F377263

General Info

Members Datasets Scaffolds Average Seq Length
270 160 269 316

Family's Representative Sequence

Representative Sequence 3300049822|Ga0501035_0040354|Ga0501035_0040354_2349_3476
Length 375
Sequence LTRRSAPPLGFERKDRVWMRPRSRPARNSACEGQGGCYDFATIHPPISAGFLFLTGSNHFIVKIFSGTANEPLARAICKSVGCELGKCNITPFPDGETFVKIEENVRGEDIFIIQPTSPPTNHNLMELFIMIDALRRASAKRITAVMPFYGYARQDRKDQPRVPITAKLVANLLVAAGASRVLTMDLHAQQIQGFFDIPVDHLYAAPVMYEYLKKKNLTNLVVVSPDAGGIKMAHAYSQTLETELAIVAKRRKSATEVESMAVIGDIEGKNVLLVDDLTETAGTLTSAAAVLKTKGAKNVLACVSHALLNDTGIERLRNSAIDELITTDTVQRPAIDGVKITTLSVAGLLGEAIKRIHSNSSVNSLFEFKGGRTS

Samples

Sample ID Description Type Environment
1 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
2 3300000545 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNX_Illumina_Assembled Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
33 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
34 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
49 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
50 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
51 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
73 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
74 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
75 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
76 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
77 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
78 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
79 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
80 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
81 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
82 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
83 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
93 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
94 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
95 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
96 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
97 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
98 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
99 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
100 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
101 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
102 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
105 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
106 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
108 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
119 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
122 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
123 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
124 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
125 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
128 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
129 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
133 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
134 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
135 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
143 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
144 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
145 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
146 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
151 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0
Isolates 0.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.96
Nodule 0
Rhizoplane 0.74
Rhizosphere 92.59
Stem 0
Stem Tuber 0
Unclassified 3.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNXas_1001639 3300000545 Bacteria 1506
2 rootH2_10066373 3300003320 Bacteria 1722
3 Ga0070690_100006168 3300005330 Bacteria 6794
4 Ga0070690_100120804 3300005330 Bacteria 1758
5 Ga0070677_10124848 3300005333 Bacteria 1167
6 Ga0070660_100168497 3300005339 Bacteria 1768
7 Ga0070691_10058423 3300005341 Bacteria 1852
8 Ga0070688_100182913 3300005365 Bacteria 1455
9 Ga0070709_10020438 3300005434 Bacteria 3841
10 Ga0070701_10002361 3300005438 Bacteria 7251
11 Ga0070711_100006288 3300005439 Bacteria 7151
12 Ga0070705_100015074 3300005440 Bacteria 3989
13 Ga0070708_100123434 3300005445 Bacteria 2391
14 Ga0070681_10026491 3300005458 Bacteria 5826
15 Ga0070706_100083764 3300005467 Bacteria 2955
16 Ga0070707_100130117 3300005468 Bacteria 2447
17 Ga0070698_100001630 3300005471 Bacteria 24982
18 Ga0070698_100015013 3300005471 Bacteria 8188
19 Ga0070699_100008580 3300005518 Bacteria 8857
20 Ga0070699_100077414 3300005518 Bacteria 2895
21 Ga0070679_100040024 3300005530 Bacteria 4662
22 Ga0070684_100290224 3300005535 Bacteria 1500
23 Ga0070697_100018459 3300005536 Bacteria 5499
24 Ga0070697_100166381 3300005536 Bacteria 1865
25 Ga0068853_100000007 3300005539 Bacteria 283307
26 Ga0068853_100116746 3300005539 Unclassified 2376
27 Ga0070686_100013263 3300005544 Bacteria 4714
28 Ga0070693_100081808 3300005547 Unclassified 1927
29 Ga0070665_100000027 3300005548 Bacteria 359314
30 Ga0070704_100055595 3300005549 Bacteria 2807
31 Ga0068855_100015729 3300005563 Bacteria 9102
32 Ga0068855_100063676 3300005563 Bacteria 4303
33 Ga0068855_100082910 3300005563 Unclassified 3715
34 Ga0068855_100270410 3300005563 Bacteria 1890
35 Ga0068857_100001576 3300005577 Bacteria 18267
36 Ga0068857_100074410 3300005577 Unclassified 3026
37 Ga0068856_100252931 3300005614 Bacteria 1777
38 Ga0068859_100002866 3300005617 Bacteria 17499
39 Ga0068858_100175139 3300005842 Bacteria 2024
40 Ga0070717_10010887 3300006028 Bacteria 6885
41 Ga0070717_10024065 3300006028 Bacteria 4833
42 Ga0070712_100266314 3300006175 Bacteria 1375
43 Ga0075366_10003949 3300006195 Bacteria 7910
44 Ga0097621_100008410 3300006237 Bacteria 7430
45 Ga0097620_100002866 3300006931 Bacteria 17499
46 Ga0097620_100551346 3300006931 Bacteria 1247
47 Ga0105240_10000018 3300009093 Bacteria 434461
48 Ga0105240_10007108 3300009093 Bacteria 16313
49 Ga0105240_10177322 3300009093 Bacteria 2519
50 Ga0105240_10466150 3300009093 Unclassified 1410
51 Ga0111539_10180653 3300009094 Bacteria 2464
52 Ga0111539_10189932 3300009094 Bacteria 2397
53 Ga0111539_10362077 3300009094 Bacteria 1688
54 Ga0105245_10295474 3300009098 Bacteria 1588
55 Ga0105241_10077274 3300009174 Unclassified 2598
56 Ga0105237_10614828 3300009545 Unclassified 1093
57 Ga0105238_10096030 3300009551 Unclassified 2950
58 Ga0105239_10185287 3300010375 Unclassified 2329
59 Ga0157374_10566780 3300013296 Bacteria 1144
60 Ga0163162_10498768 3300013306 Bacteria 1348
61 Ga0157372_10370994 3300013307 Bacteria 1668
62 Ga0157372_10839070 3300013307 Bacteria 1067
63 Ga0157375_10340093 3300013308 Bacteria 1666
64 Ga0163163_10000049 3300014325 Bacteria 130036
65 Ga0163163_10361014 3300014325 Bacteria 1509
66 Ga0213872_10000719 3300021361 Bacteria 24811
67 Ga0213872_10007148 3300021361 Bacteria 5519
68 Ga0213872_10059047 3300021361 Bacteria 1736
69 Ga0213874_10013193 3300021377 Bacteria 2135
70 Ga0213876_10001327 3300021384 Bacteria 15534
71 Ga0213876_10001497 3300021384 Bacteria 14493
72 Ga0207705_10249469 3300025909 Bacteria 1353
73 Ga0207684_10406231 3300025910 Bacteria 1171
74 Ga0207695_10000415 3300025913 Bacteria 94965
75 Ga0207695_10084638 3300025913 Bacteria 3201
76 Ga0207695_10265500 3300025913 Unclassified 1613
77 Ga0207695_10349159 3300025913 Bacteria 1367
78 Ga0207671_10008726 3300025914 Bacteria 8543
79 Ga0207671_10333538 3300025914 Unclassified 1201
80 Ga0207657_10109130 3300025919 Bacteria 2287
81 Ga0207657_10271221 3300025919 Bacteria 1349
82 Ga0207652_10302260 3300025921 Bacteria 1444
83 Ga0207646_10083149 3300025922 Bacteria 2863
84 Ga0207694_10068441 3300025924 Bacteria 2772
85 Ga0207694_10337983 3300025924 Bacteria 1245
86 Ga0207700_10071337 3300025928 Bacteria 2674
87 Ga0207670_10065620 3300025936 Bacteria 2491
88 Ga0207670_10254099 3300025936 Bacteria 1360
89 Ga0207667_10012899 3300025949 Bacteria 9601
90 Ga0207667_10075933 3300025949 Bacteria 3488
91 Ga0207667_10103832 3300025949 Bacteria 2931
92 Ga0207712_10087374 3300025961 Bacteria 2286
93 Ga0207677_10053733 3300026023 Bacteria 2744
94 Ga0207703_10159947 3300026035 Bacteria 1972
95 Ga0207639_10000001 3300026041 Bacteria 1431562
96 Ga0207639_10244790 3300026041 Unclassified 1561
97 Ga0207702_10002117 3300026078 Bacteria 19113
98 Ga0207702_10040485 3300026078 Bacteria 3906
99 Ga0207641_10122234 3300026088 Bacteria 2325
100 Ga0207674_10012192 3300026116 Bacteria 9616
101 Ga0207674_10080911 3300026116 Unclassified 3251
102 Ga0268266_10000050 3300028379 Bacteria 302778
103 Ga0265337_1000409 3300028556 Bacteria 22991
104 Ga0265337_1000849 3300028556 Bacteria 16012
105 Ga0265337_1003671 3300028556 Bacteria 6573
106 Ga0265337_1006392 3300028556 Bacteria 4552
107 Ga0265337_1013104 3300028556 Bacteria 2798
108 Ga0265326_10009085 3300028558 Bacteria 2978
109 Ga0265326_10019033 3300028558 Bacteria 1975
110 Ga0265319_1000372 3300028563 Bacteria 32397
111 Ga0265319_1008240 3300028563 Bacteria 4589
112 Ga0265334_10007242 3300028573 Bacteria 4758
113 Ga0265323_10009766 3300028653 Bacteria 3908
114 Ga0265336_10000836 3300028666 Bacteria 16045
115 Ga0265338_10000041 3300028800 Bacteria 230676
116 Ga0265338_10000452 3300028800 Bacteria 73214
117 Ga0265338_10001224 3300028800 Bacteria 42394
118 Ga0265338_10001733 3300028800 Bacteria 34498
119 Ga0265338_10002101 3300028800 Bacteria 30750
120 Ga0265338_10007264 3300028800 Bacteria 13825
121 Ga0265338_10011378 3300028800 Bacteria 10287
122 Ga0265338_10020032 3300028800 Bacteria 7056
123 Ga0265338_10020565 3300028800 Bacteria 6938
124 Ga0265338_10022110 3300028800 Bacteria 6604
125 Ga0265338_10024830 3300028800 Bacteria 6108
126 Ga0265338_10068064 3300028800 Bacteria 3071
127 Ga0265338_10073082 3300028800 Bacteria 2924
128 Ga0265338_10087864 3300028800 Bacteria 2581
129 Ga0265338_10098904 3300028800 Bacteria 2385
130 Ga0265324_10009322 3300029957 Bacteria 3839
131 Ga0307511_10000223 3300030521 Bacteria 57417
132 Ga0265328_10041198 3300031239 Bacteria 1701
133 Ga0265320_10000666 3300031240 Bacteria 26164
134 Ga0265320_10002788 3300031240 Bacteria 12039
135 Ga0265320_10016284 3300031240 Bacteria 4171
136 Ga0265320_10027935 3300031240 Bacteria 2934
137 Ga0265320_10084200 3300031240 Bacteria 1481
138 Ga0265325_10044334 3300031241 Bacteria 2316
139 Ga0265325_10048771 3300031241 Bacteria 2187
140 Ga0265340_10014866 3300031247 Bacteria 4053
141 Ga0265340_10033649 3300031247 Bacteria 2551
142 Ga0265340_10065263 3300031247 Bacteria 1734
143 Ga0265340_10159388 3300031247 Bacteria 1026
144 Ga0265339_10020591 3300031249 Bacteria 3850
145 Ga0265327_10001858 3300031251 Bacteria 24482
146 Ga0265327_10001949 3300031251 Bacteria 23709
147 Ga0265327_10011483 3300031251 Bacteria 6090
148 Ga0265316_10007969 3300031344 Bacteria 9902
149 Ga0265316_10011373 3300031344 Bacteria 8033
150 Ga0265313_10003311 3300031595 Bacteria 13186
151 Ga0265313_10003545 3300031595 Bacteria 12577
152 Ga0265314_10011573 3300031711 Bacteria 7269
153 Ga0265314_10067523 3300031711 Bacteria 2408
154 Ga0265314_10074512 3300031711 Bacteria 2261
155 Ga0265314_10131573 3300031711 Bacteria 1560
156 Ga0265342_10006839 3300031712 Bacteria 8427
157 Ga0265342_10024370 3300031712 Bacteria 3821
158 Ga0307410_10187307 3300031852 Bacteria 1571
159 Ga0307412_10059151 3300031911 Bacteria 2567
160 Ga0373930_0000619 3300034816 Bacteria 4928
161 Ga0373928_0002625 3300035084 Bacteria 3483
162 Ga0373929_0002459 3300035085 Bacteria 3405
163 Ga0373940_0041296 3300035088 Bacteria 1268
164 Ga0373944_0001683 3300035089 Bacteria 5599
165 Ga0373949_0001697 3300035090 Bacteria 6121
166 Ga0373951_0009290 3300035091 Bacteria 2215
167 Ga0373932_0000002 3300035112 Bacteria 711821
168 Ga0373939_0042272 3300035114 Bacteria 1377
169 Ga0373953_0010423 3300035117 Bacteria 3234
170 Ga0373954_0008400 3300035118 Bacteria 4529
171 Ga0373946_0022319 3300035171 Bacteria 2463
172 Ga0373962_0000426 3300035242 Bacteria 9203
173 Ga0373931_0000012 3300035691 Bacteria 267735
174 Ga0373935_0004069 3300035692 Bacteria 8546
175 Ga0373935_0140991 3300035692 Bacteria 1628
176 Ga0373927_0013488 3300035695 Bacteria 5430
177 Ga0373927_0029709 3300035695 Unclassified 3564
178 Ga0373937_0060491 3300036401 Bacteria 3481
179 Ga0373925_0002892 3300037068 Bacteria 13564
180 Ga0373925_0039202 3300037068 Unclassified 3504
181 Ga0395900_0003983 3300037418 Bacteria 15769
182 Ga0395900_0031514 3300037418 Bacteria 5449
183 Ga0395898_0258847 3300037466 Bacteria 1659
184 Ga0395905_0016655 3300037471 Bacteria 6987
185 Ga0436364_0501020 3300037853 Bacteria 2955
186 Ga0395901_0003735 3300038443 Bacteria 15340
187 Ga0395901_0356858 3300038443 Bacteria 1508
188 Ga0436365_0189753 3300039437 Bacteria 17174
189 Ga0436365_0900697 3300039437 Bacteria 11984
190 Ga0436365_0972456 3300039437 Bacteria 3650
191 Ga0436360_0685729 3300039438 Bacteria 7176
192 Ga0436360_0737402 3300039438 Bacteria 3663
193 Ga0436360_0850874 3300039438 Bacteria 3496
194 Ga0436360_0904662 3300039438 Bacteria 3654
195 Ga0436361_0151752 3300039447 Bacteria 1168
196 Ga0436361_0207311 3300039447 Bacteria 5033
197 Ga0436361_0350933 3300039447 Bacteria 2203
198 Ga0436361_0414436 3300039447 Bacteria 2541
199 Ga0436361_0547481 3300039447 Bacteria 2314
200 Ga0436361_0738791 3300039447 Bacteria 1800
201 Ga0436361_1157696 3300039447 Bacteria 6657
202 Ga0436361_1220582 3300039447 Bacteria 3570
203 Ga0436363_1648880 3300039450 Bacteria 7035
204 Ga0436362_0972731 3300039453 Bacteria 3012
205 Ga0451577_0035196 3300042876 Bacteria 4511
206 Ga0453684_0002118 3300044712 Bacteria 50022
207 Ga0453684_0013422 3300044712 Bacteria 13304
208 Ga0453684_0019330 3300044712 Bacteria 10378
209 Ga0453684_0145038 3300044712 Bacteria 2829
210 Ga0451576_0003334 3300045051 Bacteria 22242
211 Ga0451576_0057024 3300045051 Bacteria 4084
212 Ga0451576_0068858 3300045051 Bacteria 3683
213 Ga0451576_0157041 3300045051 Unclassified 2373
214 Ga0451576_0493905 3300045051 Bacteria 1286
215 Ga0495592_0043302 3300046454 Bacteria 3368
216 Ga0495629_0058326 3300046459 Bacteria 2699
217 Ga0495618_0062418 3300046514 Bacteria 2364
218 Ga0495628_0090520 3300046516 Bacteria 2369
219 Ga0495630_0000210 3300046517 Bacteria 46241
220 Ga0495630_0042539 3300046517 Bacteria 3393
221 Ga0495630_0046256 3300046517 Bacteria 3253
222 Ga0495630_0064678 3300046517 Bacteria 2749
223 Ga0495666_0022427 3300046526 Bacteria 3126
224 Ga0495586_0000094 3300046535 Bacteria 54446
225 Ga0495586_0000920 3300046535 Bacteria 16752
226 Ga0495586_0006642 3300046535 Bacteria 6177
227 Ga0495586_0152452 3300046535 Unclassified 1301
228 Ga0495645_0107518 3300046543 Bacteria 1977
229 Ga0495622_0037216 3300046557 Bacteria 2267
230 Ga0495667_0081767 3300046559 Bacteria 2099
231 Ga0495667_0132477 3300046559 Bacteria 1608
232 Ga0495634_0023563 3300046642 Bacteria 4324
233 Ga0495599_0097846 3300046678 Bacteria 1829
234 Ga0495647_0009441 3300046681 Bacteria 3306
235 Ga0495658_0006101 3300046683 Bacteria 5918
236 Ga0495658_0025931 3300046683 Bacteria 3137
237 Ga0495658_0034969 3300046683 Bacteria 2760
238 Ga0495669_0048876 3300046684 Bacteria 1893
239 Ga0495613_0040244 3300046689 Unclassified 3464
240 Ga0495613_0100994 3300046689 Bacteria 2083
241 Ga0495674_0002905 3300047319 Bacteria 16677
242 Ga0495676_0057950 3300047321 Bacteria 3051
243 Ga0495680_0026908 3300047322 Bacteria 4734
244 Ga0495675_0112245 3300047444 Bacteria 1701
245 Ga0495684_0079777 3300047471 Bacteria 2485
246 Ga0495684_0080308 3300047471 Bacteria 2476
247 Ga0495614_0033841 3300048089 Bacteria 2198
248 Ga0496109_0338039 3300048912 Bacteria 1422
249 Ga0501031_0000012 3300049568 Bacteria 137943
250 Ga0501033_0001470 3300049570 Bacteria 20874
251 Ga0501033_0161512 3300049570 Unclassified 1613
252 Ga0501043_0075066 3300049579 Bacteria 2656
253 Ga0501047_0148895 3300049581 Bacteria 2217
254 Ga0501073_0228373 3300049589 Bacteria 1286
255 Ga0501080_0003167 3300049742 Bacteria 14500
256 Ga0501080_0047925 3300049742 Bacteria 3978
257 Ga0501035_0012569 3300049822 Bacteria 7823
258 Ga0501035_0040354 3300049822 Bacteria 4218
259 Ga0501044_0000024 3300049823 Bacteria 194302
260 Ga0501044_0029522 3300049823 Bacteria 5781
261 nmdc:mga03n38_54370_c1 3300050490 Bacteria 1799
262 nmdc:mga0k408_1746_c1 3300050493 Bacteria 11641
263 nmdc:mga08y16_241963_c1 3300050511 Bacteria 1865
264 nmdc:mga08y16_434721_c1 3300050511 Bacteria 1340
265 Ga0500555_000615 3300053103 Bacteria 13770
266 Ga0500556_0000457 3300053104 Bacteria 28911
267 Ga0500568_0023144 3300053139 Bacteria 2645
268 Ga0500616_0001063 3300053153 Bacteria 28865
269 Ga0500616_0006412 3300053153 Bacteria 7712

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005333 Ga0070677_10124848 Ga0070677_101248481 301
2 3300013307 Ga0157372_10839070 Ga0157372_108390701 303
3 3300046559 Ga0495667_0132477 Ga0495667_0132477_673_1584 303
4 3300046681 Ga0495647_0009441 Ga0495647_0009441_17_928 303
5 3300005544 Ga0070686_100013263 Ga0070686_1000132631 305
6 3300049589 Ga0501073_0228373 Ga0501073_0228373_25_966 307
7 3300049742 Ga0501080_0047925 Ga0501080_0047925_1413_2354 307
8 3300053139 Ga0500568_0023144 Ga0500568_0023144_25_960 307
9 3300053153 Ga0500616_0006412 Ga0500616_0006412_4773_5708 307
10 3300028800 Ga0265338_10001733 Ga0265338_1000173336 308
11 3300031251 Ga0265327_10001949 Ga0265327_1000194916 308
12 3300031344 Ga0265316_10007969 Ga0265316_100079699 308
13 3300049742 Ga0501080_0003167 Ga0501080_0003167_10508_11446 308
14 3300021384 Ga0213876_10001327 Ga0213876_100013276 311
15 3300039437 Ga0436365_0900697 Ga0436365_0900697_8555_9511 311
16 3300039437 Ga0436365_0972456 Ga0436365_0972456_1901_2857 311
17 3300053153 Ga0500616_0001063 Ga0500616_0001063_26876_27832 311
18 3300005434 Ga0070709_10020438 Ga0070709_100204382 312
19 3300005445 Ga0070708_100123434 Ga0070708_1001234341 312
20 3300005471 Ga0070698_100001630 Ga0070698_1000016305 312
21 3300005518 Ga0070699_100077414 Ga0070699_1000774143 312
22 3300005536 Ga0070697_100166381 Ga0070697_1001663812 312
23 3300005539 Ga0068853_100000007 Ga0068853_100000007214 312
24 3300006028 Ga0070717_10010887 Ga0070717_100108877 312
25 3300006028 Ga0070717_10024065 Ga0070717_100240656 312
26 3300006175 Ga0070712_100266314 Ga0070712_1002663142 312
27 3300021361 Ga0213872_10059047 Ga0213872_100590472 312
28 3300021384 Ga0213876_10001497 Ga0213876_100014978 312
29 3300025910 Ga0207684_10406231 Ga0207684_104062311 312
30 3300026041 Ga0207639_10000001 Ga0207639_1000000111 312
31 3300037853 Ga0436364_0501020 Ga0436364_0501020_305_1264 312
32 3300039437 Ga0436365_0189753 Ga0436365_0189753_9143_10102 312
33 3300039438 Ga0436360_0685729 Ga0436360_0685729_5783_6742 312
34 3300039438 Ga0436360_0737402 Ga0436360_0737402_2673_3632 312
35 3300039438 Ga0436360_0904662 Ga0436360_0904662_2146_3105 312
36 3300039447 Ga0436361_0350933 Ga0436361_0350933_773_1819 312
37 3300039447 Ga0436361_0547481 Ga0436361_0547481_125_1084 312
38 3300039447 Ga0436361_0738791 Ga0436361_0738791_699_1658 312
39 3300039447 Ga0436361_1220582 Ga0436361_1220582_1347_2306 312
40 3300039453 Ga0436362_0972731 Ga0436362_0972731_1786_2745 312
41 3300005467 Ga0070706_100083764 Ga0070706_1000837643 313
42 3300005468 Ga0070707_100130117 Ga0070707_1001301171 313
43 3300005471 Ga0070698_100015013 Ga0070698_1000150132 313
44 3300005518 Ga0070699_100008580 Ga0070699_1000085805 313
45 3300005536 Ga0070697_100018459 Ga0070697_1000184596 313
46 3300006195 Ga0075366_10003949 Ga0075366_100039492 313
47 3300021361 Ga0213872_10000719 Ga0213872_1000071912 313
48 3300021361 Ga0213872_10007148 Ga0213872_100071481 313
49 3300021377 Ga0213874_10013193 Ga0213874_100131933 313
50 3300025922 Ga0207646_10083149 Ga0207646_100831491 313
51 3300037418 Ga0395900_0003983 Ga0395900_0003983_6616_7578 313
52 3300037466 Ga0395898_0258847 Ga0395898_0258847_139_1101 313
53 3300038443 Ga0395901_0003735 Ga0395901_0003735_7790_8752 313
54 3300039438 Ga0436360_0850874 Ga0436360_0850874_962_1924 313
55 3300039447 Ga0436361_0151752 Ga0436361_0151752_88_1050 313
56 3300039447 Ga0436361_0414436 Ga0436361_0414436_273_1310 313
57 3300039447 Ga0436361_1157696 Ga0436361_1157696_4770_5732 313
58 3300039450 Ga0436363_1648880 Ga0436363_1648880_4032_4994 313
59 3300048912 Ga0496109_0338039 Ga0496109_0338039_102_1064 313
60 3300050490 nmdc:mga03n38_54370_c1 nmdc:mga03n38_54370_c1_230_1192 313
61 3300050493 nmdc:mga0k408_1746_c1 nmdc:mga0k408_1746_c1_858_1820 313
62 3300053103 Ga0500555_000615 Ga0500555_000615_8664_9626 313
63 3300053104 Ga0500556_0000457 Ga0500556_0000457_21874_22836 313
64 3300000545 CNXas_1001639 CNXas_10016391 314
65 3300003320 rootH2_10066373 rootH2_100663732 314
66 3300005330 Ga0070690_100006168 Ga0070690_1000061685 314
67 3300005330 Ga0070690_100120804 Ga0070690_1001208042 314
68 3300005339 Ga0070660_100168497 Ga0070660_1001684972 314
69 3300005341 Ga0070691_10058423 Ga0070691_100584232 314
70 3300005365 Ga0070688_100182913 Ga0070688_1001829131 314
71 3300005438 Ga0070701_10002361 Ga0070701_100023614 314
72 3300005439 Ga0070711_100006288 Ga0070711_1000062884 314
73 3300005440 Ga0070705_100015074 Ga0070705_1000150742 314
74 3300005458 Ga0070681_10026491 Ga0070681_100264916 314
75 3300005530 Ga0070679_100040024 Ga0070679_1000400245 314
76 3300005535 Ga0070684_100290224 Ga0070684_1002902242 314
77 3300005539 Ga0068853_100116746 Ga0068853_1001167462 314
78 3300005547 Ga0070693_100081808 Ga0070693_1000818081 314
79 3300005548 Ga0070665_100000027 Ga0070665_100000027237 314
80 3300005549 Ga0070704_100055595 Ga0070704_1000555952 314
81 3300005563 Ga0068855_100015729 Ga0068855_1000157296 314
82 3300005563 Ga0068855_100063676 Ga0068855_1000636764 314
83 3300005563 Ga0068855_100082910 Ga0068855_1000829105 314
84 3300005563 Ga0068855_100270410 Ga0068855_1002704103 314
85 3300005577 Ga0068857_100001576 Ga0068857_10000157619 314
86 3300005577 Ga0068857_100074410 Ga0068857_1000744102 314
87 3300005614 Ga0068856_100252931 Ga0068856_1002529312 314
88 3300005617 Ga0068859_100002866 Ga0068859_1000028662 314
89 3300005842 Ga0068858_100175139 Ga0068858_1001751392 314
90 3300006237 Ga0097621_100008410 Ga0097621_1000084103 314
91 3300006931 Ga0097620_100002866 Ga0097620_1000028662 314
92 3300006931 Ga0097620_100551346 Ga0097620_1005513462 314
93 3300009093 Ga0105240_10000018 Ga0105240_10000018340 314
94 3300009093 Ga0105240_10007108 Ga0105240_100071084 314
95 3300009093 Ga0105240_10177322 Ga0105240_101773222 314
96 3300009093 Ga0105240_10466150 Ga0105240_104661501 314
97 3300009094 Ga0111539_10180653 Ga0111539_101806532 314
98 3300009094 Ga0111539_10189932 Ga0111539_101899323 314
99 3300009094 Ga0111539_10362077 Ga0111539_103620772 314
100 3300009098 Ga0105245_10295474 Ga0105245_102954742 314
101 3300009174 Ga0105241_10077274 Ga0105241_100772742 314
102 3300009545 Ga0105237_10614828 Ga0105237_106148281 314
103 3300009551 Ga0105238_10096030 Ga0105238_100960301 314
104 3300010375 Ga0105239_10185287 Ga0105239_101852873 314
105 3300013296 Ga0157374_10566780 Ga0157374_105667801 314
106 3300013306 Ga0163162_10498768 Ga0163162_104987682 314
107 3300013307 Ga0157372_10370994 Ga0157372_103709942 314
108 3300013308 Ga0157375_10340093 Ga0157375_103400931 314
109 3300014325 Ga0163163_10000049 Ga0163163_1000004935 314
110 3300014325 Ga0163163_10361014 Ga0163163_103610142 314
111 3300025909 Ga0207705_10249469 Ga0207705_102494692 314
112 3300025913 Ga0207695_10000415 Ga0207695_1000041521 314
113 3300025913 Ga0207695_10084638 Ga0207695_100846382 314
114 3300025913 Ga0207695_10265500 Ga0207695_102655002 314
115 3300025913 Ga0207695_10349159 Ga0207695_103491591 314
116 3300025914 Ga0207671_10008726 Ga0207671_100087262 314
117 3300025914 Ga0207671_10333538 Ga0207671_103335382 314
118 3300025919 Ga0207657_10109130 Ga0207657_101091302 314
119 3300025919 Ga0207657_10271221 Ga0207657_102712211 314
120 3300025921 Ga0207652_10302260 Ga0207652_103022602 314
121 3300025924 Ga0207694_10068441 Ga0207694_100684413 314
122 3300025924 Ga0207694_10337983 Ga0207694_103379831 314
123 3300025928 Ga0207700_10071337 Ga0207700_100713373 314
124 3300025936 Ga0207670_10065620 Ga0207670_100656202 314
125 3300025936 Ga0207670_10254099 Ga0207670_102540991 314
126 3300025949 Ga0207667_10012899 Ga0207667_100128992 314
127 3300025949 Ga0207667_10075933 Ga0207667_100759334 314
128 3300025949 Ga0207667_10103832 Ga0207667_101038322 314
129 3300025961 Ga0207712_10087374 Ga0207712_100873742 314
130 3300026023 Ga0207677_10053733 Ga0207677_100537332 314
131 3300026035 Ga0207703_10159947 Ga0207703_101599472 314
132 3300026041 Ga0207639_10244790 Ga0207639_102447902 314
133 3300026078 Ga0207702_10002117 Ga0207702_100021178 314
134 3300026078 Ga0207702_10040485 Ga0207702_100404852 314
135 3300026088 Ga0207641_10122234 Ga0207641_101222342 314
136 3300026116 Ga0207674_10012192 Ga0207674_100121923 314
137 3300026116 Ga0207674_10080911 Ga0207674_100809113 314
138 3300028379 Ga0268266_10000050 Ga0268266_1000005048 314
139 3300028556 Ga0265337_1000409 Ga0265337_10004095 314
140 3300028556 Ga0265337_1000849 Ga0265337_10008497 314
141 3300028556 Ga0265337_1003671 Ga0265337_10036713 314
142 3300028556 Ga0265337_1006392 Ga0265337_10063924 314
143 3300028556 Ga0265337_1013104 Ga0265337_10131043 314
144 3300028558 Ga0265326_10009085 Ga0265326_100090852 314
145 3300028558 Ga0265326_10019033 Ga0265326_100190332 314
146 3300028563 Ga0265319_1000372 Ga0265319_100037211 314
147 3300028563 Ga0265319_1008240 Ga0265319_10082402 314
148 3300028573 Ga0265334_10007242 Ga0265334_100072427 314
149 3300028653 Ga0265323_10009766 Ga0265323_100097663 314
150 3300028666 Ga0265336_10000836 Ga0265336_100008362 314
151 3300028800 Ga0265338_10000041 Ga0265338_1000004138 314
152 3300028800 Ga0265338_10000452 Ga0265338_1000045216 314
153 3300028800 Ga0265338_10001224 Ga0265338_100012243 314
154 3300028800 Ga0265338_10002101 Ga0265338_100021013 314
155 3300028800 Ga0265338_10007264 Ga0265338_100072647 314
156 3300028800 Ga0265338_10011378 Ga0265338_100113786 314
157 3300028800 Ga0265338_10020032 Ga0265338_1002003211 314
158 3300028800 Ga0265338_10020565 Ga0265338_100205654 314
159 3300028800 Ga0265338_10022110 Ga0265338_100221106 314
160 3300028800 Ga0265338_10024830 Ga0265338_100248302 314
161 3300028800 Ga0265338_10068064 Ga0265338_100680643 314
162 3300028800 Ga0265338_10073082 Ga0265338_100730824 314
163 3300028800 Ga0265338_10087864 Ga0265338_100878642 314
164 3300028800 Ga0265338_10098904 Ga0265338_100989043 314
165 3300029957 Ga0265324_10009322 Ga0265324_100093224 314
166 3300030521 Ga0307511_10000223 Ga0307511_1000022316 314
167 3300031239 Ga0265328_10041198 Ga0265328_100411981 314
168 3300031240 Ga0265320_10000666 Ga0265320_1000066619 314
169 3300031240 Ga0265320_10002788 Ga0265320_100027887 314
170 3300031240 Ga0265320_10016284 Ga0265320_100162844 314
171 3300031240 Ga0265320_10027935 Ga0265320_100279353 314
172 3300031240 Ga0265320_10084200 Ga0265320_100842002 314
173 3300031241 Ga0265325_10044334 Ga0265325_100443342 314
174 3300031241 Ga0265325_10048771 Ga0265325_100487713 314
175 3300031247 Ga0265340_10014866 Ga0265340_100148664 314
176 3300031247 Ga0265340_10033649 Ga0265340_100336492 314
177 3300031247 Ga0265340_10065263 Ga0265340_100652632 314
178 3300031247 Ga0265340_10159388 Ga0265340_101593881 314
179 3300031249 Ga0265339_10020591 Ga0265339_100205914 314
180 3300031251 Ga0265327_10001858 Ga0265327_100018584 314
181 3300031251 Ga0265327_10011483 Ga0265327_100114832 314
182 3300031344 Ga0265316_10011373 Ga0265316_100113735 314
183 3300031595 Ga0265313_10003311 Ga0265313_100033118 314
184 3300031595 Ga0265313_10003545 Ga0265313_100035458 314
185 3300031711 Ga0265314_10011573 Ga0265314_100115735 314
186 3300031711 Ga0265314_10067523 Ga0265314_100675232 314
187 3300031711 Ga0265314_10074512 Ga0265314_100745122 314
188 3300031711 Ga0265314_10131573 Ga0265314_101315732 314
189 3300031712 Ga0265342_10006839 Ga0265342_100068393 314
190 3300031712 Ga0265342_10024370 Ga0265342_100243704 314
191 3300031852 Ga0307410_10187307 Ga0307410_101873071 314
192 3300031911 Ga0307412_10059151 Ga0307412_100591513 314
193 3300034816 Ga0373930_0000619 Ga0373930_0000619_75_1019 314
194 3300035084 Ga0373928_0002625 Ga0373928_0002625_458_1402 314
195 3300035085 Ga0373929_0002459 Ga0373929_0002459_432_1376 314
196 3300035088 Ga0373940_0041296 Ga0373940_0041296_21_965 314
197 3300035089 Ga0373944_0001683 Ga0373944_0001683_2011_2955 314
198 3300035090 Ga0373949_0001697 Ga0373949_0001697_2705_3649 314
199 3300035091 Ga0373951_0009290 Ga0373951_0009290_1191_2135 314
200 3300035112 Ga0373932_0000002 Ga0373932_0000002_66443_67387 314
201 3300035114 Ga0373939_0042272 Ga0373939_0042272_41_985 314
202 3300035117 Ga0373953_0010423 Ga0373953_0010423_1974_2918 314
203 3300035118 Ga0373954_0008400 Ga0373954_0008400_1684_2628 314
204 3300035171 Ga0373946_0022319 Ga0373946_0022319_1025_1969 314
205 3300035242 Ga0373962_0000426 Ga0373962_0000426_1063_2007 314
206 3300035691 Ga0373931_0000012 Ga0373931_0000012_66462_67406 314
207 3300035692 Ga0373935_0004069 Ga0373935_0004069_6384_7358 314
208 3300035692 Ga0373935_0140991 Ga0373935_0140991_152_1096 314
209 3300035695 Ga0373927_0013488 Ga0373927_0013488_3229_4173 314
210 3300035695 Ga0373927_0029709 Ga0373927_0029709_2446_3420 314
211 3300036401 Ga0373937_0060491 Ga0373937_0060491_2294_3238 314
212 3300037068 Ga0373925_0002892 Ga0373925_0002892_9153_10097 314
213 3300037068 Ga0373925_0039202 Ga0373925_0039202_195_1169 314
214 3300037418 Ga0395900_0031514 Ga0395900_0031514_2192_3136 314
215 3300037471 Ga0395905_0016655 Ga0395905_0016655_1299_2243 314
216 3300038443 Ga0395901_0356858 Ga0395901_0356858_513_1457 314
217 3300039447 Ga0436361_0207311 Ga0436361_0207311_1140_2123 314
218 3300042876 Ga0451577_0035196 Ga0451577_0035196_1381_2325 314
219 3300044712 Ga0453684_0002118 Ga0453684_0002118_13596_14540 314
220 3300044712 Ga0453684_0013422 Ga0453684_0013422_148_1092 314
221 3300044712 Ga0453684_0019330 Ga0453684_0019330_137_1081 314
222 3300044712 Ga0453684_0145038 Ga0453684_0145038_210_1154 314
223 3300045051 Ga0451576_0003334 Ga0451576_0003334_5984_6943 314
224 3300045051 Ga0451576_0057024 Ga0451576_0057024_1532_2476 314
225 3300045051 Ga0451576_0068858 Ga0451576_0068858_2656_3600 314
226 3300045051 Ga0451576_0157041 Ga0451576_0157041_806_1750 314
227 3300045051 Ga0451576_0493905 Ga0451576_0493905_246_1190 314
228 3300046454 Ga0495592_0043302 Ga0495592_0043302_411_1355 314
229 3300046459 Ga0495629_0058326 Ga0495629_0058326_1306_2250 314
230 3300046514 Ga0495618_0062418 Ga0495618_0062418_1044_1988 314
231 3300046516 Ga0495628_0090520 Ga0495628_0090520_1077_2021 314
232 3300046517 Ga0495630_0000210 Ga0495630_0000210_16403_17347 314
233 3300046517 Ga0495630_0042539 Ga0495630_0042539_1273_2217 314
234 3300046517 Ga0495630_0046256 Ga0495630_0046256_718_1662 314
235 3300046517 Ga0495630_0064678 Ga0495630_0064678_1081_2025 314
236 3300046526 Ga0495666_0022427 Ga0495666_0022427_224_1168 314
237 3300046535 Ga0495586_0000094 Ga0495586_0000094_16403_17347 314
238 3300046535 Ga0495586_0000920 Ga0495586_0000920_14518_15462 314
239 3300046535 Ga0495586_0006642 Ga0495586_0006642_4895_5839 314
240 3300046535 Ga0495586_0152452 Ga0495586_0152452_305_1249 314
241 3300046543 Ga0495645_0107518 Ga0495645_0107518_230_1174 314
242 3300046557 Ga0495622_0037216 Ga0495622_0037216_397_1341 314
243 3300046559 Ga0495667_0081767 Ga0495667_0081767_1034_1978 314
244 3300046642 Ga0495634_0023563 Ga0495634_0023563_993_1937 314
245 3300046678 Ga0495599_0097846 Ga0495599_0097846_256_1200 314
246 3300046683 Ga0495658_0006101 Ga0495658_0006101_464_1408 314
247 3300046683 Ga0495658_0025931 Ga0495658_0025931_1482_2426 314
248 3300046683 Ga0495658_0034969 Ga0495658_0034969_1381_2325 314
249 3300046684 Ga0495669_0048876 Ga0495669_0048876_572_1516 314
250 3300046689 Ga0495613_0040244 Ga0495613_0040244_1495_2439 314
251 3300046689 Ga0495613_0100994 Ga0495613_0100994_1121_2065 314
252 3300047319 Ga0495674_0002905 Ga0495674_0002905_256_1200 314
253 3300047321 Ga0495676_0057950 Ga0495676_0057950_880_1824 314
254 3300047322 Ga0495680_0026908 Ga0495680_0026908_2606_3550 314
255 3300047444 Ga0495675_0112245 Ga0495675_0112245_26_970 314
256 3300047471 Ga0495684_0079777 Ga0495684_0079777_279_1223 314
257 3300047471 Ga0495684_0080308 Ga0495684_0080308_1351_2295 314
258 3300048089 Ga0495614_0033841 Ga0495614_0033841_382_1326 314
259 3300049568 Ga0501031_0000012 Ga0501031_0000012_112095_113039 314
260 3300049570 Ga0501033_0001470 Ga0501033_0001470_18345_19289 314
261 3300049570 Ga0501033_0161512 Ga0501033_0161512_251_1195 314
262 3300049579 Ga0501043_0075066 Ga0501043_0075066_312_1385 314
263 3300049581 Ga0501047_0148895 Ga0501047_0148895_279_1352 314
264 3300049822 Ga0501035_0012569 Ga0501035_0012569_346_1290 314
265 3300049822 Ga0501035_0040354 Ga0501035_0040354_2349_3476 314
266 3300049823 Ga0501044_0000024 Ga0501044_0000024_108956_109900 314
267 3300049823 Ga0501044_0029522 Ga0501044_0029522_843_1916 314
268 3300050511 nmdc:mga08y16_241963_c1 nmdc:mga08y16_241963_c1_828_1772 314
269 3300050511 nmdc:mga08y16_434721_c1 nmdc:mga08y16_434721_c1_254_1198 314
270 iso_pu_bacteria 2786546517 2787436300 314

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13793

Pribosyltran_N

N-terminal domain of ribose phosphate pyrophosphokinase

62

178

0.99

PF14572

Pribosyl_synth

Phosphoribosyl synthetase-associated domain

252

368

0.96

PF00156

Pribosyltran

Phosphoribosyl transferase domain

203

332

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dkr-assembly1.cif.gz_B crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. 0.8648 2 305
1dku-assembly1.cif.gz_A crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. 0.861 2 305
1dkr-assembly1.cif.gz_A crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. 0.8605 2 307
1dkr-assembly1.cif.gz_A crystal structures of bacillus subtilis phosphoribosylpyrophosphate synthetase: molecular basis of allosteric inhibition and activation. 0.8525 2 307
3dah-assembly1.cif.gz_B 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from burkholderia pseudomallei 0.8501 2 305
ID Description Score Start End Superfamily
1dkuA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9573 145 283 3.40.50.2020
1dkuA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9429 145 283 3.40.50.2020
af_A4HTJ9_703_814_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9319 200 282 3.40.50.2020
af_Q75JN8_207_322_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9306 200 300 3.40.50.2020
3dahB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9239 144 283 3.40.50.2020
ID Description Score Start End GO Terms
AF-A0A7Z8G5V9-F1-model_v4 deleted 0.9438 203 307
AF-K2BZT4-F1-model_v4 Ribose-phosphate pyrophosphokinase N-terminal domain-containing protein 0.9425 2 88 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
AF-A0A520HHJ7-F1-model_v4 Phosphoribosylpyrophosphate synthetase 0.9417 1 87 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
AF-A0A1V6KDG8-F1-model_v4 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) 0.9416 200 307 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
GO:0016301
AF-A0A497JGM1-F1-model_v4 Ribose-phosphate pyrophosphokinase N-terminal domain-containing protein 0.9402 2 86 GO:0000287
GO:0002189
GO:0004749
GO:0005737
GO:0006015
GO:0006164
GO:0016301

Feature Viewer

pLDDT pTM Quality
84.98 0.85 High
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Predicted Structure (AlphaFold2)

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