F376874

General Info

Members Datasets Scaffolds Average Seq Length
270 192 540 129

Family's Representative Sequence

Representative Sequence 3300006914|Ga0075436_100054862|Ga0075436_1000548623
Length 156
Sequence MQLMPASLVPQSSNRITSTGGTTTTAMETKSIKLPGPNHPITIEPNPARVTVTVAGRVIADTRNALTLREAGYAAVQYIPQKDVDMTLLKRTDHHTYCPYKGDCAYYSIRLGGDRSVNAVWTYEVPYAAVAAIKDHVAFYPDRVDALEEQKDSKQA

Samples

Sample ID Description Type Environment
1 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
8 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
11 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
12 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
13 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
14 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
15 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
16 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
27 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
41 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
47 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
58 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
75 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
78 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
79 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
80 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
99 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
100 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
101 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
102 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
109 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
115 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
116 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
117 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
118 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
119 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
120 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
121 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
122 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
123 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
124 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
125 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
126 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
127 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
128 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
129 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
130 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
131 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
132 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
133 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
134 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
135 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
136 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
137 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
138 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
141 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
142 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
143 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
144 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
145 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
146 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
147 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
148 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
149 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
150 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
151 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
152 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
153 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
154 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
157 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
158 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
159 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
160 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
161 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
164 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
169 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
170 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
171 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
173 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
174 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
175 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
176 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
177 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
178 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
179 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
180 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
181 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
182 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
183 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
184 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
185 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
186 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
187 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
188 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
191 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0.74
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.15
Nodule 0
Rhizoplane 4.07
Rhizosphere 79.63
Stem 0
Stem Tuber 0
Unclassified 1.48

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075436_100054862 3300006914 Bacteria 2751
2 JGI24736J21556_1067451 3300001904 Bacteria 556
3 JGI24737J22298_10075469 3300001990 Bacteria 1005
4 JGI24735J21928_10000440 3300002067 Bacteria 14554
5 JGI25156J39149_1003721 3300002705 Bacteria 4883
6 JGI25154J39366_1002171 3300002738 Bacteria 5472
7 JGI25157J39369_1011290 3300002741 Bacteria 1158
8 JGI25153J46596_10049031 3300003215 Bacteria 1229
9 rootH1_10038808 3300003316 Bacteria 1271
10 rootH1_10067647 3300003323 Bacteria 4778
11 rootH1_10110091 3300003323 Bacteria 2728
12 Ga0055535_1000167 3300003761 Bacteria 71096
13 Ga0055535_1011211 3300003761 Bacteria 1428
14 Ga0055529_1000151 3300003763 Bacteria 98866
15 Ga0055529_1036494 3300003763 Bacteria 598
16 Ga0065704_10212643 3300005289 Bacteria 1093
17 Ga0065707_10379220 3300005295 Bacteria 879
18 Ga0070658_10139691 3300005327 Bacteria 2023
19 Ga0070682_100179387 3300005337 Bacteria 1478
20 Ga0070687_100569849 3300005343 Bacteria 773
21 Ga0070661_100970386 3300005344 Bacteria 704
22 Ga0070661_101890288 3300005344 Bacteria 507
23 Ga0070709_10607268 3300005434 Bacteria 843
24 Ga0070709_11233496 3300005434 Bacteria 602
25 Ga0070714_100412345 3300005435 Bacteria 1279
26 Ga0070714_101281999 3300005435 Bacteria 715
27 Ga0070713_101642752 3300005436 Bacteria 624
28 Ga0070711_100291971 3300005439 Bacteria 1293
29 Ga0070708_100673235 3300005445 Bacteria 974
30 Ga0070708_101414349 3300005445 Bacteria 649
31 Ga0070708_101857267 3300005445 Bacteria 559
32 Ga0070663_100153800 3300005455 Bacteria 1766
33 Ga0070678_100242019 3300005456 Bacteria 1509
34 Ga0070706_100147349 3300005467 Bacteria 2198
35 Ga0070706_100322053 3300005467 Bacteria 1442
36 Ga0070706_101260550 3300005467 Bacteria 678
37 Ga0070706_101557052 3300005467 Bacteria 603
38 Ga0070707_100054010 3300005468 Bacteria 3851
39 Ga0070707_100779763 3300005468 Bacteria 919
40 Ga0070707_101581270 3300005468 Bacteria 622
41 Ga0070707_101586159 3300005468 Bacteria 621
42 Ga0070698_100034296 3300005471 Bacteria 5255
43 Ga0070698_100177415 3300005471 Bacteria 2069
44 Ga0070699_100038630 3300005518 Bacteria 4133
45 Ga0070699_100098286 3300005518 Bacteria 2564
46 Ga0070679_100174054 3300005530 Bacteria 2125
47 Ga0070697_100181925 3300005536 Bacteria 1782
48 Ga0070697_100357930 3300005536 Bacteria 1261
49 Ga0070697_100647417 3300005536 Bacteria 930
50 Ga0070695_100127446 3300005545 Bacteria 1750
51 Ga0070696_100669829 3300005546 Bacteria 843
52 Ga0070665_102162727 3300005548 Bacteria 560
53 Ga0070704_100333154 3300005549 Bacteria 1275
54 Ga0068861_100412676 3300005719 Bacteria 1201
55 Ga0068860_100163984 3300005843 Bacteria 2144
56 Ga0068860_100428719 3300005843 Bacteria 1312
57 Ga0068862_100071048 3300005844 Bacteria 3006
58 Ga0081540_1010174 3300005983 Bacteria 6394
59 Ga0075432_10231136 3300006058 Bacteria 743
60 Ga0070715_10438250 3300006163 Bacteria 735
61 Ga0070716_100514556 3300006173 Bacteria 885
62 Ga0070712_100595783 3300006175 Bacteria 935
63 Ga0070712_100745808 3300006175 Bacteria 837
64 Ga0070712_101384337 3300006175 Bacteria 614
65 Ga0097621_100682913 3300006237 Bacteria 944
66 Ga0068871_102031372 3300006358 Bacteria 547
67 Ga0075428_102199486 3300006844 Bacteria 569
68 Ga0075431_101349146 3300006847 Bacteria 673
69 Ga0075434_100247161 3300006871 Bacteria 1803
70 Ga0075434_100315317 3300006871 Bacteria 1584
71 Ga0075429_100648020 3300006880 Bacteria 925
72 Ga0099795_10132385 3300007788 Bacteria 1007
73 Ga0111539_10728926 3300009094 Bacteria 1154
74 Ga0105245_13089001 3300009098 Bacteria 516
75 Ga0114129_10382461 3300009147 Bacteria 1858
76 Ga0114129_11731538 3300009147 Bacteria 762
77 Ga0105242_11296889 3300009176 Bacteria 752
78 Ga0105238_10192922 3300009551 Bacteria 2013
79 Ga0105249_11716856 3300009553 Bacteria 700
80 Ga0105029_106668 3300009984 Bacteria 827
81 Ga0099796_10069800 3300010159 Bacteria 1266
82 Ga0105239_10573227 3300010375 Bacteria 1286
83 Ga0105239_10640732 3300010375 Bacteria 1213
84 Ga0157373_10088893 3300013100 Bacteria 2176
85 Ga0157369_10271195 3300013105 Bacteria 1768
86 Ga0157374_12488587 3300013296 Unclassified 545
87 Ga0157378_10229901 3300013297 Bacteria 1767
88 Ga0163162_11481921 3300013306 Bacteria 773
89 Ga0163162_12865590 3300013306 Bacteria 555
90 Ga0157372_11940828 3300013307 Bacteria 677
91 Ga0163163_10424682 3300014325 Bacteria 1388
92 Ga0163163_10438245 3300014325 Bacteria 1366
93 Ga0157380_11366700 3300014326 Bacteria 758
94 Ga0157380_12818146 3300014326 Bacteria 553
95 Ga0157377_10604162 3300014745 Bacteria 783
96 Ga0157376_10871698 3300014969 Bacteria 917
97 Ga0154015_1279566 3300020610 Unclassified 1670
98 Ga0213872_10008515 3300021361 Bacteria 4961
99 Ga0213875_10071765 3300021388 Bacteria 1616
100 Ga0213875_10097203 3300021388 Bacteria 1373
101 Ga0224712_10479269 3300022467 Bacteria 600
102 Ga0209435_100237 3300025206 Bacteria 14856
103 Ga0209672_100941 3300025228 Bacteria 13025
104 Ga0209258_101000 3300025242 Bacteria 13019
105 Ga0209646_1000121 3300025246 Bacteria 144839
106 Ga0209646_1019152 3300025246 Bacteria 997
107 Ga0209026_1003245 3300025250 Bacteria 5469
108 Ga0209759_1000064 3300025256 Bacteria 193120
109 Ga0209455_1012782 3300025272 Bacteria 1987
110 Ga0209025_1000152 3300025294 Bacteria 171558
111 Ga0209025_1083099 3300025294 Bacteria 1078
112 Ga0209758_1003182 3300025297 Bacteria 15352
113 Ga0207692_10980924 3300025898 Bacteria 557
114 Ga0207647_10016544 3300025904 Bacteria 5031
115 Ga0207699_10200165 3300025906 Bacteria 1353
116 Ga0207699_10522083 3300025906 Bacteria 859
117 Ga0207699_10758440 3300025906 Bacteria 712
118 Ga0207705_10574409 3300025909 Bacteria 876
119 Ga0207684_10062143 3300025910 Bacteria 3171
120 Ga0207684_10149630 3300025910 Bacteria 2008
121 Ga0207684_10264192 3300025910 Bacteria 1485
122 Ga0207684_10301286 3300025910 Bacteria 1382
123 Ga0207684_11274269 3300025910 Bacteria 606
124 Ga0207693_10088830 3300025915 Bacteria 2422
125 Ga0207693_10810634 3300025915 Bacteria 721
126 Ga0207663_10646466 3300025916 Bacteria 834
127 Ga0207662_10400179 3300025918 Bacteria 931
128 Ga0207646_10010524 3300025922 Bacteria 9027
129 Ga0207646_10344036 3300025922 Bacteria 1347
130 Ga0207694_10037170 3300025924 Bacteria 3738
131 Ga0207665_10179563 3300025939 Bacteria 1532
132 Ga0207665_10335766 3300025939 Bacteria 1137
133 Ga0207651_11288364 3300025960 Bacteria 657
134 Ga0207668_10071172 3300025972 Bacteria 2483
135 Ga0207678_10265435 3300026067 Bacteria 1472
136 Ga0207678_10988625 3300026067 Bacteria 745
137 Ga0207683_10957707 3300026121 Bacteria 795
138 Ga0265319_1181365 3300028563 Bacteria 649
139 Ga0265330_10441645 3300031235 Bacteria 552
140 Ga0265328_10077273 3300031239 Bacteria 1226
141 Ga0265328_10221270 3300031239 Bacteria 721
142 Ga0265325_10390080 3300031241 Bacteria 611
143 Ga0265316_11197529 3300031344 Bacteria 525
144 Ga0265316_11285781 3300031344 Bacteria 505
145 Ga0265314_10360111 3300031711 Bacteria 798
146 Ga0265314_10374902 3300031711 Bacteria 776
147 Ga0307406_11420979 3300031901 Bacteria 609
148 Ga0307409_100042089 3300031995 Bacteria 3418
149 Ga0307416_100564876 3300032002 Unclassified 1213
150 Ga0307415_100082490 3300032126 Bacteria 2300
151 Ga0307507_10118699 3300033179 Bacteria 2125
152 Ga0373935_0319884 3300035692 Bacteria 1101
153 Ga0373927_0066237 3300035695 Bacteria 2336
154 Ga0373927_0120113 3300035695 Bacteria 1715
155 Ga0373937_0301595 3300036401 Bacteria 1514
156 Ga0436364_0636849 3300037853 Bacteria 2304
157 Ga0436360_1159735 3300039438 Bacteria 1631
158 Ga0436361_0054262 3300039447 Bacteria 16192
159 Ga0436361_0298896 3300039447 Bacteria 2964
160 Ga0436361_1051731 3300039447 Bacteria 2561
161 Ga0451789_0707057 3300041443 Bacteria 5679
162 Ga0451791_0015920 3300041451 Bacteria 3136
163 Ga0451793_0133787 3300041452 Bacteria 10643
164 Ga0451797_0142056 3300041453 Bacteria 2449
165 Ga0451795_0993016 3300041456 Bacteria 1840
166 Ga0451833_1025747 3300041491 Bacteria 1282
167 Ga0451841_0464508 3300041498 Bacteria 4785
168 Ga0451843_1392814 3300041509 Bacteria 682
169 Ga0451853_1948874 3300041512 Bacteria 3181
170 Ga0439431_0045972 3300041997 Bacteria 1122
171 Ga0466968_0022214 3300044735 Bacteria 2577
172 Ga0495617_002701 3300046452 Bacteria 6879
173 Ga0495617_014097 3300046452 Bacteria 2717
174 Ga0495617_018047 3300046452 Bacteria 2385
175 Ga0495638_0000435 3300046460 Bacteria 50498
176 Ga0495638_0006095 3300046460 Bacteria 8827
177 Ga0495580_0592770 3300046472 Unclassified 733
178 Ga0495605_0001865 3300046474 Bacteria 13480
179 Ga0495584_0000603 3300046491 Bacteria 24146
180 Ga0495584_0510493 3300046491 Bacteria 612
181 Ga0495585_0009586 3300046492 Bacteria 5797
182 Ga0495585_0010623 3300046492 Bacteria 5472
183 Ga0495585_0023566 3300046492 Bacteria 3532
184 Ga0495585_0043837 3300046492 Bacteria 2500
185 Ga0495607_0012514 3300046501 Bacteria 5597
186 Ga0495607_0014570 3300046501 Bacteria 5112
187 Ga0495607_0043769 3300046501 Bacteria 2645
188 Ga0495583_0011832 3300046506 Bacteria 4985
189 Ga0495583_0263736 3300046506 Bacteria 689
190 Ga0495606_0001012 3300046507 Bacteria 40883
191 Ga0495606_0004962 3300046507 Bacteria 12989
192 Ga0495610_0011060 3300046512 Bacteria 5546
193 Ga0495610_0140915 3300046512 Bacteria 1038
194 Ga0495610_0256564 3300046512 Bacteria 690
195 Ga0495616_0019637 3300046513 Bacteria 3686
196 Ga0495620_0000067 3300046515 Bacteria 87838
197 Ga0495620_0039612 3300046515 Bacteria 2081
198 Ga0495631_0000781 3300046518 Bacteria 20405
199 Ga0495632_0014284 3300046519 Bacteria 4497
200 Ga0495643_0139796 3300046522 Bacteria 1209
201 Ga0495648_0068044 3300046524 Bacteria 2080
202 Ga0495609_0056822 3300046538 Bacteria 1733
203 Ga0495633_0002026 3300046558 Bacteria 14629
204 Ga0495633_0004248 3300046558 Bacteria 9169
205 Ga0495656_0085381 3300046615 Bacteria 1433
206 Ga0495656_0100106 3300046615 Bacteria 1339
207 Ga0495656_0295882 3300046615 Bacteria 828
208 Ga0495668_0002956 3300046616 Bacteria 13359
209 Ga0495611_0012980 3300046648 Bacteria 3542
210 Ga0495611_0289682 3300046648 Bacteria 755
211 Ga0495625_0003160 3300046660 Bacteria 16783
212 Ga0495625_0008851 3300046660 Bacteria 8520
213 Ga0495625_0043350 3300046660 Bacteria 3263
214 Ga0495625_0070179 3300046660 Bacteria 2460
215 Ga0495625_0449182 3300046660 Bacteria 797
216 Ga0495659_0140813 3300046664 Bacteria 962
217 Ga0495661_0005153 3300046665 Bacteria 9312
218 Ga0495661_0030131 3300046665 Bacteria 3457
219 Ga0495658_0378930 3300046683 Bacteria 901
220 Ga0495670_0045457 3300046691 Bacteria 2192
221 Ga0495670_0189498 3300046691 Bacteria 1087
222 Ga0495671_0130349 3300046692 Bacteria 1226
223 Ga0495671_0289695 3300046692 Bacteria 788
224 Ga0495660_0104848 3300046810 Bacteria 1450
225 Ga0495636_0088285 3300047318 Bacteria 1343
226 Ga0495636_0139839 3300047318 Bacteria 1081
227 Ga0495674_0596116 3300047319 Bacteria 876
228 Ga0495672_0002274 3300047320 Bacteria 17851
229 Ga0495672_0004791 3300047320 Bacteria 10911
230 Ga0495672_0014047 3300047320 Bacteria 5499
231 Ga0495683_0002964 3300047323 Bacteria 10026
232 Ga0495677_0051704 3300047445 Bacteria 1513
233 Ga0495673_0008857 3300047469 Bacteria 5612
234 Ga0496104_0282460 3300048907 Bacteria 1573
235 Ga0496105_0132980 3300048908 Bacteria 2050
236 Ga0496108_0237983 3300048911 Bacteria 1584
237 Ga0496109_1077965 3300048912 Bacteria 740
238 Ga0496113_0002998 3300048916 Bacteria 9997
239 Ga0496115_0000693 3300048918 Bacteria 25019
240 Ga0496123_0287971 3300048926 Bacteria 790
241 Ga0496124_0465366 3300048927 Bacteria 858
242 Ga0496126_0043972 3300048929 Bacteria 4116
243 Ga0495678_046846 3300049459 Bacteria 1696
244 Ga0495682_0000480 3300049460 Bacteria 27579
245 Ga0495682_0084229 3300049460 Bacteria 1143
246 Ga0495682_0122406 3300049460 Bacteria 931
247 Ga0501034_0785063 3300049571 Bacteria 846
248 Ga0501067_0003330 3300049583 Bacteria 8837
249 Ga0501068_0049543 3300049584 Bacteria 2537
250 Ga0501069_0018357 3300049585 Bacteria 3775
251 Ga0501070_0974475 3300049586 Bacteria 659
252 nmdc:mga0n895_2658_c1 3300050512 Bacteria 14106
253 nmdc:mga0rr50_334686_c1 3300050513 Bacteria 1271
254 nmdc:mga08x19_9647_c1 3300050514 Bacteria 5781
255 nmdc:mga0a205_1172563_c1 3300050515 Bacteria 616
256 nmdc:mga0a205_4685_c1 3300050515 Bacteria 12273
257 nmdc:mga0sz30_175963_c1 3300050516 Bacteria 949
258 Ga0495595_0081255 3300053084 Bacteria 1544
259 Ga0495619_0337523 3300053085 Bacteria 1043
260 Ga0500557_015384 3300053105 Bacteria 2066
261 Ga0500562_016008 3300053108 Bacteria 1926
262 Ga0500569_193816 3300053109 Bacteria 690
263 Ga0500594_0000133 3300053118 Bacteria 20898
264 Ga0500568_0000509 3300053139 Bacteria 28652
265 Ga0500588_0000966 3300053146 Bacteria 5135
266 Ga0500588_0013099 3300053146 Bacteria 2074
267 Ga0500616_0003563 3300053153 Bacteria 11794
268 Ga0500627_0111512 3300053158 Bacteria 1231
269 Ga0500609_046744 3300053731 Bacteria 600
270 Ga0530510_0490133 3300061734 Bacteria 931
271 Ga0075436_100054862
272 JGI24736J21556_1067451
273 JGI24737J22298_10075469
274 JGI24735J21928_10000440
275 JGI25156J39149_1003721
276 JGI25154J39366_1002171
277 JGI25157J39369_1011290
278 JGI25153J46596_10049031
279 rootH1_10038808
280 rootH1_10067647
281 rootH1_10110091
282 Ga0055535_1000167
283 Ga0055535_1011211
284 Ga0055529_1000151
285 Ga0055529_1036494
286 Ga0065704_10212643
287 Ga0065707_10379220
288 Ga0070658_10139691
289 Ga0070682_100179387
290 Ga0070687_100569849
291 Ga0070661_100970386
292 Ga0070661_101890288
293 Ga0070709_10607268
294 Ga0070709_11233496
295 Ga0070714_100412345
296 Ga0070714_101281999
297 Ga0070713_101642752
298 Ga0070711_100291971
299 Ga0070708_100673235
300 Ga0070708_101414349
301 Ga0070708_101857267
302 Ga0070663_100153800
303 Ga0070678_100242019
304 Ga0070706_100147349
305 Ga0070706_100322053
306 Ga0070706_101260550
307 Ga0070706_101557052
308 Ga0070707_100054010
309 Ga0070707_100779763
310 Ga0070707_101581270
311 Ga0070707_101586159
312 Ga0070698_100034296
313 Ga0070698_100177415
314 Ga0070699_100038630
315 Ga0070699_100098286
316 Ga0070679_100174054
317 Ga0070697_100181925
318 Ga0070697_100357930
319 Ga0070697_100647417
320 Ga0070695_100127446
321 Ga0070696_100669829
322 Ga0070665_102162727
323 Ga0070704_100333154
324 Ga0068861_100412676
325 Ga0068860_100163984
326 Ga0068860_100428719
327 Ga0068862_100071048
328 Ga0081540_1010174
329 Ga0075432_10231136
330 Ga0070715_10438250
331 Ga0070716_100514556
332 Ga0070712_100595783
333 Ga0070712_100745808
334 Ga0070712_101384337
335 Ga0097621_100682913
336 Ga0068871_102031372
337 Ga0075428_102199486
338 Ga0075431_101349146
339 Ga0075434_100247161
340 Ga0075434_100315317
341 Ga0075429_100648020
342 Ga0099795_10132385
343 Ga0111539_10728926
344 Ga0105245_13089001
345 Ga0114129_10382461
346 Ga0114129_11731538
347 Ga0105242_11296889
348 Ga0105238_10192922
349 Ga0105249_11716856
350 Ga0105029_106668
351 Ga0099796_10069800
352 Ga0105239_10573227
353 Ga0105239_10640732
354 Ga0157373_10088893
355 Ga0157369_10271195
356 Ga0157374_12488587
357 Ga0157378_10229901
358 Ga0163162_11481921
359 Ga0163162_12865590
360 Ga0157372_11940828
361 Ga0163163_10424682
362 Ga0163163_10438245
363 Ga0157380_11366700
364 Ga0157380_12818146
365 Ga0157377_10604162
366 Ga0157376_10871698
367 Ga0154015_1279566
368 Ga0213872_10008515
369 Ga0213875_10071765
370 Ga0213875_10097203
371 Ga0224712_10479269
372 Ga0209435_100237
373 Ga0209672_100941
374 Ga0209258_101000
375 Ga0209646_1000121
376 Ga0209646_1019152
377 Ga0209026_1003245
378 Ga0209759_1000064
379 Ga0209455_1012782
380 Ga0209025_1000152
381 Ga0209025_1083099
382 Ga0209758_1003182
383 Ga0207692_10980924
384 Ga0207647_10016544
385 Ga0207699_10200165
386 Ga0207699_10522083
387 Ga0207699_10758440
388 Ga0207705_10574409
389 Ga0207684_10062143
390 Ga0207684_10149630
391 Ga0207684_10264192
392 Ga0207684_10301286
393 Ga0207684_11274269
394 Ga0207693_10088830
395 Ga0207693_10810634
396 Ga0207663_10646466
397 Ga0207662_10400179
398 Ga0207646_10010524
399 Ga0207646_10344036
400 Ga0207694_10037170
401 Ga0207665_10179563
402 Ga0207665_10335766
403 Ga0207651_11288364
404 Ga0207668_10071172
405 Ga0207678_10265435
406 Ga0207678_10988625
407 Ga0207683_10957707
408 Ga0265319_1181365
409 Ga0265330_10441645
410 Ga0265328_10077273
411 Ga0265328_10221270
412 Ga0265325_10390080
413 Ga0265316_11197529
414 Ga0265316_11285781
415 Ga0265314_10360111
416 Ga0265314_10374902
417 Ga0307406_11420979
418 Ga0307409_100042089
419 Ga0307416_100564876
420 Ga0307415_100082490
421 Ga0307507_10118699
422 Ga0373935_0319884
423 Ga0373927_0066237
424 Ga0373927_0120113
425 Ga0373937_0301595
426 Ga0436364_0636849
427 Ga0436360_1159735
428 Ga0436361_0054262
429 Ga0436361_0298896
430 Ga0436361_1051731
431 Ga0451789_0707057
432 Ga0451791_0015920
433 Ga0451793_0133787
434 Ga0451797_0142056
435 Ga0451795_0993016
436 Ga0451833_1025747
437 Ga0451841_0464508
438 Ga0451843_1392814
439 Ga0451853_1948874
440 Ga0439431_0045972
441 Ga0466968_0022214
442 Ga0495617_002701
443 Ga0495617_014097
444 Ga0495617_018047
445 Ga0495638_0000435
446 Ga0495638_0006095
447 Ga0495580_0592770
448 Ga0495605_0001865
449 Ga0495584_0000603
450 Ga0495584_0510493
451 Ga0495585_0009586
452 Ga0495585_0010623
453 Ga0495585_0023566
454 Ga0495585_0043837
455 Ga0495607_0012514
456 Ga0495607_0014570
457 Ga0495607_0043769
458 Ga0495583_0011832
459 Ga0495583_0263736
460 Ga0495606_0001012
461 Ga0495606_0004962
462 Ga0495610_0011060
463 Ga0495610_0140915
464 Ga0495610_0256564
465 Ga0495616_0019637
466 Ga0495620_0000067
467 Ga0495620_0039612
468 Ga0495631_0000781
469 Ga0495632_0014284
470 Ga0495643_0139796
471 Ga0495648_0068044
472 Ga0495609_0056822
473 Ga0495633_0002026
474 Ga0495633_0004248
475 Ga0495656_0085381
476 Ga0495656_0100106
477 Ga0495656_0295882
478 Ga0495668_0002956
479 Ga0495611_0012980
480 Ga0495611_0289682
481 Ga0495625_0003160
482 Ga0495625_0008851
483 Ga0495625_0043350
484 Ga0495625_0070179
485 Ga0495625_0449182
486 Ga0495659_0140813
487 Ga0495661_0005153
488 Ga0495661_0030131
489 Ga0495658_0378930
490 Ga0495670_0045457
491 Ga0495670_0189498
492 Ga0495671_0130349
493 Ga0495671_0289695
494 Ga0495660_0104848
495 Ga0495636_0088285
496 Ga0495636_0139839
497 Ga0495674_0596116
498 Ga0495672_0002274
499 Ga0495672_0004791
500 Ga0495672_0014047
501 Ga0495683_0002964
502 Ga0495677_0051704
503 Ga0495673_0008857
504 Ga0496104_0282460
505 Ga0496105_0132980
506 Ga0496108_0237983
507 Ga0496109_1077965
508 Ga0496113_0002998
509 Ga0496115_0000693
510 Ga0496123_0287971
511 Ga0496124_0465366
512 Ga0496126_0043972
513 Ga0495678_046846
514 Ga0495682_0000480
515 Ga0495682_0084229
516 Ga0495682_0122406
517 Ga0501034_0785063
518 Ga0501067_0003330
519 Ga0501068_0049543
520 Ga0501069_0018357
521 Ga0501070_0974475
522 nmdc:mga0n895_2658_c1
523 nmdc:mga0rr50_334686_c1
524 nmdc:mga08x19_9647_c1
525 nmdc:mga0a205_1172563_c1
526 nmdc:mga0a205_4685_c1
527 nmdc:mga0sz30_175963_c1
528 Ga0495595_0081255
529 Ga0495619_0337523
530 Ga0500557_015384
531 Ga0500562_016008
532 Ga0500569_193816
533 Ga0500594_0000133
534 Ga0500568_0000509
535 Ga0500588_0000966
536 Ga0500588_0013099
537 Ga0500616_0003563
538 Ga0500627_0111512
539 Ga0500609_046744
540 Ga0530510_0490133

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04248

NTP_transf_9

Domain of unknown function (DUF427)

50

142

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3djm-assembly5.cif.gz_E crystal structure of a protein of unknown function from duf427 family (rsph17029_0682) from rhodobacter sphaeroides 2.4.1 at 2.51 a resolution 0.8733 15 126
3djm-assembly5.cif.gz_E crystal structure of a protein of unknown function from duf427 family (rsph17029_0682) from rhodobacter sphaeroides 2.4.1 at 2.51 a resolution 0.8584 15 126
1jke-assembly1.cif.gz_A d-tyr trnatyr deacylase from escherichia coli 0.5446 15 40
1yb3-assembly1.cif.gz_A conserved hypothetical protein pfu-178653-001 from pyrococcus furiosus 0.4587 13 62
1ask-assembly1.cif.gz_B nuclear transport factor 2 (ntf2) h66a mutant 0.4381 10 83
ID Description Score Start End Superfamily
af_P96817_9_123_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9111 9 122 2.170.150.40
af_O53404_128_241_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.9019 10 123 2.170.150.40
af_P96817_9_123_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.8958 9 122 2.170.150.40
af_O53404_128_241_2.170.150.40 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.8945 10 123 2.170.150.40
3djmD00 Mainly Beta;Beta Complex;Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A;Domain of unknown function (DUF427) 0.8646 15 126 2.170.150.40
ID Description Score Start End GO Terms
AF-A0A7Z0ZND1-F1-model_v4 deleted 0.9934 1 126
AF-A0A653RX12-F1-model_v4 DUF427 domain-containing protein 0.9932 2 126
AF-A0A2Z5MI25-F1-model_v4 deleted 0.9926 1 126
AF-A0A402D4G5-F1-model_v4 Uncharacterized protein 0.9925 1 125
AF-A0A1H7TDY3-F1-model_v4 Uncharacterized conserved protein, DUF427 family 0.9916 1 126

Map