F376132

General Info

Members Datasets Scaffolds Average Seq Length
269 194 538 496

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100090950|Ga0075428_1000909502
Length 544
Sequence MTRRRGPEGIPVLIALDPKASDPLSRQIYRALRDGILAGRLVGGLRLPSTRALAVDLGVSRTTVITAFDQLVAEGYVESRVGRGTRVSHTLPDHLLHARARPPMHVTESSPVNAASARGALLEAHARRKSSVAEGTIAFAPGVPALDLFPWPTWGRLVAARGRDLGPAVAGYADSLGYRPLREAVARYAAVARGVTCTADQVVIVGGSQQGLDLVARVATDPGDSAWIEDPGYHGALGALVAAGLRVAGVPVDADGVRVAAGRVAAPAARLMYVTPSHQFPLGVTMSLSRRLELLTAAREMRAWIVEDDYDSEFRYVSRPLTALQGLDRDGRVVYVGTFSKVMFPALRIGFVIAPPSLLPAIAAARQFAGMQQATLEQMVLADFISDGHFERHVRRMRAMYAERQQDLIDAVRVECVDLMDTAPAGSGMHLVGWLPPEADDADVSRRAAARGVDAIPLSAFAVGRGAGRPGVVLGYAHVDRAAMFAATRRLAAAIRESMAQRTVRPWGLGTGENGVRVEFHHSNADGRNACRPGATNRTGGATQ

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
22 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
36 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
52 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
53 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
54 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
55 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
63 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
68 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
123 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
124 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
125 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
126 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
127 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
128 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
129 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
132 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
137 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
140 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
150 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
151 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
154 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
155 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
159 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
169 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
170 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
171 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
172 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
173 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
174 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
175 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
176 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
178 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
179 2503198000 Mesorhizobium opportunistum WSM2075 Isolate Nodule
180 2509276022 Mesorhizobium australicum WSM2073 Isolate Nodule
181 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
182 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
183 2687453392 Mesorhizobium ciceri biserrulae WSM1284 Isolate Unclassified
184 2903448605 Mesorhizobium japonicum Opo-235 Isolate Nodule
185 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
186 2937822353 Mesorhizobium neociceri CCANP35 Isolate Nodule
187 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
188 2968083720 Mesorhizobium erdmanii Opo-242 Isolate Unclassified
189 2987666974 Mesorhizobium sp. WSM4306 Isolate Unclassified
190 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified
191 3000135777 Unclassified bacterium M00.F.Ca.ET.205.01.1.1 Isolate Unclassified
192 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
193 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
194 649633066 Mesorhizobium ciceri bv. biserrulae WSM1271 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.68
Metatranscriptomes 0.37
Isolates 5.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.6
Nodule 2.23
Rhizoplane 2.6
Rhizosphere 86.62
Stem 0
Stem Tuber 0
Unclassified 2.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100090950 3300006844 Bacteria 3329
2 rootL2_10066020 3300003322 Bacteria 9738
3 Ga0065707_10099560 3300005295 Bacteria 2996
4 Ga0070683_100016029 3300005329 Bacteria 6596
5 Ga0070683_100035599 3300005329 Bacteria 4551
6 Ga0070670_100001170 3300005331 Bacteria 20836
7 Ga0070680_100031674 3300005336 Bacteria 4252
8 Ga0070682_100001811 3300005337 Bacteria 11932
9 Ga0068868_100032077 3300005338 Bacteria 4039
10 Ga0070689_100100515 3300005340 Bacteria 2288
11 Ga0070689_100135698 3300005340 Bacteria 1976
12 Ga0070661_100008165 3300005344 Bacteria 7223
13 Ga0070692_10005210 3300005345 Bacteria 5511
14 Ga0070668_100012408 3300005347 Bacteria 6345
15 Ga0070669_100004000 3300005353 Bacteria 10653
16 Ga0070669_100129996 3300005353 Bacteria 1931
17 Ga0070675_100029324 3300005354 Bacteria 4437
18 Ga0070675_100052537 3300005354 Bacteria 3350
19 Ga0070671_100014072 3300005355 Bacteria 6459
20 Ga0070671_100030755 3300005355 Bacteria 4430
21 Ga0070671_100079264 3300005355 Bacteria 2745
22 Ga0070674_100095279 3300005356 Bacteria 2157
23 Ga0070673_100098603 3300005364 Bacteria 2402
24 Ga0070688_100004453 3300005365 Bacteria 7293
25 Ga0070688_100025398 3300005365 Bacteria 3507
26 Ga0070659_100023514 3300005366 Bacteria 4716
27 Ga0070667_100000196 3300005367 Bacteria 71680
28 Ga0070667_100052370 3300005367 Bacteria 3444
29 Ga0070703_10000121 3300005406 Bacteria 40241
30 Ga0070701_10042054 3300005438 Bacteria 2331
31 Ga0070694_100001664 3300005444 Bacteria 13064
32 Ga0070694_100017393 3300005444 Bacteria 4545
33 Ga0070663_100024990 3300005455 Bacteria 4028
34 Ga0070678_100012843 3300005456 Bacteria 5225
35 Ga0070681_10001337 3300005458 Bacteria 21573
36 Ga0070681_10003363 3300005458 Bacteria 14951
37 Ga0068867_100014978 3300005459 Bacteria 5496
38 Ga0070707_100045559 3300005468 Unclassified 4198
39 Ga0070698_100016506 3300005471 Bacteria 7791
40 Ga0070699_100094070 3300005518 Bacteria 2623
41 Ga0070679_100210280 3300005530 Bacteria 1909
42 Ga0070684_100032495 3300005535 Bacteria 4448
43 Ga0068853_100009844 3300005539 Bacteria 7714
44 Ga0068853_100030273 3300005539 Bacteria 4571
45 Ga0068853_100087407 3300005539 Bacteria 2735
46 Ga0070672_100022597 3300005543 Bacteria 4624
47 Ga0070693_100001573 3300005547 Bacteria 10285
48 Ga0070665_100025046 3300005548 Bacteria 6015
49 Ga0068855_100002783 3300005563 Bacteria 21522
50 Ga0068855_100101182 3300005563 Bacteria 3318
51 Ga0070664_100009125 3300005564 Bacteria 8050
52 Ga0070664_100082863 3300005564 Bacteria 2766
53 Ga0068857_100001639 3300005577 Bacteria 17952
54 Ga0068854_100006634 3300005578 Bacteria 7373
55 Ga0070702_100063591 3300005615 Bacteria 2155
56 Ga0068859_100007992 3300005617 Bacteria 10724
57 Ga0068859_100084227 3300005617 Bacteria 3224
58 Ga0068864_100056737 3300005618 Bacteria 3383
59 Ga0068864_100140767 3300005618 Bacteria 2176
60 Ga0068861_100008294 3300005719 Bacteria 7146
61 Ga0068861_100052096 3300005719 Bacteria 3110
62 Ga0068870_10001336 3300005840 Bacteria 9942
63 Ga0068863_100003678 3300005841 Bacteria 15148
64 Ga0068863_100017725 3300005841 Bacteria 6816
65 Ga0068863_100074771 3300005841 Bacteria 3205
66 Ga0068858_100108822 3300005842 Bacteria 2587
67 Ga0068862_100018798 3300005844 Bacteria 5758
68 Ga0081455_10012467 3300005937 Bacteria 8481
69 Ga0097621_100021042 3300006237 Bacteria 5037
70 Ga0075428_100040002 3300006844 Bacteria 5160
71 Ga0075428_100137384 3300006844 Bacteria 2657
72 Ga0075430_100008604 3300006846 Bacteria 8613
73 Ga0075430_100009874 3300006846 Bacteria 8072
74 Ga0075430_100073484 3300006846 Bacteria 2867
75 Ga0075430_100085121 3300006846 Bacteria 2647
76 Ga0075431_100025565 3300006847 Bacteria 6053
77 Ga0075431_100087514 3300006847 Bacteria 3214
78 Ga0075433_10045341 3300006852 Bacteria 3822
79 Ga0075434_100063658 3300006871 Bacteria 3671
80 Ga0075429_100040867 3300006880 Bacteria 4037
81 Ga0075429_100057362 3300006880 Bacteria 3390
82 Ga0075429_100198485 3300006880 Bacteria 1758
83 Ga0068865_100005125 3300006881 Bacteria 7931
84 Ga0097620_100007992 3300006931 Bacteria 10724
85 Ga0097620_100084227 3300006931 Bacteria 3224
86 Ga0075435_100004218 3300007076 Bacteria 9869
87 Ga0111539_10041819 3300009094 Bacteria 5507
88 Ga0111539_10058289 3300009094 Bacteria 4582
89 Ga0111539_10077918 3300009094 Bacteria 3900
90 Ga0111539_10085296 3300009094 Bacteria 3712
91 Ga0111539_10175664 3300009094 Bacteria 2502
92 Ga0111539_10177336 3300009094 Bacteria 2489
93 Ga0105247_10007781 3300009101 Bacteria 6556
94 Ga0105247_10007918 3300009101 Bacteria 6498
95 Ga0114129_10084391 3300009147 Bacteria 4410
96 Ga0114129_10243971 3300009147 Bacteria 2414
97 Ga0105243_10000039 3300009148 Bacteria 166207
98 Ga0105242_10000013 3300009176 Bacteria 133981
99 Ga0105242_10074442 3300009176 Bacteria 2825
100 Ga0105248_10075280 3300009177 Bacteria 3794
101 Ga0105248_10155291 3300009177 Bacteria 2582
102 Ga0105249_10002326 3300009553 Bacteria 16493
103 Ga0105249_10284195 3300009553 Bacteria 1653
104 Ga0105239_10164879 3300010375 Bacteria 2477
105 Ga0105246_10031368 3300011119 Bacteria 3517
106 Ga0157378_10031628 3300013297 Bacteria 4674
107 Ga0163162_10203100 3300013306 Bacteria 2111
108 Ga0157372_10315510 3300013307 Bacteria 1820
109 Ga0157375_10070478 3300013308 Bacteria 3506
110 Ga0163163_10008051 3300014325 Bacteria 9338
111 Ga0157380_10053259 3300014326 Bacteria 3207
112 Ga0182008_10058078 3300014497 Bacteria 1910
113 Ga0157379_10018336 3300014968 Bacteria 6169
114 Ga0206356_11190518 3300020070 Bacteria 1968
115 Ga0213876_10009841 3300021384 Bacteria 5144
116 Ga0207697_10002432 3300025315 Bacteria 9651
117 Ga0207653_10000027 3300025885 Bacteria 113830
118 Ga0207710_10003926 3300025900 Bacteria 6563
119 Ga0207688_10000513 3300025901 Bacteria 18721
120 Ga0207645_10000142 3300025907 Bacteria 55713
121 Ga0207645_10077298 3300025907 Bacteria 2132
122 Ga0207643_10000143 3300025908 Bacteria 48474
123 Ga0207643_10005451 3300025908 Bacteria 6803
124 Ga0207707_10052409 3300025912 Bacteria 3553
125 Ga0207660_10015983 3300025917 Bacteria 4961
126 Ga0207657_10054666 3300025919 Bacteria 3451
127 Ga0207657_10083902 3300025919 Bacteria 2672
128 Ga0207649_10017389 3300025920 Bacteria 4074
129 Ga0207649_10048900 3300025920 Bacteria 2609
130 Ga0207646_10038084 3300025922 Unclassified 4333
131 Ga0207681_10002630 3300025923 Bacteria 11389
132 Ga0207681_10040383 3300025923 Bacteria 3104
133 Ga0207659_10052763 3300025926 Bacteria 2898
134 Ga0207659_10067750 3300025926 Bacteria 2594
135 Ga0207644_10037603 3300025931 Unclassified 3406
136 Ga0207644_10104472 3300025931 Bacteria 2133
137 Ga0207706_10000408 3300025933 Bacteria 46179
138 Ga0207686_10000006 3300025934 Bacteria 259583
139 Ga0207709_10000037 3300025935 Bacteria 279771
140 Ga0207670_10025403 3300025936 Bacteria 3718
141 Ga0207704_10040150 3300025938 Bacteria 2732
142 Ga0207691_10017754 3300025940 Bacteria 6746
143 Ga0207691_10036198 3300025940 Bacteria 4573
144 Ga0207691_10078674 3300025940 Bacteria 2968
145 Ga0207711_10067005 3300025941 Bacteria 3107
146 Ga0207711_10118150 3300025941 Bacteria 2365
147 Ga0207689_10000302 3300025942 Bacteria 45130
148 Ga0207661_10003329 3300025944 Bacteria 11150
149 Ga0207679_10004123 3300025945 Bacteria 9024
150 Ga0207679_10006213 3300025945 Bacteria 7543
151 Ga0207667_10011305 3300025949 Bacteria 10380
152 Ga0207667_10101143 3300025949 Bacteria 2973
153 Ga0207712_10055954 3300025961 Bacteria 2778
154 Ga0207668_10014834 3300025972 Bacteria 4830
155 Ga0207640_10010381 3300025981 Bacteria 5246
156 Ga0207677_10023992 3300026023 Bacteria 3779
157 Ga0207703_10104054 3300026035 Bacteria 2411
158 Ga0207639_10001969 3300026041 Bacteria 13812
159 Ga0207639_10142348 3300026041 Bacteria 1999
160 Ga0207639_10222041 3300026041 Bacteria 1632
161 Ga0207678_10000295 3300026067 Bacteria 45080
162 Ga0207678_10049681 3300026067 Bacteria 3625
163 Ga0207708_10011245 3300026075 Bacteria 6662
164 Ga0207708_10031361 3300026075 Unclassified 4034
165 Ga0207702_10006480 3300026078 Bacteria 10094
166 Ga0207641_10018200 3300026088 Bacteria 5759
167 Ga0207648_10063644 3300026089 Bacteria 3215
168 Ga0207674_10000409 3300026116 Bacteria 55809
169 Ga0207674_10048128 3300026116 Bacteria 4365
170 Ga0207674_10102290 3300026116 Bacteria 2845
171 Ga0207675_100000465 3300026118 Bacteria 39473
172 Ga0207675_100075621 3300026118 Bacteria 3153
173 Ga0207683_10001801 3300026121 Bacteria 18977
174 Ga0207428_10009041 3300027907 Bacteria 8965
175 Ga0268265_10001811 3300028380 Bacteria 17090
176 Ga0268264_10004087 3300028381 Bacteria 12490
177 Ga0265331_10027033 3300031250 Bacteria 2880
178 Ga0307408_100027410 3300031548 Bacteria 3925
179 Ga0307508_10040294 3300031616 Bacteria 4194
180 Ga0307406_10019865 3300031901 Bacteria 3947
181 Ga0307409_100149632 3300031995 Bacteria 2025
182 Ga0400483_099525 3300039062 Bacteria 2311
183 Ga0436365_1925714 3300039437 Bacteria 8469
184 Ga0451791_1007077 3300041451 Bacteria 3102
185 Ga0451802_1142846 3300041460 Bacteria 2916
186 Ga0451853_2959995 3300041512 Bacteria 3627
187 Ga0466959_0013056 3300045049 Bacteria 6016
188 Ga0451576_0070373 3300045051 Bacteria 3642
189 Ga0451576_0074644 3300045051 Bacteria 3529
190 Ga0495582_0094261 3300046473 Bacteria 1671
191 Ga0495625_0026608 3300046660 Bacteria 4369
192 Ga0495686_0044924 3300047472 Bacteria 2796
193 Ga0496102_0027122 3300048905 Bacteria 5115
194 Ga0496104_0002471 3300048907 Bacteria 15927
195 Ga0496105_0015455 3300048908 Bacteria 6084
196 Ga0496106_0008996 3300048909 Bacteria 7381
197 Ga0496110_0002779 3300048913 Bacteria 13206
198 Ga0501031_0012875 3300049568 Bacteria 5464
199 Ga0501032_0001094 3300049569 Bacteria 21636
200 Ga0501034_0001173 3300049571 Bacteria 36311
201 Ga0501034_0007088 3300049571 Bacteria 11958
202 Ga0501037_0009439 3300049573 Bacteria 7161
203 Ga0501037_0050800 3300049573 Bacteria 3034
204 Ga0501038_0048866 3300049574 Bacteria 3660
205 Ga0501040_0045803 3300049576 Bacteria 2985
206 Ga0501042_0143268 3300049578 Bacteria 1723
207 Ga0501047_0051335 3300049581 Bacteria 3984
208 Ga0501047_0073230 3300049581 Bacteria 3298
209 Ga0501048_0000360 3300049582 Bacteria 31473
210 Ga0501067_0027790 3300049583 Bacteria 3135
211 Ga0501068_0024122 3300049584 Bacteria 3570
212 Ga0501069_0001408 3300049585 Bacteria 11791
213 Ga0501069_0053035 3300049585 Bacteria 2259
214 Ga0501070_0004101 3300049586 Bacteria 12528
215 Ga0501071_0071346 3300049587 Bacteria 2532
216 Ga0501073_0004670 3300049589 Bacteria 10294
217 Ga0501074_0004411 3300049590 Bacteria 10062
218 Ga0501077_0060747 3300049593 Bacteria 2398
219 Ga0501080_0003933 3300049742 Bacteria 13152
220 Ga0501080_0031915 3300049742 Bacteria 4909
221 Ga0501081_0164096 3300049743 Bacteria 1602
222 Ga0501035_0006935 3300049822 Bacteria 10582
223 Ga0501035_0007775 3300049822 Bacteria 10016
224 Ga0501035_0007914 3300049822 Bacteria 9925
225 Ga0501035_0157271 3300049822 Bacteria 1969
226 Ga0501044_0014158 3300049823 Bacteria 8612
227 Ga0501044_0068152 3300049823 Bacteria 3625
228 Ga0501045_0080271 3300049824 Bacteria 2405
229 nmdc:mga05p37_272598_c1 3300050507 Bacteria 2021
230 nmdc:mga05p37_305457_c1 3300050507 Bacteria 1888
231 nmdc:mga09592_75409_c1 3300050508 Unclassified 2867
232 nmdc:mga0qj67_2453_c1 3300050509 Bacteria 13203
233 nmdc:mga0qj67_70712_c1 3300050509 Bacteria 2784
234 nmdc:mga0qj67_75564_c1 3300050509 Bacteria 2693
235 nmdc:mga06r32_20618_c1 3300050510 Bacteria 6071
236 nmdc:mga08y16_132848_c1 3300050511 Bacteria 2587
237 nmdc:mga08y16_143049_c1 3300050511 Bacteria 2486
238 nmdc:mga08y16_18934_c1 3300050511 Bacteria 7250
239 nmdc:mga08y16_238612_c1 3300050511 Unclassified 1880
240 nmdc:mga0n895_64406_c1 3300050512 Bacteria 3626
241 nmdc:mga0a205_32021_c1 3300050515 Bacteria 5040
242 nmdc:mga0a205_43715_c1 3300050515 Bacteria 4318
243 Ga0500556_0021630 3300053104 Bacteria 2077
244 Ga0500568_0000201 3300053139 Bacteria 52464
245 Ga0500577_0002612 3300053142 Bacteria 4615
246 Ga0500616_0003339 3300053153 Bacteria 12357
247 Ga0500620_000059 3300053155 Bacteria 20299
248 Ga0500620_018805 3300053155 Bacteria 2018
249 Ga0500645_002699 3300053730 Bacteria 7710
250 Ga0590074_000183 3300059423 Bacteria 7884
251 Ga0590075_000033 3300059424 Bacteria 36144
252 Ga0590077_000107 3300059426 Bacteria 21978
253 Ga0501082_0129621 3300060353 Bacteria 2188
254 2503204507 2503198000 Bacteria 6884444
255 2509398846 2509276022 Bacteria 6200534
256 2644000976 2643221598 Bacteria 4578346
257 2644087790 2643221614 Bacteria 4260023
258 2688601163 2687453392 Bacteria 6880454
259 2903448631 2903448605 Bacteria 7357801
260 2924765056 2924762789 Bacteria 6561353
261 2937824388 2937822353 Bacteria 7290551
262 2958095492 2958092219 Bacteria 6861151
263 2968087489 2968083720 Bacteria 7351627
264 2987667962 2987666974 Bacteria 6509233
265 2996338870 2996336353 Bacteria 5511628
266 3000140727 3000135777 Bacteria 6891109
267 3004217555 3004211236 Bacteria 7417683
268 3004219902 3004218560 Bacteria 7421728
269 649875653 649633066 Bacteria 6690028
270 Ga0075428_100090950
271 rootL2_10066020
272 Ga0065707_10099560
273 Ga0070683_100016029
274 Ga0070683_100035599
275 Ga0070670_100001170
276 Ga0070680_100031674
277 Ga0070682_100001811
278 Ga0068868_100032077
279 Ga0070689_100100515
280 Ga0070689_100135698
281 Ga0070661_100008165
282 Ga0070692_10005210
283 Ga0070668_100012408
284 Ga0070669_100004000
285 Ga0070669_100129996
286 Ga0070675_100029324
287 Ga0070675_100052537
288 Ga0070671_100014072
289 Ga0070671_100030755
290 Ga0070671_100079264
291 Ga0070674_100095279
292 Ga0070673_100098603
293 Ga0070688_100004453
294 Ga0070688_100025398
295 Ga0070659_100023514
296 Ga0070667_100000196
297 Ga0070667_100052370
298 Ga0070703_10000121
299 Ga0070701_10042054
300 Ga0070694_100001664
301 Ga0070694_100017393
302 Ga0070663_100024990
303 Ga0070678_100012843
304 Ga0070681_10001337
305 Ga0070681_10003363
306 Ga0068867_100014978
307 Ga0070707_100045559
308 Ga0070698_100016506
309 Ga0070699_100094070
310 Ga0070679_100210280
311 Ga0070684_100032495
312 Ga0068853_100009844
313 Ga0068853_100030273
314 Ga0068853_100087407
315 Ga0070672_100022597
316 Ga0070693_100001573
317 Ga0070665_100025046
318 Ga0068855_100002783
319 Ga0068855_100101182
320 Ga0070664_100009125
321 Ga0070664_100082863
322 Ga0068857_100001639
323 Ga0068854_100006634
324 Ga0070702_100063591
325 Ga0068859_100007992
326 Ga0068859_100084227
327 Ga0068864_100056737
328 Ga0068864_100140767
329 Ga0068861_100008294
330 Ga0068861_100052096
331 Ga0068870_10001336
332 Ga0068863_100003678
333 Ga0068863_100017725
334 Ga0068863_100074771
335 Ga0068858_100108822
336 Ga0068862_100018798
337 Ga0081455_10012467
338 Ga0097621_100021042
339 Ga0075428_100040002
340 Ga0075428_100137384
341 Ga0075430_100008604
342 Ga0075430_100009874
343 Ga0075430_100073484
344 Ga0075430_100085121
345 Ga0075431_100025565
346 Ga0075431_100087514
347 Ga0075433_10045341
348 Ga0075434_100063658
349 Ga0075429_100040867
350 Ga0075429_100057362
351 Ga0075429_100198485
352 Ga0068865_100005125
353 Ga0097620_100007992
354 Ga0097620_100084227
355 Ga0075435_100004218
356 Ga0111539_10041819
357 Ga0111539_10058289
358 Ga0111539_10077918
359 Ga0111539_10085296
360 Ga0111539_10175664
361 Ga0111539_10177336
362 Ga0105247_10007781
363 Ga0105247_10007918
364 Ga0114129_10084391
365 Ga0114129_10243971
366 Ga0105243_10000039
367 Ga0105242_10000013
368 Ga0105242_10074442
369 Ga0105248_10075280
370 Ga0105248_10155291
371 Ga0105249_10002326
372 Ga0105249_10284195
373 Ga0105239_10164879
374 Ga0105246_10031368
375 Ga0157378_10031628
376 Ga0163162_10203100
377 Ga0157372_10315510
378 Ga0157375_10070478
379 Ga0163163_10008051
380 Ga0157380_10053259
381 Ga0182008_10058078
382 Ga0157379_10018336
383 Ga0206356_11190518
384 Ga0213876_10009841
385 Ga0207697_10002432
386 Ga0207653_10000027
387 Ga0207710_10003926
388 Ga0207688_10000513
389 Ga0207645_10000142
390 Ga0207645_10077298
391 Ga0207643_10000143
392 Ga0207643_10005451
393 Ga0207707_10052409
394 Ga0207660_10015983
395 Ga0207657_10054666
396 Ga0207657_10083902
397 Ga0207649_10017389
398 Ga0207649_10048900
399 Ga0207646_10038084
400 Ga0207681_10002630
401 Ga0207681_10040383
402 Ga0207659_10052763
403 Ga0207659_10067750
404 Ga0207644_10037603
405 Ga0207644_10104472
406 Ga0207706_10000408
407 Ga0207686_10000006
408 Ga0207709_10000037
409 Ga0207670_10025403
410 Ga0207704_10040150
411 Ga0207691_10017754
412 Ga0207691_10036198
413 Ga0207691_10078674
414 Ga0207711_10067005
415 Ga0207711_10118150
416 Ga0207689_10000302
417 Ga0207661_10003329
418 Ga0207679_10004123
419 Ga0207679_10006213
420 Ga0207667_10011305
421 Ga0207667_10101143
422 Ga0207712_10055954
423 Ga0207668_10014834
424 Ga0207640_10010381
425 Ga0207677_10023992
426 Ga0207703_10104054
427 Ga0207639_10001969
428 Ga0207639_10142348
429 Ga0207639_10222041
430 Ga0207678_10000295
431 Ga0207678_10049681
432 Ga0207708_10011245
433 Ga0207708_10031361
434 Ga0207702_10006480
435 Ga0207641_10018200
436 Ga0207648_10063644
437 Ga0207674_10000409
438 Ga0207674_10048128
439 Ga0207674_10102290
440 Ga0207675_100000465
441 Ga0207675_100075621
442 Ga0207683_10001801
443 Ga0207428_10009041
444 Ga0268265_10001811
445 Ga0268264_10004087
446 Ga0265331_10027033
447 Ga0307408_100027410
448 Ga0307508_10040294
449 Ga0307406_10019865
450 Ga0307409_100149632
451 Ga0400483_099525
452 Ga0436365_1925714
453 Ga0451791_1007077
454 Ga0451802_1142846
455 Ga0451853_2959995
456 Ga0466959_0013056
457 Ga0451576_0070373
458 Ga0451576_0074644
459 Ga0495582_0094261
460 Ga0495625_0026608
461 Ga0495686_0044924
462 Ga0496102_0027122
463 Ga0496104_0002471
464 Ga0496105_0015455
465 Ga0496106_0008996
466 Ga0496110_0002779
467 Ga0501031_0012875
468 Ga0501032_0001094
469 Ga0501034_0001173
470 Ga0501034_0007088
471 Ga0501037_0009439
472 Ga0501037_0050800
473 Ga0501038_0048866
474 Ga0501040_0045803
475 Ga0501042_0143268
476 Ga0501047_0051335
477 Ga0501047_0073230
478 Ga0501048_0000360
479 Ga0501067_0027790
480 Ga0501068_0024122
481 Ga0501069_0001408
482 Ga0501069_0053035
483 Ga0501070_0004101
484 Ga0501071_0071346
485 Ga0501073_0004670
486 Ga0501074_0004411
487 Ga0501077_0060747
488 Ga0501080_0003933
489 Ga0501080_0031915
490 Ga0501081_0164096
491 Ga0501035_0006935
492 Ga0501035_0007775
493 Ga0501035_0007914
494 Ga0501035_0157271
495 Ga0501044_0014158
496 Ga0501044_0068152
497 Ga0501045_0080271
498 nmdc:mga05p37_272598_c1
499 nmdc:mga05p37_305457_c1
500 nmdc:mga09592_75409_c1
501 nmdc:mga0qj67_2453_c1
502 nmdc:mga0qj67_70712_c1
503 nmdc:mga0qj67_75564_c1
504 nmdc:mga06r32_20618_c1
505 nmdc:mga08y16_132848_c1
506 nmdc:mga08y16_143049_c1
507 nmdc:mga08y16_18934_c1
508 nmdc:mga08y16_238612_c1
509 nmdc:mga0n895_64406_c1
510 nmdc:mga0a205_32021_c1
511 nmdc:mga0a205_43715_c1
512 Ga0500556_0021630
513 Ga0500568_0000201
514 Ga0500577_0002612
515 Ga0500616_0003339
516 Ga0500620_000059
517 Ga0500620_018805
518 Ga0500645_002699
519 Ga0590074_000183
520 Ga0590075_000033
521 Ga0590077_000107
522 Ga0501082_0129621
523 2503204507
524 2509398846
525 2644000976
526 2644087790
527 2688601163
528 2903448631
529 2924765056
530 2937824388
531 2958095492
532 2968087489
533 2987667962
534 2996338870
535 3000140727
536 3004217555
537 3004219902
538 649875653

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

24

87

0.98

PF00155

Aminotran_1_2

Aminotransferase class I and II

152

487

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pq9-assembly7.cif.gz_KKK crystal structure of bacillus clausii pdxr at 2.8 angstroms resolution 0.9555 16 86
5kvr-assembly1.cif.gz_A-2 x-ray crystal structure of a fragment (1-75) of a transcriptional regulator pdhr from escherichia coli cft073 0.9501 18 82
5t4j-assembly1.cif.gz_B plp and gaba trigger gabr-mediated transcription regulation in bacillus subsidies via external aldimine formation 0.9432 133 495
5t4j-assembly1.cif.gz_B plp and gaba trigger gabr-mediated transcription regulation in bacillus subsidies via external aldimine formation 0.9381 133 495
5d4r-assembly1.cif.gz_A crystal structure of arar(dbd) in complex with operator ore1 0.9355 17 83
ID Description Score Start End Superfamily
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9863 40 82 1.10.10.10
3by6E01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9759 18 83 1.10.10.10
3by6D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9732 18 83 1.10.10.10
af_P9WMG5_6_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9715 18 83 1.10.10.10
3by6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9713 18 83 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0A0D1V4-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9835 187 497 GO:0009058
GO:0030170
AF-A0A250JS82-F1-model_v4 GntR family transcriptional regulator 0.9781 228 499 GO:0009058
GO:0030170
AF-A0A0A0D1V4-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9772 187 497 GO:0009058
GO:0030170
AF-A0A3B9EDW9-F1-model_v4 GntR family transcriptional regulator 0.9764 240 492 GO:0009058
GO:0030170
AF-A0A5J4KVE2-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9757 247 416 GO:0009058
GO:0030170

Map