F375309

General Info

Members Datasets Scaffolds Average Seq Length
268 190 536 380

Family's Representative Sequence

Representative Sequence 3300005366|Ga0070659_100072302|Ga0070659_1000723023
Length 382
Sequence MKREIYDADHESFRDSVRTFLDREVKPGWDKYIEAKQFPREMWLAFGRQGLLGLEVPEHYGGSAAGDFRFNAVLCEELGRVSMSLGSCHGIHADIVAPYLVELTNEEQRERWLPGFVSGEILTAIAMTEPSGGSDLAALKSTAVRDGDDWILNGAKTFITNGYSADLVVVAARTDPEAKRGHGISLFGVEADLEGFSRGRKLDKVGQDESDTAELSFANVRVPGANVIGEVNQGFIDMMNWLPQERLSNAIGNIAQAAQILDETLDYVKERKAFGQPIGSFQHNKFLLAELVTKIEVTRGYLDNAVLAHTKRELSPIDAAKLKWWCADMQNEVLDACVQLYGGYGYMNEYRVARAWRDARVSKIWAGSNEIMKELIGRDLGL

Samples

Sample ID Description Type Environment
1 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003162 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003163 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
6 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
7 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
8 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
9 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300012491 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610 Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
64 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
82 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
98 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
99 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
100 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
101 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
102 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
103 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
104 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
105 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
106 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
109 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
110 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
111 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
112 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
113 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
117 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
118 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
119 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
122 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
123 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
132 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049684 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_B_3_control Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
156 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
163 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
164 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
165 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
168 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 2643221561 Nocardioides sp. Root151 Isolate Unclassified
172 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
173 2643221617 Nocardioides sp. Root79 Isolate Unclassified
174 2643221620 Nocardioides sp. Root240 Isolate Unclassified
175 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
176 2643221679 Angustibacter sp. Root456 Isolate Unclassified
177 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
178 2643221696 Nocardioides sp. Root140 Isolate Unclassified
179 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
180 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
181 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
182 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
183 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
184 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
185 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
186 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
187 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
188 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
189 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
190 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 89.18
Metatranscriptomes 2.99
Isolates 7.84

Biome Distribution

Category Percentage (%)
Aerial Root 0.37
Bulb 0
Endosphere 5.22
Nodule 0
Rhizoplane 5.97
Rhizosphere 81.72
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070659_100072302 3300005366 Bacteria 2744
2 JGI24737J22298_10005381 3300001990 Bacteria 4423
3 JGI24735J21928_10012913 3300002067 Bacteria 2636
4 Ga0006778J45830_1010490 3300003162 Bacteria 2316
5 Ga0006759J45824_1021744 3300003163 Bacteria 1984
6 Ga0006777J48905_1018241 3300003308 Bacteria 2059
7 Ga0007429J51699_1014170 3300003579 Bacteria 2181
8 Ga0032354_1008952 3300003693 Bacteria 2023
9 JGI25405J52794_10016039 3300003911 Bacteria 1476
10 Ga0070658_10172353 3300005327 Bacteria 1818
11 Ga0070683_100093583 3300005329 Bacteria 2824
12 Ga0068869_100284003 3300005334 Bacteria 1332
13 Ga0070682_100072079 3300005337 Bacteria 2213
14 Ga0070675_100227832 3300005354 Bacteria 1625
15 Ga0070674_100012826 3300005356 Bacteria 5159
16 Ga0070662_100016294 3300005457 Bacteria 4987
17 Ga0070662_100032972 3300005457 Bacteria 3644
18 Ga0068867_100260724 3300005459 Bacteria 1413
19 Ga0068853_100008074 3300005539 Bacteria 8442
20 Ga0068853_100148308 3300005539 Bacteria 2110
21 Ga0070696_100000848 3300005546 Bacteria 19720
22 Ga0070693_100153137 3300005547 Bacteria 1462
23 Ga0068859_100020801 3300005617 Bacteria 6586
24 Ga0068866_10055937 3300005718 Bacteria 2028
25 Ga0068861_100027107 3300005719 Bacteria 4171
26 Ga0068861_100150571 3300005719 Bacteria 1909
27 Ga0068862_100313699 3300005844 Bacteria 1446
28 Ga0081455_10003247 3300005937 Bacteria 18828
29 Ga0081455_10014528 3300005937 Bacteria 7710
30 Ga0081455_10015623 3300005937 Bacteria 7366
31 Ga0081455_10061343 3300005937 Bacteria 3165
32 Ga0081455_10064639 3300005937 Bacteria 3063
33 Ga0081455_10216401 3300005937 Bacteria 1424
34 Ga0081539_10010586 3300005985 Bacteria 7458
35 Ga0075365_10000217 3300006038 Bacteria 19371
36 Ga0075365_10018055 3300006038 Bacteria 4330
37 Ga0075365_10030037 3300006038 Bacteria 3478
38 Ga0075364_10020368 3300006051 Bacteria 4171
39 Ga0075432_10000024 3300006058 Bacteria 27500
40 Ga0070712_100123900 3300006175 Bacteria 1949
41 Ga0075362_10037741 3300006177 Bacteria 2120
42 Ga0075367_10000595 3300006178 Bacteria 13890
43 Ga0075370_10017554 3300006353 Bacteria 3868
44 Ga0075370_10079691 3300006353 Bacteria 1881
45 Ga0068871_100279728 3300006358 Bacteria 1459
46 Ga0075428_100001947 3300006844 Bacteria 22189
47 Ga0075428_100007417 3300006844 Bacteria 12154
48 Ga0075428_100018600 3300006844 Bacteria 7679
49 Ga0075430_100020108 3300006846 Bacteria 5681
50 Ga0075431_100005645 3300006847 Bacteria 12364
51 Ga0075431_100028029 3300006847 Bacteria 5781
52 Ga0075433_10022559 3300006852 Bacteria 5285
53 Ga0075434_100002411 3300006871 Bacteria 16416
54 Ga0075429_100031462 3300006880 Bacteria 4612
55 Ga0068865_100014871 3300006881 Bacteria 4952
56 Ga0068865_100022371 3300006881 Bacteria 4124
57 Ga0075436_100061496 3300006914 Bacteria 2594
58 Ga0097620_100020802 3300006931 Bacteria 6586
59 Ga0075435_100001204 3300007076 Bacteria 16549
60 Ga0111539_10011203 3300009094 Bacteria 11270
61 Ga0105245_10020510 3300009098 Bacteria 5796
62 Ga0105245_10074478 3300009098 Bacteria 3089
63 Ga0105247_10067263 3300009101 Bacteria 2232
64 Ga0114129_10002526 3300009147 Bacteria 25414
65 Ga0114129_10007531 3300009147 Bacteria 15510
66 Ga0105243_10013595 3300009148 Bacteria 6157
67 Ga0105243_10016317 3300009148 Bacteria 5619
68 Ga0105242_10001440 3300009176 Bacteria 18720
69 Ga0105242_10132040 3300009176 Bacteria 2157
70 Ga0105248_10183979 3300009177 Bacteria 2355
71 Ga0105237_10066683 3300009545 Bacteria 3594
72 Ga0105238_10134956 3300009551 Bacteria 2446
73 Ga0105238_10150262 3300009551 Bacteria 2305
74 Ga0105249_10118416 3300009553 Bacteria 2513
75 Ga0105249_10238124 3300009553 Bacteria 1798
76 Ga0105239_10120087 3300010375 Bacteria 2918
77 Ga0105239_10141696 3300010375 Bacteria 2679
78 Ga0105246_10052399 3300011119 Bacteria 2805
79 Ga0105246_10104335 3300011119 Bacteria 2070
80 Ga0157329_1000309 3300012491 Bacteria 1742
81 Ga0163162_10031748 3300013306 Bacteria 5241
82 Ga0163162_10035358 3300013306 Bacteria 4976
83 Ga0163162_10039553 3300013306 Bacteria 4713
84 Ga0163162_10092163 3300013306 Bacteria 3113
85 Ga0163162_10347308 3300013306 Bacteria 1616
86 Ga0157372_10054187 3300013307 Bacteria 4473
87 Ga0157380_10166199 3300014326 Bacteria 1923
88 Ga0157376_10504574 3300014969 Bacteria 1189
89 Ga0206353_10239114 3300020082 Bacteria 1216
90 Ga0154015_1010115 3300020610 Bacteria 1406
91 Ga0207642_10039017 3300025899 Bacteria 2060
92 Ga0207710_10040221 3300025900 Bacteria 2071
93 Ga0207688_10002796 3300025901 Bacteria 9476
94 Ga0207647_10011531 3300025904 Bacteria 6195
95 Ga0207647_10079364 3300025904 Bacteria 1971
96 Ga0207663_10004046 3300025916 Bacteria 7266
97 Ga0207687_10023488 3300025927 Bacteria 4111
98 Ga0207690_10089097 3300025932 Bacteria 2175
99 Ga0207706_10001031 3300025933 Bacteria 28325
100 Ga0207709_10020552 3300025935 Bacteria 3727
101 Ga0207709_10123443 3300025935 Bacteria 1752
102 Ga0207669_10190977 3300025937 Bacteria 1477
103 Ga0207704_10056690 3300025938 Bacteria 2402
104 Ga0207704_10087376 3300025938 Bacteria 2036
105 Ga0207689_10102185 3300025942 Bacteria 2355
106 Ga0207712_10065277 3300025961 Bacteria 2598
107 Ga0207712_10070379 3300025961 Bacteria 2513
108 Ga0207668_10185057 3300025972 Bacteria 1646
109 Ga0207702_10061283 3300026078 Bacteria 3209
110 Ga0207648_10031080 3300026089 Bacteria 4722
111 Ga0207648_10118669 3300026089 Bacteria 2325
112 Ga0207648_10147314 3300026089 Bacteria 2077
113 Ga0207675_100006723 3300026118 Bacteria 10873
114 Ga0207675_100041262 3300026118 Bacteria 4309
115 Ga0207675_100044073 3300026118 Bacteria 4167
116 Ga0207428_10001615 3300027907 Bacteria 23393
117 Ga0268266_10089256 3300028379 Bacteria 2699
118 Ga0316176_1150450 3300030732 Bacteria 5173
119 Ga0307408_100052351 3300031548 Bacteria 2944
120 Ga0307405_10008608 3300031731 Bacteria 5183
121 Ga0307405_10015710 3300031731 Bacteria 4107
122 Ga0307405_10041933 3300031731 Bacteria 2782
123 Ga0307405_10066378 3300031731 Bacteria 2300
124 Ga0307413_10000250 3300031824 Bacteria 16195
125 Ga0307410_10014270 3300031852 Bacteria 4669
126 Ga0307410_10027305 3300031852 Bacteria 3606
127 Ga0307406_10018640 3300031901 Bacteria 4058
128 Ga0307407_10004939 3300031903 Bacteria 5732
129 Ga0307407_10005331 3300031903 Bacteria 5569
130 Ga0307407_10060137 3300031903 Bacteria 2216
131 Ga0307407_10090192 3300031903 Bacteria 1877
132 Ga0307412_10088150 3300031911 Bacteria 2164
133 Ga0307409_100000248 3300031995 Bacteria 21707
134 Ga0307409_100045248 3300031995 Bacteria 3321
135 Ga0307416_100008534 3300032002 Bacteria 6622
136 Ga0307416_100009415 3300032002 Bacteria 6392
137 Ga0307414_10122580 3300032004 Bacteria 2001
138 Ga0307411_10066844 3300032005 Bacteria 2417
139 Ga0307415_100002061 3300032126 Bacteria 9930
140 Ga0307415_100004829 3300032126 Bacteria 7065
141 Ga0307415_100039351 3300032126 Bacteria 3124
142 Ga0316588_1019116 3300033528 Bacteria 1540
143 Ga0316574_0024983 3300035398 Bacteria 3582
144 Ga0395900_0036931 3300037418 Bacteria 5036
145 Ga0395898_0006017 3300037466 Bacteria 13029
146 Ga0395901_0021034 3300038443 Bacteria 6683
147 Ga0395901_0033011 3300038443 Bacteria 5341
148 Ga0451791_1891133 3300041451 Bacteria 3010
149 Ga0439448_0045881 3300042005 Bacteria 1423
150 Ga0439455_0010604 3300042012 Bacteria 2031
151 Ga0439463_011933 3300042016 Bacteria 2135
152 Ga0466969_0018908 3300044656 Bacteria 3587
153 Ga0466972_0030047 3300044658 Bacteria 2675
154 Ga0466965_0013413 3300044683 Bacteria 3867
155 Ga0466961_0021585 3300044693 Bacteria 4143
156 Ga0466961_0183482 3300044693 Bacteria 1298
157 Ga0466963_0005056 3300044694 Bacteria 7710
158 Ga0466963_0058392 3300044694 Bacteria 2572
159 Ga0466964_0034511 3300044706 Bacteria 2019
160 Ga0466971_0005004 3300044719 Bacteria 5735
161 Ga0466970_0055746 3300044765 Bacteria 2111
162 Ga0466957_0024511 3300044842 Bacteria 3570
163 Ga0466960_0009120 3300044901 Bacteria 4081
164 Ga0466960_0084304 3300044901 Bacteria 1608
165 Ga0466960_0105089 3300044901 Bacteria 1459
166 Ga0466959_0032761 3300045049 Bacteria 3846
167 Ga0466958_0002148 3300045836 Bacteria 9812
168 Ga0466967_0004153 3300045976 Bacteria 9690
169 Ga0466967_0132783 3300045976 Bacteria 2313
170 Ga0466967_0163873 3300045976 Bacteria 2088
171 Ga0495641_0027753 3300046461 Bacteria 2748
172 Ga0495584_0040627 3300046491 Bacteria 2349
173 Ga0495608_0083123 3300046511 Bacteria 2079
174 Ga0495616_0055933 3300046513 Bacteria 1951
175 Ga0495656_0062984 3300046615 Bacteria 1624
176 Ga0495581_0072152 3300047315 Bacteria 1998
177 Ga0496102_0036307 3300048905 Bacteria 4439
178 Ga0496102_0092254 3300048905 Bacteria 2804
179 Ga0496102_0147508 3300048905 Bacteria 2209
180 Ga0496104_0016251 3300048907 Bacteria 6756
181 Ga0496104_0263003 3300048907 Bacteria 1638
182 Ga0496105_0002380 3300048908 Bacteria 13627
183 Ga0496105_0038248 3300048908 Bacteria 3952
184 Ga0496106_0081898 3300048909 Bacteria 2480
185 Ga0496106_0102354 3300048909 Bacteria 2222
186 Ga0496107_0025363 3300048910 Bacteria 4197
187 Ga0496108_0374244 3300048911 Bacteria 1244
188 Ga0496109_0235196 3300048912 Bacteria 1724
189 Ga0496114_0000484 3300048917 Bacteria 29186
190 Ga0496114_0009105 3300048917 Bacteria 7870
191 Ga0496115_0120822 3300048918 Bacteria 2156
192 Ga0501031_0001660 3300049568 Bacteria 13964
193 Ga0501036_0002593 3300049572 Bacteria 14240
194 Ga0501036_0002847 3300049572 Bacteria 13715
195 Ga0501037_0035187 3300049573 Bacteria 3694
196 Ga0501038_0020014 3300049574 Bacteria 6024
197 Ga0501039_0022515 3300049575 Bacteria 4837
198 Ga0501039_0060141 3300049575 Bacteria 2942
199 Ga0501040_0002509 3300049576 Bacteria 11819
200 Ga0501040_0032428 3300049576 Bacteria 3534
201 Ga0501041_0000691 3300049577 Bacteria 17917
202 Ga0501041_0025235 3300049577 Bacteria 3573
203 Ga0501042_0015565 3300049578 Bacteria 5210
204 Ga0501042_0049220 3300049578 Bacteria 3006
205 Ga0501043_0013319 3300049579 Bacteria 6431
206 Ga0501043_0034249 3300049579 Bacteria 3995
207 Ga0501046_0112820 3300049580 Bacteria 2075
208 Ga0501048_0003282 3300049582 Bacteria 12329
209 Ga0501048_0018369 3300049582 Bacteria 5143
210 Ga0501068_0068544 3300049584 Bacteria 2162
211 Ga0501070_0051731 3300049586 Bacteria 3409
212 Ga0501070_0067113 3300049586 Bacteria 2971
213 Ga0501071_0007565 3300049587 Bacteria 7152
214 Ga0501071_0051053 3300049587 Bacteria 2979
215 Ga0501072_0117449 3300049588 Bacteria 2119
216 Ga0501074_0004468 3300049590 Bacteria 10010
217 Ga0501075_0003592 3300049591 Bacteria 10392
218 Ga0501075_0047776 3300049591 Bacteria 3216
219 Ga0501076_0005071 3300049592 Bacteria 9427
220 Ga0501076_0082652 3300049592 Bacteria 2578
221 Ga0501255_005473 3300049684 Bacteria 1270
222 Ga0501079_0021181 3300049741 Bacteria 4971
223 Ga0501079_0052639 3300049741 Bacteria 3142
224 Ga0501080_0045366 3300049742 Bacteria 4092
225 Ga0501080_0114127 3300049742 Bacteria 2504
226 Ga0501081_0002369 3300049743 Bacteria 11883
227 Ga0501083_0135038 3300049744 Bacteria 1616
228 Ga0501035_0038932 3300049822 Bacteria 4304
229 Ga0501035_0077420 3300049822 Bacteria 2939
230 Ga0501045_0003889 3300049824 Bacteria 10279
231 Ga0501045_0087368 3300049824 Bacteria 2302
232 nmdc:mga03683_37653_c1 3300050489 Bacteria 1972
233 nmdc:mga00v17_93555_c1 3300050491 Bacteria 1890
234 nmdc:mga0yw44_181940_c1 3300050492 Bacteria 1384
235 nmdc:mga0yw44_38456_c1 3300050492 Bacteria 1346
236 nmdc:mga0yw44_4633_c1 3300050492 Bacteria 6348
237 nmdc:mga05p37_133975_c1 3300050507 Bacteria 3040
238 nmdc:mga05p37_17026_c1 3300050507 Bacteria 8766
239 nmdc:mga09592_81049_c1 3300050508 Bacteria 2765
240 nmdc:mga06r32_15009_c1 3300050510 Bacteria 7031
241 nmdc:mga0n895_4229_c1 3300050512 Bacteria 11738
242 nmdc:mga0rr50_4947_c1 3300050513 Bacteria 7887
243 nmdc:mga0a205_4992_c1 3300050515 Bacteria 11941
244 Ga0495619_0120582 3300053085 Bacteria 1798
245 Ga0500573_0026916 3300053140 Bacteria 3305
246 Ga0501082_0038038 3300060353 Bacteria 4150
247 Ga0530510_0007171 3300061734 Bacteria 7758
248 2643826856 2643221561 Bacteria 4984412
249 2643853497 2643221567 Bacteria 4163945
250 2644099272 2643221617 Bacteria 5139111
251 2644116534 2643221620 Bacteria 5134593
252 2644137458 2643221624 Bacteria 4384879
253 2644446066 2643221679 Bacteria 3839507
254 2644458031 2643221681 Bacteria 3707866
255 2644533293 2643221696 Bacteria 5431823
256 2644534204 2643221696 Bacteria 5431823
257 2644536853 2643221697 Bacteria 3575694
258 2645722916 2643221961 Bacteria 3919167
259 2645723459 2643221962 Bacteria 3874254
260 2739204342 2738543005 Bacteria 5278128
261 2784471428 2784132109 Bacteria 3141763
262 2816424442 2816332119 Bacteria 8120218
263 2855390213 2855386786 Bacteria 4752232
264 2928145169 2928142448 Bacteria 5288925
265 2956942436 2956939328 Bacteria 3474458
266 2984594043 2984592036 Bacteria 3670284
267 3001891919 3001889506 Bacteria 2975194
268 8047718265 8047710418 Bacteria 11023148
269 Ga0070659_100072302
270 JGI24737J22298_10005381
271 JGI24735J21928_10012913
272 Ga0006778J45830_1010490
273 Ga0006759J45824_1021744
274 Ga0006777J48905_1018241
275 Ga0007429J51699_1014170
276 Ga0032354_1008952
277 JGI25405J52794_10016039
278 Ga0070658_10172353
279 Ga0070683_100093583
280 Ga0068869_100284003
281 Ga0070682_100072079
282 Ga0070675_100227832
283 Ga0070674_100012826
284 Ga0070662_100016294
285 Ga0070662_100032972
286 Ga0068867_100260724
287 Ga0068853_100008074
288 Ga0068853_100148308
289 Ga0070696_100000848
290 Ga0070693_100153137
291 Ga0068859_100020801
292 Ga0068866_10055937
293 Ga0068861_100027107
294 Ga0068861_100150571
295 Ga0068862_100313699
296 Ga0081455_10003247
297 Ga0081455_10014528
298 Ga0081455_10015623
299 Ga0081455_10061343
300 Ga0081455_10064639
301 Ga0081455_10216401
302 Ga0081539_10010586
303 Ga0075365_10000217
304 Ga0075365_10018055
305 Ga0075365_10030037
306 Ga0075364_10020368
307 Ga0075432_10000024
308 Ga0070712_100123900
309 Ga0075362_10037741
310 Ga0075367_10000595
311 Ga0075370_10017554
312 Ga0075370_10079691
313 Ga0068871_100279728
314 Ga0075428_100001947
315 Ga0075428_100007417
316 Ga0075428_100018600
317 Ga0075430_100020108
318 Ga0075431_100005645
319 Ga0075431_100028029
320 Ga0075433_10022559
321 Ga0075434_100002411
322 Ga0075429_100031462
323 Ga0068865_100014871
324 Ga0068865_100022371
325 Ga0075436_100061496
326 Ga0097620_100020802
327 Ga0075435_100001204
328 Ga0111539_10011203
329 Ga0105245_10020510
330 Ga0105245_10074478
331 Ga0105247_10067263
332 Ga0114129_10002526
333 Ga0114129_10007531
334 Ga0105243_10013595
335 Ga0105243_10016317
336 Ga0105242_10001440
337 Ga0105242_10132040
338 Ga0105248_10183979
339 Ga0105237_10066683
340 Ga0105238_10134956
341 Ga0105238_10150262
342 Ga0105249_10118416
343 Ga0105249_10238124
344 Ga0105239_10120087
345 Ga0105239_10141696
346 Ga0105246_10052399
347 Ga0105246_10104335
348 Ga0157329_1000309
349 Ga0163162_10031748
350 Ga0163162_10035358
351 Ga0163162_10039553
352 Ga0163162_10092163
353 Ga0163162_10347308
354 Ga0157372_10054187
355 Ga0157380_10166199
356 Ga0157376_10504574
357 Ga0206353_10239114
358 Ga0154015_1010115
359 Ga0207642_10039017
360 Ga0207710_10040221
361 Ga0207688_10002796
362 Ga0207647_10011531
363 Ga0207647_10079364
364 Ga0207663_10004046
365 Ga0207687_10023488
366 Ga0207690_10089097
367 Ga0207706_10001031
368 Ga0207709_10020552
369 Ga0207709_10123443
370 Ga0207669_10190977
371 Ga0207704_10056690
372 Ga0207704_10087376
373 Ga0207689_10102185
374 Ga0207712_10065277
375 Ga0207712_10070379
376 Ga0207668_10185057
377 Ga0207702_10061283
378 Ga0207648_10031080
379 Ga0207648_10118669
380 Ga0207648_10147314
381 Ga0207675_100006723
382 Ga0207675_100041262
383 Ga0207675_100044073
384 Ga0207428_10001615
385 Ga0268266_10089256
386 Ga0316176_1150450
387 Ga0307408_100052351
388 Ga0307405_10008608
389 Ga0307405_10015710
390 Ga0307405_10041933
391 Ga0307405_10066378
392 Ga0307413_10000250
393 Ga0307410_10014270
394 Ga0307410_10027305
395 Ga0307406_10018640
396 Ga0307407_10004939
397 Ga0307407_10005331
398 Ga0307407_10060137
399 Ga0307407_10090192
400 Ga0307412_10088150
401 Ga0307409_100000248
402 Ga0307409_100045248
403 Ga0307416_100008534
404 Ga0307416_100009415
405 Ga0307414_10122580
406 Ga0307411_10066844
407 Ga0307415_100002061
408 Ga0307415_100004829
409 Ga0307415_100039351
410 Ga0316588_1019116
411 Ga0316574_0024983
412 Ga0395900_0036931
413 Ga0395898_0006017
414 Ga0395901_0021034
415 Ga0395901_0033011
416 Ga0451791_1891133
417 Ga0439448_0045881
418 Ga0439455_0010604
419 Ga0439463_011933
420 Ga0466969_0018908
421 Ga0466972_0030047
422 Ga0466965_0013413
423 Ga0466961_0021585
424 Ga0466961_0183482
425 Ga0466963_0005056
426 Ga0466963_0058392
427 Ga0466964_0034511
428 Ga0466971_0005004
429 Ga0466970_0055746
430 Ga0466957_0024511
431 Ga0466960_0009120
432 Ga0466960_0084304
433 Ga0466960_0105089
434 Ga0466959_0032761
435 Ga0466958_0002148
436 Ga0466967_0004153
437 Ga0466967_0132783
438 Ga0466967_0163873
439 Ga0495641_0027753
440 Ga0495584_0040627
441 Ga0495608_0083123
442 Ga0495616_0055933
443 Ga0495656_0062984
444 Ga0495581_0072152
445 Ga0496102_0036307
446 Ga0496102_0092254
447 Ga0496102_0147508
448 Ga0496104_0016251
449 Ga0496104_0263003
450 Ga0496105_0002380
451 Ga0496105_0038248
452 Ga0496106_0081898
453 Ga0496106_0102354
454 Ga0496107_0025363
455 Ga0496108_0374244
456 Ga0496109_0235196
457 Ga0496114_0000484
458 Ga0496114_0009105
459 Ga0496115_0120822
460 Ga0501031_0001660
461 Ga0501036_0002593
462 Ga0501036_0002847
463 Ga0501037_0035187
464 Ga0501038_0020014
465 Ga0501039_0022515
466 Ga0501039_0060141
467 Ga0501040_0002509
468 Ga0501040_0032428
469 Ga0501041_0000691
470 Ga0501041_0025235
471 Ga0501042_0015565
472 Ga0501042_0049220
473 Ga0501043_0013319
474 Ga0501043_0034249
475 Ga0501046_0112820
476 Ga0501048_0003282
477 Ga0501048_0018369
478 Ga0501068_0068544
479 Ga0501070_0051731
480 Ga0501070_0067113
481 Ga0501071_0007565
482 Ga0501071_0051053
483 Ga0501072_0117449
484 Ga0501074_0004468
485 Ga0501075_0003592
486 Ga0501075_0047776
487 Ga0501076_0005071
488 Ga0501076_0082652
489 Ga0501255_005473
490 Ga0501079_0021181
491 Ga0501079_0052639
492 Ga0501080_0045366
493 Ga0501080_0114127
494 Ga0501081_0002369
495 Ga0501083_0135038
496 Ga0501035_0038932
497 Ga0501035_0077420
498 Ga0501045_0003889
499 Ga0501045_0087368
500 nmdc:mga03683_37653_c1
501 nmdc:mga00v17_93555_c1
502 nmdc:mga0yw44_181940_c1
503 nmdc:mga0yw44_38456_c1
504 nmdc:mga0yw44_4633_c1
505 nmdc:mga05p37_133975_c1
506 nmdc:mga05p37_17026_c1
507 nmdc:mga09592_81049_c1
508 nmdc:mga06r32_15009_c1
509 nmdc:mga0n895_4229_c1
510 nmdc:mga0rr50_4947_c1
511 nmdc:mga0a205_4992_c1
512 Ga0495619_0120582
513 Ga0500573_0026916
514 Ga0501082_0038038
515 Ga0530510_0007171
516 2643826856
517 2643853497
518 2644099272
519 2644116534
520 2644137458
521 2644446066
522 2644458031
523 2644533293
524 2644534204
525 2644536853
526 2645722916
527 2645723459
528 2739204342
529 2784471428
530 2816424442
531 2855390213
532 2928145169
533 2956942436
534 2984594043
535 3001891919
536 8047718265

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

232

381

0.99

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

7

120

0.98

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

124

220

0.93

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

248

370

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2pg0-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase from geobacillus kaustophilus 0.966 1 381
2pg0-assembly1.cif.gz_A crystal structure of acyl-coa dehydrogenase from geobacillus kaustophilus 0.9635 1 381
4kto-assembly1.cif.gz_D crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.9613 2 379
4kto-assembly1.cif.gz_C crystal structure of a putative isovaleryl-coa dehydrogenase (psi-nysgrc-012251) from sinorhizobium meliloti 1021 0.9597 2 380
2jif-assembly1.cif.gz_D structure of human short-branched chain acyl-coa dehydrogenase (acadsb) 0.9588 6 380
ID Description Score Start End Superfamily
6fahC02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9646 124 239 2.40.110.10
4n5fB02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9638 124 229 2.40.110.10
af_M0RAD8_170_241_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9632 122 189 2.40.110.10
af_Q9D7B6_155_263_2.40.110.10 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9615 125 233 2.40.110.10
2pg0A02 Mainly Beta;Beta Barrel;Butyryl-CoA Dehydrogenase, subunit A; domain 2;Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.9605 124 229 2.40.110.10
ID Description Score Start End GO Terms
AF-A0A402C4L9-F1-model_v4 Butyryl-CoA dehydrogenase 0.9863 1 381 GO:0003995
GO:0050660
AF-A0A0Q8X651-F1-model_v4 Acyl-CoA dehydrogenase 0.9862 1 381 GO:0003995
GO:0050660
AF-V7MQB5-F1-model_v4 deleted 0.9787 1 324
AF-A0A4V1VDG4-F1-model_v4 deleted 0.9763 1 176
AF-A0A1A3EK09-F1-model_v4 Acyl-[acyl-carrier-protein] dehydrogenase MbtN (Mycobactin synthase protein N) 0.9754 2 309 GO:0003995
GO:0005737
GO:0033539
GO:0050660

Map