F375419

General Info

Members Datasets Scaffolds Average Seq Length
268 148 267 520

Family's Representative Sequence

Representative Sequence 3300006852|Ga0075433_10061496|Ga0075433_100614962
Length 557
Sequence MAQSIPAKAEAPEIISRNPATGEEIGRAPLTMPEEVARAVDRARGAQPLWANKSFRDRGRVILRARKTILKELDEIALLISRETGKPASEAVAMEMAGSLDLMQYFARRTESLLQRERISIGLYNWLGRTSYLVYKPIGVVGIISPWNFPWATPLDEVVMALMAGNAVVLKPSELTPLTGLKIKEVLDRAGLPEGLLEVVTGDGSTGAALMGAGVDKVMFTGSVATGKRVAEAAANYLIPVVLELGGKDAMIVLEDANIENAARGAIWGAFANCGQSCAAVERCYVHESIAQKFTDAVVAETKRLIVGTRTPRPHVSEPGATATGSQAQLEPKRAIRAGGAPALPVYDIGSMSSEQQLRIVERHVYEATANGAKALTGGERTADADGPFFPPTVLTNVNHEMAVMREETFGPVLPIMSFKTDDEAVRLANDSDYGLTASVWTSDLSRGKRIAEQIEAGTVTINEVLYTHSIAQTPWSGVKQSGFGSTHGRAGLLELVNAQHIHINRFPFMPDVWWFSYTPSAGKLFRSLARRFASGSIVQTLLVLPQMIRRWRERRS

Samples

Sample ID Description Type Environment
1 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
4 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
28 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
29 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
30 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
31 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
32 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
33 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
44 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
49 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
117 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
118 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
119 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
120 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
121 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
122 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
130 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
131 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
136 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
137 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
138 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
139 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
140 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
141 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
142 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
145 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
146 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
147 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
148 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.63
Metatranscriptomes 0
Isolates 0.37

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.87
Rhizosphere 97.76
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 CNAas_1001275 3300000532 Bacteria 2213
2 JGI24748J21848_1000002 3300002074 Bacteria 426946
3 JGI24034J26672_10000004 3300002239 Bacteria 426946
4 JGI24751J29686_10000044 3300002459 Bacteria 77576
5 Ga0065714_10064531 3300005288 Bacteria 40961
6 Ga0065704_10003844 3300005289 Bacteria 7036
7 Ga0065712_10000123 3300005290 Bacteria 89338
8 Ga0065715_10089361 3300005293 Bacteria 10882
9 Ga0065715_10114767 3300005293 Unclassified 2439
10 Ga0065715_10151601 3300005293 Bacteria 1717
11 Ga0065707_10111342 3300005295 Unclassified 2398
12 Ga0070676_10050247 3300005328 Bacteria 2444
13 Ga0070690_100001410 3300005330 Bacteria 12551
14 Ga0070670_100000144 3300005331 Bacteria 66583
15 Ga0070670_100050001 3300005331 Bacteria 3593
16 Ga0070670_100066638 3300005331 Unclassified 3090
17 Ga0070670_100088141 3300005331 Bacteria 2667
18 Ga0068869_100007198 3300005334 Bacteria 7093
19 Ga0068869_100032206 3300005334 Unclassified 3693
20 Ga0068869_100123150 3300005334 Unclassified 1985
21 Ga0070666_10049483 3300005335 Plasmid 2825
22 Ga0070680_100000159 3300005336 Bacteria 42393
23 Ga0070680_100035514 3300005336 Bacteria 4025
24 Ga0068868_100031725 3300005338 Bacteria 4061
25 Ga0068868_100088529 3300005338 Bacteria 2492
26 Ga0070689_100001209 3300005340 Bacteria 16353
27 Ga0070692_10029191 3300005345 Unclassified 2748
28 Ga0070692_10079582 3300005345 Unclassified 1762
29 Ga0070669_100040922 3300005353 Unclassified 3369
30 Ga0070671_100003832 3300005355 Bacteria 11813
31 Ga0070671_100161190 3300005355 Unclassified 1896
32 Ga0070673_100174157 3300005364 Archaea 1838
33 Ga0070703_10000060 3300005406 Bacteria 54329
34 Ga0070705_100006661 3300005440 Bacteria 5678
35 Ga0070700_100000062 3300005441 Bacteria 79866
36 Ga0070700_100024166 3300005441 Bacteria 3564
37 Ga0070700_100119300 3300005441 Bacteria 1765
38 Ga0070694_100000723 3300005444 Bacteria 18418
39 Ga0070694_100121673 3300005444 Bacteria 1873
40 Ga0070708_100001183 3300005445 Bacteria 20061
41 Ga0070681_10000078 3300005458 Bacteria 71959
42 Ga0070681_10052463 3300005458 Bacteria 4067
43 Ga0068867_100059173 3300005459 Unclassified 2840
44 Ga0070706_100000137 3300005467 Bacteria 91778
45 Ga0070706_100004019 3300005467 Bacteria 14291
46 Ga0070706_100162635 3300005467 Bacteria 2084
47 Ga0070706_100187350 3300005467 Bacteria 1933
48 Ga0070707_100000054 3300005468 Bacteria 100665
49 Ga0070707_100029790 3300005468 Bacteria 5194
50 Ga0070707_100087201 3300005468 Bacteria 3019
51 Ga0070707_100090275 3300005468 Bacteria 2966
52 Ga0070707_100100311 3300005468 Bacteria 2805
53 Ga0070698_100000107 3300005471 Bacteria 69457
54 Ga0070698_100015751 3300005471 Bacteria 7986
55 Ga0070698_100016175 3300005471 Bacteria 7877
56 Ga0070698_100031090 3300005471 Bacteria 5535
57 Ga0070698_100104856 3300005471 Bacteria 2797
58 Ga0070699_100002296 3300005518 Bacteria 17204
59 Ga0070699_100005850 3300005518 Bacteria 10747
60 Ga0070699_100057716 3300005518 Bacteria 3362
61 Ga0070679_100000047 3300005530 Bacteria 90654
62 Ga0070679_100176593 3300005530 Unclassified 2108
63 Ga0070697_100016244 3300005536 Bacteria 5852
64 Ga0070697_100019045 3300005536 Bacteria 5416
65 Ga0070697_100058301 3300005536 Bacteria 3142
66 Ga0070695_100017302 3300005545 Bacteria 4371
67 Ga0070696_100076793 3300005546 Bacteria 2359
68 Ga0070693_100001695 3300005547 Bacteria 10006
69 Ga0070693_100004277 3300005547 Bacteria 6739
70 Ga0070693_100027504 3300005547 Unclassified 3084
71 Ga0070704_100003900 3300005549 Bacteria 8582
72 Ga0070704_100033907 3300005549 Bacteria 3457
73 Ga0070704_100038121 3300005549 Bacteria 3290
74 Ga0068856_100019294 3300005614 Bacteria 6618
75 Ga0068852_100108476 3300005616 Bacteria 2520
76 Ga0068859_100012226 3300005617 Bacteria 8632
77 Ga0068859_100036826 3300005617 Bacteria 4912
78 Ga0068859_100050640 3300005617 Bacteria 4172
79 Ga0068859_100071724 3300005617 Unclassified 3499
80 Ga0068859_100088931 3300005617 Bacteria 3138
81 Ga0068859_100218781 3300005617 Bacteria 1992
82 Ga0068859_100262540 3300005617 Unclassified 1818
83 Ga0068864_100011609 3300005618 Bacteria 7273
84 Ga0068864_100024634 3300005618 Bacteria 5062
85 Ga0068864_100039600 3300005618 Unclassified 4028
86 Ga0068864_100050552 3300005618 Unclassified 3578
87 Ga0068861_100018727 3300005719 Unclassified 4935
88 Ga0068861_100079551 3300005719 Bacteria 2563
89 Ga0068851_10018021 3300005834 Unclassified 3399
90 Ga0068863_100032855 3300005841 Bacteria 4944
91 Ga0068863_100120701 3300005841 Bacteria 2499
92 Ga0068863_100176804 3300005841 Bacteria 2049
93 Ga0068858_100006992 3300005842 Bacteria 10961
94 Ga0068858_100078504 3300005842 Bacteria 3068
95 Ga0068858_100221334 3300005842 Bacteria 1793
96 Ga0068862_100167059 3300005844 Unclassified 1967
97 Ga0081539_10000422 3300005985 Bacteria 90043
98 Ga0081539_10002204 3300005985 Bacteria 28480
99 Ga0081539_10027497 3300005985 Bacteria 3600
100 Ga0070715_10000020 3300006163 Bacteria 119605
101 Ga0070716_100000008 3300006173 Bacteria 182956
102 Ga0097621_100023163 3300006237 Bacteria 4831
103 Ga0068871_100052306 3300006358 Unclassified 3308
104 Ga0075428_100218624 3300006844 Bacteria 2058
105 Ga0075433_10005194 3300006852 Bacteria 10201
106 Ga0075433_10020978 3300006852 Bacteria 5472
107 Ga0075433_10061496 3300006852 Unclassified 3289
108 Ga0075433_10082554 3300006852 Bacteria 2834
109 Ga0075434_100000642 3300006871 Bacteria 27039
110 Ga0075434_100028648 3300006871 Bacteria 5475
111 Ga0075434_100033963 3300006871 Bacteria 5034
112 Ga0075434_100118452 3300006871 Bacteria 2662
113 Ga0068865_100021763 3300006881 Unclassified 4174
114 Ga0075436_100000020 3300006914 Bacteria 124822
115 Ga0097620_100012226 3300006931 Bacteria 8632
116 Ga0097620_100050639 3300006931 Bacteria 4172
117 Ga0097620_100071725 3300006931 Unclassified 3499
118 Ga0097620_100088926 3300006931 Bacteria 3138
119 Ga0097620_100218786 3300006931 Bacteria 1992
120 Ga0097620_100262532 3300006931 Unclassified 1818
121 Ga0075435_100000717 3300007076 Bacteria 20581
122 Ga0105240_10217596 3300009093 Bacteria 2227
123 Ga0111539_10063384 3300009094 Bacteria 4374
124 Ga0111539_10240383 3300009094 Unclassified 2108
125 Ga0105247_10000005 3300009101 Bacteria 426989
126 Ga0105247_10006019 3300009101 Bacteria 7554
127 Ga0114129_10055898 3300009147 Bacteria 5531
128 Ga0114129_10090750 3300009147 Bacteria 4235
129 Ga0114129_10099991 3300009147 Bacteria 4013
130 Ga0114129_10128166 3300009147 Unclassified 3488
131 Ga0105243_10000350 3300009148 Bacteria 49215
132 Ga0105243_10000371 3300009148 Bacteria 48179
133 Ga0105243_10142097 3300009148 Bacteria 2049
134 Ga0105242_10000477 3300009176 Bacteria 31836
135 Ga0105242_10001799 3300009176 Bacteria 16901
136 Ga0105242_10059496 3300009176 Bacteria 3135
137 Ga0105248_10000861 3300009177 Bacteria 34162
138 Ga0105248_10016546 3300009177 Bacteria 8122
139 Ga0105248_10032658 3300009177 Bacteria 5815
140 Ga0105237_10000903 3300009545 Bacteria 39910
141 Ga0105238_10001253 3300009551 Bacteria 25546
142 Ga0105249_10025276 3300009553 Bacteria 5344
143 Ga0105249_10217139 3300009553 Bacteria 1880
144 Ga0105239_10015422 3300010375 Bacteria 8464
145 Ga0105239_10057086 3300010375 Bacteria 4282
146 Ga0105239_10065259 3300010375 Unclassified 3997
147 Ga0105246_10048312 3300011119 Bacteria 2909
148 Ga0157378_10000095 3300013297 Bacteria 84288
149 Ga0157378_10008171 3300013297 Bacteria 9131
150 Ga0157378_10167235 3300013297 Bacteria 2060
151 Ga0163162_10006040 3300013306 Bacteria 11721
152 Ga0163162_10034731 3300013306 Bacteria 5020
153 Ga0157372_10010237 3300013307 Bacteria 9957
154 Ga0157372_10062477 3300013307 Unclassified 4173
155 Ga0157375_10007387 3300013308 Bacteria 9621
156 Ga0157375_10040520 3300013308 Unclassified 4490
157 Ga0157375_10083828 3300013308 Bacteria 3234
158 Ga0157375_10192828 3300013308 Unclassified 2192
159 Ga0163163_10001085 3300014325 Bacteria 23094
160 Ga0163163_10006946 3300014325 Bacteria 9946
161 Ga0163163_10027906 3300014325 Bacteria 5413
162 Ga0157380_10019396 3300014326 Bacteria 5067
163 Ga0157380_10140822 3300014326 Bacteria 2072
164 Ga0157377_10034124 3300014745 Bacteria 2782
165 Ga0157379_10060639 3300014968 Bacteria 3382
166 Ga0157376_10033317 3300014969 Unclassified 4147
167 Ga0163161_10022465 3300017792 Bacteria 4443
168 Ga0207656_10001007 3300025321 Bacteria 9204
169 Ga0207653_10001789 3300025885 Bacteria 6875
170 Ga0207642_10023723 3300025899 Bacteria 2455
171 Ga0207710_10000004 3300025900 Bacteria 846540
172 Ga0207710_10003462 3300025900 Bacteria 7035
173 Ga0207680_10036677 3300025903 Unclassified 2825
174 Ga0207685_10000008 3300025905 Bacteria 273136
175 Ga0207684_10000314 3300025910 Bacteria 68706
176 Ga0207684_10005631 3300025910 Bacteria 11514
177 Ga0207684_10006372 3300025910 Bacteria 10759
178 Ga0207684_10020984 3300025910 Bacteria 5578
179 Ga0207684_10038022 3300025910 Bacteria 4084
180 Ga0207707_10000006 3300025912 Bacteria 374131
181 Ga0207695_10008579 3300025913 Bacteria 12771
182 Ga0207671_10243109 3300025914 Bacteria 1414
183 Ga0207662_10025191 3300025918 Plasmid 3426
184 Ga0207662_10064645 3300025918 Unclassified 2201
185 Ga0207646_10000225 3300025922 Bacteria 77485
186 Ga0207646_10002258 3300025922 Bacteria 22924
187 Ga0207646_10099913 3300025922 Bacteria 2600
188 Ga0207646_10102500 3300025922 Bacteria 2566
189 Ga0207681_10067416 3300025923 Unclassified 2481
190 Ga0207694_10000938 3300025924 Bacteria 25703
191 Ga0207650_10000047 3300025925 Bacteria 175675
192 Ga0207650_10023005 3300025925 Bacteria 4416
193 Ga0207644_10002166 3300025931 Bacteria 12739
194 Ga0207644_10014449 3300025931 Bacteria 5281
195 Ga0207686_10000009 3300025934 Bacteria 241706
196 Ga0207686_10000152 3300025934 Bacteria 53030
197 Ga0207686_10002553 3300025934 Bacteria 9893
198 Ga0207686_10013245 3300025934 Bacteria 4560
199 Ga0207686_10065096 3300025934 Bacteria 2323
200 Ga0207709_10000048 3300025935 Bacteria 238474
201 Ga0207709_10001451 3300025935 Bacteria 16514
202 Ga0207665_10000003 3300025939 Bacteria 220666
203 Ga0207711_10010047 3300025941 Bacteria 7867
204 Ga0207711_10057309 3300025941 Unclassified 3349
205 Ga0207711_10077050 3300025941 Unclassified 2905
206 Ga0207689_10012384 3300025942 Bacteria 7296
207 Ga0207689_10032003 3300025942 Unclassified 4375
208 Ga0207651_10134179 3300025960 Unclassified 1901
209 Ga0207640_10066057 3300025981 Unclassified 2416
210 Ga0207703_10001687 3300026035 Bacteria 19864
211 Ga0207703_10074309 3300026035 Bacteria 2815
212 Ga0207708_10000246 3300026075 Bacteria 42577
213 Ga0207708_10031230 3300026075 Unclassified 4042
214 Ga0207708_10054708 3300026075 Bacteria 3043
215 Ga0207708_10219642 3300026075 Bacteria 1522
216 Ga0207641_10168531 3300026088 Unclassified 1997
217 Ga0207648_10083057 3300026089 Bacteria 2794
218 Ga0207676_10008551 3300026095 Bacteria 7275
219 Ga0207676_10015062 3300026095 Bacteria 5574
220 Ga0207676_10041897 3300026095 Bacteria 3518
221 Ga0207676_10081880 3300026095 Bacteria 2624
222 Ga0207674_10074198 3300026116 Bacteria 3414
223 Ga0207675_100002652 3300026118 Bacteria 17652
224 Ga0207675_100098674 3300026118 Unclassified 2751
225 Ga0207428_10013838 3300027907 Bacteria 7029
226 Ga0307408_100031666 3300031548 Unclassified 3684
227 Ga0307413_10022470 3300031824 Unclassified 3400
228 Ga0307410_10002233 3300031852 Bacteria 9247
229 Ga0307412_10022679 3300031911 Unclassified 3853
230 Ga0307409_100020229 3300031995 Bacteria 4532
231 Ga0307416_100041994 3300032002 Unclassified 3566
232 Ga0307414_10003167 3300032004 Bacteria 8745
233 Ga0373951_0000456 3300035091 Bacteria 11829
234 Ga0395900_0162405 3300037418 Unclassified 2278
235 Ga0395905_0180662 3300037471 Bacteria 1981
236 Ga0395901_0210860 3300038443 Unclassified 2033
237 Ga0439442_000203 3300042002 Bacteria 14849
238 Ga0451577_0157519 3300042876 Unclassified 2044
239 Ga0453683_0026426 3300044673 Bacteria 3686
240 Ga0451576_0274774 3300045051 Unclassified 1761
241 Ga0451576_0312888 3300045051 Bacteria 1643
242 Ga0495635_0118579 3300046663 Bacteria 1806
243 Ga0495670_0018490 3300046691 Unclassified 3431
244 Ga0496102_0026999 3300048905 Bacteria 5127
245 Ga0496104_0015282 3300048907 Bacteria 6951
246 Ga0496106_0016545 3300048909 Bacteria 5456
247 Ga0496106_0039951 3300048909 Bacteria 3513
248 Ga0496107_0066122 3300048910 Bacteria 2621
249 Ga0501038_0007240 3300049574 Bacteria 10248
250 Ga0501198_000451 3300049649 Bacteria 5088
251 Ga0501207_000536 3300049654 Unclassified 4313
252 Ga0501217_006179 3300049661 Bacteria 2534
253 Ga0501223_000399 3300049663 Bacteria 10644
254 Ga0501235_003331 3300049669 Unclassified 3472
255 Ga0501249_007349 3300049679 Unclassified 2275
256 Ga0501225_0003021 3300049705 Bacteria 5136
257 Ga0501225_0009799 3300049705 Bacteria 2722
258 Ga0501234_001148 3300049707 Bacteria 4179
259 nmdc:mga08y16_120823_c1 3300050511 Unclassified 2726
260 nmdc:mga08y16_224340_c1 3300050511 Unclassified 1945
261 nmdc:mga0n895_22879_c1 3300050512 Bacteria 5863
262 nmdc:mga0n895_49457_c1 3300050512 Bacteria 4119
263 nmdc:mga0rr50_98_c1 3300050513 Bacteria 48790
264 nmdc:mga08x19_3_c1 3300050514 Bacteria 654433
265 nmdc:mga0a205_32561_c1 3300050515 Unclassified 4998
266 nmdc:mga0a205_40030_c1 3300050515 Unclassified 4512
267 nmdc:mga0a205_66941_c1 3300050515 Unclassified 3470

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042002 Ga0439442_000203 Ga0439442_000203_269_1702 415
2 iso_pu_bacteria 8056060235 8056061849 415
3 3300009093 Ga0105240_10217596 Ga0105240_102175962 423
4 3300050512 nmdc:mga0n895_49457_c1 nmdc:mga0n895_49457_c1_36_1325 429
5 3300025914 Ga0207671_10243109 Ga0207671_102431091 433
6 3300026075 Ga0207708_10219642 Ga0207708_102196421 452
7 3300025899 Ga0207642_10023723 Ga0207642_100237232 462
8 3300049705 Ga0501225_0009799 Ga0501225_0009799_1312_2706 464
9 3300005617 Ga0068859_100050640 Ga0068859_1000506403 475
10 3300006931 Ga0097620_100050639 Ga0097620_1000506392 475
11 3300045051 Ga0451576_0312888 Ga0451576_0312888_171_1613 479
12 3300013307 Ga0157372_10062477 Ga0157372_100624771 483
13 3300002074 JGI24748J21848_1000002 JGI24748J21848_1000002367 490
14 3300002239 JGI24034J26672_10000004 JGI24034J26672_100000047 490
15 3300005842 Ga0068858_100006992 Ga0068858_1000069925 490
16 3300009101 Ga0105247_10000005 Ga0105247_100000057 490
17 3300025900 Ga0207710_10000004 Ga0207710_100000047 490
18 3300026035 Ga0207703_10001687 Ga0207703_1000168721 490
19 3300005328 Ga0070676_10050247 Ga0070676_100502472 492
20 3300005334 Ga0068869_100007198 Ga0068869_1000071987 492
21 3300005338 Ga0068868_100088529 Ga0068868_1000885291 492
22 3300005441 Ga0070700_100119300 Ga0070700_1001193001 492
23 3300005444 Ga0070694_100121673 Ga0070694_1001216731 492
24 3300005458 Ga0070681_10052463 Ga0070681_100524632 492
25 3300005468 Ga0070707_100100311 Ga0070707_1001003112 492
26 3300005719 Ga0068861_100018727 Ga0068861_1000187272 492
27 3300005985 Ga0081539_10027497 Ga0081539_100274972 492
28 3300006852 Ga0075433_10005194 Ga0075433_100051949 492
29 3300006871 Ga0075434_100000642 Ga0075434_1000006424 492
30 3300006871 Ga0075434_100118452 Ga0075434_1001184521 492
31 3300009147 Ga0114129_10055898 Ga0114129_100558985 492
32 3300009148 Ga0105243_10000350 Ga0105243_1000035017 492
33 3300009176 Ga0105242_10001799 Ga0105242_1000179913 492
34 3300010375 Ga0105239_10015422 Ga0105239_100154224 492
35 3300013297 Ga0157378_10000095 Ga0157378_1000009561 492
36 3300013306 Ga0163162_10006040 Ga0163162_100060402 492
37 3300013308 Ga0157375_10007387 Ga0157375_100073879 492
38 3300025934 Ga0207686_10002553 Ga0207686_100025538 492
39 3300025935 Ga0207709_10001451 Ga0207709_100014519 492
40 3300025981 Ga0207640_10066057 Ga0207640_100660572 492
41 3300026118 Ga0207675_100002652 Ga0207675_10000265212 492
42 3300042876 Ga0451577_0157519 Ga0451577_0157519_403_1971 492
43 3300045051 Ga0451576_0274774 Ga0451576_0274774_235_1716 492
44 3300048909 Ga0496106_0016545 Ga0496106_0016545_1780_3348 492
45 3300050515 nmdc:mga0a205_40030_c1 nmdc:mga0a205_40030_c1_1685_3253 492
46 3300005331 Ga0070670_100066638 Ga0070670_1000666382 493
47 3300005345 Ga0070692_10079582 Ga0070692_100795821 493
48 3300006881 Ga0068865_100021763 Ga0068865_1000217632 493
49 3300009148 Ga0105243_10142097 Ga0105243_101420972 493
50 3300025931 Ga0207644_10002166 Ga0207644_100021662 493
51 3300002459 JGI24751J29686_10000044 JGI24751J29686_1000004440 494
52 3300005288 Ga0065714_10064531 Ga0065714_1006453128 494
53 3300005290 Ga0065712_10000123 Ga0065712_100001239 494
54 3300005293 Ga0065715_10114767 Ga0065715_101147672 494
55 3300005330 Ga0070690_100001410 Ga0070690_1000014104 494
56 3300005331 Ga0070670_100000144 Ga0070670_10000014434 494
57 3300005331 Ga0070670_100050001 Ga0070670_1000500014 494
58 3300005331 Ga0070670_100088141 Ga0070670_1000881412 494
59 3300005334 Ga0068869_100032206 Ga0068869_1000322063 494
60 3300005334 Ga0068869_100123150 Ga0068869_1001231501 494
61 3300005335 Ga0070666_10049483 Ga0070666_100494831 494
62 3300005336 Ga0070680_100000159 Ga0070680_10000015936 494
63 3300005336 Ga0070680_100035514 Ga0070680_1000355141 494
64 3300005338 Ga0068868_100031725 Ga0068868_1000317253 494
65 3300005355 Ga0070671_100161190 Ga0070671_1001611901 494
66 3300005364 Ga0070673_100174157 Ga0070673_1001741571 494
67 3300005441 Ga0070700_100024166 Ga0070700_1000241662 494
68 3300005458 Ga0070681_10000078 Ga0070681_1000007813 494
69 3300005468 Ga0070707_100029790 Ga0070707_1000297903 494
70 3300005471 Ga0070698_100015751 Ga0070698_1000157512 494
71 3300005530 Ga0070679_100000047 Ga0070679_10000004737 494
72 3300005536 Ga0070697_100016244 Ga0070697_1000162444 494
73 3300005546 Ga0070696_100076793 Ga0070696_1000767932 494
74 3300005547 Ga0070693_100027504 Ga0070693_1000275042 494
75 3300005549 Ga0070704_100038121 Ga0070704_1000381212 494
76 3300005616 Ga0068852_100108476 Ga0068852_1001084761 494
77 3300005617 Ga0068859_100071724 Ga0068859_1000717242 494
78 3300005617 Ga0068859_100218781 Ga0068859_1002187811 494
79 3300005618 Ga0068864_100011609 Ga0068864_1000116092 494
80 3300005618 Ga0068864_100024634 Ga0068864_1000246343 494
81 3300005719 Ga0068861_100079551 Ga0068861_1000795512 494
82 3300005841 Ga0068863_100120701 Ga0068863_1001207012 494
83 3300005842 Ga0068858_100221334 Ga0068858_1002213341 494
84 3300005985 Ga0081539_10000422 Ga0081539_1000042257 494
85 3300006163 Ga0070715_10000020 Ga0070715_1000002078 494
86 3300006237 Ga0097621_100023163 Ga0097621_1000231633 494
87 3300006358 Ga0068871_100052306 Ga0068871_1000523062 494
88 3300006844 Ga0075428_100218624 Ga0075428_1002186241 494
89 3300006852 Ga0075433_10020978 Ga0075433_100209783 494
90 3300006852 Ga0075433_10061496 Ga0075433_100614962 494
91 3300006852 Ga0075433_10082554 Ga0075433_100825542 494
92 3300006871 Ga0075434_100028648 Ga0075434_1000286483 494
93 3300006871 Ga0075434_100033963 Ga0075434_1000339632 494
94 3300006931 Ga0097620_100071725 Ga0097620_1000717252 494
95 3300006931 Ga0097620_100218786 Ga0097620_1002187862 494
96 3300009094 Ga0111539_10063384 Ga0111539_100633842 494
97 3300009101 Ga0105247_10006019 Ga0105247_100060194 494
98 3300009147 Ga0114129_10090750 Ga0114129_100907502 494
99 3300009147 Ga0114129_10128166 Ga0114129_101281662 494
100 3300009177 Ga0105248_10032658 Ga0105248_100326585 494
101 3300009551 Ga0105238_10001253 Ga0105238_1000125323 494
102 3300009553 Ga0105249_10025276 Ga0105249_100252762 494
103 3300010375 Ga0105239_10057086 Ga0105239_100570862 494
104 3300010375 Ga0105239_10065259 Ga0105239_100652592 494
105 3300013297 Ga0157378_10008171 Ga0157378_100081713 494
106 3300013297 Ga0157378_10167235 Ga0157378_101672352 494
107 3300013306 Ga0163162_10034731 Ga0163162_100347311 494
108 3300013308 Ga0157375_10040520 Ga0157375_100405203 494
109 3300013308 Ga0157375_10083828 Ga0157375_100838282 494
110 3300013308 Ga0157375_10192828 Ga0157375_101928282 494
111 3300014325 Ga0163163_10001085 Ga0163163_1000108523 494
112 3300014325 Ga0163163_10006946 Ga0163163_100069467 494
113 3300014325 Ga0163163_10027906 Ga0163163_100279062 494
114 3300014326 Ga0157380_10140822 Ga0157380_101408221 494
115 3300014969 Ga0157376_10033317 Ga0157376_100333173 494
116 3300025900 Ga0207710_10003462 Ga0207710_100034624 494
117 3300025903 Ga0207680_10036677 Ga0207680_100366772 494
118 3300025905 Ga0207685_10000008 Ga0207685_10000008218 494
119 3300025910 Ga0207684_10006372 Ga0207684_100063721 494
120 3300025912 Ga0207707_10000006 Ga0207707_10000006277 494
121 3300025918 Ga0207662_10025191 Ga0207662_100251912 494
122 3300025918 Ga0207662_10064645 Ga0207662_100646451 494
123 3300025922 Ga0207646_10002258 Ga0207646_1000225816 494
124 3300025924 Ga0207694_10000938 Ga0207694_1000093820 494
125 3300025925 Ga0207650_10000047 Ga0207650_1000004777 494
126 3300025925 Ga0207650_10023005 Ga0207650_100230053 494
127 3300025931 Ga0207644_10014449 Ga0207644_100144494 494
128 3300025934 Ga0207686_10065096 Ga0207686_100650962 494
129 3300025942 Ga0207689_10012384 Ga0207689_100123844 494
130 3300025942 Ga0207689_10032003 Ga0207689_100320031 494
131 3300025960 Ga0207651_10134179 Ga0207651_101341791 494
132 3300026095 Ga0207676_10008551 Ga0207676_100085512 494
133 3300026095 Ga0207676_10041897 Ga0207676_100418973 494
134 3300026095 Ga0207676_10081880 Ga0207676_100818802 494
135 3300026116 Ga0207674_10074198 Ga0207674_100741982 494
136 3300035091 Ga0373951_0000456 Ga0373951_0000456_114_1652 494
137 3300048909 Ga0496106_0039951 Ga0496106_0039951_428_1966 494
138 3300048910 Ga0496107_0066122 Ga0496107_0066122_438_1976 494
139 3300049574 Ga0501038_0007240 Ga0501038_0007240_2323_3909 494
140 3300050511 nmdc:mga08y16_120823_c1 nmdc:mga08y16_120823_c1_1101_2669 494
141 3300050512 nmdc:mga0n895_22879_c1 nmdc:mga0n895_22879_c1_2612_4183 494
142 3300050515 nmdc:mga0a205_32561_c1 nmdc:mga0a205_32561_c1_3245_4816 494
143 3300050515 nmdc:mga0a205_66941_c1 nmdc:mga0a205_66941_c1_1166_2740 494
144 3300005340 Ga0070689_100001209 Ga0070689_1000012091 495
145 3300005355 Ga0070671_100003832 Ga0070671_10000383210 495
146 3300005440 Ga0070705_100006661 Ga0070705_1000066612 495
147 3300005441 Ga0070700_100000062 Ga0070700_10000006212 495
148 3300005444 Ga0070694_100000723 Ga0070694_10000072313 495
149 3300005445 Ga0070708_100001183 Ga0070708_10000118319 495
150 3300005467 Ga0070706_100000137 Ga0070706_1000001379 495
151 3300005467 Ga0070706_100162635 Ga0070706_1001626352 495
152 3300005468 Ga0070707_100000054 Ga0070707_10000005467 495
153 3300005468 Ga0070707_100087201 Ga0070707_1000872013 495
154 3300005471 Ga0070698_100016175 Ga0070698_1000161756 495
155 3300005518 Ga0070699_100002296 Ga0070699_1000022962 495
156 3300005518 Ga0070699_100005850 Ga0070699_1000058508 495
157 3300005536 Ga0070697_100019045 Ga0070697_1000190455 495
158 3300005547 Ga0070693_100001695 Ga0070693_1000016954 495
159 3300005547 Ga0070693_100004277 Ga0070693_1000042772 495
160 3300005549 Ga0070704_100003900 Ga0070704_1000039009 495
161 3300005549 Ga0070704_100033907 Ga0070704_1000339072 495
162 3300005617 Ga0068859_100012226 Ga0068859_1000122262 495
163 3300005617 Ga0068859_100088931 Ga0068859_1000889313 495
164 3300005618 Ga0068864_100039600 Ga0068864_1000396002 495
165 3300005618 Ga0068864_100050552 Ga0068864_1000505522 495
166 3300005834 Ga0068851_10018021 Ga0068851_100180212 495
167 3300005841 Ga0068863_100032855 Ga0068863_1000328554 495
168 3300005841 Ga0068863_100176804 Ga0068863_1001768042 495
169 3300005842 Ga0068858_100078504 Ga0068858_1000785042 495
170 3300006931 Ga0097620_100012226 Ga0097620_1000122268 495
171 3300006931 Ga0097620_100088926 Ga0097620_1000889261 495
172 3300009147 Ga0114129_10099991 Ga0114129_100999912 495
173 3300009148 Ga0105243_10000371 Ga0105243_1000037128 495
174 3300009176 Ga0105242_10000477 Ga0105242_1000047713 495
175 3300009176 Ga0105242_10059496 Ga0105242_100594962 495
176 3300009177 Ga0105248_10000861 Ga0105248_100008615 495
177 3300009177 Ga0105248_10016546 Ga0105248_100165462 495
178 3300009545 Ga0105237_10000903 Ga0105237_1000090330 495
179 3300013307 Ga0157372_10010237 Ga0157372_100102379 495
180 3300014745 Ga0157377_10034124 Ga0157377_100341242 495
181 3300014968 Ga0157379_10060639 Ga0157379_100606391 495
182 3300017792 Ga0163161_10022465 Ga0163161_100224652 495
183 3300025321 Ga0207656_10001007 Ga0207656_100010077 495
184 3300025885 Ga0207653_10001789 Ga0207653_100017892 495
185 3300025910 Ga0207684_10000314 Ga0207684_100003148 495
186 3300025910 Ga0207684_10020984 Ga0207684_100209845 495
187 3300025910 Ga0207684_10038022 Ga0207684_100380221 495
188 3300025913 Ga0207695_10008579 Ga0207695_100085791 495
189 3300025922 Ga0207646_10000225 Ga0207646_1000022525 495
190 3300025922 Ga0207646_10102500 Ga0207646_101025002 495
191 3300025934 Ga0207686_10000009 Ga0207686_10000009138 495
192 3300025934 Ga0207686_10013245 Ga0207686_100132453 495
193 3300025935 Ga0207709_10000048 Ga0207709_1000004862 495
194 3300025941 Ga0207711_10010047 Ga0207711_100100472 495
195 3300025941 Ga0207711_10057309 Ga0207711_100573093 495
196 3300026035 Ga0207703_10074309 Ga0207703_100743093 495
197 3300026075 Ga0207708_10000246 Ga0207708_1000024612 495
198 3300026088 Ga0207641_10168531 Ga0207641_101685311 495
199 3300026089 Ga0207648_10083057 Ga0207648_100830572 495
200 3300026095 Ga0207676_10015062 Ga0207676_100150622 495
201 3300027907 Ga0207428_10013838 Ga0207428_100138385 495
202 3300031548 Ga0307408_100031666 Ga0307408_1000316662 495
203 3300031824 Ga0307413_10022470 Ga0307413_100224702 495
204 3300031852 Ga0307410_10002233 Ga0307410_100022333 495
205 3300031911 Ga0307412_10022679 Ga0307412_100226792 495
206 3300031995 Ga0307409_100020229 Ga0307409_1000202292 495
207 3300032002 Ga0307416_100041994 Ga0307416_1000419942 495
208 3300032004 Ga0307414_10003167 Ga0307414_100031672 495
209 3300037418 Ga0395900_0162405 Ga0395900_0162405_687_2264 495
210 3300038443 Ga0395901_0210860 Ga0395901_0210860_423_2000 495
211 3300044673 Ga0453683_0026426 Ga0453683_0026426_2030_3607 495
212 3300046663 Ga0495635_0118579 Ga0495635_0118579_152_1729 495
213 3300046691 Ga0495670_0018490 Ga0495670_0018490_619_2196 495
214 3300049649 Ga0501198_000451 Ga0501198_000451_1115_2692 495
215 3300049654 Ga0501207_000536 Ga0501207_000536_2552_4129 495
216 3300049661 Ga0501217_006179 Ga0501217_006179_754_2295 495
217 3300049663 Ga0501223_000399 Ga0501223_000399_2913_4490 495
218 3300049669 Ga0501235_003331 Ga0501235_003331_245_1822 495
219 3300049679 Ga0501249_007349 Ga0501249_007349_682_2259 495
220 3300049705 Ga0501225_0003021 Ga0501225_0003021_1120_2697 495
221 3300049707 Ga0501234_001148 Ga0501234_001148_1358_2935 495
222 3300005471 Ga0070698_100104856 Ga0070698_1001048562 496
223 3300005614 Ga0068856_100019294 Ga0068856_1000192943 496
224 3300006173 Ga0070716_100000008 Ga0070716_10000000842 496
225 3300006914 Ga0075436_100000020 Ga0075436_10000002025 496
226 3300007076 Ga0075435_100000717 Ga0075435_1000007173 496
227 3300025934 Ga0207686_10000152 Ga0207686_1000015212 496
228 3300025939 Ga0207665_10000003 Ga0207665_10000003156 496
229 3300037471 Ga0395905_0180662 Ga0395905_0180662_171_1757 496
230 3300048905 Ga0496102_0026999 Ga0496102_0026999_2153_3730 496
231 3300048907 Ga0496104_0015282 Ga0496104_0015282_5195_6772 496
232 3300050513 nmdc:mga0rr50_98_c1 nmdc:mga0rr50_98_c1_29623_31203 496
233 3300050514 nmdc:mga08x19_3_c1 nmdc:mga08x19_3_c1_448546_450126 496
234 3300005293 Ga0065715_10151601 Ga0065715_101516011 497
235 3300005295 Ga0065707_10111342 Ga0065707_101113421 497
236 3300005345 Ga0070692_10029191 Ga0070692_100291911 497
237 3300005353 Ga0070669_100040922 Ga0070669_1000409222 497
238 3300005406 Ga0070703_10000060 Ga0070703_100000601 497
239 3300005459 Ga0068867_100059173 Ga0068867_1000591732 497
240 3300005467 Ga0070706_100187350 Ga0070706_1001873501 497
241 3300005471 Ga0070698_100000107 Ga0070698_10000010752 497
242 3300005471 Ga0070698_100031090 Ga0070698_1000310904 497
243 3300005518 Ga0070699_100057716 Ga0070699_1000577162 497
244 3300005536 Ga0070697_100058301 Ga0070697_1000583012 497
245 3300005545 Ga0070695_100017302 Ga0070695_1000173022 497
246 3300005617 Ga0068859_100036826 Ga0068859_1000368262 497
247 3300005844 Ga0068862_100167059 Ga0068862_1001670592 497
248 3300009094 Ga0111539_10240383 Ga0111539_102403832 497
249 3300009553 Ga0105249_10217139 Ga0105249_102171391 497
250 3300014326 Ga0157380_10019396 Ga0157380_100193964 497
251 3300025923 Ga0207681_10067416 Ga0207681_100674162 497
252 3300025941 Ga0207711_10077050 Ga0207711_100770502 497
253 3300026075 Ga0207708_10031230 Ga0207708_100312302 497
254 3300026118 Ga0207675_100098674 Ga0207675_1000986741 497
255 3300050511 nmdc:mga08y16_224340_c1 nmdc:mga08y16_224340_c1_184_1782 497
256 3300005468 Ga0070707_100090275 Ga0070707_1000902752 498
257 3300005530 Ga0070679_100176593 Ga0070679_1001765931 498
258 3300025922 Ga0207646_10099913 Ga0207646_100999132 498
259 3300005467 Ga0070706_100004019 Ga0070706_1000040192 499
260 3300025910 Ga0207684_10005631 Ga0207684_100056315 499
261 3300000532 CNAas_1001275 CNAas_10012752 501
262 3300005289 Ga0065704_10003844 Ga0065704_100038444 501
263 3300005293 Ga0065715_10089361 Ga0065715_100893618 501
264 3300005617 Ga0068859_100262540 Ga0068859_1002625401 501
265 3300005985 Ga0081539_10002204 Ga0081539_1000220413 501
266 3300006931 Ga0097620_100262532 Ga0097620_1002625321 501
267 3300011119 Ga0105246_10048312 Ga0105246_100483122 501
268 3300026075 Ga0207708_10054708 Ga0207708_100547082 501

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00171

Aldedh

Aldehyde dehydrogenase family

7

502

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jz4-assembly1.cif.gz_B crystal structure of e. coli nadp dependent enzyme 0.9508 1 442
3efv-assembly1.cif.gz_A crystal structure of a putative succinate-semialdehyde dehydrogenase from salmonella typhimurium lt2 with bound nad 0.9494 1 444
4it9-assembly1.cif.gz_B structure of bacterial enzyme 0.9481 1 440
3ek1-assembly2.cif.gz_G crystal structure of aldehyde dehydrogenase from brucella melitensis biovar abortus 2308 0.9479 1 443
5x5t-assembly1.cif.gz_A crystal structure of alpha-ketoglutarate semialdehyde dehydrogenase (kgsadh) from azospirillum brasilense 0.9472 4 444
ID Description Score Start End Superfamily
af_Q4DFG3_10_325_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9682 1 295 3.40.605.10
af_A4IDE7_286_468_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9675 220 402 3.40.309.10
af_Q4DFG3_12_248_3.40.605.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 1;Aldehyde Dehydrogenase; Chain A, domain 1 0.9672 1 219 3.40.605.10
af_P76149_240_424_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9659 220 401 3.40.309.10
af_P40047_292_478_3.40.309.10 Alpha Beta;3-Layer(aba) Sandwich;Aldehyde Dehydrogenase; Chain A, domain 2;Aldehyde Dehydrogenase; Chain A, domain 2 0.9645 218 402 3.40.309.10
ID Description Score Start End GO Terms
AF-A0A7W0GTM0-F1-model_v4 Aldehyde dehydrogenase family protein 0.9784 1 221 GO:0016491
AF-A0A2V7WNS8-F1-model_v4 Aldehyde dehydrogenase 0.9765 146 405 GO:0016620
AF-A0A1E1XVW8-F1-model_v4 Putative formyltetrahydrofolate dehydrogenase 0.9686 128 402 GO:0016620
AF-A0A2H9MU03-F1-model_v4 Succinate-semialdehyde dehydrogenase 0.9682 1 436 GO:0004030
GO:0004777
AF-A0A6N6WSA6-F1-model_v4 Aldehyde dehydrogenase family protein 0.9673 106 294 GO:0004030

Feature Viewer

pLDDT pTM Quality
88.24 0.88 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map