F376062

General Info

Members Datasets Scaffolds Average Seq Length
269 161 269 468

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100000290|Ga0070697_10000029021
Length 507
Sequence MSHLTTETFDANARAALGDVQLRGALRNATSLFGTRRLAAANGLQNWQELRTEARAIKDLVLLNLDRYLAEFVSNAESCGAQVHWARDAEEANQIVCRLANEHNALKIVKSKSMVTEEIHLNVELERHGLEVIETDLGEYIIQLAGEAPSHIIVPAIHKTKRQIAELFTEKLGIEPTDDVDRLTSVARGVLRQRFAAADIGISGVNFGVAETGTILILENEGNVRLTTSLPKVHIAVMGIEKILPRFADLDVFLKLLPRSGTGQQLTTYQSIITGTKRKQSDEGPEELHIVLLDNGRSRMLAHPVTRQSLACIRCGACLNACPVYQQIGGHAYGSVYPGPIGAVITPQLIGLGKAAQLPYASKIDIPELLLHLRAEITEGQKAEGSRQKAVGREPGLEVAREGRDQDEAVARSGIKKHKMEGVAFKLFALMMGSPGLYEWNGKAGRLFQRLVMRDGRIGKVGATFSRLAPPLGAWTRARDMRPIAQRSFRELWRDGLAEDRQRDQPH

Samples

Sample ID Description Type Environment
1 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
32 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
44 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
60 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
77 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
119 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
120 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
121 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
122 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
123 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
124 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
125 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
126 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
127 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
128 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
129 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
134 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
135 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
136 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
137 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
138 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
141 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
142 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
143 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
150 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
151 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
152 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
153 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
160 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
161 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.74
Nodule 0
Rhizoplane 0.37
Rhizosphere 96.28
Stem 0
Stem Tuber 0
Unclassified 2.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNAas_1000043 3300000532 Bacteria 8512
2 JGI24748J21848_1000012 3300002074 Bacteria 152599
3 JGI24034J26672_10000003 3300002239 Bacteria 501747
4 Ga0065712_10000689 3300005290 Bacteria 10534
5 Ga0065715_10002938 3300005293 Bacteria 5155
6 Ga0065707_10088402 3300005295 Bacteria 4668
7 Ga0065707_10093849 3300005295 Bacteria 3572
8 Ga0070683_100000052 3300005329 Bacteria 90261
9 Ga0070690_100057380 3300005330 Bacteria 2499
10 Ga0070670_100011486 3300005331 Bacteria 7577
11 Ga0070670_100012923 3300005331 Bacteria 7148
12 Ga0070666_10038448 3300005335 Unclassified 3184
13 Ga0070680_100028755 3300005336 Unclassified 4460
14 Ga0068868_100195109 3300005338 Bacteria 1685
15 Ga0070660_100082713 3300005339 Bacteria 2521
16 Ga0070668_100003412 3300005347 Bacteria 11730
17 Ga0070669_100029022 3300005353 Bacteria 3986
18 Ga0070669_100160927 3300005353 Bacteria 1744
19 Ga0070671_100147718 3300005355 Unclassified 1985
20 Ga0070673_100027521 3300005364 Bacteria 4216
21 Ga0070673_100081256 3300005364 Bacteria 2628
22 Ga0070659_100002068 3300005366 Bacteria 14319
23 Ga0070659_100091158 3300005366 Archaea 2443
24 Ga0070667_100116148 3300005367 Bacteria 2324
25 Ga0070703_10000142 3300005406 Bacteria 37070
26 Ga0070701_10003357 3300005438 Bacteria 6323
27 Ga0070705_100049315 3300005440 Bacteria 2444
28 Ga0070700_100000027 3300005441 Bacteria 123461
29 Ga0070700_100093371 3300005441 Bacteria 1968
30 Ga0070694_100001899 3300005444 Bacteria 12389
31 Ga0070694_100007283 3300005444 Bacteria 6739
32 Ga0070681_10000290 3300005458 Bacteria 40569
33 Ga0070681_10002169 3300005458 Bacteria 17858
34 Ga0068867_100055346 3300005459 Bacteria 2933
35 Ga0070706_100006305 3300005467 Bacteria 11209
36 Ga0070706_100059719 3300005467 Unclassified 3520
37 Ga0070706_100148063 3300005467 Unclassified 2192
38 Ga0070707_100004141 3300005468 Bacteria 13596
39 Ga0070707_100034895 3300005468 Bacteria 4796
40 Ga0070707_100194421 3300005468 Bacteria 1978
41 Ga0070698_100001987 3300005471 Bacteria 22694
42 Ga0070698_100008881 3300005471 Bacteria 10804
43 Ga0070698_100021418 3300005471 Bacteria 6771
44 Ga0070698_100044403 3300005471 Bacteria 4551
45 Ga0070699_100003708 3300005518 Bacteria 13505
46 Ga0070699_100052665 3300005518 Bacteria 3521
47 Ga0070699_100147675 3300005518 Bacteria 2078
48 Ga0070697_100000174 3300005536 Bacteria 52444
49 Ga0070697_100000290 3300005536 Bacteria 40181
50 Ga0070697_100070790 3300005536 Unclassified 2860
51 Ga0068853_100000705 3300005539 Bacteria 23104
52 Ga0068853_100035781 3300005539 Bacteria 4219
53 Ga0070696_100093761 3300005546 Bacteria 2141
54 Ga0068855_100026672 3300005563 Bacteria 6913
55 Ga0070664_100001293 3300005564 Bacteria 20029
56 Ga0070664_100011106 3300005564 Bacteria 7302
57 Ga0068857_100004188 3300005577 Bacteria 12143
58 Ga0068857_100022350 3300005577 Bacteria 5564
59 Ga0068854_100013289 3300005578 Bacteria 5398
60 Ga0070702_100013270 3300005615 Unclassified 4156
61 Ga0068859_100005394 3300005617 Bacteria 13002
62 Ga0068859_100041246 3300005617 Bacteria 4636
63 Ga0068859_100096488 3300005617 Bacteria 3009
64 Ga0068864_100005239 3300005618 Bacteria 10628
65 Ga0068864_100014159 3300005618 Bacteria 6620
66 Ga0068864_100094028 3300005618 Bacteria 2649
67 Ga0068864_100178292 3300005618 Bacteria 1941
68 Ga0068861_100055330 3300005719 Bacteria 3025
69 Ga0068861_100163655 3300005719 Unclassified 1837
70 Ga0068863_100063636 3300005841 Bacteria 3489
71 Ga0068858_100000277 3300005842 Bacteria 55193
72 Ga0068858_100127921 3300005842 Unclassified 2380
73 Ga0068858_100138962 3300005842 Bacteria 2280
74 Ga0068860_100082061 3300005843 Bacteria 3066
75 Ga0068860_100086072 3300005843 Unclassified 2990
76 Ga0068862_100052470 3300005844 Bacteria 3489
77 Ga0068862_100156209 3300005844 Unclassified 2034
78 Ga0068862_100216522 3300005844 Unclassified 1732
79 Ga0070717_10110041 3300006028 Unclassified 2349
80 Ga0070712_100009526 3300006175 Bacteria 6125
81 Ga0097621_100024721 3300006237 Bacteria 4694
82 Ga0097621_100078637 3300006237 Unclassified 2740
83 Ga0097621_100116735 3300006237 Bacteria 2260
84 Ga0097621_100170774 3300006237 Bacteria 1874
85 Ga0068871_100029319 3300006358 Bacteria 4320
86 Ga0075428_100000595 3300006844 Bacteria 36911
87 Ga0075434_100132075 3300006871 Bacteria 2516
88 Ga0075436_100002682 3300006914 Bacteria 12246
89 Ga0097620_100005394 3300006931 Bacteria 13002
90 Ga0097620_100041247 3300006931 Bacteria 4636
91 Ga0097620_100096487 3300006931 Bacteria 3009
92 Ga0075435_100002535 3300007076 Bacteria 12162
93 Ga0099794_10001881 3300007265 Bacteria 7533
94 Ga0105240_10069189 3300009093 Bacteria 4370
95 Ga0111539_10000914 3300009094 Bacteria 38577
96 Ga0111539_10110963 3300009094 Bacteria 3218
97 Ga0105247_10000003 3300009101 Bacteria 694517
98 Ga0105247_10000617 3300009101 Bacteria 28607
99 Ga0105247_10074459 3300009101 Bacteria 2130
100 Ga0105243_10000051 3300009148 Bacteria 139849
101 Ga0105243_10096230 3300009148 Bacteria 2449
102 Ga0105241_10019337 3300009174 Bacteria 5022
103 Ga0105242_10000379 3300009176 Bacteria 35359
104 Ga0105242_10004024 3300009176 Bacteria 11425
105 Ga0105242_10022390 3300009176 Bacteria 4968
106 Ga0105242_10030711 3300009176 Bacteria 4291
107 Ga0105248_10019715 3300009177 Bacteria 7467
108 Ga0105248_10066532 3300009177 Bacteria 4046
109 Ga0105248_10080654 3300009177 Bacteria 3658
110 Ga0105248_10103768 3300009177 Unclassified 3205
111 Ga0105237_10007526 3300009545 Bacteria 11906
112 Ga0105238_10004959 3300009551 Bacteria 13162
113 Ga0105238_10027772 3300009551 Bacteria 5767
114 Ga0105238_10116152 3300009551 Archaea 2655
115 Ga0105249_10000113 3300009553 Bacteria 108613
116 Ga0105249_10017322 3300009553 Bacteria 6397
117 Ga0105239_10057248 3300010375 Bacteria 4276
118 Ga0105239_10166741 3300010375 Unclassified 2463
119 Ga0157373_10002373 3300013100 Bacteria 14303
120 Ga0157373_10023558 3300013100 Unclassified 4462
121 Ga0157369_10020515 3300013105 Bacteria 7388
122 Ga0157369_10045952 3300013105 Bacteria 4747
123 Ga0157378_10002134 3300013297 Bacteria 17569
124 Ga0157378_10036022 3300013297 Bacteria 4379
125 Ga0157378_10056192 3300013297 Bacteria 3507
126 Ga0163162_10000023 3300013306 Bacteria 193395
127 Ga0163162_10002798 3300013306 Bacteria 16586
128 Ga0163162_10013662 3300013306 Bacteria 7934
129 Ga0163162_10101565 3300013306 Bacteria 2968
130 Ga0157372_10014161 3300013307 Bacteria 8520
131 Ga0157372_10100314 3300013307 Unclassified 3304
132 Ga0157375_10040600 3300013308 Unclassified 4487
133 Ga0157375_10041569 3300013308 Bacteria 4440
134 Ga0157375_10168514 3300013308 Bacteria 2336
135 Ga0163163_10029263 3300014325 Bacteria 5298
136 Ga0157380_10007024 3300014326 Bacteria 7968
137 Ga0157376_10009507 3300014969 Bacteria 7064
138 Ga0157376_10077446 3300014969 Bacteria 2844
139 Ga0213876_10000078 3300021384 Bacteria 110940
140 Ga0213876_10000741 3300021384 Bacteria 22598
141 Ga0213875_10000205 3300021388 Bacteria 60682
142 Ga0209233_1001512 3300025261 Bacteria 9127
143 Ga0207697_10012944 3300025315 Unclassified 3486
144 Ga0207653_10000247 3300025885 Bacteria 35017
145 Ga0207710_10000001 3300025900 Bacteria 1797433
146 Ga0207685_10000017 3300025905 Bacteria 146902
147 Ga0207645_10061705 3300025907 Bacteria 2395
148 Ga0207643_10037755 3300025908 Bacteria 2711
149 Ga0207684_10005954 3300025910 Bacteria 11165
150 Ga0207684_10019110 3300025910 Bacteria 5861
151 Ga0207684_10040362 3300025910 Unclassified 3957
152 Ga0207684_10083321 3300025910 Bacteria 2724
153 Ga0207684_10112595 3300025910 Bacteria 2329
154 Ga0207684_10171924 3300025910 Bacteria 1868
155 Ga0207660_10025549 3300025917 Bacteria 4010
156 Ga0207662_10031015 3300025918 Unclassified 3105
157 Ga0207657_10016898 3300025919 Bacteria 7021
158 Ga0207649_10093843 3300025920 Unclassified 1970
159 Ga0207652_10023955 3300025921 Bacteria 5063
160 Ga0207646_10004110 3300025922 Bacteria 16022
161 Ga0207646_10007766 3300025922 Bacteria 10854
162 Ga0207646_10029842 3300025922 Bacteria 4950
163 Ga0207659_10029794 3300025926 Bacteria 3723
164 Ga0207644_10002534 3300025931 Bacteria 11751
165 Ga0207644_10021161 3300025931 Bacteria 4428
166 Ga0207686_10000022 3300025934 Bacteria 174346
167 Ga0207686_10000762 3300025934 Bacteria 19805
168 Ga0207686_10090438 3300025934 Bacteria 2019
169 Ga0207709_10000056 3300025935 Bacteria 221962
170 Ga0207709_10019422 3300025935 Bacteria 3821
171 Ga0207669_10006021 3300025937 Bacteria 5501
172 Ga0207665_10000012 3300025939 Bacteria 143062
173 Ga0207691_10074855 3300025940 Bacteria 3054
174 Ga0207711_10005157 3300025941 Bacteria 11069
175 Ga0207711_10014457 3300025941 Bacteria 6558
176 Ga0207711_10086170 3300025941 Bacteria 2753
177 Ga0207711_10165092 3300025941 Bacteria 2006
178 Ga0207689_10004034 3300025942 Bacteria 13342
179 Ga0207689_10081511 3300025942 Unclassified 2659
180 Ga0207689_10161006 3300025942 Unclassified 1849
181 Ga0207679_10030135 3300025945 Bacteria 3785
182 Ga0207651_10024215 3300025960 Bacteria 3750
183 Ga0207712_10000216 3300025961 Bacteria 57333
184 Ga0207712_10024588 3300025961 Bacteria 3991
185 Ga0207712_10105424 3300025961 Bacteria 2104
186 Ga0207668_10001293 3300025972 Bacteria 14876
187 Ga0207640_10029828 3300025981 Unclassified 3353
188 Ga0207658_10060632 3300025986 Bacteria 2824
189 Ga0207658_10105037 3300025986 Unclassified 2221
190 Ga0207703_10000080 3300026035 Bacteria 111786
191 Ga0207639_10005123 3300026041 Bacteria 8832
192 Ga0207708_10000055 3300026075 Bacteria 103534
193 Ga0207708_10188038 3300026075 Bacteria 1642
194 Ga0207641_10051913 3300026088 Bacteria 3472
195 Ga0207641_10183635 3300026088 Unclassified 1917
196 Ga0207648_10020424 3300026089 Bacteria 5964
197 Ga0207648_10032279 3300026089 Bacteria 4623
198 Ga0207676_10109042 3300026095 Bacteria 2312
199 Ga0207676_10187845 3300026095 Unclassified 1815
200 Ga0207674_10002475 3300026116 Bacteria 23302
201 Ga0207675_100003364 3300026118 Bacteria 15627
202 Ga0207675_100005381 3300026118 Bacteria 12281
203 Ga0207675_100075352 3300026118 Bacteria 3158
204 Ga0207428_10071471 3300027907 Unclassified 2725
205 Ga0207428_10139287 3300027907 Bacteria 1853
206 Ga0268265_10058579 3300028380 Bacteria 2942
207 Ga0268265_10071457 3300028380 Bacteria 2703
208 Ga0268264_10023677 3300028381 Bacteria 5007
209 Ga0268264_10038936 3300028381 Bacteria 3926
210 Ga0265323_10008948 3300028653 Bacteria 4112
211 Ga0265316_10034294 3300031344 Bacteria 4124
212 Ga0307405_10046689 3300031731 Unclassified 2663
213 Ga0307406_10010785 3300031901 Bacteria 5165
214 Ga0307407_10068000 3300031903 Bacteria 2108
215 Ga0307409_100036814 3300031995 Bacteria 3601
216 Ga0307409_100043107 3300031995 Bacteria 3385
217 Ga0307416_100190091 3300032002 Bacteria 1935
218 Ga0307414_10007034 3300032004 Bacteria 6307
219 Ga0307411_10047370 3300032005 Bacteria 2779
220 Ga0307415_100037588 3300032126 Bacteria 3183
221 Ga0307415_100041374 3300032126 Bacteria 3060
222 Ga0373927_0002121 3300035695 Bacteria 14614
223 Ga0436364_0056243 3300037853 Bacteria 52545
224 Ga0395901_0156579 3300038443 Bacteria 2393
225 Ga0395901_0178362 3300038443 Unclassified 2228
226 Ga0395901_0218848 3300038443 Unclassified 1991
227 Ga0436365_0012618 3300039437 Bacteria 53643
228 Ga0436365_1660809 3300039437 Bacteria 51972
229 Ga0451576_0013760 3300045051 Bacteria 9038
230 Ga0451576_0274170 3300045051 Bacteria 1764
231 Ga0495580_0000993 3300046472 Bacteria 24927
232 Ga0495667_0053563 3300046559 Bacteria 2657
233 Ga0495623_0022759 3300046679 Bacteria 4046
234 Ga0495684_0030692 3300047471 Bacteria 4127
235 Ga0495684_0143491 3300047471 Bacteria 1790
236 Ga0495686_0000406 3300047472 Bacteria 68207
237 Ga0495686_0005074 3300047472 Bacteria 10543
238 Ga0495686_0016390 3300047472 Bacteria 5026
239 Ga0495686_0042183 3300047472 Bacteria 2903
240 Ga0495686_0070183 3300047472 Bacteria 2159
241 Ga0495686_0080882 3300047472 Bacteria 1985
242 Ga0495602_0013286 3300048088 Bacteria 8422
243 Ga0496104_0000039 3300048907 Bacteria 177103
244 Ga0496126_0000029 3300048929 Bacteria 389370
245 Ga0501296_001001 3300049519 Bacteria 2814
246 Ga0501298_000794 3300049521 Bacteria 4440
247 Ga0501033_0065214 3300049570 Bacteria 2679
248 Ga0501034_0106658 3300049571 Bacteria 2794
249 Ga0501037_0027405 3300049573 Bacteria 4209
250 Ga0501040_0084592 3300049576 Bacteria 2201
251 Ga0501042_0098614 3300049578 Bacteria 2101
252 Ga0501046_0051175 3300049580 Bacteria 3260
253 Ga0501207_006424 3300049654 Bacteria 1651
254 Ga0501223_004694 3300049663 Bacteria 2905
255 Ga0501221_001390 3300049704 Bacteria 3986
256 Ga0501225_0001037 3300049705 Bacteria 8725
257 Ga0501225_0008113 3300049705 Bacteria 3021
258 Ga0501045_0027387 3300049824 Bacteria 4107
259 Ga0501226_000545 3300049853 Bacteria 5183
260 nmdc:mga05p37_5771_c1 3300050507 Bacteria 14561
261 nmdc:mga06r32_150500_c1 3300050510 Bacteria 2305
262 nmdc:mga08y16_640_c1 3300050511 Bacteria 32830
263 nmdc:mga08y16_82815_c1 3300050511 Bacteria 3345
264 nmdc:mga0n895_191540_c1 3300050512 Bacteria 2076
265 nmdc:mga0rr50_555_c1 3300050513 Bacteria 20080
266 nmdc:mga08x19_16_c1 3300050514 Bacteria 348119
267 nmdc:mga08x19_2858_c1 3300050514 Bacteria 10405
268 nmdc:mga08x19_28768_c1 3300050514 Unclassified 3483
269 Ga0500616_0000554 3300053153 Bacteria 46158

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300025920 Ga0207649_10093843 Ga0207649_100938431 381
2 3300009551 Ga0105238_10027772 Ga0105238_100277726 408
3 3300046472 Ga0495580_0000993 Ga0495580_0000993_6897_8315 409
4 3300046559 Ga0495667_0053563 Ga0495667_0053563_910_2328 409
5 3300046679 Ga0495623_0022759 Ga0495623_0022759_453_1871 409
6 3300047471 Ga0495684_0030692 Ga0495684_0030692_2020_3438 409
7 3300048088 Ga0495602_0013286 Ga0495602_0013286_244_1662 409
8 3300009093 Ga0105240_10069189 Ga0105240_100691892 415
9 3300009551 Ga0105238_10116152 Ga0105238_101161522 415
10 3300035695 Ga0373927_0002121 Ga0373927_0002121_1062_2417 420
11 3300045051 Ga0451576_0274170 Ga0451576_0274170_30_1391 421
12 3300005468 Ga0070707_100004141 Ga0070707_1000041415 429
13 3300025922 Ga0207646_10007766 Ga0207646_100077665 429
14 3300049573 Ga0501037_0027405 Ga0501037_0027405_883_2379 430
15 3300049570 Ga0501033_0065214 Ga0501033_0065214_483_1979 431
16 3300049571 Ga0501034_0106658 Ga0501034_0106658_188_1684 431
17 3300049580 Ga0501046_0051175 Ga0501046_0051175_982_2478 431
18 3300006844 Ga0075428_100000595 Ga0075428_1000005957 432
19 3300047472 Ga0495686_0042183 Ga0495686_0042183_962_2437 432
20 3300009148 Ga0105243_10000051 Ga0105243_1000005124 434
21 3300009176 Ga0105242_10000379 Ga0105242_1000037917 434
22 3300025934 Ga0207686_10000022 Ga0207686_1000002278 434
23 3300025935 Ga0207709_10000056 Ga0207709_1000005679 434
24 3300025910 Ga0207684_10112595 Ga0207684_101125951 435
25 3300031731 Ga0307405_10046689 Ga0307405_100466892 435
26 3300032126 Ga0307415_100041374 Ga0307415_1000413742 435
27 3300005347 Ga0070668_100003412 Ga0070668_1000034125 436
28 3300009553 Ga0105249_10000113 Ga0105249_1000011382 436
29 3300013306 Ga0163162_10000023 Ga0163162_1000002351 436
30 3300025961 Ga0207712_10000216 Ga0207712_100002161 436
31 3300025972 Ga0207668_10001293 Ga0207668_100012936 436
32 3300005458 Ga0070681_10000290 Ga0070681_1000029025 437
33 3300006175 Ga0070712_100009526 Ga0070712_1000095264 437
34 3300021388 Ga0213875_10000205 Ga0213875_1000020522 437
35 3300037853 Ga0436364_0056243 Ga0436364_0056243_46348_47778 437
36 3300009094 Ga0111539_10000914 Ga0111539_100009145 438
37 3300009177 Ga0105248_10019715 Ga0105248_100197157 438
38 3300025941 Ga0207711_10014457 Ga0207711_100144577 438
39 3300027907 Ga0207428_10139287 Ga0207428_101392872 438
40 3300049519 Ga0501296_001001 Ga0501296_001001_210_1592 438
41 3300049521 Ga0501298_000794 Ga0501298_000794_237_1619 438
42 3300049705 Ga0501225_0008113 Ga0501225_0008113_720_2102 438
43 3300050511 nmdc:mga08y16_640_c1 nmdc:mga08y16_640_c1_2435_3859 438
44 3300025261 Ga0209233_1001512 Ga0209233_10015123 439
45 3300047472 Ga0495686_0000406 Ga0495686_0000406_23249_24718 439
46 3300047472 Ga0495686_0005074 Ga0495686_0005074_199_1683 439
47 3300047472 Ga0495686_0016390 Ga0495686_0016390_1210_2691 439
48 3300047472 Ga0495686_0070183 Ga0495686_0070183_445_1908 439
49 3300047472 Ga0495686_0080882 Ga0495686_0080882_190_1650 439
50 3300048907 Ga0496104_0000039 Ga0496104_0000039_28191_29654 439
51 3300048929 Ga0496126_0000029 Ga0496126_0000029_318800_320284 439
52 3300005329 Ga0070683_100000052 Ga0070683_10000005252 440
53 3300005366 Ga0070659_100091158 Ga0070659_1000911582 440
54 3300005441 Ga0070700_100000027 Ga0070700_10000002784 440
55 3300005546 Ga0070696_100093761 Ga0070696_1000937611 440
56 3300005617 Ga0068859_100005394 Ga0068859_1000053946 440
57 3300006028 Ga0070717_10110041 Ga0070717_101100412 440
58 3300006914 Ga0075436_100002682 Ga0075436_1000026824 440
59 3300006931 Ga0097620_100005394 Ga0097620_1000053946 440
60 3300007076 Ga0075435_100002535 Ga0075435_1000025354 440
61 3300009177 Ga0105248_10080654 Ga0105248_100806543 440
62 3300014326 Ga0157380_10007024 Ga0157380_100070245 440
63 3300021384 Ga0213876_10000078 Ga0213876_1000007840 440
64 3300026075 Ga0207708_10000055 Ga0207708_1000005523 440
65 3300028653 Ga0265323_10008948 Ga0265323_100089484 440
66 3300031344 Ga0265316_10034294 Ga0265316_100342942 440
67 3300039437 Ga0436365_0012618 Ga0436365_0012618_45869_47344 440
68 3300050513 nmdc:mga0rr50_555_c1 nmdc:mga0rr50_555_c1_7750_9252 440
69 3300050514 nmdc:mga08x19_16_c1 nmdc:mga08x19_16_c1_217956_219458 440
70 3300050514 nmdc:mga08x19_2858_c1 nmdc:mga08x19_2858_c1_1858_3273 440
71 3300005336 Ga0070680_100028755 Ga0070680_1000287553 441
72 3300005578 Ga0068854_100013289 Ga0068854_1000132895 441
73 3300025921 Ga0207652_10023955 Ga0207652_100239553 441
74 3300025942 Ga0207689_10081511 Ga0207689_100815111 441
75 3300045051 Ga0451576_0013760 Ga0451576_0013760_5405_6883 441
76 3300050510 nmdc:mga06r32_150500_c1 nmdc:mga06r32_150500_c1_244_1605 441
77 3300050514 nmdc:mga08x19_28768_c1 nmdc:mga08x19_28768_c1_879_2252 441
78 3300005353 Ga0070669_100160927 Ga0070669_1001609271 442
79 3300031903 Ga0307407_10068000 Ga0307407_100680002 442
80 3300031995 Ga0307409_100036814 Ga0307409_1000368143 442
81 3300032004 Ga0307414_10007034 Ga0307414_100070342 442
82 3300032126 Ga0307415_100037588 Ga0307415_1000375882 442
83 3300038443 Ga0395901_0178362 Ga0395901_0178362_182_1552 442
84 3300049654 Ga0501207_006424 Ga0501207_006424_219_1586 442
85 3300049663 Ga0501223_004694 Ga0501223_004694_1295_2662 442
86 3300049704 Ga0501221_001390 Ga0501221_001390_76_1443 442
87 3300049705 Ga0501225_0001037 Ga0501225_0001037_738_2105 442
88 3300049853 Ga0501226_000545 Ga0501226_000545_2869_4236 442
89 3300053153 Ga0500616_0000554 Ga0500616_0000554_27567_29060 442
90 3300002074 JGI24748J21848_1000012 JGI24748J21848_100001249 443
91 3300002239 JGI24034J26672_10000003 JGI24034J26672_10000003344 443
92 3300005331 Ga0070670_100011486 Ga0070670_1000114865 443
93 3300005331 Ga0070670_100012923 Ga0070670_1000129233 443
94 3300005440 Ga0070705_100049315 Ga0070705_1000493152 443
95 3300005467 Ga0070706_100006305 Ga0070706_1000063058 443
96 3300005468 Ga0070707_100034895 Ga0070707_1000348954 443
97 3300005471 Ga0070698_100008881 Ga0070698_1000088814 443
98 3300005518 Ga0070699_100003708 Ga0070699_1000037086 443
99 3300005539 Ga0068853_100000705 Ga0068853_1000007059 443
100 3300005539 Ga0068853_100035781 Ga0068853_1000357813 443
101 3300005563 Ga0068855_100026672 Ga0068855_1000266723 443
102 3300005564 Ga0070664_100001293 Ga0070664_10000129311 443
103 3300005577 Ga0068857_100022350 Ga0068857_1000223503 443
104 3300005617 Ga0068859_100096488 Ga0068859_1000964883 443
105 3300005618 Ga0068864_100178292 Ga0068864_1001782922 443
106 3300005842 Ga0068858_100000277 Ga0068858_10000027735 443
107 3300005844 Ga0068862_100052470 Ga0068862_1000524702 443
108 3300006871 Ga0075434_100132075 Ga0075434_1001320753 443
109 3300006931 Ga0097620_100096487 Ga0097620_1000964873 443
110 3300009101 Ga0105247_10000003 Ga0105247_10000003339 443
111 3300009148 Ga0105243_10096230 Ga0105243_100962302 443
112 3300009176 Ga0105242_10004024 Ga0105242_100040243 443
113 3300013100 Ga0157373_10002373 Ga0157373_100023735 443
114 3300013105 Ga0157369_10020515 Ga0157369_100205155 443
115 3300013306 Ga0163162_10013662 Ga0163162_100136626 443
116 3300013307 Ga0157372_10014161 Ga0157372_100141613 443
117 3300025900 Ga0207710_10000001 Ga0207710_10000001970 443
118 3300025919 Ga0207657_10016898 Ga0207657_100168983 443
119 3300025922 Ga0207646_10029842 Ga0207646_100298422 443
120 3300025934 Ga0207686_10000762 Ga0207686_1000076210 443
121 3300025935 Ga0207709_10019422 Ga0207709_100194222 443
122 3300025939 Ga0207665_10000012 Ga0207665_1000001238 443
123 3300025945 Ga0207679_10030135 Ga0207679_100301353 443
124 3300026035 Ga0207703_10000080 Ga0207703_1000008053 443
125 3300026041 Ga0207639_10005123 Ga0207639_100051237 443
126 3300026118 Ga0207675_100005381 Ga0207675_1000053817 443
127 3300028380 Ga0268265_10071457 Ga0268265_100714572 443
128 3300032002 Ga0307416_100190091 Ga0307416_1001900912 443
129 3300038443 Ga0395901_0156579 Ga0395901_0156579_765_2135 443
130 3300050512 nmdc:mga0n895_191540_c1 nmdc:mga0n895_191540_c1_390_1757 443
131 3300000532 CNAas_1000043 CNAas_10000438 444
132 3300005290 Ga0065712_10000689 Ga0065712_100006899 444
133 3300005293 Ga0065715_10002938 Ga0065715_100029382 444
134 3300005295 Ga0065707_10088402 Ga0065707_100884022 444
135 3300005295 Ga0065707_10093849 Ga0065707_100938493 444
136 3300005330 Ga0070690_100057380 Ga0070690_1000573801 444
137 3300005335 Ga0070666_10038448 Ga0070666_100384483 444
138 3300005338 Ga0068868_100195109 Ga0068868_1001951091 444
139 3300005339 Ga0070660_100082713 Ga0070660_1000827132 444
140 3300005353 Ga0070669_100029022 Ga0070669_1000290222 444
141 3300005355 Ga0070671_100147718 Ga0070671_1001477182 444
142 3300005364 Ga0070673_100027521 Ga0070673_1000275213 444
143 3300005364 Ga0070673_100081256 Ga0070673_1000812562 444
144 3300005366 Ga0070659_100002068 Ga0070659_1000020685 444
145 3300005367 Ga0070667_100116148 Ga0070667_1001161482 444
146 3300005406 Ga0070703_10000142 Ga0070703_1000014210 444
147 3300005438 Ga0070701_10003357 Ga0070701_100033574 444
148 3300005441 Ga0070700_100093371 Ga0070700_1000933712 444
149 3300005444 Ga0070694_100001899 Ga0070694_1000018993 444
150 3300005444 Ga0070694_100007283 Ga0070694_1000072833 444
151 3300005458 Ga0070681_10002169 Ga0070681_100021699 444
152 3300005459 Ga0068867_100055346 Ga0068867_1000553461 444
153 3300005467 Ga0070706_100059719 Ga0070706_1000597193 444
154 3300005467 Ga0070706_100148063 Ga0070706_1001480632 444
155 3300005468 Ga0070707_100194421 Ga0070707_1001944212 444
156 3300005471 Ga0070698_100001987 Ga0070698_10000198712 444
157 3300005471 Ga0070698_100021418 Ga0070698_1000214185 444
158 3300005471 Ga0070698_100044403 Ga0070698_1000444033 444
159 3300005518 Ga0070699_100052665 Ga0070699_1000526653 444
160 3300005518 Ga0070699_100147675 Ga0070699_1001476752 444
161 3300005536 Ga0070697_100000174 Ga0070697_10000017423 444
162 3300005536 Ga0070697_100000290 Ga0070697_10000029021 444
163 3300005536 Ga0070697_100070790 Ga0070697_1000707903 444
164 3300005564 Ga0070664_100011106 Ga0070664_1000111067 444
165 3300005577 Ga0068857_100004188 Ga0068857_1000041889 444
166 3300005615 Ga0070702_100013270 Ga0070702_1000132702 444
167 3300005617 Ga0068859_100041246 Ga0068859_1000412463 444
168 3300005618 Ga0068864_100005239 Ga0068864_1000052397 444
169 3300005618 Ga0068864_100014159 Ga0068864_1000141593 444
170 3300005618 Ga0068864_100094028 Ga0068864_1000940282 444
171 3300005719 Ga0068861_100055330 Ga0068861_1000553302 444
172 3300005719 Ga0068861_100163655 Ga0068861_1001636552 444
173 3300005841 Ga0068863_100063636 Ga0068863_1000636363 444
174 3300005842 Ga0068858_100127921 Ga0068858_1001279212 444
175 3300005842 Ga0068858_100138962 Ga0068858_1001389622 444
176 3300005843 Ga0068860_100082061 Ga0068860_1000820613 444
177 3300005843 Ga0068860_100086072 Ga0068860_1000860722 444
178 3300005844 Ga0068862_100156209 Ga0068862_1001562091 444
179 3300005844 Ga0068862_100216522 Ga0068862_1002165222 444
180 3300006237 Ga0097621_100024721 Ga0097621_1000247213 444
181 3300006237 Ga0097621_100078637 Ga0097621_1000786372 444
182 3300006237 Ga0097621_100116735 Ga0097621_1001167352 444
183 3300006237 Ga0097621_100170774 Ga0097621_1001707741 444
184 3300006358 Ga0068871_100029319 Ga0068871_1000293193 444
185 3300006931 Ga0097620_100041247 Ga0097620_1000412473 444
186 3300007265 Ga0099794_10001881 Ga0099794_100018813 444
187 3300009094 Ga0111539_10110963 Ga0111539_101109632 444
188 3300009101 Ga0105247_10000617 Ga0105247_1000061715 444
189 3300009101 Ga0105247_10074459 Ga0105247_100744592 444
190 3300009174 Ga0105241_10019337 Ga0105241_100193374 444
191 3300009176 Ga0105242_10022390 Ga0105242_100223905 444
192 3300009176 Ga0105242_10030711 Ga0105242_100307112 444
193 3300009177 Ga0105248_10066532 Ga0105248_100665324 444
194 3300009177 Ga0105248_10103768 Ga0105248_101037681 444
195 3300009545 Ga0105237_10007526 Ga0105237_100075265 444
196 3300009551 Ga0105238_10004959 Ga0105238_100049599 444
197 3300009553 Ga0105249_10017322 Ga0105249_100173222 444
198 3300010375 Ga0105239_10057248 Ga0105239_100572484 444
199 3300010375 Ga0105239_10166741 Ga0105239_101667412 444
200 3300013100 Ga0157373_10023558 Ga0157373_100235582 444
201 3300013105 Ga0157369_10045952 Ga0157369_100459524 444
202 3300013297 Ga0157378_10002134 Ga0157378_100021344 444
203 3300013297 Ga0157378_10036022 Ga0157378_100360223 444
204 3300013297 Ga0157378_10056192 Ga0157378_100561923 444
205 3300013306 Ga0163162_10002798 Ga0163162_100027982 444
206 3300013306 Ga0163162_10101565 Ga0163162_101015653 444
207 3300013307 Ga0157372_10100314 Ga0157372_101003143 444
208 3300013308 Ga0157375_10040600 Ga0157375_100406004 444
209 3300013308 Ga0157375_10041569 Ga0157375_100415691 444
210 3300013308 Ga0157375_10168514 Ga0157375_101685142 444
211 3300014325 Ga0163163_10029263 Ga0163163_100292633 444
212 3300014969 Ga0157376_10009507 Ga0157376_100095074 444
213 3300014969 Ga0157376_10077446 Ga0157376_100774462 444
214 3300021384 Ga0213876_10000741 Ga0213876_1000074111 444
215 3300025315 Ga0207697_10012944 Ga0207697_100129443 444
216 3300025885 Ga0207653_10000247 Ga0207653_1000024710 444
217 3300025905 Ga0207685_10000017 Ga0207685_1000001791 444
218 3300025907 Ga0207645_10061705 Ga0207645_100617053 444
219 3300025908 Ga0207643_10037755 Ga0207643_100377552 444
220 3300025910 Ga0207684_10005954 Ga0207684_100059547 444
221 3300025910 Ga0207684_10019110 Ga0207684_100191104 444
222 3300025910 Ga0207684_10040362 Ga0207684_100403624 444
223 3300025910 Ga0207684_10083321 Ga0207684_100833212 444
224 3300025910 Ga0207684_10171924 Ga0207684_101719241 444
225 3300025917 Ga0207660_10025549 Ga0207660_100255493 444
226 3300025918 Ga0207662_10031015 Ga0207662_100310152 444
227 3300025922 Ga0207646_10004110 Ga0207646_1000411010 444
228 3300025926 Ga0207659_10029794 Ga0207659_100297943 444
229 3300025931 Ga0207644_10002534 Ga0207644_100025346 444
230 3300025931 Ga0207644_10021161 Ga0207644_100211613 444
231 3300025934 Ga0207686_10090438 Ga0207686_100904382 444
232 3300025937 Ga0207669_10006021 Ga0207669_100060214 444
233 3300025940 Ga0207691_10074855 Ga0207691_100748552 444
234 3300025941 Ga0207711_10005157 Ga0207711_100051576 444
235 3300025941 Ga0207711_10086170 Ga0207711_100861703 444
236 3300025941 Ga0207711_10165092 Ga0207711_101650922 444
237 3300025942 Ga0207689_10004034 Ga0207689_100040347 444
238 3300025942 Ga0207689_10161006 Ga0207689_101610061 444
239 3300025960 Ga0207651_10024215 Ga0207651_100242152 444
240 3300025961 Ga0207712_10024588 Ga0207712_100245883 444
241 3300025961 Ga0207712_10105424 Ga0207712_101054241 444
242 3300025981 Ga0207640_10029828 Ga0207640_100298282 444
243 3300025986 Ga0207658_10060632 Ga0207658_100606322 444
244 3300025986 Ga0207658_10105037 Ga0207658_101050371 444
245 3300026075 Ga0207708_10188038 Ga0207708_101880381 444
246 3300026088 Ga0207641_10051913 Ga0207641_100519133 444
247 3300026088 Ga0207641_10183635 Ga0207641_101836351 444
248 3300026089 Ga0207648_10020424 Ga0207648_100204245 444
249 3300026089 Ga0207648_10032279 Ga0207648_100322793 444
250 3300026095 Ga0207676_10109042 Ga0207676_101090422 444
251 3300026095 Ga0207676_10187845 Ga0207676_101878452 444
252 3300026116 Ga0207674_10002475 Ga0207674_100024759 444
253 3300026118 Ga0207675_100003364 Ga0207675_1000033646 444
254 3300026118 Ga0207675_100075352 Ga0207675_1000753522 444
255 3300027907 Ga0207428_10071471 Ga0207428_100714711 444
256 3300028380 Ga0268265_10058579 Ga0268265_100585793 444
257 3300028381 Ga0268264_10023677 Ga0268264_100236772 444
258 3300028381 Ga0268264_10038936 Ga0268264_100389363 444
259 3300031901 Ga0307406_10010785 Ga0307406_100107854 444
260 3300031995 Ga0307409_100043107 Ga0307409_1000431073 444
261 3300032005 Ga0307411_10047370 Ga0307411_100473702 444
262 3300038443 Ga0395901_0218848 Ga0395901_0218848_335_1807 444
263 3300039437 Ga0436365_1660809 Ga0436365_1660809_42940_44406 444
264 3300047471 Ga0495684_0143491 Ga0495684_0143491_141_1613 444
265 3300049576 Ga0501040_0084592 Ga0501040_0084592_440_1936 444
266 3300049578 Ga0501042_0098614 Ga0501042_0098614_520_2016 444
267 3300049824 Ga0501045_0027387 Ga0501045_0027387_1765_3261 444
268 3300050507 nmdc:mga05p37_5771_c1 nmdc:mga05p37_5771_c1_11041_12519 444
269 3300050511 nmdc:mga08y16_82815_c1 nmdc:mga08y16_82815_c1_201_1670 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02589

LUD_dom

LUD domain

69

293

0.99

PF11870

LutB_C

Lactate utilisation protein B, C-terminal

398

496

0.92

PF13183

Fer4_8

4Fe-4S dicluster domain

308

359

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
2g40-assembly1.cif.gz_A-2 crystal structure of a duf162 family protein (dr_1909) from deinococcus radiodurans at 1.70 a resolution 0.7602 66 293
2g40-assembly1.cif.gz_A-2 crystal structure of a duf162 family protein (dr_1909) from deinococcus radiodurans at 1.70 a resolution 0.7361 66 293
6bxn-assembly1.cif.gz_A crystal structure of candidatus methanoperedens nitroreducens dph2 with 4fe-4s cluster and sam 0.7325 93 134
5y4a-assembly1.cif.gz_B cadmium directed assembly of adenine phosphoribosyltransferase from yersinia pseudotuberculosis. 0.7314 89 134
6bxn-assembly1.cif.gz_B crystal structure of candidatus methanoperedens nitroreducens dph2 with 4fe-4s cluster and sam 0.7291 93 134
ID Description Score Start End Superfamily
af_P77433_40_228_3.40.50.10420 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.7898 66 293 3.40.50.10420
af_P77433_40_228_3.40.50.10420 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.7704 66 293 3.40.50.10420
af_Q9BQC3_35_128_3.40.50.11840 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Diphthamide synthesis DPH1/DPH2 domain 1 0.7692 94 134 3.40.50.11840
2g40A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NagB/RpiA/CoA transferase-like 0.7602 66 293 3.40.50.10420
3lzcA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Diphthamide synthesis DPH1/DPH2 domain 1 0.7451 93 134 3.40.50.11840
ID Description Score Start End GO Terms
AF-A0A838EB51-F1-model_v4 Lactate utilization protein 0.962 48 221 GO:0006089
GO:0051539
AF-A0A7Y1ZI72-F1-model_v4 Lactate utilization protein 0.9533 34 294 GO:0006089
GO:0051539
AF-A0A2V7HIW7-F1-model_v4 Amino acid dehydrogenase 0.945 80 236 GO:0006089
GO:0051539
AF-A0A831RQS0-F1-model_v4 Lactate utilization protein 0.9435 33 269 GO:0006089
GO:0051539
AF-A0A3C1GFU7-F1-model_v4 LUD domain-containing protein 0.9404 29 297 GO:0006089
GO:0051539

Feature Viewer

pLDDT pTM Quality
66.91 0.62 Medium
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Predicted Structure (AlphaFold2)

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