F376758

General Info

Members Datasets Scaffolds Average Seq Length
270 149 540 341

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100003837|Ga0070713_1000038374
Length 361
Sequence MFGRGGRVGDPDRLFMTPRWDSGPLLQPISEAQPCGESLEDTGLLASFDVYRLFGQSRPLDAPPDEQEKRIPKPPESQEWLEIRDKAIEALALSKDLRLLATLGIALLRTDGIPGFSETVKVASKWLETYWTQVYPAVDEDVILRRNALNCFADPMAAVDGVRRVPLIRSRQHGIFSLRDIDIATHQQPAPEGSAPIDENQVNAAFASTALPELTELHASVTTAIDALQKIDARMREAAGSEAAPGFDALTAQFKRMSQVLRAQLAAHPEGAAAGLDASGADDNAGVGPSIGGVVKSRQDAIRALDAVAEFFKRTEPSSPIPMFLARAKRLVSKDFLEVLADIAPEAVPSARAAGGLREDN

Samples

Sample ID Description Type Environment
1 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
4 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
24 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
36 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
37 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
68 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
69 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
71 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
72 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
73 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
84 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
118 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
119 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
124 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
125 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
128 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
129 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
130 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
131 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
134 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
139 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
140 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
141 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
142 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
143 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
144 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
145 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
146 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
147 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0.37
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.37
Rhizosphere 99.26
Stem 0
Stem Tuber 0
Unclassified 2.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070713_100003837 3300005436 Bacteria 9959
2 MBSR1b_contig_7641564 2162886012 Bacteria 3510
3 JGI24746J21847_1001929 3300001977 Bacteria 3304
4 Ga0058859_10042077 3300004798 Bacteria 2530
5 Ga0065715_10001432 3300005293 Bacteria 7417
6 Ga0065707_10120508 3300005295 Bacteria 2132
7 Ga0070676_10006667 3300005328 Bacteria 6183
8 Ga0070676_10047949 3300005328 Bacteria 2496
9 Ga0070683_100227429 3300005329 Bacteria 1773
10 Ga0070690_100008599 3300005330 Bacteria 5885
11 Ga0070670_100058317 3300005331 Bacteria 3315
12 Ga0070670_100240351 3300005331 Bacteria 1577
13 Ga0070670_100281432 3300005331 Bacteria 1452
14 Ga0070677_10001969 3300005333 Bacteria 6516
15 Ga0070677_10016256 3300005333 Bacteria 2647
16 Ga0070677_10090959 3300005333 Bacteria 1327
17 Ga0068869_100001262 3300005334 Bacteria 14954
18 Ga0070666_10005360 3300005335 Bacteria 7862
19 Ga0070680_100434658 3300005336 Bacteria 1120
20 Ga0068868_100033936 3300005338 Bacteria 3936
21 Ga0068868_100278861 3300005338 Bacteria 1414
22 Ga0070689_100045770 3300005340 Bacteria 3370
23 Ga0070692_10044026 3300005345 Bacteria 2298
24 Ga0070668_100013174 3300005347 Bacteria 6165
25 Ga0070669_100006423 3300005353 Bacteria 8460
26 Ga0070669_100087606 3300005353 Bacteria 2328
27 Ga0070669_100103501 3300005353 Bacteria 2151
28 Ga0070675_100033284 3300005354 Bacteria 4178
29 Ga0070675_100085852 3300005354 Bacteria 2630
30 Ga0070675_100115432 3300005354 Bacteria 2276
31 Ga0070675_100182210 3300005354 Bacteria 1816
32 Ga0070671_100024944 3300005355 Bacteria 4899
33 Ga0070674_100009232 3300005356 Bacteria 5901
34 Ga0070673_100130158 3300005364 Bacteria 2110
35 Ga0070688_100002131 3300005365 Bacteria 9972
36 Ga0070701_10003359 3300005438 Bacteria 6319
37 Ga0070701_10027722 3300005438 Bacteria 2778
38 Ga0070705_100035940 3300005440 Bacteria 2781
39 Ga0070700_100016207 3300005441 Bacteria 4243
40 Ga0070694_100314134 3300005444 Bacteria 1204
41 Ga0070708_100064292 3300005445 Bacteria 3287
42 Ga0070708_100335431 3300005445 Bacteria 1425
43 Ga0070663_100042916 3300005455 Bacteria 3180
44 Ga0070663_100158435 3300005455 Bacteria 1741
45 Ga0070678_100115856 3300005456 Bacteria 2105
46 Ga0070662_100030540 3300005457 Bacteria 3772
47 Ga0068867_100023341 3300005459 Bacteria 4428
48 Ga0068867_100039843 3300005459 Bacteria 3427
49 Ga0070685_10011104 3300005466 Bacteria 4705
50 Ga0070707_100281815 3300005468 Bacteria 1615
51 Ga0070698_100000427 3300005471 Bacteria 44952
52 Ga0070698_100132895 3300005471 Bacteria 2443
53 Ga0070699_100013907 3300005518 Bacteria 6922
54 Ga0070697_100067361 3300005536 Bacteria 2929
55 Ga0070697_100230172 3300005536 Bacteria 1581
56 Ga0070672_100187552 3300005543 Bacteria 1725
57 Ga0070686_100005318 3300005544 Bacteria 7121
58 Ga0070695_100019296 3300005545 Bacteria 4150
59 Ga0070696_100041940 3300005546 Bacteria 3164
60 Ga0070665_100022374 3300005548 Bacteria 6362
61 Ga0070664_100005556 3300005564 Bacteria 10127
62 Ga0068857_100074236 3300005577 Bacteria 3031
63 Ga0068859_100057599 3300005617 Bacteria 3914
64 Ga0068859_100181926 3300005617 Bacteria 2185
65 Ga0068864_100012239 3300005618 Bacteria 7090
66 Ga0068864_100093731 3300005618 Bacteria 2653
67 Ga0068861_100008201 3300005719 Bacteria 7185
68 Ga0068861_100098782 3300005719 Bacteria 2318
69 Ga0068870_10002228 3300005840 Bacteria 8046
70 Ga0068863_100007057 3300005841 Bacteria 11007
71 Ga0068863_100212917 3300005841 Bacteria 1861
72 Ga0068863_100256726 3300005841 Bacteria 1689
73 Ga0068858_100016103 3300005842 Bacteria 7023
74 Ga0068858_100278323 3300005842 Bacteria 1593
75 Ga0068860_100018227 3300005843 Bacteria 6832
76 Ga0068860_100073344 3300005843 Bacteria 3254
77 Ga0068862_100029902 3300005844 Bacteria 4590
78 Ga0068862_100157427 3300005844 Bacteria 2026
79 Ga0097621_100144209 3300006237 Bacteria 2037
80 Ga0097621_100169518 3300006237 Bacteria 1881
81 Ga0097621_100241011 3300006237 Bacteria 1581
82 Ga0068871_100006007 3300006358 Bacteria 8549
83 Ga0068871_100221974 3300006358 Bacteria 1638
84 Ga0068871_100366983 3300006358 Bacteria 1276
85 Ga0075428_100002818 3300006844 Bacteria 18927
86 Ga0075428_100009989 3300006844 Bacteria 10545
87 Ga0075428_100015731 3300006844 Bacteria 8384
88 Ga0075428_100067544 3300006844 Bacteria 3912
89 Ga0075430_100004027 3300006846 Bacteria 12394
90 Ga0075430_100054608 3300006846 Bacteria 3361
91 Ga0075430_100154310 3300006846 Bacteria 1912
92 Ga0075430_100238523 3300006846 Unclassified 1507
93 Ga0075431_100001080 3300006847 Bacteria 24384
94 Ga0075431_100047060 3300006847 Bacteria 4447
95 Ga0075431_100109517 3300006847 Bacteria 2851
96 Ga0075431_100128643 3300006847 Bacteria 2613
97 Ga0075433_10002870 3300006852 Bacteria 13209
98 Ga0075433_10003757 3300006852 Bacteria 11750
99 Ga0075433_10157548 3300006852 Bacteria 2020
100 Ga0075433_10167274 3300006852 Unclassified 1957
101 Ga0075434_100125679 3300006871 Bacteria 2582
102 Ga0075434_100125975 3300006871 Bacteria 2578
103 Ga0075434_100274494 3300006871 Bacteria 1705
104 Ga0075429_100035201 3300006880 Bacteria 4354
105 Ga0075429_100123941 3300006880 Bacteria 2259
106 Ga0075429_100180315 3300006880 Bacteria 1851
107 Ga0075429_100278375 3300006880 Bacteria 1465
108 Ga0068865_100025702 3300006881 Bacteria 3876
109 Ga0068865_100031716 3300006881 Bacteria 3525
110 Ga0075436_100000215 3300006914 Bacteria 35586
111 Ga0097620_100057601 3300006931 Bacteria 3914
112 Ga0097620_100181915 3300006931 Bacteria 2185
113 Ga0075435_100016568 3300007076 Bacteria 5558
114 Ga0111539_10000065 3300009094 Bacteria 106698
115 Ga0111539_10001963 3300009094 Bacteria 27455
116 Ga0111539_10002074 3300009094 Bacteria 26775
117 Ga0111539_10018976 3300009094 Bacteria 8502
118 Ga0111539_10137597 3300009094 Bacteria 2860
119 Ga0111539_10145034 3300009094 Bacteria 2780
120 Ga0105245_10057786 3300009098 Bacteria 3490
121 Ga0105245_10252297 3300009098 Bacteria 1714
122 Ga0105247_10041509 3300009101 Bacteria 2816
123 Ga0114129_10000768 3300009147 Bacteria 40982
124 Ga0114129_10001675 3300009147 Bacteria 30186
125 Ga0114129_10003230 3300009147 Bacteria 22875
126 Ga0114129_10033390 3300009147 Bacteria 7272
127 Ga0114129_10082248 3300009147 Bacteria 4475
128 Ga0114129_10201706 3300009147 Bacteria 2693
129 Ga0105243_10040989 3300009148 Bacteria 3620
130 Ga0105248_10012122 3300009177 Bacteria 9512
131 Ga0105248_10157996 3300009177 Bacteria 2558
132 Ga0105248_10164351 3300009177 Bacteria 2502
133 Ga0105248_10224186 3300009177 Bacteria 2116
134 Ga0105248_10309111 3300009177 Bacteria 1780
135 Ga0105248_10383935 3300009177 Bacteria 1581
136 Ga0105249_10006579 3300009553 Bacteria 10112
137 Ga0105249_10064266 3300009553 Bacteria 3374
138 Ga0105249_10122551 3300009553 Bacteria 2473
139 Ga0105246_10015278 3300011119 Bacteria 4845
140 Ga0157374_10035554 3300013296 Bacteria 4558
141 Ga0157374_10133935 3300013296 Bacteria 2400
142 Ga0157374_10353445 3300013296 Bacteria 1460
143 Ga0157378_10443717 3300013297 Bacteria 1287
144 Ga0163162_10004356 3300013306 Bacteria 13624
145 Ga0157375_10183582 3300013308 Bacteria 2244
146 Ga0157375_10219429 3300013308 Bacteria 2060
147 Ga0163163_10053837 3300014325 Bacteria 3974
148 Ga0163163_10128602 3300014325 Bacteria 2572
149 Ga0163163_10216105 3300014325 Bacteria 1966
150 Ga0157380_10008631 3300014326 Bacteria 7283
151 Ga0157380_10017807 3300014326 Bacteria 5263
152 Ga0157377_10000814 3300014745 Bacteria 12911
153 Ga0157379_10048210 3300014968 Bacteria 3802
154 Ga0157379_10154773 3300014968 Bacteria 2068
155 Ga0157376_10015680 3300014969 Bacteria 5732
156 Ga0163161_10011022 3300017792 Bacteria 6261
157 Ga0163161_10121237 3300017792 Bacteria 1965
158 Ga0207697_10003240 3300025315 Bacteria 8093
159 Ga0207682_10000541 3300025893 Bacteria 17404
160 Ga0207682_10013442 3300025893 Bacteria 3189
161 Ga0207688_10001706 3300025901 Bacteria 11644
162 Ga0207645_10000521 3300025907 Bacteria 31943
163 Ga0207645_10056829 3300025907 Bacteria 2498
164 Ga0207643_10036550 3300025908 Bacteria 2755
165 Ga0207660_10245144 3300025917 Bacteria 1413
166 Ga0207662_10001988 3300025918 Bacteria 10091
167 Ga0207646_10431123 3300025922 Bacteria 1190
168 Ga0207681_10005130 3300025923 Bacteria 8044
169 Ga0207681_10082091 3300025923 Bacteria 2277
170 Ga0207650_10042846 3300025925 Bacteria 3321
171 Ga0207659_10161685 3300025926 Unclassified 1759
172 Ga0207659_10190941 3300025926 Bacteria 1630
173 Ga0207687_10044763 3300025927 Bacteria 3056
174 Ga0207700_10022022 3300025928 Bacteria 4365
175 Ga0207644_10049232 3300025931 Bacteria 3016
176 Ga0207644_10059682 3300025931 Bacteria 2759
177 Ga0207706_10002593 3300025933 Bacteria 17603
178 Ga0207704_10238704 3300025938 Bacteria 1356
179 Ga0207691_10003673 3300025940 Bacteria 14890
180 Ga0207691_10070110 3300025940 Bacteria 3166
181 Ga0207711_10021013 3300025941 Bacteria 5451
182 Ga0207711_10068406 3300025941 Bacteria 3076
183 Ga0207711_10323091 3300025941 Bacteria 1426
184 Ga0207689_10007578 3300025942 Bacteria 9512
185 Ga0207651_10004643 3300025960 Bacteria 6961
186 Ga0207712_10011321 3300025961 Bacteria 5681
187 Ga0207677_10005457 3300026023 Bacteria 6904
188 Ga0207677_10248989 3300026023 Bacteria 1442
189 Ga0207677_10365050 3300026023 Bacteria 1214
190 Ga0207703_10017415 3300026035 Bacteria 5608
191 Ga0207703_10112763 3300026035 Bacteria 2323
192 Ga0207678_10073873 3300026067 Bacteria 2922
193 Ga0207678_10187548 3300026067 Bacteria 1767
194 Ga0207708_10004438 3300026075 Bacteria 10342
195 Ga0207708_10056317 3300026075 Bacteria 2999
196 Ga0207641_10006419 3300026088 Bacteria 9910
197 Ga0207641_10214618 3300026088 Bacteria 1781
198 Ga0207648_10051074 3300026089 Bacteria 3614
199 Ga0207648_10095561 3300026089 Bacteria 2600
200 Ga0207676_10081907 3300026095 Bacteria 2623
201 Ga0207674_10075198 3300026116 Bacteria 3388
202 Ga0207675_100001414 3300026118 Bacteria 24026
203 Ga0207675_100001963 3300026118 Bacteria 20502
204 Ga0207675_100024559 3300026118 Bacteria 5603
205 Ga0207683_10001148 3300026121 Bacteria 24094
206 Ga0207683_10001966 3300026121 Bacteria 18186
207 Ga0207683_10427997 3300026121 Unclassified 1219
208 Ga0207428_10000457 3300027907 Bacteria 49397
209 Ga0207428_10000504 3300027907 Bacteria 46674
210 Ga0207428_10003186 3300027907 Bacteria 16064
211 Ga0207428_10056560 3300027907 Bacteria 3117
212 Ga0268265_10029382 3300028380 Bacteria 3944
213 Ga0268265_10105561 3300028380 Unclassified 2286
214 Ga0307408_100001384 3300031548 Bacteria 18041
215 Ga0307410_10004849 3300031852 Bacteria 7031
216 Ga0307407_10013556 3300031903 Bacteria 3962
217 Ga0307412_10227565 3300031911 Bacteria 1434
218 Ga0307409_100018688 3300031995 Bacteria 4669
219 Ga0307409_100494419 3300031995 Unclassified 1190
220 Ga0307414_10047590 3300032004 Bacteria 2953
221 Ga0373951_0018462 3300035091 Bacteria 1585
222 Ga0373960_0032474 3300035121 Bacteria 1466
223 Ga0373933_0046465 3300035724 Bacteria 2579
224 Ga0373937_0500699 3300036401 Bacteria 1154
225 Ga0439445_0012614 3300042004 Bacteria 2034
226 Ga0439434_0017276 3300042435 Bacteria 2159
227 Ga0439435_0005918 3300042436 Bacteria 2720
228 Ga0439460_0041890 3300042461 Bacteria 1347
229 Ga0450916_003312 3300042530 Bacteria 1764
230 Ga0451576_0022344 3300045051 Bacteria 6861
231 Ga0451576_0074689 3300045051 Bacteria 3527
232 Ga0451576_0409732 3300045051 Bacteria 1422
233 Ga0495643_0009398 3300046522 Bacteria 6078
234 Ga0495634_0047122 3300046642 Bacteria 2906
235 Ga0495674_0189099 3300047319 Bacteria 1712
236 Ga0496112_0182920 3300048915 Bacteria 2060
237 Ga0501075_0054087 3300049591 Bacteria 3019
238 nmdc:mga05p37_10252_c1 3300050507 Bacteria 11128
239 nmdc:mga05p37_172253_c1 3300050507 Bacteria 2639
240 nmdc:mga05p37_30096_c1 3300050507 Bacteria 6625
241 nmdc:mga05p37_433343_c1 3300050507 Unclassified 1527
242 nmdc:mga05p37_69600_c1 3300050507 Bacteria 4329
243 nmdc:mga09592_14801_c1 3300050508 Bacteria 6367
244 nmdc:mga09592_3840_c1 3300050508 Bacteria 12099
245 nmdc:mga09592_43252_c1 3300050508 Bacteria 3791
246 nmdc:mga09592_468054_c1 3300050508 Bacteria 1087
247 nmdc:mga0qj67_17935_c1 3300050509 Bacteria 5389
248 nmdc:mga0qj67_44942_c1 3300050509 Bacteria 3484
249 nmdc:mga06r32_148452_c1 3300050510 Bacteria 2322
250 nmdc:mga06r32_21094_c1 3300050510 Bacteria 6010
251 nmdc:mga06r32_36754_c1 3300050510 Bacteria 4631
252 nmdc:mga06r32_39022_c1 3300050510 Bacteria 4504
253 nmdc:mga06r32_5511_c1 3300050510 Bacteria 11401
254 nmdc:mga08y16_143633_c1 3300050511 Bacteria 2481
255 nmdc:mga08y16_149_c1 3300050511 Bacteria 60942
256 nmdc:mga08y16_169_c1 3300050511 Bacteria 57254
257 nmdc:mga08y16_2267_c1 3300050511 Bacteria 19723
258 nmdc:mga08y16_971_c1 3300050511 Bacteria 27901
259 nmdc:mga0n895_131198_c1 3300050512 Bacteria 2531
260 nmdc:mga0rr50_11930_c1 3300050513 Bacteria 5589
261 nmdc:mga0rr50_42324_c1 3300050513 Bacteria 3326
262 nmdc:mga08x19_26223_c1 3300050514 Bacteria 3635
263 nmdc:mga08x19_32808_c1 3300050514 Bacteria 3275
264 nmdc:mga0a205_11720_c1 3300050515 Bacteria 8088
265 nmdc:mga0a205_16837_c1 3300050515 Bacteria 6845
266 nmdc:mga0a205_175228_c1 3300050515 Bacteria 2040
267 nmdc:mga0a205_5074_c1 3300050515 Bacteria 11837
268 Ga0495601_0009126 3300053077 Bacteria 5857
269 Ga0501084_0176200 3300054114 Bacteria 1805
270 Ga0501082_0204756 3300060353 Bacteria 1717
271 Ga0070713_100003837
272 MBSR1b_contig_7641564
273 JGI24746J21847_1001929
274 Ga0058859_10042077
275 Ga0065715_10001432
276 Ga0065707_10120508
277 Ga0070676_10006667
278 Ga0070676_10047949
279 Ga0070683_100227429
280 Ga0070690_100008599
281 Ga0070670_100058317
282 Ga0070670_100240351
283 Ga0070670_100281432
284 Ga0070677_10001969
285 Ga0070677_10016256
286 Ga0070677_10090959
287 Ga0068869_100001262
288 Ga0070666_10005360
289 Ga0070680_100434658
290 Ga0068868_100033936
291 Ga0068868_100278861
292 Ga0070689_100045770
293 Ga0070692_10044026
294 Ga0070668_100013174
295 Ga0070669_100006423
296 Ga0070669_100087606
297 Ga0070669_100103501
298 Ga0070675_100033284
299 Ga0070675_100085852
300 Ga0070675_100115432
301 Ga0070675_100182210
302 Ga0070671_100024944
303 Ga0070674_100009232
304 Ga0070673_100130158
305 Ga0070688_100002131
306 Ga0070701_10003359
307 Ga0070701_10027722
308 Ga0070705_100035940
309 Ga0070700_100016207
310 Ga0070694_100314134
311 Ga0070708_100064292
312 Ga0070708_100335431
313 Ga0070663_100042916
314 Ga0070663_100158435
315 Ga0070678_100115856
316 Ga0070662_100030540
317 Ga0068867_100023341
318 Ga0068867_100039843
319 Ga0070685_10011104
320 Ga0070707_100281815
321 Ga0070698_100000427
322 Ga0070698_100132895
323 Ga0070699_100013907
324 Ga0070697_100067361
325 Ga0070697_100230172
326 Ga0070672_100187552
327 Ga0070686_100005318
328 Ga0070695_100019296
329 Ga0070696_100041940
330 Ga0070665_100022374
331 Ga0070664_100005556
332 Ga0068857_100074236
333 Ga0068859_100057599
334 Ga0068859_100181926
335 Ga0068864_100012239
336 Ga0068864_100093731
337 Ga0068861_100008201
338 Ga0068861_100098782
339 Ga0068870_10002228
340 Ga0068863_100007057
341 Ga0068863_100212917
342 Ga0068863_100256726
343 Ga0068858_100016103
344 Ga0068858_100278323
345 Ga0068860_100018227
346 Ga0068860_100073344
347 Ga0068862_100029902
348 Ga0068862_100157427
349 Ga0097621_100144209
350 Ga0097621_100169518
351 Ga0097621_100241011
352 Ga0068871_100006007
353 Ga0068871_100221974
354 Ga0068871_100366983
355 Ga0075428_100002818
356 Ga0075428_100009989
357 Ga0075428_100015731
358 Ga0075428_100067544
359 Ga0075430_100004027
360 Ga0075430_100054608
361 Ga0075430_100154310
362 Ga0075430_100238523
363 Ga0075431_100001080
364 Ga0075431_100047060
365 Ga0075431_100109517
366 Ga0075431_100128643
367 Ga0075433_10002870
368 Ga0075433_10003757
369 Ga0075433_10157548
370 Ga0075433_10167274
371 Ga0075434_100125679
372 Ga0075434_100125975
373 Ga0075434_100274494
374 Ga0075429_100035201
375 Ga0075429_100123941
376 Ga0075429_100180315
377 Ga0075429_100278375
378 Ga0068865_100025702
379 Ga0068865_100031716
380 Ga0075436_100000215
381 Ga0097620_100057601
382 Ga0097620_100181915
383 Ga0075435_100016568
384 Ga0111539_10000065
385 Ga0111539_10001963
386 Ga0111539_10002074
387 Ga0111539_10018976
388 Ga0111539_10137597
389 Ga0111539_10145034
390 Ga0105245_10057786
391 Ga0105245_10252297
392 Ga0105247_10041509
393 Ga0114129_10000768
394 Ga0114129_10001675
395 Ga0114129_10003230
396 Ga0114129_10033390
397 Ga0114129_10082248
398 Ga0114129_10201706
399 Ga0105243_10040989
400 Ga0105248_10012122
401 Ga0105248_10157996
402 Ga0105248_10164351
403 Ga0105248_10224186
404 Ga0105248_10309111
405 Ga0105248_10383935
406 Ga0105249_10006579
407 Ga0105249_10064266
408 Ga0105249_10122551
409 Ga0105246_10015278
410 Ga0157374_10035554
411 Ga0157374_10133935
412 Ga0157374_10353445
413 Ga0157378_10443717
414 Ga0163162_10004356
415 Ga0157375_10183582
416 Ga0157375_10219429
417 Ga0163163_10053837
418 Ga0163163_10128602
419 Ga0163163_10216105
420 Ga0157380_10008631
421 Ga0157380_10017807
422 Ga0157377_10000814
423 Ga0157379_10048210
424 Ga0157379_10154773
425 Ga0157376_10015680
426 Ga0163161_10011022
427 Ga0163161_10121237
428 Ga0207697_10003240
429 Ga0207682_10000541
430 Ga0207682_10013442
431 Ga0207688_10001706
432 Ga0207645_10000521
433 Ga0207645_10056829
434 Ga0207643_10036550
435 Ga0207660_10245144
436 Ga0207662_10001988
437 Ga0207646_10431123
438 Ga0207681_10005130
439 Ga0207681_10082091
440 Ga0207650_10042846
441 Ga0207659_10161685
442 Ga0207659_10190941
443 Ga0207687_10044763
444 Ga0207700_10022022
445 Ga0207644_10049232
446 Ga0207644_10059682
447 Ga0207706_10002593
448 Ga0207704_10238704
449 Ga0207691_10003673
450 Ga0207691_10070110
451 Ga0207711_10021013
452 Ga0207711_10068406
453 Ga0207711_10323091
454 Ga0207689_10007578
455 Ga0207651_10004643
456 Ga0207712_10011321
457 Ga0207677_10005457
458 Ga0207677_10248989
459 Ga0207677_10365050
460 Ga0207703_10017415
461 Ga0207703_10112763
462 Ga0207678_10073873
463 Ga0207678_10187548
464 Ga0207708_10004438
465 Ga0207708_10056317
466 Ga0207641_10006419
467 Ga0207641_10214618
468 Ga0207648_10051074
469 Ga0207648_10095561
470 Ga0207676_10081907
471 Ga0207674_10075198
472 Ga0207675_100001414
473 Ga0207675_100001963
474 Ga0207675_100024559
475 Ga0207683_10001148
476 Ga0207683_10001966
477 Ga0207683_10427997
478 Ga0207428_10000457
479 Ga0207428_10000504
480 Ga0207428_10003186
481 Ga0207428_10056560
482 Ga0268265_10029382
483 Ga0268265_10105561
484 Ga0307408_100001384
485 Ga0307410_10004849
486 Ga0307407_10013556
487 Ga0307412_10227565
488 Ga0307409_100018688
489 Ga0307409_100494419
490 Ga0307414_10047590
491 Ga0373951_0018462
492 Ga0373960_0032474
493 Ga0373933_0046465
494 Ga0373937_0500699
495 Ga0439445_0012614
496 Ga0439434_0017276
497 Ga0439435_0005918
498 Ga0439460_0041890
499 Ga0450916_003312
500 Ga0451576_0022344
501 Ga0451576_0074689
502 Ga0451576_0409732
503 Ga0495643_0009398
504 Ga0495634_0047122
505 Ga0495674_0189099
506 Ga0496112_0182920
507 Ga0501075_0054087
508 nmdc:mga05p37_10252_c1
509 nmdc:mga05p37_172253_c1
510 nmdc:mga05p37_30096_c1
511 nmdc:mga05p37_433343_c1
512 nmdc:mga05p37_69600_c1
513 nmdc:mga09592_14801_c1
514 nmdc:mga09592_3840_c1
515 nmdc:mga09592_43252_c1
516 nmdc:mga09592_468054_c1
517 nmdc:mga0qj67_17935_c1
518 nmdc:mga0qj67_44942_c1
519 nmdc:mga06r32_148452_c1
520 nmdc:mga06r32_21094_c1
521 nmdc:mga06r32_36754_c1
522 nmdc:mga06r32_39022_c1
523 nmdc:mga06r32_5511_c1
524 nmdc:mga08y16_143633_c1
525 nmdc:mga08y16_149_c1
526 nmdc:mga08y16_169_c1
527 nmdc:mga08y16_2267_c1
528 nmdc:mga08y16_971_c1
529 nmdc:mga0n895_131198_c1
530 nmdc:mga0rr50_11930_c1
531 nmdc:mga0rr50_42324_c1
532 nmdc:mga08x19_26223_c1
533 nmdc:mga08x19_32808_c1
534 nmdc:mga0a205_11720_c1
535 nmdc:mga0a205_16837_c1
536 nmdc:mga0a205_175228_c1
537 nmdc:mga0a205_5074_c1
538 Ga0495601_0009126
539 Ga0501084_0176200
540 Ga0501082_0204756

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06812

ImpA_N

ImpA, N-terminal, type VI secretion system

26

154

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6h8f-assembly1.cif.gz_A fragment of the c-terminal domain of the tssa component of the type vi secretion system from burkholderia cenocepacia 0.7647 284 322
6h8e-assembly1.cif.gz_B truncated derivative of the c-terminal domain of the tssa component of the type vi secretion system from burkholderia cenocepacia 0.7631 284 335
6hs5-assembly1.cif.gz_A n-terminal domain including the conserved impa_n region of the tssa component of the type vi secretion system from burkholderia cenocepacia 0.7594 10 252
6h8f-assembly1.cif.gz_B fragment of the c-terminal domain of the tssa component of the type vi secretion system from burkholderia cenocepacia 0.7453 284 325
6h8e-assembly1.cif.gz_B truncated derivative of the c-terminal domain of the tssa component of the type vi secretion system from burkholderia cenocepacia 0.7417 284 335
ID Description Score Start End Superfamily
af_Q9WVM3_439_518_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.7087 66 116 1.25.40.10
af_D3ZIT4_439_518_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.7085 66 116 1.25.40.10
af_I1MAX6_166_347_1.20.58.340 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;Magnesium transport protein CorA, transmembrane region 0.6411 186 260 1.20.58.340
af_Q9UJX3_473_552_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.6314 66 138 1.25.40.10
af_B0V1J6_181_264_1.20.1280.20 Mainly Alpha;Up-down Bundle;Monooxygenase;HscB, C-terminal domain 0.6093 174 251 1.20.1280.20
ID Description Score Start End GO Terms
AF-A0A2S7XN40-F1-model_v4 ImpA N-terminal domain-containing protein 0.9014 68 232
AF-A0A2S7XN40-F1-model_v4 ImpA N-terminal domain-containing protein 0.8711 68 232
AF-A0A143PIN3-F1-model_v4 Type VI secretion-associated protein, ImpA family 0.864 4 349
AF-A0A143PIN3-F1-model_v4 Type VI secretion-associated protein, ImpA family 0.8544 4 349
AF-K0VDY6-F1-model_v4 ImpA N-terminal domain-containing protein 0.8492 7 252

Map