F376609

General Info

Members Datasets Scaffolds Average Seq Length
269 210 229 519

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2939631187|2939635597
Length 552
Sequence PHTSTPAPNHAHSGVHRTMETLTKGASQQEALDTWQDELQELQKRHEFAEKMGGQEAIAKQHGANRLTVRERITQLADQASFQEVGKLTGQGHYVDGKLQSVTPAPYVMGLATIDGRPVAIGGEDFTIRGGSSWSGDRKKGGQGGFVEDLALDYRIPLVNLIDGAGGSVTSHKRRGHAVFPGVHGFETSVELMSVAPVVSAVLGTAAGGPAGRAILSHWSVMTRDTSQIFAAGPPVVERSLGQKISKEELGGHKAASDMAGLVHNVAADEAECFEMIRRYLSYMPNNVWELPPTVDMQDPPERAEEALRTIVPKDRRKPYNMRKLISLVVDKESIFEIQPTYGKAVITSLARMNGKVVGVVANNPMVHGGALDVKSSRKQTHFIQLCDTFHIPLIFLVDVPGFMVGKDAELAGTLREGMRSVYVAMQATVPILTVVVRKCYGMAGMAATDKNGIGLKLAWPSAEWGSLPVEGGVAAAYKREIAAAADPKQRERELEAELRELTSPFRTAEAFGVEDIIDPSETRRYLCRFIDAAQGRLKSTLGPKLRSGVLP

Samples

Sample ID Description Type Environment
1 2643221731 Bacillus sp. Root147 Isolate Unclassified
2 2643221732 Bacillus sp. Root239 Isolate Unclassified
3 2738541299 Paenisporosarcina sp. OV554 Isolate Unclassified
4 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
5 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
6 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
7 2842882022 Bacillus sp. R-71893 Isolate Unclassified
8 2852673933 Sporosarcina sp. JAI121 Isolate Rhizosphere
9 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
10 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
11 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
12 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
13 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
14 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
15 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
16 2919720352 Priestia megaterium 4340 Isolate Unclassified
17 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
18 2928510474 Sporosarcina psychrophila 1288 Isolate Rhizosphere
19 2929004312 Priestia megaterium 1104 Isolate Unclassified
20 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
21 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
22 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
23 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
24 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
25 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
26 3001267043 Bacillus sp. FJAT-49870 Isolate Rhizosphere
27 3001272096 Lederbergia citrisecunda FJAT-49732 Isolate Rhizosphere
28 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
29 3006826541 Bacillus haikouensis CrR16 Isolate Unclassified
30 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
31 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
32 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
33 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
34 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
35 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
36 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
37 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
38 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
39 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
40 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
41 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
42 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
43 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
44 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
45 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
46 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
47 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
48 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
49 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
50 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
51 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
52 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
53 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
54 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
55 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
56 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
57 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
58 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
59 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
60 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
61 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
62 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
63 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
64 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
65 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
66 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
67 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
68 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
69 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
70 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
71 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
72 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
73 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
74 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
75 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
76 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
77 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
78 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
79 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
80 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
81 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
82 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
83 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
84 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
85 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
86 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
87 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
92 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
93 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
94 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
95 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
96 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
97 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
98 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
99 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
102 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
135 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
137 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
138 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
139 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
140 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
141 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
142 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
143 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
144 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
145 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
146 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
149 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
150 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
151 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
152 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
153 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
154 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
155 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
156 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
157 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
158 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
163 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
164 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
165 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
166 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
171 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
172 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
173 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
174 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
175 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
176 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
177 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
182 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
183 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
188 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
189 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
190 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
191 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
192 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
198 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
199 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
200 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
201 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
202 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
203 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
204 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
205 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
206 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
207 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
208 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
209 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere
210 8057632132 Cytobacillus kochii RZ2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.39
Metatranscriptomes 0.74
Isolates 14.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.72
Nodule 0
Rhizoplane 8.18
Rhizosphere 75.84
Stem 0
Stem Tuber 0
Unclassified 12.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10003500 3300003316 Bacteria 21273
2 rootH2_10161231 3300003320 Bacteria 3190
3 rootL2_10041418 3300003322 Bacteria 7342
4 rootH1_10081995 3300003323 Bacteria 2899
5 Ga0070658_10008645 3300005327 Bacteria 8183
6 Ga0070658_10029516 3300005327 Bacteria 4406
7 Ga0070676_10027361 3300005328 Bacteria 3233
8 Ga0070690_100035363 3300005330 Bacteria 3134
9 Ga0070690_100045731 3300005330 Bacteria 2781
10 Ga0070670_100031176 3300005331 Bacteria 4591
11 Ga0070677_10003105 3300005333 Bacteria 5337
12 Ga0070666_10007490 3300005335 Bacteria 6727
13 Ga0070680_100004156 3300005336 Bacteria 10845
14 Ga0068868_100043373 3300005338 Unclassified 3513
15 Ga0070689_100009392 3300005340 Bacteria 6932
16 Ga0070689_100083164 3300005340 Bacteria 2515
17 Ga0070687_100072896 3300005343 Bacteria 1849
18 Ga0070692_10025268 3300005345 Bacteria 2926
19 Ga0070675_100024623 3300005354 Bacteria 4820
20 Ga0070675_100088712 3300005354 Bacteria 2588
21 Ga0070671_100013200 3300005355 Bacteria 6655
22 Ga0070671_100042020 3300005355 Bacteria 3800
23 Ga0070673_100019228 3300005364 Bacteria 4902
24 Ga0070673_100042089 3300005364 Bacteria 3519
25 Ga0070667_100056455 3300005367 Bacteria 3317
26 Ga0070700_100029984 3300005441 Bacteria 3247
27 Ga0070700_100046511 3300005441 Bacteria 2681
28 Ga0070700_100095042 3300005441 Bacteria 1953
29 Ga0070694_100055671 3300005444 Bacteria 2683
30 Ga0070678_100071550 3300005456 Bacteria 2596
31 Ga0070681_10064526 3300005458 Bacteria 3632
32 Ga0070685_10038407 3300005466 Unclassified 2715
33 Ga0070698_100123947 3300005471 Bacteria 2541
34 Ga0070679_100230221 3300005530 Bacteria 1813
35 Ga0070684_100085018 3300005535 Bacteria 2805
36 Ga0070672_100024252 3300005543 Bacteria 4480
37 Ga0070686_100019402 3300005544 Bacteria 4005
38 Ga0070695_100001277 3300005545 Bacteria 13875
39 Ga0068855_100008229 3300005563 Bacteria 12605
40 Ga0068855_100102472 3300005563 Bacteria 3295
41 Ga0068855_100109215 3300005563 Bacteria 3177
42 Ga0070664_100065578 3300005564 Unclassified 3099
43 Ga0070664_100091255 3300005564 Bacteria 2637
44 Ga0068856_100066871 3300005614 Bacteria 3551
45 Ga0070702_100059124 3300005615 Bacteria 2223
46 Ga0068852_100005364 3300005616 Bacteria 9164
47 Ga0068864_100036978 3300005618 Bacteria 4163
48 Ga0068866_10004366 3300005718 Bacteria 5805
49 Ga0068863_100032914 3300005841 Bacteria 4939
50 Ga0068863_100188349 3300005841 Bacteria 1982
51 Ga0068858_100093603 3300005842 Bacteria 2798
52 Ga0068860_100019240 3300005843 Bacteria 6628
53 Ga0068862_100130903 3300005844 Bacteria 2219
54 Ga0081455_10000893 3300005937 Bacteria 38471
55 Ga0075368_10002076 3300006042 Bacteria 6477
56 Ga0075364_10002409 3300006051 Bacteria 10489
57 Ga0075367_10008745 3300006178 Bacteria 5261
58 Ga0097621_100016685 3300006237 Bacteria 5559
59 Ga0097621_100022285 3300006237 Unclassified 4915
60 Ga0097621_100045606 3300006237 Bacteria 3541
61 Ga0068871_100024259 3300006358 Bacteria 4700
62 Ga0105240_10043518 3300009093 Bacteria 5713
63 Ga0114129_10031733 3300009147 Bacteria 7467
64 Ga0105243_10001416 3300009148 Bacteria 21200
65 Ga0105243_10030366 3300009148 Bacteria 4160
66 Ga0105248_10109601 3300009177 Bacteria 3113
67 Ga0105238_10006013 3300009551 Bacteria 12029
68 Ga0105238_10020829 3300009551 Bacteria 6679
69 Ga0105246_10011421 3300011119 Bacteria 5511
70 Ga0157371_10001288 3300013102 Bacteria 26430
71 Ga0157371_10056857 3300013102 Bacteria 2774
72 Ga0157371_10061303 3300013102 Bacteria 2667
73 Ga0157370_10004460 3300013104 Bacteria 16037
74 Ga0157370_10012111 3300013104 Bacteria 8971
75 Ga0157369_10001992 3300013105 Bacteria 24587
76 Ga0157374_10086348 3300013296 Unclassified 2985
77 Ga0157374_10275428 3300013296 Bacteria 1660
78 Ga0157378_10016989 3300013297 Bacteria 6380
79 Ga0157372_10000468 3300013307 Bacteria 44530
80 Ga0157372_10014455 3300013307 Bacteria 8446
81 Ga0157375_10031310 3300013308 Bacteria 5026
82 Ga0163163_10139563 3300014325 Bacteria 2466
83 Ga0157377_10006576 3300014745 Bacteria 5551
84 Ga0157376_10043216 3300014969 Bacteria 3697
85 Ga0157376_10080470 3300014969 Bacteria 2795
86 Ga0163161_10069087 3300017792 Bacteria 2582
87 Ga0209147_100147 3300025229 Bacteria 103478
88 Ga0209673_1005089 3300025273 Bacteria 6756
89 Ga0209758_1002756 3300025297 Bacteria 17221
90 Ga0207697_10001988 3300025315 Bacteria 10854
91 Ga0207696_1004390 3300025711 Bacteria 6093
92 Ga0207655_1023565 3300025728 Bacteria 3049
93 Ga0207713_1005818 3300025735 Bacteria 7631
94 Ga0207682_10005920 3300025893 Bacteria 4948
95 Ga0207645_10007867 3300025907 Bacteria 7496
96 Ga0207705_10010024 3300025909 Bacteria 6898
97 Ga0207705_10027188 3300025909 Bacteria 4078
98 Ga0207654_10058144 3300025911 Bacteria 2250
99 Ga0207707_10007439 3300025912 Bacteria 9541
100 Ga0207695_10039110 3300025913 Bacteria 5100
101 Ga0207695_10084054 3300025913 Bacteria 3214
102 Ga0207652_10096880 3300025921 Bacteria 2599
103 Ga0207652_10160742 3300025921 Bacteria 2014
104 Ga0207694_10060307 3300025924 Bacteria 2953
105 Ga0207659_10006272 3300025926 Bacteria 7276
106 Ga0207659_10014715 3300025926 Bacteria 5053
107 Ga0207659_10077134 3300025926 Bacteria 2452
108 Ga0207644_10013275 3300025931 Bacteria 5489
109 Ga0207644_10035383 3300025931 Unclassified 3499
110 Ga0207706_10016501 3300025933 Bacteria 6665
111 Ga0207670_10109525 3300025936 Bacteria 1988
112 Ga0207691_10013758 3300025940 Bacteria 7731
113 Ga0207691_10053667 3300025940 Bacteria 3679
114 Ga0207711_10036880 3300025941 Bacteria 4149
115 Ga0207689_10027131 3300025942 Bacteria 4794
116 Ga0207689_10080061 3300025942 Bacteria 2685
117 Ga0207661_10021022 3300025944 Bacteria 4887
118 Ga0207661_10029127 3300025944 Bacteria 4237
119 Ga0207679_10036303 3300025945 Bacteria 3495
120 Ga0207667_10023712 3300025949 Bacteria 6756
121 Ga0207667_10082910 3300025949 Bacteria 3320
122 Ga0207658_10112497 3300025986 Bacteria 2155
123 Ga0207677_10020943 3300026023 Unclassified 3984
124 Ga0207703_10024983 3300026035 Bacteria 4699
125 Ga0207703_10150274 3300026035 Bacteria 2030
126 Ga0207708_10006769 3300026075 Bacteria 8481
127 Ga0207708_10025571 3300026075 Bacteria 4468
128 Ga0207708_10037946 3300026075 Unclassified 3670
129 Ga0207708_10144964 3300026075 Bacteria 1865
130 Ga0207648_10006246 3300026089 Bacteria 11863
131 Ga0207648_10096979 3300026089 Bacteria 2580
132 Ga0207676_10004561 3300026095 Bacteria 9810
133 Ga0207674_10043282 3300026116 Bacteria 4643
134 Ga0207675_100024998 3300026118 Bacteria 5557
135 Ga0207683_10016319 3300026121 Bacteria 6321
136 Ga0207698_10041155 3300026142 Unclassified 3440
137 Ga0209813_10001422 3300027866 Bacteria 5410
138 Ga0268264_10021087 3300028381 Bacteria 5324
139 Ga0268264_10022472 3300028381 Bacteria 5150
140 Ga0265330_10008726 3300031235 Bacteria 4860
141 Ga0265331_10004411 3300031250 Bacteria 8795
142 Ga0265327_10036260 3300031251 Bacteria 2713
143 Ga0265327_10045451 3300031251 Bacteria 2333
144 Ga0307408_100062936 3300031548 Bacteria 2713
145 Ga0316579_10055209 3300031691 Bacteria 1863
146 Ga0265314_10000916 3300031711 Bacteria 34747
147 Ga0265342_10025713 3300031712 Bacteria 3696
148 Ga0316582_0005383 3300036647 Bacteria 6584
149 Ga0316582_0052727 3300036647 Bacteria 2586
150 Ga0395899_0008095 3300037312 Bacteria 8096
151 Ga0395900_0078152 3300037418 Bacteria 3400
152 Ga0395900_0118369 3300037418 Bacteria 2718
153 Ga0395900_0120817 3300037418 Bacteria 2688
154 Ga0395898_0006238 3300037466 Bacteria 12765
155 Ga0395898_0028488 3300037466 Bacteria 5595
156 Ga0395898_0036171 3300037466 Bacteria 4904
157 Ga0395898_0050690 3300037466 Bacteria 4061
158 Ga0395905_0000902 3300037471 Bacteria 38700
159 Ga0316581_0010214 3300037588 Unclassified 2599
160 Ga0395901_0012550 3300038443 Bacteria 8598
161 Ga0400483_218675 3300039062 Bacteria 2779
162 Ga0495650_0000063 3300046471 Bacteria 277841
163 Ga0495580_0007445 3300046472 Bacteria 8799
164 Ga0495666_0000522 3300046526 Bacteria 17099
165 Ga0495642_0027198 3300046528 Bacteria 2275
166 Ga0495597_0000271 3300046542 Bacteria 47044
167 Ga0495658_0026083 3300046683 Bacteria 3129
168 Ga0495624_0020069 3300046690 Bacteria 4453
169 Ga0496100_0007418 3300048903 Bacteria 6049
170 Ga0496102_0000858 3300048905 Bacteria 29211
171 Ga0496103_0001421 3300048906 Bacteria 16048
172 Ga0496104_0000211 3300048907 Bacteria 51798
173 Ga0496104_0000478 3300048907 Bacteria 34476
174 Ga0496104_0016371 3300048907 Bacteria 6734
175 Ga0496104_0017587 3300048907 Bacteria 6514
176 Ga0496105_0011433 3300048908 Bacteria 7013
177 Ga0496106_0000311 3300048909 Bacteria 34260
178 Ga0496107_0000301 3300048910 Bacteria 26448
179 Ga0496108_0020390 3300048911 Bacteria 5449
180 Ga0496109_0000685 3300048912 Bacteria 28223
181 Ga0496109_0160235 3300048912 Bacteria 2108
182 Ga0496110_0001085 3300048913 Bacteria 19158
183 Ga0496110_0096603 3300048913 Bacteria 2648
184 Ga0496111_0000104 3300048914 Bacteria 36668
185 Ga0496112_0008434 3300048915 Bacteria 9228
186 Ga0496112_0116141 3300048915 Bacteria 2647
187 Ga0496113_0000909 3300048916 Bacteria 15622
188 Ga0496113_0064847 3300048916 Bacteria 2763
189 Ga0496114_0191119 3300048917 Bacteria 1791
190 Ga0496115_0009408 3300048918 Bacteria 7261
191 Ga0496116_0001800 3300048919 Bacteria 23291
192 Ga0496117_0057256 3300048920 Bacteria 2709
193 Ga0496119_0010279 3300048922 Bacteria 7888
194 Ga0496120_0070499 3300048923 Bacteria 1922
195 Ga0496121_0001375 3300048924 Bacteria 41255
196 Ga0496124_0050241 3300048927 Bacteria 3555
197 Ga0496125_0014010 3300048928 Bacteria 7842
198 Ga0496125_0028805 3300048928 Bacteria 5005
199 Ga0496126_0003328 3300048929 Bacteria 20436
200 Ga0501305_003252 3300049161 Bacteria 1828
201 Ga0501312_001362 3300049528 Bacteria 2374
202 Ga0501034_0053008 3300049571 Bacteria 4086
203 Ga0501036_0132050 3300049572 Bacteria 2108
204 Ga0501042_0171290 3300049578 Bacteria 1566
205 Ga0501047_0078764 3300049581 Bacteria 3169
206 Ga0501069_0026976 3300049585 Bacteria 3147
207 Ga0501070_0014672 3300049586 Bacteria 6593
208 Ga0501072_0157106 3300049588 Bacteria 1813
209 Ga0501072_0171839 3300049588 Bacteria 1730
210 Ga0501074_0078620 3300049590 Bacteria 2367
211 Ga0501079_0034162 3300049741 Bacteria 3913
212 Ga0501081_0072908 3300049743 Bacteria 2394
213 Ga0501081_0086863 3300049743 Bacteria 2196
214 Ga0501083_0014323 3300049744 Bacteria 5547
215 Ga0501035_0008112 3300049822 Bacteria 9788
216 Ga0501044_0011269 3300049823 Bacteria 9690
217 Ga0501044_0102946 3300049823 Bacteria 2870
218 Ga0501045_0075546 3300049824 Bacteria 2482
219 nmdc:mga00v17_384_c1 3300050491 Bacteria 25029
220 nmdc:mga06z11_2040_c1 3300050494 Bacteria 7659
221 nmdc:mga04h51_18191_c1 3300050495 Bacteria 2066
222 nmdc:mga05p37_105140_c1 3300050507 Unclassified 3473
223 nmdc:mga09592_118695_c1 3300050508 Bacteria 2270
224 Ga0501084_0052467 3300054114 Bacteria 3412
225 Ga0501084_0112935 3300054114 Bacteria 2283
226 Ga0501082_0038253 3300060353 Bacteria 4139
227 Ga0501082_0149176 3300060353 Bacteria 2031
228 Ga0530510_0051152 3300061734 Bacteria 2985
229 Ga0530510_0082968 3300061734 Bacteria 2334

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005471 Ga0070698_100123947 Ga0070698_1001239473 405
2 3300013102 Ga0157371_10061303 Ga0157371_100613033 415
3 3300048907 Ga0496104_0017587 Ga0496104_0017587_3761_5095 433
4 3300048912 Ga0496109_0160235 Ga0496109_0160235_626_1960 433
5 3300049578 Ga0501042_0171290 Ga0501042_0171290_30_1397 439
6 3300046542 Ga0495597_0000271 Ga0495597_0000271_11975_13543 483
7 3300037418 Ga0395900_0118369 Ga0395900_0118369_291_1826 487
8 3300005563 Ga0068855_100102472 Ga0068855_1001024722 490
9 3300013104 Ga0157370_10004460 Ga0157370_100044608 490
10 3300026035 Ga0207703_10150274 Ga0207703_101502742 490
11 3300037418 Ga0395900_0120817 Ga0395900_0120817_632_2245 490
12 3300037466 Ga0395898_0036171 Ga0395898_0036171_1815_3428 490
13 3300038443 Ga0395901_0012550 Ga0395901_0012550_5172_6785 490
14 3300037471 Ga0395905_0000902 Ga0395905_0000902_33568_35163 491
15 3300061734 Ga0530510_0082968 Ga0530510_0082968_699_2261 491
16 3300049581 Ga0501047_0078764 Ga0501047_0078764_1505_3061 494
17 3300054114 Ga0501084_0112935 Ga0501084_0112935_613_2169 494
18 3300046471 Ga0495650_0000063 Ga0495650_0000063_30603_32138 495
19 3300049744 Ga0501083_0014323 Ga0501083_0014323_91_1647 495
20 iso_pu_bacteria 2881412998 2881417963 495
21 iso_pu_bacteria 8055225921 8055227729 495
22 3300005327 Ga0070658_10008645 Ga0070658_100086455 498
23 3300005336 Ga0070680_100004156 Ga0070680_1000041563 498
24 3300005458 Ga0070681_10064526 Ga0070681_100645263 498
25 3300005614 Ga0068856_100066871 Ga0068856_1000668712 498
26 3300009093 Ga0105240_10043518 Ga0105240_100435183 498
27 3300025909 Ga0207705_10010024 Ga0207705_100100245 498
28 3300025912 Ga0207707_10007439 Ga0207707_100074398 498
29 3300025921 Ga0207652_10096880 Ga0207652_100968802 498
30 3300031251 Ga0265327_10036260 Ga0265327_100362602 499
31 3300031251 Ga0265327_10045451 Ga0265327_100454512 500
32 3300005340 Ga0070689_100083164 Ga0070689_1000831642 501
33 3300005441 Ga0070700_100046511 Ga0070700_1000465113 501
34 3300005466 Ga0070685_10038407 Ga0070685_100384072 501
35 3300005844 Ga0068862_100130903 Ga0068862_1001309032 501
36 3300009147 Ga0114129_10031733 Ga0114129_100317339 501
37 3300017792 Ga0163161_10069087 Ga0163161_100690872 501
38 3300025936 Ga0207670_10109525 Ga0207670_101095251 501
39 3300026075 Ga0207708_10037946 Ga0207708_100379462 501
40 3300049823 Ga0501044_0102946 Ga0501044_0102946_798_2393 501
41 3300050507 nmdc:mga05p37_105140_c1 nmdc:mga05p37_105140_c1_1376_2926 501
42 3300050508 nmdc:mga09592_118695_c1 nmdc:mga09592_118695_c1_184_1734 501
43 iso_pu_bacteria 8048746797 8048747572 501
44 3300005327 Ga0070658_10029516 Ga0070658_100295164 502
45 3300005328 Ga0070676_10027361 Ga0070676_100273612 502
46 3300005330 Ga0070690_100035363 Ga0070690_1000353632 502
47 3300005331 Ga0070670_100031176 Ga0070670_1000311763 502
48 3300005333 Ga0070677_10003105 Ga0070677_100031053 502
49 3300005335 Ga0070666_10007490 Ga0070666_100074905 502
50 3300005338 Ga0068868_100043373 Ga0068868_1000433732 502
51 3300005340 Ga0070689_100009392 Ga0070689_1000093923 502
52 3300005354 Ga0070675_100024623 Ga0070675_1000246233 502
53 3300005354 Ga0070675_100088712 Ga0070675_1000887122 502
54 3300005355 Ga0070671_100013200 Ga0070671_1000132002 502
55 3300005355 Ga0070671_100042020 Ga0070671_1000420202 502
56 3300005364 Ga0070673_100019228 Ga0070673_1000192283 502
57 3300005364 Ga0070673_100042089 Ga0070673_1000420891 502
58 3300005367 Ga0070667_100056455 Ga0070667_1000564553 502
59 3300005456 Ga0070678_100071550 Ga0070678_1000715502 502
60 3300005530 Ga0070679_100230221 Ga0070679_1002302212 502
61 3300005543 Ga0070672_100024252 Ga0070672_1000242523 502
62 3300005563 Ga0068855_100109215 Ga0068855_1001092153 502
63 3300005564 Ga0070664_100065578 Ga0070664_1000655782 502
64 3300005615 Ga0070702_100059124 Ga0070702_1000591241 502
65 3300005618 Ga0068864_100036978 Ga0068864_1000369782 502
66 3300005718 Ga0068866_10004366 Ga0068866_100043663 502
67 3300005841 Ga0068863_100032914 Ga0068863_1000329143 502
68 3300006237 Ga0097621_100016685 Ga0097621_1000166853 502
69 3300006237 Ga0097621_100022285 Ga0097621_1000222852 502
70 3300006237 Ga0097621_100045606 Ga0097621_1000456063 502
71 3300006358 Ga0068871_100024259 Ga0068871_1000242592 502
72 3300009148 Ga0105243_10030366 Ga0105243_100303664 502
73 3300009177 Ga0105248_10109601 Ga0105248_101096013 502
74 3300009551 Ga0105238_10020829 Ga0105238_100208295 502
75 3300013105 Ga0157369_10001992 Ga0157369_1000199223 502
76 3300013296 Ga0157374_10086348 Ga0157374_100863482 502
77 3300013297 Ga0157378_10016989 Ga0157378_100169895 502
78 3300013307 Ga0157372_10000468 Ga0157372_1000046830 502
79 3300013308 Ga0157375_10031310 Ga0157375_100313103 502
80 3300014969 Ga0157376_10043216 Ga0157376_100432162 502
81 3300014969 Ga0157376_10080470 Ga0157376_100804703 502
82 3300025297 Ga0209758_1002756 Ga0209758_100275610 502
83 3300025315 Ga0207697_10001988 Ga0207697_100019889 502
84 3300025893 Ga0207682_10005920 Ga0207682_100059203 502
85 3300025907 Ga0207645_10007867 Ga0207645_100078675 502
86 3300025913 Ga0207695_10039110 Ga0207695_100391105 502
87 3300025921 Ga0207652_10160742 Ga0207652_101607421 502
88 3300025924 Ga0207694_10060307 Ga0207694_100603073 502
89 3300025926 Ga0207659_10006272 Ga0207659_100062722 502
90 3300025926 Ga0207659_10014715 Ga0207659_100147152 502
91 3300025926 Ga0207659_10077134 Ga0207659_100771341 502
92 3300025931 Ga0207644_10013275 Ga0207644_100132753 502
93 3300025931 Ga0207644_10035383 Ga0207644_100353832 502
94 3300025933 Ga0207706_10016501 Ga0207706_100165013 502
95 3300025940 Ga0207691_10013758 Ga0207691_100137583 502
96 3300025940 Ga0207691_10053667 Ga0207691_100536673 502
97 3300025941 Ga0207711_10036880 Ga0207711_100368802 502
98 3300025942 Ga0207689_10027131 Ga0207689_100271312 502
99 3300025944 Ga0207661_10021022 Ga0207661_100210223 502
100 3300025949 Ga0207667_10082910 Ga0207667_100829103 502
101 3300025986 Ga0207658_10112497 Ga0207658_101124971 502
102 3300026023 Ga0207677_10020943 Ga0207677_100209432 502
103 3300026035 Ga0207703_10024983 Ga0207703_100249832 502
104 3300026075 Ga0207708_10006769 Ga0207708_100067695 502
105 3300026089 Ga0207648_10006246 Ga0207648_100062469 502
106 3300026089 Ga0207648_10096979 Ga0207648_100969792 502
107 3300026095 Ga0207676_10004561 Ga0207676_100045612 502
108 3300026121 Ga0207683_10016319 Ga0207683_100163194 502
109 3300026142 Ga0207698_10041155 Ga0207698_100411552 502
110 3300028381 Ga0268264_10021087 Ga0268264_100210873 502
111 3300031235 Ga0265330_10008726 Ga0265330_100087262 502
112 3300031250 Ga0265331_10004411 Ga0265331_100044114 502
113 3300031691 Ga0316579_10055209 Ga0316579_100552092 502
114 3300031711 Ga0265314_10000916 Ga0265314_1000091610 502
115 3300031712 Ga0265342_10025713 Ga0265342_100257133 502
116 3300036647 Ga0316582_0005383 Ga0316582_0005383_3274_4839 502
117 3300036647 Ga0316582_0052727 Ga0316582_0052727_37_1599 502
118 3300039062 Ga0400483_218675 Ga0400483_218675_652_2217 502
119 3300046528 Ga0495642_0027198 Ga0495642_0027198_318_1880 502
120 3300046683 Ga0495658_0026083 Ga0495658_0026083_432_1994 502
121 3300048924 Ga0496121_0001375 Ga0496121_0001375_6070_7632 502
122 3300049585 Ga0501069_0026976 Ga0501069_0026976_713_2275 502
123 3300049586 Ga0501070_0014672 Ga0501070_0014672_130_1692 502
124 3300049588 Ga0501072_0157106 Ga0501072_0157106_40_1614 502
125 3300049588 Ga0501072_0171839 Ga0501072_0171839_32_1594 502
126 3300049590 Ga0501074_0078620 Ga0501074_0078620_520_2082 502
127 3300049743 Ga0501081_0086863 Ga0501081_0086863_205_1770 502
128 3300049824 Ga0501045_0075546 Ga0501045_0075546_110_1684 502
129 iso_pu_bacteria 2828305725 2828305928 502
130 3300005330 Ga0070690_100045731 Ga0070690_1000457311 503
131 3300005343 Ga0070687_100072896 Ga0070687_1000728961 503
132 3300005345 Ga0070692_10025268 Ga0070692_100252682 503
133 3300005441 Ga0070700_100029984 Ga0070700_1000299842 503
134 3300005441 Ga0070700_100095042 Ga0070700_1000950421 503
135 3300005444 Ga0070694_100055671 Ga0070694_1000556712 503
136 3300005535 Ga0070684_100085018 Ga0070684_1000850182 503
137 3300005544 Ga0070686_100019402 Ga0070686_1000194023 503
138 3300005545 Ga0070695_100001277 Ga0070695_1000012778 503
139 3300005563 Ga0068855_100008229 Ga0068855_1000082292 503
140 3300005564 Ga0070664_100091255 Ga0070664_1000912553 503
141 3300005616 Ga0068852_100005364 Ga0068852_1000053643 503
142 3300005841 Ga0068863_100188349 Ga0068863_1001883492 503
143 3300005842 Ga0068858_100093603 Ga0068858_1000936032 503
144 3300005843 Ga0068860_100019240 Ga0068860_1000192405 503
145 3300005937 Ga0081455_10000893 Ga0081455_100008932 503
146 3300006042 Ga0075368_10002076 Ga0075368_100020764 503
147 3300006051 Ga0075364_10002409 Ga0075364_100024097 503
148 3300006178 Ga0075367_10008745 Ga0075367_100087454 503
149 3300009551 Ga0105238_10006013 Ga0105238_100060137 503
150 3300013104 Ga0157370_10012111 Ga0157370_100121118 503
151 3300013307 Ga0157372_10014455 Ga0157372_100144556 503
152 3300014325 Ga0163163_10139563 Ga0163163_101395632 503
153 3300025909 Ga0207705_10027188 Ga0207705_100271883 503
154 3300025911 Ga0207654_10058144 Ga0207654_100581442 503
155 3300025913 Ga0207695_10084054 Ga0207695_100840542 503
156 3300025942 Ga0207689_10080061 Ga0207689_100800613 503
157 3300025944 Ga0207661_10029127 Ga0207661_100291274 503
158 3300025945 Ga0207679_10036303 Ga0207679_100363034 503
159 3300025949 Ga0207667_10023712 Ga0207667_100237126 503
160 3300026075 Ga0207708_10025571 Ga0207708_100255714 503
161 3300026075 Ga0207708_10144964 Ga0207708_101449642 503
162 3300026116 Ga0207674_10043282 Ga0207674_100432822 503
163 3300026118 Ga0207675_100024998 Ga0207675_1000249985 503
164 3300027866 Ga0209813_10001422 Ga0209813_100014224 503
165 3300028381 Ga0268264_10022472 Ga0268264_100224724 503
166 3300037312 Ga0395899_0008095 Ga0395899_0008095_2333_3919 503
167 3300037418 Ga0395900_0078152 Ga0395900_0078152_931_2517 503
168 3300037466 Ga0395898_0006238 Ga0395898_0006238_11029_12615 503
169 3300037466 Ga0395898_0028488 Ga0395898_0028488_2190_3803 503
170 3300037466 Ga0395898_0050690 Ga0395898_0050690_1021_2607 503
171 3300037588 Ga0316581_0010214 Ga0316581_0010214_894_2462 503
172 3300046472 Ga0495580_0007445 Ga0495580_0007445_6803_8383 503
173 3300046526 Ga0495666_0000522 Ga0495666_0000522_10790_12370 503
174 3300046690 Ga0495624_0020069 Ga0495624_0020069_2054_3634 503
175 3300048907 Ga0496104_0000211 Ga0496104_0000211_48099_49706 503
176 3300048907 Ga0496104_0016371 Ga0496104_0016371_2542_4149 503
177 3300048908 Ga0496105_0011433 Ga0496105_0011433_3986_5593 503
178 3300048913 Ga0496110_0096603 Ga0496110_0096603_69_1673 503
179 3300048915 Ga0496112_0116141 Ga0496112_0116141_148_1752 503
180 3300048916 Ga0496113_0064847 Ga0496113_0064847_745_2340 503
181 3300048917 Ga0496114_0191119 Ga0496114_0191119_48_1655 503
182 3300048918 Ga0496115_0009408 Ga0496115_0009408_2758_4365 503
183 3300048928 Ga0496125_0028805 Ga0496125_0028805_2706_4394 503
184 3300049571 Ga0501034_0053008 Ga0501034_0053008_2453_4039 503
185 3300049822 Ga0501035_0008112 Ga0501035_0008112_3040_4644 503
186 3300049823 Ga0501044_0011269 Ga0501044_0011269_4407_6011 503
187 3300050491 nmdc:mga00v17_384_c1 nmdc:mga00v17_384_c1_9086_10687 503
188 3300050494 nmdc:mga06z11_2040_c1 nmdc:mga06z11_2040_c1_3961_5568 503
189 3300050495 nmdc:mga04h51_18191_c1 nmdc:mga04h51_18191_c1_328_1935 503
190 3300060353 Ga0501082_0149176 Ga0501082_0149176_218_1810 503
191 iso_pu_bacteria 2881927736 2881931422 503
192 iso_pu_bacteria 2939631187 2939635597 503
193 3300049572 Ga0501036_0132050 Ga0501036_0132050_513_2084 504
194 3300049741 Ga0501079_0034162 Ga0501079_0034162_937_2508 504
195 3300049743 Ga0501081_0072908 Ga0501081_0072908_769_2340 504
196 3300054114 Ga0501084_0052467 Ga0501084_0052467_505_2076 504
197 3300060353 Ga0501082_0038253 Ga0501082_0038253_1814_3385 504
198 3300061734 Ga0530510_0051152 Ga0530510_0051152_374_1960 504
199 iso_pu_bacteria 3001267043 3001267509 506
200 iso_pu_bacteria 3001272096 3001272978 506
201 iso_pu_bacteria 3006969106 3006970749 506
202 iso_pu_bacteria 3006988479 3006989728 506
203 iso_pu_bacteria 2808606364 2808868439 507
204 iso_pu_bacteria 2881644220 2881647711 508
205 iso_pu_bacteria 3006973921 3006974723 508
206 iso_pu_bacteria 3006984091 3006985631 508
207 iso_pu_bacteria 2643221731 2644716027 509
208 iso_pu_bacteria 2643221732 2644724103 509
209 iso_pu_bacteria 2738541299 2738837543 509
210 iso_pu_bacteria 2818991465 2819709499 509
211 iso_pu_bacteria 2842882022 2842884250 509
212 iso_pu_bacteria 2904524088 2904524721 509
213 iso_pu_bacteria 2919143609 2919146683 509
214 iso_pu_bacteria 2919414237 2919414684 509
215 iso_pu_bacteria 2919517244 2919518606 509
216 iso_pu_bacteria 2919720352 2919722973 509
217 iso_pu_bacteria 2928093941 2928096499 509
218 iso_pu_bacteria 2929004312 2929006126 509
219 iso_pu_bacteria 2936361878 2936365165 509
220 iso_pu_bacteria 2960319331 2960320597 509
221 iso_pu_bacteria 2960375949 2960380669 509
222 iso_pu_bacteria 2977254563 2977258418 509
223 iso_pu_bacteria 2990275345 2990279453 509
224 iso_pu_bacteria 3001892409 3001893597 509
225 iso_pu_bacteria 3006826541 3006830994 509
226 iso_pu_bacteria 3006978542 3006979107 509
227 iso_pu_bacteria 8022893055 8022897923 509
228 iso_pu_bacteria 8022914991 8022917104 509
229 iso_pu_bacteria 8054280661 8054282025 509
230 iso_pu_bacteria 8057632132 8057634081 509
231 iso_pu_bacteria 2852673933 2852674901 512
232 iso_pu_bacteria 2928510474 2928511598 512
233 3300003316 rootH1_10003500 rootH1_100035008 513
234 3300003320 rootH2_10161231 rootH2_101612312 513
235 3300003322 rootL2_10041418 rootL2_100414183 513
236 3300003323 rootH1_10081995 rootH1_100819952 513
237 3300009148 Ga0105243_10001416 Ga0105243_1000141616 513
238 3300011119 Ga0105246_10011421 Ga0105246_100114213 513
239 3300013102 Ga0157371_10001288 Ga0157371_1000128824 513
240 3300013102 Ga0157371_10056857 Ga0157371_100568572 513
241 3300013296 Ga0157374_10275428 Ga0157374_102754281 513
242 3300014745 Ga0157377_10006576 Ga0157377_100065764 513
243 3300025229 Ga0209147_100147 Ga0209147_10014781 513
244 3300025273 Ga0209673_1005089 Ga0209673_10050898 513
245 3300025711 Ga0207696_1004390 Ga0207696_10043906 513
246 3300025728 Ga0207655_1023565 Ga0207655_10235652 513
247 3300025735 Ga0207713_1005818 Ga0207713_10058185 513
248 3300031548 Ga0307408_100062936 Ga0307408_1000629362 513
249 3300048903 Ga0496100_0007418 Ga0496100_0007418_2712_4253 513
250 3300048905 Ga0496102_0000858 Ga0496102_0000858_15025_16566 513
251 3300048906 Ga0496103_0001421 Ga0496103_0001421_12711_14252 513
252 3300048907 Ga0496104_0000478 Ga0496104_0000478_5689_7230 513
253 3300048909 Ga0496106_0000311 Ga0496106_0000311_22382_23923 513
254 3300048910 Ga0496107_0000301 Ga0496107_0000301_3119_4660 513
255 3300048911 Ga0496108_0020390 Ga0496108_0020390_764_2305 513
256 3300048912 Ga0496109_0000685 Ga0496109_0000685_4148_5689 513
257 3300048913 Ga0496110_0001085 Ga0496110_0001085_12106_13647 513
258 3300048914 Ga0496111_0000104 Ga0496111_0000104_14854_16395 513
259 3300048915 Ga0496112_0008434 Ga0496112_0008434_5512_7053 513
260 3300048916 Ga0496113_0000909 Ga0496113_0000909_8570_10111 513
261 3300048919 Ga0496116_0001800 Ga0496116_0001800_14950_16491 513
262 3300048920 Ga0496117_0057256 Ga0496117_0057256_982_2523 513
263 3300048922 Ga0496119_0010279 Ga0496119_0010279_3769_5310 513
264 3300048923 Ga0496120_0070499 Ga0496120_0070499_108_1649 513
265 3300048927 Ga0496124_0050241 Ga0496124_0050241_1269_2810 513
266 3300048928 Ga0496125_0014010 Ga0496125_0014010_3360_4901 513
267 3300048929 Ga0496126_0003328 Ga0496126_0003328_9509_11050 513
268 3300049161 Ga0501305_003252 Ga0501305_003252_232_1773 513
269 3300049528 Ga0501312_001362 Ga0501312_001362_43_1584 513

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01039

Carboxyl_trans

Carboxyl transferase domain

60

548

0.92

PF03255

ACCA

Acetyl co-enzyme A carboxylase carboxyltransferase-like

339

451

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5inf-assembly1.cif.gz_B structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics 0.9318 24 513
5ini-assembly1.cif.gz_C structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics 0.9279 24 513
5ini-assembly1.cif.gz_E structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics 0.9257 24 513
5ini-assembly1.cif.gz_D structural basis for acyl-coa carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics 0.9227 24 513
5ing-assembly1.cif.gz_A a crotonyl-coa reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-coa polyketide synthase extender unit 0.9211 24 513
ID Description Score Start End Superfamily
af_O86318_1_265_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.946 7 241 3.90.226.10
af_Q20676_22_285_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9443 3 255 3.90.226.10
4l6wA02 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9432 265 494 3.90.226.10
af_Q9XUC3_1361_1542_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.94 287 394 3.90.226.10
af_O53578_4_260_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.9383 1 255 3.90.226.10
ID Description Score Start End GO Terms
AF-T1WR67-F1-model_v4 Acetyl-CoA/propionyl-CoA carboxylase 0.9929 142 247 GO:0004658
AF-A0A6P0ENC5-F1-model_v4 deleted 0.9894 316 406
AF-A0A6M0KVT3-F1-model_v4 deleted 0.9893 142 237
AF-K1TH44-F1-model_v4 Carboxyl transferase (EC 6.-.-.-) 0.9868 282 406 GO:0004658
GO:0016740
AF-A0A4V6X769-F1-model_v4 deleted 0.9835 91 206

Feature Viewer

pLDDT pTM Quality
90.96 0.92 High
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Predicted Structure (AlphaFold2)

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