F376002

General Info

Members Datasets Scaffolds Average Seq Length
269 193 263 314

Family's Representative Sequence

Representative Sequence 3300005353|Ga0070669_100098525|Ga0070669_1000985251
Length 349
Sequence MAAFRDRATAVRDEWHVWTLDLNIKISLYANMSKPTETFRALADPTRLRILTLLRSMELSVGELAQVLGQSQPRVSRHIRILIDAGLATRRREGSWVFLSPAEPKRIEPLFATLDSWADLDGADPWTVADMARLAAVRADRAAAAERYFERHATHWDELRSLHVGESEVEAAIVRALGERPLGRLLDIGTGTGRMIELLSGQAERTTGIDRSPEMLRVARAKIDGSGIPAELRQGDMYALPLDTNSADTIVIHQVLHYAQQPPAAIAEAARVLAPAGRLLIVDFAPHDREELRDRNAHARLGFADDAVINWMAAAGLRGRVAEHLEGDELTVTLWIGEQSKEKRLKVVA

Samples

Sample ID Description Type Environment
1 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
2 2830075706 Sphingomonas jinjuensis DSM 21457 Isolate Rhizosphere
3 2928027323 Sphingomonas sp. 1185 Isolate Unclassified
4 2984555340 Sphingomonas sp. SORGH_AS789 Isolate Aerial Root
5 2984564862 Sphingomonas sp. SORGH_AS870 Isolate Aerial Root
6 2993356040 Sphingomonas sp. SORGH_AS742 Isolate Aerial Root
7 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
8 3300001976 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7 Metagenome Rhizosphere
9 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
10 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
11 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
12 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
13 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
14 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
15 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
16 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
17 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
18 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
19 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
20 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
21 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
22 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
23 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
24 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
32 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
35 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
36 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
51 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
52 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
53 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
56 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
57 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
61 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
65 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
66 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
67 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
70 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
71 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
80 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
81 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
83 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
116 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
120 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
121 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
122 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
123 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
130 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
133 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
134 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
137 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
142 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
145 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
148 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
151 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
152 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
153 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
154 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
155 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
159 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
160 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
161 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
162 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
163 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
164 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
165 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
166 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
167 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
168 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
169 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
170 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
171 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
172 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
173 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
176 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
177 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
178 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
179 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
180 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
181 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
182 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
183 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
184 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
185 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
186 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
187 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
190 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
191 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
192 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
193 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.03
Metatranscriptomes 0.74
Isolates 2.23

Biome Distribution

Category Percentage (%)
Aerial Root 1.12
Bulb 0
Endosphere 8.92
Nodule 0
Rhizoplane 4.09
Rhizosphere 81.78
Stem 0
Stem Tuber 0
Unclassified 4.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1000195 3300001904 Bacteria 10851
2 JGI24752J21851_1002134 3300001976 Bacteria 2640
3 JGI24740J21852_10001256 3300001979 Bacteria 11472
4 JGI24740J21852_10003291 3300001979 Bacteria 7123
5 JGI24740J21852_10004528 3300001979 Bacteria 5980
6 JGI24739J22299_10012434 3300001989 Bacteria 3126
7 JGI24739J22299_10031389 3300001989 Bacteria 1836
8 JGI24737J22298_10003444 3300001990 Bacteria 5591
9 JGI24743J22301_10008600 3300001991 Bacteria 1794
10 JGI24735J21928_10005461 3300002067 Bacteria 4216
11 JGI24735J21928_10013604 3300002067 Bacteria 2554
12 JGI24750J21931_1000221 3300002070 Bacteria 9723
13 JGI24748J21848_1000042 3300002074 Bacteria 62376
14 JGI24748J21848_1000062 3300002074 Bacteria 40740
15 JGI24738J21930_10005019 3300002075 Bacteria 3200
16 JGI24034J26672_10000035 3300002239 Bacteria 85548
17 JGI24742J22300_10007033 3300002244 Bacteria 1854
18 JGI25165J46597_1000095 3300003214 Bacteria 163883
19 Ga0065707_10081794 3300005295 Bacteria 40025
20 Ga0070658_10028143 3300005327 Bacteria 4511
21 Ga0070658_10032003 3300005327 Bacteria 4228
22 Ga0070658_10034288 3300005327 Bacteria 4084
23 Ga0070658_10144046 3300005327 Bacteria 1991
24 Ga0070658_10214469 3300005327 Bacteria 1627
25 Ga0070683_100004201 3300005329 Bacteria 11815
26 Ga0070690_100000009 3300005330 Bacteria 112447
27 Ga0070666_10000006 3300005335 Bacteria 319173
28 Ga0068868_100000191 3300005338 Bacteria 40696
29 Ga0070660_100020234 3300005339 Bacteria 4888
30 Ga0070689_100001313 3300005340 Bacteria 15803
31 Ga0070661_100050569 3300005344 Bacteria 3041
32 Ga0070668_100000034 3300005347 Bacteria 82494
33 Ga0070668_100011688 3300005347 Bacteria 6536
34 Ga0070668_100032834 3300005347 Bacteria 3950
35 Ga0070669_100000095 3300005353 Bacteria 86930
36 Ga0070669_100098525 3300005353 Bacteria 2202
37 Ga0070671_100000135 3300005355 Bacteria 47375
38 Ga0070671_100164777 3300005355 Bacteria 1874
39 Ga0070688_100008026 3300005365 Bacteria 5712
40 Ga0070659_100000029 3300005366 Bacteria 139518
41 Ga0070659_100046364 3300005366 Bacteria 3407
42 Ga0070667_100029744 3300005367 Bacteria 4554
43 Ga0070662_100013541 3300005457 Bacteria 5429
44 Ga0070662_100032436 3300005457 Bacteria 3671
45 Ga0070662_100058338 3300005457 Bacteria 2809
46 Ga0070685_10000391 3300005466 Bacteria 26284
47 Ga0070684_100305540 3300005535 Bacteria 1460
48 Ga0068853_100006030 3300005539 Bacteria 9587
49 Ga0068853_100022915 3300005539 Bacteria 5221
50 Ga0068853_100101308 3300005539 Bacteria 2547
51 Ga0068853_100278975 3300005539 Bacteria 1540
52 Ga0070686_100000022 3300005544 Bacteria 131168
53 Ga0070686_100001142 3300005544 Bacteria 15252
54 Ga0070665_100000019 3300005548 Bacteria 413972
55 Ga0070665_100000154 3300005548 Bacteria 125835
56 Ga0070665_100002093 3300005548 Bacteria 22376
57 Ga0070665_100004466 3300005548 Bacteria 14696
58 Ga0070665_100025575 3300005548 Bacteria 5947
59 Ga0070665_100083417 3300005548 Bacteria 3201
60 Ga0070664_100063714 3300005564 Bacteria 3143
61 Ga0068854_100038574 3300005578 Bacteria 3360
62 Ga0068856_100090409 3300005614 Bacteria 3045
63 Ga0068852_100005800 3300005616 Bacteria 8868
64 Ga0068859_100112374 3300005617 Bacteria 2787
65 Ga0068859_100194041 3300005617 Bacteria 2115
66 Ga0068864_100012850 3300005618 Bacteria 6926
67 Ga0068861_100006310 3300005719 Bacteria 8070
68 Ga0068851_10039001 3300005834 Bacteria 2385
69 Ga0068863_100000020 3300005841 Bacteria 198519
70 Ga0068863_100000048 3300005841 Bacteria 135912
71 Ga0068863_100048795 3300005841 Bacteria 4014
72 Ga0068858_100000665 3300005842 Bacteria 35973
73 Ga0068860_100000014 3300005843 Bacteria 319437
74 Ga0068862_100000613 3300005844 Bacteria 37071
75 Ga0068862_100009472 3300005844 Bacteria 8058
76 Ga0081455_10003862 3300005937 Bacteria 17077
77 Ga0081539_10007865 3300005985 Bacteria 9514
78 Ga0081539_10055567 3300005985 Bacteria 2202
79 Ga0075432_10000231 3300006058 Bacteria 14915
80 Ga0075370_10077210 3300006353 Bacteria 1911
81 Ga0075428_100059878 3300006844 Bacteria 4169
82 Ga0075434_100071868 3300006871 Bacteria 3452
83 Ga0097620_100112378 3300006931 Bacteria 2787
84 Ga0097620_100194049 3300006931 Bacteria 2115
85 Ga0105251_10109558 3300009011 Bacteria 1259
86 Ga0105240_10281269 3300009093 Bacteria 1911
87 Ga0105245_10013186 3300009098 Bacteria 7201
88 Ga0105245_10030191 3300009098 Bacteria 4792
89 Ga0105245_10068918 3300009098 Bacteria 3206
90 Ga0105247_10086493 3300009101 Bacteria 1984
91 Ga0105248_10026937 3300009177 Bacteria 6392
92 Ga0105248_10061465 3300009177 Bacteria 4218
93 Ga0105237_10018447 3300009545 Bacteria 7220
94 Ga0105238_10062348 3300009551 Bacteria 3729
95 Ga0105238_10311725 3300009551 Bacteria 1558
96 Ga0105238_10486750 3300009551 Bacteria 1233
97 Ga0105249_10000104 3300009553 Bacteria 118213
98 Ga0157373_10042435 3300013100 Bacteria 3251
99 Ga0157370_10011496 3300013104 Bacteria 9249
100 Ga0157369_10013611 3300013105 Bacteria 9201
101 Ga0157369_10038460 3300013105 Bacteria 5231
102 Ga0157369_10277190 3300013105 Bacteria 1747
103 Ga0157374_10389926 3300013296 Bacteria 1388
104 Ga0157378_10045946 3300013297 Bacteria 3882
105 Ga0157372_10202816 3300013307 Bacteria 2298
106 Ga0157372_10311186 3300013307 Bacteria 1833
107 Ga0163163_10013524 3300014325 Bacteria 7479
108 Ga0157380_10002492 3300014326 Bacteria 12415
109 Ga0157380_10003668 3300014326 Bacteria 10562
110 Ga0157379_10030059 3300014968 Bacteria 4832
111 Ga0183363_1002 3300015690 Bacteria 425040
112 Ga0163161_10000020 3300017792 Bacteria 214642
113 Ga0206356_11118989 3300020070 Bacteria 3043
114 Ga0206353_11529424 3300020082 Bacteria 4084
115 Ga0207672_1001948 3300025223 Bacteria 1357
116 Ga0209233_1000052 3300025261 Bacteria 445813
117 Ga0207656_10020581 3300025321 Bacteria 2624
118 Ga0207680_10000011 3300025903 Bacteria 391225
119 Ga0207647_10003070 3300025904 Bacteria 12553
120 Ga0207645_10013313 3300025907 Bacteria 5550
121 Ga0207705_10034035 3300025909 Bacteria 3642
122 Ga0207705_10255767 3300025909 Bacteria 1336
123 Ga0207654_10015796 3300025911 Bacteria 3924
124 Ga0207695_10008652 3300025913 Bacteria 12706
125 Ga0207695_10089977 3300025913 Bacteria 3085
126 Ga0207671_10007141 3300025914 Bacteria 9745
127 Ga0207671_10011627 3300025914 Bacteria 7143
128 Ga0207657_10008261 3300025919 Bacteria 10595
129 Ga0207657_10017713 3300025919 Bacteria 6822
130 Ga0207649_10052508 3300025920 Bacteria 2529
131 Ga0207681_10001112 3300025923 Bacteria 17445
132 Ga0207694_10005230 3300025924 Bacteria 10017
133 Ga0207694_10039652 3300025924 Bacteria 3625
134 Ga0207694_10054456 3300025924 Bacteria 3104
135 Ga0207687_10000913 3300025927 Bacteria 20112
136 Ga0207687_10168311 3300025927 Bacteria 1688
137 Ga0207644_10000162 3300025931 Bacteria 48507
138 Ga0207644_10018271 3300025931 Bacteria 4741
139 Ga0207690_10000004 3300025932 Bacteria 746138
140 Ga0207706_10009911 3300025933 Bacteria 8736
141 Ga0207706_10054805 3300025933 Bacteria 3518
142 Ga0207670_10000902 3300025936 Bacteria 15670
143 Ga0207711_10060769 3300025941 Bacteria 3257
144 Ga0207679_10102379 3300025945 Bacteria 2242
145 Ga0207679_10439652 3300025945 Bacteria 1155
146 Ga0207667_10005823 3300025949 Bacteria 15024
147 Ga0207712_10000013 3300025961 Bacteria 391208
148 Ga0207668_10000163 3300025972 Bacteria 46311
149 Ga0207668_10017061 3300025972 Bacteria 4542
150 Ga0207668_10043443 3300025972 Bacteria 3050
151 Ga0207640_10127763 3300025981 Bacteria 1832
152 Ga0207658_10001912 3300025986 Bacteria 15577
153 Ga0207677_10000080 3300026023 Bacteria 79544
154 Ga0207639_10063532 3300026041 Bacteria 2859
155 Ga0207639_10409284 3300026041 Bacteria 1224
156 Ga0207678_10008840 3300026067 Bacteria 8868
157 Ga0207702_10006296 3300026078 Bacteria 10254
158 Ga0207641_10000001 3300026088 Bacteria 1180841
159 Ga0207641_10000101 3300026088 Bacteria 122493
160 Ga0207641_10017507 3300026088 Bacteria 5867
161 Ga0207676_10002005 3300026095 Bacteria 14831
162 Ga0207674_10022103 3300026116 Bacteria 6837
163 Ga0207674_10042504 3300026116 Bacteria 4694
164 Ga0207675_100000640 3300026118 Bacteria 34358
165 Ga0207428_10161691 3300027907 Bacteria 1700
166 Ga0268266_10000025 3300028379 Bacteria 477143
167 Ga0268266_10000584 3300028379 Bacteria 50438
168 Ga0268266_10001436 3300028379 Bacteria 28384
169 Ga0268266_10014676 3300028379 Bacteria 6731
170 Ga0268266_10077831 3300028379 Bacteria 2884
171 Ga0268265_10000345 3300028380 Bacteria 50171
172 Ga0268265_10007326 3300028380 Bacteria 7448
173 Ga0268264_10000037 3300028381 Bacteria 391116
174 Ga0307408_100172675 3300031548 Bacteria 1727
175 Ga0307508_10002317 3300031616 Bacteria 20218
176 Ga0307412_10272267 3300031911 Bacteria 1325
177 Ga0307409_100405332 3300031995 Bacteria 1304
178 Ga0307510_10173649 3300033180 Bacteria 1730
179 Ga0373927_0039896 3300035695 Bacteria 3047
180 Ga0373947_0157372 3300035725 Bacteria 1467
181 Ga0395899_0059267 3300037312 Bacteria 2822
182 Ga0395899_0325876 3300037312 Bacteria 1033
183 Ga0395900_0021149 3300037418 Bacteria 6649
184 Ga0395900_0083826 3300037418 Bacteria 3275
185 Ga0395900_0095260 3300037418 Bacteria 3058
186 Ga0395898_0661139 3300037466 Bacteria 987
187 Ga0395905_0038825 3300037471 Bacteria 4466
188 Ga0395901_0398159 3300038443 Bacteria 1415
189 Ga0466968_0044437 3300044735 Bacteria 1882
190 Ga0451576_0000017 3300045051 Bacteria 558261
191 Ga0466958_0322797 3300045836 Bacteria 992
192 Ga0466967_0059514 3300045976 Bacteria 3382
193 Ga0495650_0083573 3300046471 Bacteria 1227
194 Ga0495585_0019319 3300046492 Bacteria 3930
195 Ga0495637_0043389 3300046520 Bacteria 1920
196 Ga0495643_0061406 3300046522 Bacteria 1993
197 Ga0495654_0002113 3300046530 Bacteria 12978
198 Ga0495668_0003098 3300046616 Bacteria 12851
199 Ga0495668_0022168 3300046616 Bacteria 3632
200 Ga0495668_0028583 3300046616 Bacteria 3153
201 Ga0495625_0000054 3300046660 Bacteria 187599
202 Ga0495625_0154924 3300046660 Bacteria 1538
203 Ga0495669_0030150 3300046684 Bacteria 2381
204 Ga0495686_0006990 3300047472 Bacteria 8525
205 Ga0495686_0009860 3300047472 Bacteria 6846
206 Ga0496100_0045587 3300048903 Bacteria 2815
207 Ga0496101_0050762 3300048904 Bacteria 2987
208 Ga0496102_0000049 3300048905 Bacteria 179480
209 Ga0496103_0000037 3300048906 Bacteria 179474
210 Ga0496106_0054079 3300048909 Bacteria 3033
211 Ga0496108_0236432 3300048911 Bacteria 1589
212 Ga0496110_0162168 3300048913 Bacteria 2027
213 Ga0496110_0657160 3300048913 Bacteria 948
214 Ga0496111_0177135 3300048914 Bacteria 1585
215 Ga0496114_0000033 3300048917 Bacteria 166897
216 Ga0496115_0236366 3300048918 Bacteria 1506
217 Ga0496117_0000115 3300048920 Bacteria 179488
218 Ga0496117_0010620 3300048920 Bacteria 8354
219 Ga0496118_0000086 3300048921 Bacteria 179488
220 Ga0496118_0003608 3300048921 Bacteria 19234
221 Ga0496121_0033616 3300048924 Bacteria 4636
222 Ga0496121_0069679 3300048924 Bacteria 2837
223 Ga0496124_0000102 3300048927 Bacteria 179488
224 Ga0496125_0066879 3300048928 Bacteria 2836
225 Ga0495678_052572 3300049459 Bacteria 1568
226 Ga0501290_000167 3300049513 Bacteria 10539
227 Ga0501292_000027 3300049515 Bacteria 41628
228 Ga0501294_000100 3300049517 Bacteria 9639
229 Ga0501300_000242 3300049523 Bacteria 8234
230 Ga0501202_010966 3300049652 Bacteria 1690
231 Ga0501222_002186 3300049662 Bacteria 2713
232 Ga0501223_004256 3300049663 Bacteria 3076
233 Ga0501227_014172 3300049665 Bacteria 1766
234 Ga0501259_001688 3300049688 Bacteria 3672
235 Ga0501261_000011 3300049690 Bacteria 48296
236 Ga0501279_000010 3300049775 Bacteria 103375
237 Ga0501280_000071 3300049776 Bacteria 27788
238 Ga0501282_000189 3300049778 Bacteria 7534
239 Ga0501044_0162469 3300049823 Bacteria 2209
240 nmdc:mga0qj67_12207_c1 3300050509 Bacteria 6465
241 nmdc:mga0n895_157945_c1 3300050512 Bacteria 2299
242 Ga0500643_000375 3300053087 Bacteria 34881
243 Ga0500643_006044 3300053087 Bacteria 5117
244 Ga0500651_0001548 3300053093 Bacteria 11663
245 Ga0500641_0006184 3300053096 Bacteria 4243
246 Ga0500641_0028333 3300053096 Bacteria 2187
247 Ga0500592_000434 3300053116 Bacteria 7004
248 Ga0500595_002284 3300053119 Bacteria 9638
249 Ga0500595_030912 3300053119 Bacteria 1800
250 Ga0500614_006469 3300053123 Bacteria 2465
251 Ga0500618_004544 3300053125 Bacteria 4394
252 Ga0500642_0000670 3300053130 Bacteria 10129
253 Ga0500655_000261 3300053133 Bacteria 12327
254 Ga0500559_0007293 3300053136 Bacteria 4910
255 Ga0500559_0065478 3300053136 Bacteria 1628
256 Ga0500568_0047569 3300053139 Bacteria 1699
257 Ga0500616_0016244 3300053153 Bacteria 4242
258 Ga0500622_0006686 3300053156 Bacteria 6645
259 Ga0500627_0000380 3300053158 Bacteria 12042
260 Ga0500636_0185874 3300053177 Bacteria 1111
261 Ga0500570_013169 3300053724 Bacteria 4626
262 Ga0500645_027871 3300053730 Bacteria 1712
263 Ga0501082_0370156 3300060353 Bacteria 1250

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035725 Ga0373947_0157372 Ga0373947_0157372_392_1183 262
2 3300025945 Ga0207679_10102379 Ga0207679_101023791 265
3 3300037312 Ga0395899_0325876 Ga0395899_0325876_38_838 266
4 3300009093 Ga0105240_10281269 Ga0105240_102812692 282
5 3300025913 Ga0207695_10089977 Ga0207695_100899772 282
6 3300013307 Ga0157372_10311186 Ga0157372_103111862 284
7 3300037418 Ga0395900_0083826 Ga0395900_0083826_317_1273 284
8 3300003214 JGI25165J46597_1000095 JGI25165J46597_100009579 286
9 3300025261 Ga0209233_1000052 Ga0209233_100005279 286
10 3300046471 Ga0495650_0083573 Ga0495650_0083573_12_1028 286
11 3300053136 Ga0500559_0007293 Ga0500559_0007293_2225_3184 288
12 3300006058 Ga0075432_10000231 Ga0075432_1000023112 289
13 3300006353 Ga0075370_10077210 Ga0075370_100772102 289
14 3300027907 Ga0207428_10161691 Ga0207428_101616913 289
15 3300005548 Ga0070665_100004466 Ga0070665_10000446612 290
16 3300028379 Ga0268266_10001436 Ga0268266_1000143632 290
17 3300005327 Ga0070658_10032003 Ga0070658_100320034 291
18 3300005457 Ga0070662_100058338 Ga0070662_1000583383 291
19 3300005535 Ga0070684_100305540 Ga0070684_1003055402 291
20 3300025907 Ga0207645_10013313 Ga0207645_100133134 291
21 3300025920 Ga0207649_10052508 Ga0207649_100525081 291
22 3300025933 Ga0207706_10054805 Ga0207706_100548051 291
23 3300025945 Ga0207679_10439652 Ga0207679_104396522 291
24 3300028379 Ga0268266_10077831 Ga0268266_100778313 291
25 3300037466 Ga0395898_0661139 Ga0395898_0661139_32_907 291
26 3300045836 Ga0466958_0322797 Ga0466958_0322797_94_969 291
27 3300048911 Ga0496108_0236432 Ga0496108_0236432_550_1425 291
28 3300048913 Ga0496110_0162168 Ga0496110_0162168_326_1201 291
29 3300048914 Ga0496111_0177135 Ga0496111_0177135_52_927 291
30 3300048917 Ga0496114_0000033 Ga0496114_0000033_31385_32260 291
31 3300005327 Ga0070658_10214469 Ga0070658_102144692 292
32 3300005614 Ga0068856_100090409 Ga0068856_1000904094 292
33 3300005616 Ga0068852_100005800 Ga0068852_1000058005 292
34 3300009551 Ga0105238_10062348 Ga0105238_100623481 292
35 3300013105 Ga0157369_10038460 Ga0157369_100384601 292
36 3300025909 Ga0207705_10255767 Ga0207705_102557672 292
37 3300025924 Ga0207694_10039652 Ga0207694_100396523 292
38 3300047472 Ga0495686_0009860 Ga0495686_0009860_3487_4446 292
39 3300005841 Ga0068863_100048795 Ga0068863_1000487953 295
40 3300005842 Ga0068858_100000665 Ga0068858_10000066527 295
41 3300005937 Ga0081455_10003862 Ga0081455_1000386211 295
42 3300009098 Ga0105245_10013186 Ga0105245_100131862 295
43 3300009551 Ga0105238_10486750 Ga0105238_104867502 295
44 3300013296 Ga0157374_10389926 Ga0157374_103899261 295
45 3300025927 Ga0207687_10000913 Ga0207687_1000091319 295
46 3300031616 Ga0307508_10002317 Ga0307508_100023174 295
47 3300046492 Ga0495585_0019319 Ga0495585_0019319_740_1723 295
48 3300047472 Ga0495686_0006990 Ga0495686_0006990_2711_3670 295
49 3300048918 Ga0496115_0236366 Ga0496115_0236366_80_1066 295
50 3300053119 Ga0500595_030912 Ga0500595_030912_267_1250 295
51 3300053136 Ga0500559_0065478 Ga0500559_0065478_504_1490 295
52 3300005539 Ga0068853_100022915 Ga0068853_1000229156 298
53 3300006871 Ga0075434_100071868 Ga0075434_1000718682 298
54 3300020070 Ga0206356_11118989 Ga0206356_111189893 298
55 3300005548 Ga0070665_100002093 Ga0070665_10000209314 301
56 3300028379 Ga0268266_10000584 Ga0268266_1000058428 301
57 3300033180 Ga0307510_10173649 Ga0307510_101736492 302
58 3300048905 Ga0496102_0000049 Ga0496102_0000049_41385_42347 302
59 3300048906 Ga0496103_0000037 Ga0496103_0000037_137128_138090 302
60 3300048920 Ga0496117_0000115 Ga0496117_0000115_41385_42347 302
61 3300048921 Ga0496118_0000086 Ga0496118_0000086_137142_138104 302
62 3300048927 Ga0496124_0000102 Ga0496124_0000102_137142_138104 302
63 3300045976 Ga0466967_0059514 Ga0466967_0059514_406_1365 304
64 3300048913 Ga0496110_0657160 Ga0496110_0657160_12_926 304
65 3300002067 JGI24735J21928_10013604 JGI24735J21928_100136042 305
66 3300037471 Ga0395905_0038825 Ga0395905_0038825_1457_2377 306
67 3300045051 Ga0451576_0000017 Ga0451576_0000017_494503_495486 306
68 3300046660 Ga0495625_0000054 Ga0495625_0000054_40988_41974 307
69 3300046520 Ga0495637_0043389 Ga0495637_0043389_192_1175 309
70 3300005347 Ga0070668_100011688 Ga0070668_1000116882 311
71 3300025972 Ga0207668_10017061 Ga0207668_100170612 311
72 3300038443 Ga0395901_0398159 Ga0395901_0398159_256_1194 311
73 3300044735 Ga0466968_0044437 Ga0466968_0044437_637_1572 311
74 3300053139 Ga0500568_0047569 Ga0500568_0047569_639_1625 311
75 iso_pu_bacteria 2928027323 2928029630 313
76 iso_pu_bacteria 2984555340 2984555736 313
77 iso_pu_bacteria 2984564862 2984566154 313
78 iso_pu_bacteria 2993356040 2993357166 313
79 iso_pu_bacteria 2582581305 2585259734 314
80 3300005539 Ga0068853_100101308 Ga0068853_1001013083 315
81 3300005985 Ga0081539_10055567 Ga0081539_100555673 315
82 3300026041 Ga0207639_10063532 Ga0207639_100635322 315
83 3300053096 Ga0500641_0006184 Ga0500641_0006184_1832_2779 315
84 3300053119 Ga0500595_002284 Ga0500595_002284_1343_2290 315
85 3300053730 Ga0500645_027871 Ga0500645_027871_637_1584 315
86 3300001979 JGI24740J21852_10003291 JGI24740J21852_100032915 316
87 3300001979 JGI24740J21852_10004528 JGI24740J21852_100045282 316
88 3300001991 JGI24743J22301_10008600 JGI24743J22301_100086003 316
89 3300005327 Ga0070658_10028143 Ga0070658_100281433 316
90 3300005327 Ga0070658_10144046 Ga0070658_101440462 316
91 3300005329 Ga0070683_100004201 Ga0070683_1000042016 316
92 3300005344 Ga0070661_100050569 Ga0070661_1000505691 316
93 3300005355 Ga0070671_100164777 Ga0070671_1001647772 316
94 3300005548 Ga0070665_100083417 Ga0070665_1000834174 316
95 3300006844 Ga0075428_100059878 Ga0075428_1000598785 316
96 3300031995 Ga0307409_100405332 Ga0307409_1004053321 316
97 3300037312 Ga0395899_0059267 Ga0395899_0059267_750_1703 316
98 3300037418 Ga0395900_0021149 Ga0395900_0021149_4818_5777 316
99 3300037418 Ga0395900_0095260 Ga0395900_0095260_2022_2981 316
100 3300049823 Ga0501044_0162469 Ga0501044_0162469_297_1250 316
101 iso_pu_bacteria 2830075706 2830079001 316
102 3300005366 Ga0070659_100046364 Ga0070659_1000463643 317
103 3300005578 Ga0068854_100038574 Ga0068854_1000385743 317
104 3300009545 Ga0105237_10018447 Ga0105237_100184473 317
105 3300009551 Ga0105238_10311725 Ga0105238_103117251 317
106 3300015690 Ga0183363_1002 Ga0183363_100285 317
107 3300025914 Ga0207671_10011627 Ga0207671_100116276 317
108 3300025981 Ga0207640_10127763 Ga0207640_101277632 317
109 3300026116 Ga0207674_10022103 Ga0207674_100221036 317
110 3300035695 Ga0373927_0039896 Ga0373927_0039896_1421_2377 317
111 3300046522 Ga0495643_0061406 Ga0495643_0061406_871_1827 317
112 3300046660 Ga0495625_0154924 Ga0495625_0154924_202_1158 317
113 3300046684 Ga0495669_0030150 Ga0495669_0030150_767_1723 317
114 3300048924 Ga0496121_0033616 Ga0496121_0033616_1309_2265 317
115 3300050509 nmdc:mga0qj67_12207_c1 nmdc:mga0qj67_12207_c1_5467_6420 317
116 3300053093 Ga0500651_0001548 Ga0500651_0001548_7583_8539 317
117 3300053123 Ga0500614_006469 Ga0500614_006469_692_1648 317
118 3300053125 Ga0500618_004544 Ga0500618_004544_955_1911 317
119 3300053130 Ga0500642_0000670 Ga0500642_0000670_2062_3018 317
120 3300053133 Ga0500655_000261 Ga0500655_000261_6223_7179 317
121 3300053156 Ga0500622_0006686 Ga0500622_0006686_285_1241 317
122 3300053177 Ga0500636_0185874 Ga0500636_0185874_13_969 317
123 3300053724 Ga0500570_013169 Ga0500570_013169_1389_2345 317
124 3300005338 Ga0068868_100000191 Ga0068868_1000001915 318
125 3300005339 Ga0070660_100020234 Ga0070660_1000202343 318
126 3300005347 Ga0070668_100000034 Ga0070668_10000003432 318
127 3300005353 Ga0070669_100098525 Ga0070669_1000985251 318
128 3300005355 Ga0070671_100000135 Ga0070671_10000013536 318
129 3300005366 Ga0070659_100000029 Ga0070659_100000029116 318
130 3300005544 Ga0070686_100001142 Ga0070686_10000114216 318
131 3300005548 Ga0070665_100000154 Ga0070665_10000015463 318
132 3300005548 Ga0070665_100025575 Ga0070665_1000255752 318
133 3300005617 Ga0068859_100194041 Ga0068859_1001940412 318
134 3300005841 Ga0068863_100000020 Ga0068863_10000002084 318
135 3300005844 Ga0068862_100009472 Ga0068862_1000094725 318
136 3300005985 Ga0081539_10007865 Ga0081539_100078657 318
137 3300006931 Ga0097620_100194049 Ga0097620_1001940493 318
138 3300009098 Ga0105245_10030191 Ga0105245_100301914 318
139 3300009098 Ga0105245_10068918 Ga0105245_100689182 318
140 3300009177 Ga0105248_10026937 Ga0105248_100269374 318
141 3300013105 Ga0157369_10013611 Ga0157369_100136114 318
142 3300013105 Ga0157369_10277190 Ga0157369_102771902 318
143 3300020082 Ga0206353_11529424 Ga0206353_115294243 318
144 3300025919 Ga0207657_10008261 Ga0207657_100082617 318
145 3300025927 Ga0207687_10168311 Ga0207687_101683112 318
146 3300025931 Ga0207644_10000162 Ga0207644_100001627 318
147 3300025932 Ga0207690_10000004 Ga0207690_10000004677 318
148 3300025941 Ga0207711_10060769 Ga0207711_100607692 318
149 3300025972 Ga0207668_10000163 Ga0207668_100001636 318
150 3300026023 Ga0207677_10000080 Ga0207677_1000008033 318
151 3300026088 Ga0207641_10000001 Ga0207641_100000011033 318
152 3300026088 Ga0207641_10017507 Ga0207641_100175078 318
153 3300028379 Ga0268266_10014676 Ga0268266_100146763 318
154 3300028380 Ga0268265_10007326 Ga0268265_100073261 318
155 3300046616 Ga0495668_0028583 Ga0495668_0028583_953_1912 318
156 3300048928 Ga0496125_0066879 Ga0496125_0066879_172_1131 318
157 3300050512 nmdc:mga0n895_157945_c1 nmdc:mga0n895_157945_c1_779_1735 318
158 3300053087 Ga0500643_006044 Ga0500643_006044_2187_3146 318
159 3300053116 Ga0500592_000434 Ga0500592_000434_5162_6121 318
160 3300060353 Ga0501082_0370156 Ga0501082_0370156_222_1235 318
161 3300048924 Ga0496121_0069679 Ga0496121_0069679_841_1827 319
162 3300049513 Ga0501290_000167 Ga0501290_000167_531_1490 319
163 3300049515 Ga0501292_000027 Ga0501292_000027_2592_3551 319
164 3300049517 Ga0501294_000100 Ga0501294_000100_6114_7073 319
165 3300049523 Ga0501300_000242 Ga0501300_000242_6843_7802 319
166 3300049652 Ga0501202_010966 Ga0501202_010966_353_1312 319
167 3300049662 Ga0501222_002186 Ga0501222_002186_1432_2391 319
168 3300049663 Ga0501223_004256 Ga0501223_004256_543_1502 319
169 3300049665 Ga0501227_014172 Ga0501227_014172_470_1429 319
170 3300049688 Ga0501259_001688 Ga0501259_001688_1753_2712 319
171 3300049690 Ga0501261_000011 Ga0501261_000011_2609_3568 319
172 3300049775 Ga0501279_000010 Ga0501279_000010_82908_83867 319
173 3300049776 Ga0501280_000071 Ga0501280_000071_5000_5959 319
174 3300049778 Ga0501282_000189 Ga0501282_000189_74_1033 319
175 3300053096 Ga0500641_0028333 Ga0500641_0028333_74_1060 319
176 3300053153 Ga0500616_0016244 Ga0500616_0016244_1470_2456 319
177 3300001904 JGI24736J21556_1000195 JGI24736J21556_10001953 320
178 3300001976 JGI24752J21851_1002134 JGI24752J21851_10021342 320
179 3300001979 JGI24740J21852_10001256 JGI24740J21852_100012565 320
180 3300001989 JGI24739J22299_10012434 JGI24739J22299_100124341 320
181 3300001989 JGI24739J22299_10031389 JGI24739J22299_100313892 320
182 3300001990 JGI24737J22298_10003444 JGI24737J22298_100034443 320
183 3300002067 JGI24735J21928_10005461 JGI24735J21928_100054614 320
184 3300002070 JGI24750J21931_1000221 JGI24750J21931_10002211 320
185 3300002074 JGI24748J21848_1000042 JGI24748J21848_100004216 320
186 3300002074 JGI24748J21848_1000062 JGI24748J21848_100006235 320
187 3300002075 JGI24738J21930_10005019 JGI24738J21930_100050195 320
188 3300002239 JGI24034J26672_10000035 JGI24034J26672_1000003516 320
189 3300002244 JGI24742J22300_10007033 JGI24742J22300_100070331 320
190 3300005295 Ga0065707_10081794 Ga0065707_100817942 320
191 3300005327 Ga0070658_10034288 Ga0070658_100342885 320
192 3300005330 Ga0070690_100000009 Ga0070690_100000009122 320
193 3300005335 Ga0070666_10000006 Ga0070666_10000006109 320
194 3300005340 Ga0070689_100001313 Ga0070689_10000131318 320
195 3300005347 Ga0070668_100032834 Ga0070668_1000328344 320
196 3300005353 Ga0070669_100000095 Ga0070669_10000009597 320
197 3300005365 Ga0070688_100008026 Ga0070688_1000080264 320
198 3300005367 Ga0070667_100029744 Ga0070667_1000297442 320
199 3300005457 Ga0070662_100013541 Ga0070662_1000135414 320
200 3300005457 Ga0070662_100032436 Ga0070662_1000324361 320
201 3300005466 Ga0070685_10000391 Ga0070685_100003919 320
202 3300005539 Ga0068853_100006030 Ga0068853_10000603011 320
203 3300005539 Ga0068853_100278975 Ga0068853_1002789752 320
204 3300005544 Ga0070686_100000022 Ga0070686_10000002220 320
205 3300005548 Ga0070665_100000019 Ga0070665_100000019279 320
206 3300005564 Ga0070664_100063714 Ga0070664_1000637143 320
207 3300005617 Ga0068859_100112374 Ga0068859_1001123742 320
208 3300005618 Ga0068864_100012850 Ga0068864_1000128502 320
209 3300005719 Ga0068861_100006310 Ga0068861_1000063108 320
210 3300005834 Ga0068851_10039001 Ga0068851_100390012 320
211 3300005841 Ga0068863_100000048 Ga0068863_10000004812 320
212 3300005843 Ga0068860_100000014 Ga0068860_100000014108 320
213 3300005844 Ga0068862_100000613 Ga0068862_1000006134 320
214 3300006931 Ga0097620_100112378 Ga0097620_1001123782 320
215 3300009011 Ga0105251_10109558 Ga0105251_101095581 320
216 3300009101 Ga0105247_10086493 Ga0105247_100864932 320
217 3300009177 Ga0105248_10061465 Ga0105248_100614653 320
218 3300009553 Ga0105249_10000104 Ga0105249_1000010411 320
219 3300013100 Ga0157373_10042435 Ga0157373_100424353 320
220 3300013104 Ga0157370_10011496 Ga0157370_100114964 320
221 3300013297 Ga0157378_10045946 Ga0157378_100459464 320
222 3300013307 Ga0157372_10202816 Ga0157372_102028164 320
223 3300014325 Ga0163163_10013524 Ga0163163_100135245 320
224 3300014326 Ga0157380_10002492 Ga0157380_1000249212 320
225 3300014326 Ga0157380_10003668 Ga0157380_100036683 320
226 3300014968 Ga0157379_10030059 Ga0157379_100300596 320
227 3300017792 Ga0163161_10000020 Ga0163161_100000209 320
228 3300025223 Ga0207672_1001948 Ga0207672_10019481 320
229 3300025321 Ga0207656_10020581 Ga0207656_100205812 320
230 3300025903 Ga0207680_10000011 Ga0207680_10000011107 320
231 3300025904 Ga0207647_10003070 Ga0207647_1000307012 320
232 3300025909 Ga0207705_10034035 Ga0207705_100340355 320
233 3300025911 Ga0207654_10015796 Ga0207654_100157963 320
234 3300025913 Ga0207695_10008652 Ga0207695_100086524 320
235 3300025914 Ga0207671_10007141 Ga0207671_100071414 320
236 3300025919 Ga0207657_10017713 Ga0207657_100177134 320
237 3300025923 Ga0207681_10001112 Ga0207681_100011125 320
238 3300025924 Ga0207694_10005230 Ga0207694_100052307 320
239 3300025924 Ga0207694_10054456 Ga0207694_100544562 320
240 3300025931 Ga0207644_10018271 Ga0207644_100182715 320
241 3300025933 Ga0207706_10009911 Ga0207706_100099112 320
242 3300025936 Ga0207670_10000902 Ga0207670_1000090219 320
243 3300025949 Ga0207667_10005823 Ga0207667_1000582314 320
244 3300025961 Ga0207712_10000013 Ga0207712_10000013107 320
245 3300025972 Ga0207668_10043443 Ga0207668_100434432 320
246 3300025986 Ga0207658_10001912 Ga0207658_100019127 320
247 3300026041 Ga0207639_10409284 Ga0207639_104092842 320
248 3300026067 Ga0207678_10008840 Ga0207678_100088404 320
249 3300026078 Ga0207702_10006296 Ga0207702_100062964 320
250 3300026088 Ga0207641_10000101 Ga0207641_1000010134 320
251 3300026095 Ga0207676_10002005 Ga0207676_100020052 320
252 3300026116 Ga0207674_10042504 Ga0207674_100425043 320
253 3300026118 Ga0207675_100000640 Ga0207675_10000064038 320
254 3300028379 Ga0268266_10000025 Ga0268266_10000025224 320
255 3300028380 Ga0268265_10000345 Ga0268265_1000034512 320
256 3300028381 Ga0268264_10000037 Ga0268264_10000037107 320
257 3300031548 Ga0307408_100172675 Ga0307408_1001726752 320
258 3300031911 Ga0307412_10272267 Ga0307412_102722671 320
259 3300046530 Ga0495654_0002113 Ga0495654_0002113_10762_11724 320
260 3300046616 Ga0495668_0003098 Ga0495668_0003098_10043_11005 320
261 3300046616 Ga0495668_0022168 Ga0495668_0022168_2169_3131 320
262 3300048903 Ga0496100_0045587 Ga0496100_0045587_295_1257 320
263 3300048904 Ga0496101_0050762 Ga0496101_0050762_644_1606 320
264 3300048909 Ga0496106_0054079 Ga0496106_0054079_21_983 320
265 3300048920 Ga0496117_0010620 Ga0496117_0010620_6737_7699 320
266 3300048921 Ga0496118_0003608 Ga0496118_0003608_11318_12280 320
267 3300049459 Ga0495678_052572 Ga0495678_052572_303_1265 320
268 3300053087 Ga0500643_000375 Ga0500643_000375_11163_12125 320
269 3300053158 Ga0500627_0000380 Ga0500627_0000380_7783_8745 320

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

186

281

0.98

PF01022

HTH_5

Bacterial regulatory protein, arsR family

44

90

0.97

PF12840

HTH_20

Helix-turn-helix domain

42

91

0.96

PF13649

Methyltransf_25

Methyltransferase domain

185

277

0.95

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

44

89

0.95

PF12802

MarR_2

MarR family

44

95

0.94

PF08242

Methyltransf_12

Methyltransferase domain

186

279

0.93

PF13847

Methyltransf_31

Methyltransferase domain

179

329

0.89

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

143

297

0.86

PF05175

MTS

Methyltransferase small domain

169

294

0.84

PF13489

Methyltransf_23

Methyltransferase domain

161

324

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ghb-assembly1.cif.gz_B crystal structure of spx in complex with yjbh (oxidized) 0.9191 27 72
4ggg-assembly2.cif.gz_B crystal structure of v66a/l68v czra in the zn(ii)bound state. 0.919 2 85
2zme-assembly1.cif.gz_B integrated structural and functional model of the human escrt-ii complex 0.9152 27 71
3cuq-assembly1.cif.gz_B integrated structural and functional model of the human escrt-ii complex 0.9021 27 70
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.9013 14 70
ID Description Score Start End Superfamily
2v9vA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9486 27 69 1.10.10.10
af_Q4DZU8_467_618_3.30.230.130 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Cullin; Chain C, Domain 2 0.9398 27 71 3.30.230.130
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9384 13 69 1.10.10.10
1sfuB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.933 27 71 1.10.10.10
af_Q57682_5_95_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9318 6 72 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A529ZDQ5-F1-model_v4 Class I SAM-dependent methyltransferase 0.9665 135 243 GO:0008757
GO:0032259
AF-A0A2R6CSQ3-F1-model_v4 Methyltransferase domain-containing protein 0.9635 151 231 GO:0008168
GO:0032259
AF-A0A529ZDQ5-F1-model_v4 Class I SAM-dependent methyltransferase 0.9495 135 243 GO:0008757
GO:0032259
AF-H1PJ79-F1-model_v4 HTH arsR-type domain-containing protein 0.9412 2 87 GO:0003700
AF-A0A2N6CEJ4-F1-model_v4 deleted 0.9338 153 251

Feature Viewer

pLDDT pTM Quality
82.2 0.6 Medium
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Predicted Structure (AlphaFold2)

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