria 7732
180 Ga0496104_0020832 3300048907 Bacteria 6013
181 Ga0496104_0038732 3300048907 Bacteria 4462
182 Ga0496105_0000152 3300048908 Bacteria 45875
183 Ga0496105_0122677 3300048908 Bacteria 2142
184 Ga0496106_0000683 3300048909 Bacteria 24323
185 Ga0496106_0019146 3300048909 Bacteria 5075
186 Ga0496107_0000212 3300048910 Bacteria 30625
187 Ga0496107_0094690 3300048910 Bacteria 2184
188 Ga0496108_0001731 3300048911 Bacteria 17330
189 Ga0496108_0079356 3300048911 Bacteria 2779
190 Ga0496108_0112060 3300048911 Bacteria 2334
191 Ga0496109_0015968 3300048912 Bacteria 6559
192 Ga0496109_0039666 3300048912 Unclassified 4263
193 Ga0496109_0066979 3300048912 Bacteria 3289
194 Ga0496110_0004853 3300048913 Bacteria 10485
195 Ga0496110_0009599 3300048913 Bacteria 7830
196 Ga0496111_0000397 3300048914 Bacteria 21803
197 Ga0496111_0038859 3300048914 Bacteria 3410
198 Ga0496112_0002394 3300048915 Bacteria 15081
199 Ga0496112_0190600 3300048915 Bacteria 2012
200 Ga0496112_0541967 3300048915 Bacteria 1098
201 Ga0496112_0644933 3300048915 Bacteria 989
202 Ga0496113_0006767 3300048916 Bacteria 7308
203 Ga0496113_0222106 3300048916 Bacteria 1506
204 Ga0496114_0022081 3300048917 Bacteria 5183
205 Ga0496114_0083496 3300048917 Bacteria 2703
206 Ga0496114_0648183 3300048917 Archaea 929
207 Ga0496115_0012825 3300048918 Bacteria 6319
208 Ga0496115_0049961 3300048918 Bacteria 3349
209 Ga0496115_0059657 3300048918 Bacteria 3073
210 Ga0496116_0004954 3300048919 Bacteria 12544
211 Ga0496119_0020255 3300048922 Bacteria 4858
212 Ga0496120_0063207 3300048923 Bacteria 2060
213 Ga0496121_0142241 3300048924 Bacteria 1778
214 Ga0496122_0005342 3300048925 Bacteria 15357
215 Ga0496123_0064825 3300048926 Bacteria 2326
216 Ga0496124_0038400 3300048927 Bacteria 4159
217 Ga0496125_0002879 3300048928 Bacteria 21662
218 Ga0496126_0009872 3300048929 Bacteria 10099
219 Ga0501306_000247 3300049127 Unclassified 3735
220 Ga0501309_005293 3300049129 Bacteria 1534
221 Ga0501310_016884 3300049130 Bacteria 879
222 Ga0501305_005970 3300049161 Bacteria 1497
223 Ga0501305_010129 3300049161 Bacteria 1253
224 Ga0501305_020280 3300049161 Bacteria 976
225 Ga0501312_020271 3300049528 Bacteria 983
226 Ga0501312_024066 3300049528 Bacteria 921
227 Ga0501037_0119368 3300049573 Bacteria 1897
228 Ga0501040_0436068 3300049576 Bacteria 942
229 Ga0501043_0309033 3300049579 Bacteria 1207
230 Ga0501046_0166403 3300049580 Bacteria 1656
231 Ga0501047_0114078 3300049581 Unclassified 2584
232 Ga0501071_0028582 3300049587 Bacteria 3931
233 Ga0501072_0108527 3300049588 Bacteria 2208
234 Ga0501077_0038332 3300049593 Bacteria 3051
235 Ga0501208_011980 3300049655 Bacteria 1264
236 Ga0501217_013014 3300049661 Bacteria 1861
237 Ga0501035_0039438 3300049822 Bacteria 4274
238 nmdc:mga0n895_211820_c1 3300050512 Bacteria 1968
239 nmdc:mga0n895_223504_c1 3300050512 Bacteria 1911
240 2644718178 2643221731 Bacteria 5623886
241 2644725063 2643221732 Bacteria 5756404
242 2672333927 2671180330 Bacteria 5521719
243 2739233723 2738543010 Bacteria 5583595
244 2816866056 2816332186 Bacteria 5331395
245 2819567862 2818991441 Bacteria 5062707
246 2819707320 2818991465 Bacteria 5388835
247 2842686142 2842682962 Bacteria 5589973
248 2842882361 2842882022 Bacteria 6158489
249 2849141838 2849139964 Bacteria 5613304
250 2857453414 2857453340 Bacteria 8090534
251 2857585305 2857581216 Bacteria 5522813
252 2904118878 2904113452 Bacteria 7796941
253 2904526974 2904524088 Bacteria 5887454
254 2919144435 2919143609 Bacteria 6219228
255 2919519626 2919517244 Bacteria 5858162
256 2919720759 2919720352 Bacteria 5986006
257 2928095488 2928093941 Bacteria 5965005
258 2928512302 2928510474 Bacteria 4815308
259 2929008780 2929004312 Bacteria 5678476
260 2956897948 2956897341 Bacteria 5447711
261 2960325146 2960319331 Bacteria 5502575
262 2960377308 2960375949 Bacteria 5361395
263 3001271239 3001267043 Bacteria 4823521
264 3001272137 3001272096 Bacteria 4729684
265 3006969661 3006969106 Bacteria 4739423
266 3006977473 3006973921 Bacteria 4423788
267 3006988079 3006984091 Bacteria 4207523
268 3006992697 3006988479 Bacteria 4767936
269 8022897083 8022893055 Bacteria 5300455
270 8022920106 8022914991 Bacteria 5584517
271 8054284738 8054280661 Bacteria 4232245
272 8056537749 8056533031 Bacteria 8964429
273 Ga0070706_100000218
274 JGI25151J46595_10051008
275 rootH1_10005221
276 rootL2_10221454
277 Ga0006562J51391_1004339
278 Ga0055528_1008775
279 Ga0055541_1000515
280 Ga0070676_10028758
281 Ga0070670_100082331
282 Ga0070666_10089511
283 Ga0068868_100477629
284 Ga0070661_100057317
285 Ga0070668_100081645
286 Ga0070668_100191644
287 Ga0070675_100027537
288 Ga0070675_100124267
289 Ga0070675_100141404
290 Ga0070675_100284542
291 Ga0070675_100613208
292 Ga0070671_100325133
293 Ga0070674_100045980
294 Ga0070674_100099195
295 Ga0070673_100015699
296 Ga0070667_100069095
297 Ga0070713_100032878
298 Ga0070705_100049049
299 Ga0070708_100242619
300 Ga0070708_100244758
301 Ga0070678_100144305
302 Ga0070662_100046580
303 Ga0070706_100096791
304 Ga0070706_100241526
305 Ga0070707_100050057
306 Ga0070707_100076953
307 Ga0070698_100086711
308 Ga0070698_100125777
309 Ga0070699_100098261
310 Ga0070697_100001140
311 Ga0070697_100009331
312 Ga0070697_100015225
313 Ga0070697_100026788
314 Ga0070697_100249061
315 Ga0070697_100317375
316 Ga0068853_100525409
317 Ga0070672_100072550
318 Ga0070672_100130803
319 Ga0070672_100174213
320 Ga0070665_100081926
321 Ga0070664_100369715
322 Ga0070664_100372786
323 Ga0068866_10030758
324 Ga0068863_100106999
325 Ga0068862_100672311
326 Ga0081538_10020994
327 Ga0081539_10000965
328 Ga0070717_10003528
329 Ga0070716_100181442
330 Ga0097621_100069303
331 Ga0097621_100314517
332 Ga0068871_100016108
333 Ga0075434_100127764
334 Ga0075434_100429171
335 Ga0075436_100117382
336 Ga0099795_10088710
337 Ga0105251_10001659
338 Ga0105250_10038885
339 Ga0105245_10031799
340 Ga0105245_10299785
341 Ga0105247_10629510
342 Ga0105243_10012090
343 Ga0105028_102266
344 Ga0099796_10012843
345 Ga0105246_10054089
346 Ga0157374_10027206
347 Ga0157374_10115113
348 Ga0157374_10210974
349 Ga0157374_10465179
350 Ga0157378_10014571
351 Ga0157378_10043088
352 Ga0157378_10856884
353 Ga0157372_10273680
354 Ga0157372_10384641
355 Ga0157372_10527881
356 Ga0157375_10048449
357 Ga0157375_10279140
358 Ga0157377_10010785
359 Ga0157376_10114156
360 Ga0209566_100077
361 Ga0209147_100322
362 Ga0209258_101056
363 Ga0207666_1013545
364 Ga0209673_1003390
365 Ga0209025_1010316
366 Ga0209025_1010894
367 Ga0209025_1018979
368 Ga0207426_1007280
369 Ga0207697_10000853
370 Ga0207697_10002063
371 Ga0207696_1003194
372 Ga0207655_1016050
373 Ga0207713_1000818
374 Ga0207713_1001667
375 Ga0207688_10027083
376 Ga0207688_10045990
377 Ga0207680_10059796
378 Ga0207645_10003903
379 Ga0207645_10020627
380 Ga0207684_10000292
381 Ga0207684_10113715
382 Ga0207684_10137249
383 Ga0207663_10042882
384 Ga0207663_10355414
385 Ga0207649_10033791
386 Ga0207646_10031568
387 Ga0207646_10057561
388 Ga0207646_10181711
389 Ga0207650_10243426
390 Ga0207659_10028408
391 Ga0207659_10049056
392 Ga0207700_10063999
393 Ga0207700_10283561
394 Ga0207644_10346239
395 Ga0207706_10030098
396 Ga0207686_10251914
397 Ga0207665_10032256
398 Ga0207665_10285479
399 Ga0207691_10007809
400 Ga0207691_10083492
401 Ga0207651_10182104
402 Ga0207651_10426179
403 Ga0207668_10136801
404 Ga0207639_10387031
405 Ga0207702_10231972
406 Ga0207641_10106098
407 Ga0207648_10120704
408 Ga0207683_10011269
409 Ga0207683_10026267
410 Ga0207683_10192970
411 Ga0209371_1003393
412 Ga0209974_10116143
413 Ga0268266_10015009
414 Ga0307515_10050633
415 Ga0268256_1001567
416 Ga0307408_100041330
417 Ga0307409_100662380
418 Ga0307416_100273893
419 Ga0307416_100418965
420 Ga0373943_0148276
421 Ga0373942_0067663
422 Ga0373931_0099336
423 Ga0373935_0023423
424 Ga0373935_0162790
425 Ga0373927_0142216
426 Ga0373947_0132446
427 Ga0395898_0049750
428 Ga0436364_0699781
429 Ga0395901_0188164
430 Ga0495651_0012364
431 Ga0495580_0340027
432 Ga0495585_0006027
433 Ga0495652_0037933
434 Ga0495598_0020205
435 Ga0495661_0126316
436 Ga0495661_0162802
437 Ga0495661_0250654
438 Ga0495658_0049793
439 Ga0495669_0053498
440 Ga0495649_0121711
441 Ga0495676_0045566
442 Ga0495683_0010433
443 Ga0495684_0065880
444 Ga0495614_0217031
445 Ga0496100_0012704
446 Ga0496100_0038164
447 Ga0496101_0089689
448 Ga0496101_0464507
449 Ga0496102_0006929
450 Ga0496102_0080422
451 Ga0496103_0005304
452 Ga0496104_0020832
453 Ga0496104_0038732
454 Ga0496105_0000152
455 Ga0496105_0122677
456 Ga0496106_0000683
457 Ga0496106_0019146
458 Ga0496107_0000212
459 Ga0496107_0094690
460 Ga0496108_0001731
461 Ga0496108_0079356
462 Ga0496108_0112060
463 Ga0496109_0015968
464 Ga0496109_0039666
465 Ga0496109_0066979
466 Ga0496110_0004853
467 Ga0496110_0009599
468 Ga0496111_0000397
469 Ga0496111_0038859
470 Ga0496112_0002394
471 Ga0496112_0190600
472 Ga0496112_0541967
473 Ga0496112_0644933
474 Ga0496113_0006767
475 Ga0496113_0222106
476 Ga0496114_0022081
477 Ga0496114_0083496
478 Ga0496114_0648183
479 Ga0496115_0012825
480 Ga0496115_0049961
481 Ga0496115_0059657
482 Ga0496116_0004954
483 Ga0496119_0020255
484 Ga0496120_0063207
485 Ga0496121_0142241
486 Ga0496122_0005342
487 Ga0496123_0064825
488 Ga0496124_0038400
489 Ga0496125_0002879
490 Ga0496126_0009872
491 Ga0501306_000247
492 Ga0501309_005293
493 Ga0501310_016884
494 Ga0501305_005970
495 Ga0501305_010129
496 Ga0501305_020280
497 Ga0501312_020271
498 Ga0501312_024066
499 Ga0501037_0119368
500 Ga0501040_0436068
501 Ga0501043_0309033
502 Ga0501046_0166403
503 Ga0501047_0114078
504 Ga0501071_0028582
505 Ga0501072_0108527
506 Ga0501077_0038332
507 Ga0501208_011980
508 Ga0501217_013014
509 Ga0501035_0039438
510 nmdc:mga0n895_211820_c1
511 nmdc:mga0n895_223504_c1
512 2644718178
513 2644725063
514 2672333927
515 2739233723
516 2816866056
517 2819567862
518 2819707320
519 2842686142
520 2842882361
521 2849141838
522 2857453414
523 2857585305
524 2904118878
525 2904526974
526 2919144435
527 2919519626
528 2919720759
529 2928095488
530 2928512302
531 2929008780
532 2956897948
533 2960325146
534 2960377308
535 3001271239
536 3001272137
537 3006969661
538 3006977473
539 3006988079
540 3006992697
541 8022897083
542 8022920106
543 8054284738
544 8056537749

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06283

ThuA

Trehalose utilisation

6

260

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1t0b-assembly2.cif.gz_E structure of thua-like protein from bacillus stearothermophilus 0.9516 2 237
1t0b-assembly2.cif.gz_E structure of thua-like protein from bacillus stearothermophilus 0.9322 2 237
4pxy-assembly1.cif.gz_A crystal structure of a putative thua-like protein (bacuni_01602) from bacteroides uniformis atcc 8492 at 1.50 a resolution 0.7218 2 217
3rht-assembly2.cif.gz_C crystal structure of type 1 glutamine amidotransferase (gatase1)-like protein from planctomyces limnophilus 0.7206 4 218
2a9v-assembly1.cif.gz_A crystal structure of a putative gmp synthase subunit a protein (ta0944m) from thermoplasma acidophilum at 2.45 a resolution 0.7191 1 216
ID Description Score Start End Superfamily
1t0bA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9517 2 237 3.40.50.880
1t0bA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.9323 2 237 3.40.50.880
af_Q2G099_1_189_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7219 4 216 3.40.50.880
2a9vA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7141 1 216 3.40.50.880
af_Q2G099_1_189_3.40.50.880 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Class I glutamine amidotransferase (GATase) domain 0.7123 4 216 3.40.50.880
ID Description Score Start End GO Terms
AF-A0A3D1P8E1-F1-model_v4 Trehalose utilization protein ThuA 0.9976 13 110
AF-A0A7V6H6J2-F1-model_v4 Trehalose utilization protein ThuA 0.9962 2 197
AF-A0A0M4G2C7-F1-model_v4 PalA 0.9957 2 218
AF-A0A8B5NPX9-F1-model_v4 deleted 0.9952 1 211
AF-A0A6M1RZP3-F1-model_v4 Trehalose utilization protein ThuA 0.9949 1 221

Map