F375277

General Info

Members Datasets Scaffolds Average Seq Length
268 153 268 681

Family's Representative Sequence

Representative Sequence 3300005331|Ga0070670_100000662|Ga0070670_10000066220
Length 699
Sequence MARLSRQTESQPDVSIRRTLFVAAFVAFWMLGISARLVYLQVSRHEKLSARAHQQQQDAIDISPARGAVLDREQRELARTIDTTSVFVAPDEFSGNKKDTPAQVTGVIECTARNLASILELDRKAVFDQINDARNSGRRFIWVARRIAPEKAQALETMNLAGVHTRKEPKRFYPNGSLAANVLGFVGLDGNGLAGIEQVYNEKITGEPGKVFIEKDSLGRAYESTEVPGRPGQTIVLTIDQSIQYQAEAALTAAIEESHAKAGTAIVMDPRTGEILALANAPTFDPNDVGAASPAARNNWALQNIYEPGSTFKIVAFSAAIEKGLAKPDDHIDCQMGSITVAKRVIHDHKPFGNLTLSEALAKSSNVAAIKLGLRVGDPTMYDYITRFGFGSRTGVELPGETAGVLRPVSRWQPSSIGSIAIGQEVGVTPLQMLGAFGALANDGVRIAPHLVREIRSASGVQTYRPNAEQRRVISQETARALRGMLEGVTLNGTAKKAQLDGYSAAGKTGTAQKIDAKTKTYSKTKFVASFVGFAPANNPAVDEPAGSYHGGDVAAPVFRQIAEQILPEMGVIPDTDFKGPDLIARAVETPAQIARQRDEQKRWENEARQDQARESTMPRVASSDNKGGEIVYAVADSNAILMPDLRGRSVRDAARACARLGMQVEARGEGGRVVGQSPEAGAQLRPGQVIYIDFGKLN

Samples

Sample ID Description Type Environment
1 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
2 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
35 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
36 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
37 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
38 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
39 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
43 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
44 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
51 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
52 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
58 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
59 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
60 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
69 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
80 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
81 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
123 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
124 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
125 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
126 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
127 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
130 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
131 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
135 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
136 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
143 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
144 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
145 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
146 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
147 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
148 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
151 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
152 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
153 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.75
Rhizosphere 98.88
Stem 0
Stem Tuber 0
Unclassified 0.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24748J21848_1000011 3300002074 Bacteria 157004
2 JGI24034J26672_10000037 3300002239 Bacteria 76023
3 JGI24751J29686_10000090 3300002459 Bacteria 50913
4 Ga0065714_10064436 3300005288 Bacteria 116206
5 Ga0065712_10000112 3300005290 Bacteria 340011
6 Ga0065712_10001121 3300005290 Bacteria 7117
7 Ga0065715_10004504 3300005293 Bacteria 4336
8 Ga0065715_10096342 3300005293 Unclassified 3899
9 Ga0065707_10002061 3300005295 Bacteria 5984
10 Ga0070670_100000662 3300005331 Bacteria 26796
11 Ga0070670_100054847 3300005331 Bacteria 3422
12 Ga0070670_100059379 3300005331 Unclassified 3283
13 Ga0068869_100077304 3300005334 Unclassified 2476
14 Ga0070682_100000056 3300005337 Bacteria 108991
15 Ga0070682_100003785 3300005337 Bacteria 8411
16 Ga0068868_100020709 3300005338 Bacteria 4947
17 Ga0070689_100002411 3300005340 Bacteria 12216
18 Ga0070689_100013528 3300005340 Bacteria 5909
19 Ga0070687_100003008 3300005343 Bacteria 6478
20 Ga0070687_100012987 3300005343 Unclassified 3697
21 Ga0070692_10008815 3300005345 Bacteria 4515
22 Ga0070668_100023396 3300005347 Bacteria 4672
23 Ga0070669_100003198 3300005353 Bacteria 11772
24 Ga0070669_100017669 3300005353 Bacteria 5088
25 Ga0070669_100031110 3300005353 Unclassified 3854
26 Ga0070673_100020195 3300005364 Bacteria 4800
27 Ga0070659_100003192 3300005366 Bacteria 11668
28 Ga0070703_10004182 3300005406 Bacteria 4065
29 Ga0070701_10022065 3300005438 Bacteria 3048
30 Ga0070705_100016665 3300005440 Unclassified 3821
31 Ga0070700_100000244 3300005441 Bacteria 29748
32 Ga0070700_100014577 3300005441 Bacteria 4440
33 Ga0070694_100012408 3300005444 Bacteria 5296
34 Ga0070694_100052817 3300005444 Bacteria 2748
35 Ga0070694_100057891 3300005444 Bacteria 2635
36 Ga0070708_100000621 3300005445 Bacteria 26821
37 Ga0070708_100011945 3300005445 Bacteria 7075
38 Ga0070681_10000914 3300005458 Bacteria 24939
39 Ga0070681_10004082 3300005458 Bacteria 13793
40 Ga0070681_10037746 3300005458 Bacteria 4845
41 Ga0068867_100008324 3300005459 Bacteria 7321
42 Ga0068867_100055454 3300005459 Bacteria 2931
43 Ga0070685_10010394 3300005466 Unclassified 4834
44 Ga0070706_100001332 3300005467 Bacteria 26269
45 Ga0070706_100001569 3300005467 Bacteria 23870
46 Ga0070706_100006914 3300005467 Bacteria 10710
47 Ga0070706_100087114 3300005467 Bacteria 2894
48 Ga0070707_100000659 3300005468 Bacteria 34403
49 Ga0070698_100000136 3300005471 Bacteria 65239
50 Ga0070698_100000852 3300005471 Bacteria 33433
51 Ga0070698_100004766 3300005471 Bacteria 14885
52 Ga0070698_100019573 3300005471 Bacteria 7102
53 Ga0070698_100019778 3300005471 Bacteria 7062
54 Ga0070698_100051800 3300005471 Bacteria 4179
55 Ga0070699_100003982 3300005518 Bacteria 13051
56 Ga0070699_100011877 3300005518 Bacteria 7517
57 Ga0070699_100025809 3300005518 Bacteria 5064
58 Ga0070699_100128729 3300005518 Bacteria 2231
59 Ga0070697_100000147 3300005536 Bacteria 57115
60 Ga0070697_100000204 3300005536 Bacteria 48652
61 Ga0070697_100007696 3300005536 Bacteria 8390
62 Ga0070697_100029478 3300005536 Bacteria 4400
63 Ga0068853_100017032 3300005539 Bacteria 5993
64 Ga0070672_100066783 3300005543 Bacteria 2848
65 Ga0070686_100017289 3300005544 Bacteria 4212
66 Ga0070686_100020486 3300005544 Bacteria 3913
67 Ga0070686_100037221 3300005544 Unclassified 3017
68 Ga0070695_100027533 3300005545 Bacteria 3521
69 Ga0070696_100022470 3300005546 Unclassified 4285
70 Ga0070696_100022826 3300005546 Bacteria 4254
71 Ga0070693_100018995 3300005547 Bacteria 3596
72 Ga0070693_100058867 3300005547 Bacteria 2225
73 Ga0070704_100001306 3300005549 Bacteria 13181
74 Ga0070704_100006970 3300005549 Bacteria 6703
75 Ga0070664_100000648 3300005564 Bacteria 26692
76 Ga0068857_100004381 3300005577 Bacteria 11932
77 Ga0068859_100017845 3300005617 Bacteria 7134
78 Ga0068859_100077043 3300005617 Bacteria 3375
79 Ga0068859_100093038 3300005617 Bacteria 3066
80 Ga0068859_100105821 3300005617 Bacteria 2873
81 Ga0068859_100117817 3300005617 Bacteria 2721
82 Ga0068864_100003296 3300005618 Bacteria 13339
83 Ga0068864_100003312 3300005618 Bacteria 13309
84 Ga0068864_100003575 3300005618 Bacteria 12847
85 Ga0068864_100030974 3300005618 Unclassified 4536
86 Ga0068864_100040336 3300005618 Bacteria 3994
87 Ga0068866_10007340 3300005718 Bacteria 4616
88 Ga0068866_10007845 3300005718 Bacteria 4480
89 Ga0068851_10015361 3300005834 Bacteria 3647
90 Ga0068863_100020227 3300005841 Bacteria 6367
91 Ga0068858_100000052 3300005842 Bacteria 119935
92 Ga0068858_100012333 3300005842 Bacteria 8058
93 Ga0068860_100080662 3300005843 Bacteria 3094
94 Ga0068862_100010132 3300005844 Bacteria 7780
95 Ga0068862_100045601 3300005844 Bacteria 3741
96 Ga0081539_10000491 3300005985 Bacteria 83392
97 Ga0070715_10000039 3300006163 Bacteria 66918
98 Ga0070716_100000014 3300006173 Bacteria 92762
99 Ga0097621_100008451 3300006237 Bacteria 7416
100 Ga0097621_100023189 3300006237 Bacteria 4828
101 Ga0068871_100050806 3300006358 Unclassified 3355
102 Ga0075428_100091804 3300006844 Bacteria 3311
103 Ga0075431_100018856 3300006847 Bacteria 7028
104 Ga0075433_10020873 3300006852 Bacteria 5483
105 Ga0075433_10021825 3300006852 Bacteria 5371
106 Ga0075433_10037037 3300006852 Bacteria 4205
107 Ga0075433_10051962 3300006852 Bacteria 3570
108 Ga0075433_10079695 3300006852 Bacteria 2886
109 Ga0075434_100029476 3300006871 Bacteria 5401
110 Ga0075434_100032094 3300006871 Bacteria 5178
111 Ga0075434_100094189 3300006871 Bacteria 2999
112 Ga0068865_100005084 3300006881 Bacteria 7963
113 Ga0075436_100000052 3300006914 Bacteria 70308
114 Ga0097620_100017845 3300006931 Bacteria 7134
115 Ga0097620_100077034 3300006931 Bacteria 3375
116 Ga0097620_100093041 3300006931 Bacteria 3066
117 Ga0097620_100105820 3300006931 Bacteria 2873
118 Ga0097620_100117816 3300006931 Bacteria 2721
119 Ga0075435_100026463 3300007076 Bacteria 4526
120 Ga0105240_10045469 3300009093 Bacteria 5569
121 Ga0111539_10058781 3300009094 Bacteria 4560
122 Ga0105247_10000003 3300009101 Bacteria 694517
123 Ga0105247_10026119 3300009101 Unclassified 3525
124 Ga0114129_10010262 3300009147 Bacteria 13364
125 Ga0114129_10032240 3300009147 Bacteria 7405
126 Ga0114129_10056492 3300009147 Bacteria 5497
127 Ga0114129_10056717 3300009147 Bacteria 5485
128 Ga0114129_10056730 3300009147 Bacteria 5484
129 Ga0105243_10001156 3300009148 Bacteria 23918
130 Ga0105241_10050103 3300009174 Bacteria 3182
131 Ga0105242_10004814 3300009176 Bacteria 10446
132 Ga0105242_10006156 3300009176 Bacteria 9241
133 Ga0105248_10012466 3300009177 Bacteria 9375
134 Ga0105248_10012753 3300009177 Bacteria 9272
135 Ga0105248_10029099 3300009177 Bacteria 6159
136 Ga0105237_10000403 3300009545 Bacteria 61490
137 Ga0105238_10004954 3300009551 Bacteria 13170
138 Ga0105249_10000118 3300009553 Bacteria 107887
139 Ga0105249_10017124 3300009553 Bacteria 6432
140 Ga0157373_10028051 3300013100 Bacteria 4062
141 Ga0157378_10000306 3300013297 Bacteria 47715
142 Ga0157378_10003138 3300013297 Bacteria 14688
143 Ga0157378_10052462 3300013297 Unclassified 3628
144 Ga0157378_10059528 3300013297 Bacteria 3408
145 Ga0157378_10117235 3300013297 Bacteria 2449
146 Ga0163162_10000059 3300013306 Bacteria 107864
147 Ga0163162_10012467 3300013306 Bacteria 8306
148 Ga0163162_10022007 3300013306 Bacteria 6281
149 Ga0163162_10032409 3300013306 Bacteria 5191
150 Ga0157372_10014854 3300013307 Bacteria 8338
151 Ga0157375_10020879 3300013308 Bacteria 5994
152 Ga0157375_10048979 3300013308 Bacteria 4137
153 Ga0157375_10091111 3300013308 Bacteria 3109
154 Ga0163163_10003070 3300014325 Bacteria 14133
155 Ga0163163_10005004 3300014325 Bacteria 11421
156 Ga0163163_10006153 3300014325 Bacteria 10460
157 Ga0163163_10052671 3300014325 Bacteria 4016
158 Ga0163163_10086085 3300014325 Bacteria 3151
159 Ga0157380_10000420 3300014326 Bacteria 25762
160 Ga0157380_10001541 3300014326 Bacteria 15135
161 Ga0157380_10066682 3300014326 Unclassified 2895
162 Ga0157377_10021654 3300014745 Unclassified 3384
163 Ga0157376_10005544 3300014969 Bacteria 8822
164 Ga0157376_10061920 3300014969 Bacteria 3147
165 Ga0207672_1000060 3300025223 Bacteria 14472
166 Ga0207656_10010277 3300025321 Bacteria 3501
167 Ga0207653_10000205 3300025885 Bacteria 40042
168 Ga0207710_10000001 3300025900 Bacteria 1797433
169 Ga0207685_10000024 3300025905 Bacteria 113741
170 Ga0207643_10007669 3300025908 Bacteria 5796
171 Ga0207643_10008932 3300025908 Bacteria 5382
172 Ga0207643_10027623 3300025908 Bacteria 3147
173 Ga0207684_10001397 3300025910 Bacteria 26248
174 Ga0207684_10002329 3300025910 Bacteria 19247
175 Ga0207684_10016813 3300025910 Bacteria 6280
176 Ga0207707_10018053 3300025912 Bacteria 6146
177 Ga0207695_10109600 3300025913 Bacteria 2742
178 Ga0207671_10011916 3300025914 Bacteria 7031
179 Ga0207662_10017781 3300025918 Unclassified 4025
180 Ga0207646_10000702 3300025922 Bacteria 43444
181 Ga0207646_10028751 3300025922 Bacteria 5057
182 Ga0207646_10068784 3300025922 Unclassified 3162
183 Ga0207681_10003824 3300025923 Bacteria 9336
184 Ga0207681_10006122 3300025923 Bacteria 7380
185 Ga0207694_10004599 3300025924 Bacteria 10743
186 Ga0207650_10000001 3300025925 Bacteria 1545726
187 Ga0207650_10000611 3300025925 Bacteria 28528
188 Ga0207650_10037595 3300025925 Bacteria 3529
189 Ga0207687_10013080 3300025927 Bacteria 5423
190 Ga0207644_10000341 3300025931 Bacteria 30275
191 Ga0207686_10004249 3300025934 Bacteria 7678
192 Ga0207686_10012907 3300025934 Bacteria 4607
193 Ga0207709_10001548 3300025935 Bacteria 15803
194 Ga0207670_10001949 3300025936 Bacteria 10817
195 Ga0207670_10058798 3300025936 Bacteria 2612
196 Ga0207665_10000029 3300025939 Bacteria 95174
197 Ga0207665_10038756 3300025939 Unclassified 3175
198 Ga0207691_10000304 3300025940 Bacteria 48837
199 Ga0207711_10006063 3300025941 Bacteria 10215
200 Ga0207711_10019680 3300025941 Bacteria 5620
201 Ga0207711_10020931 3300025941 Bacteria 5461
202 Ga0207711_10033026 3300025941 Unclassified 4377
203 Ga0207689_10005435 3300025942 Bacteria 11402
204 Ga0207689_10005674 3300025942 Bacteria 11106
205 Ga0207689_10024969 3300025942 Bacteria 5009
206 Ga0207689_10083409 3300025942 Bacteria 2628
207 Ga0207679_10003879 3300025945 Bacteria 9273
208 Ga0207651_10016036 3300025960 Bacteria 4375
209 Ga0207651_10019343 3300025960 Bacteria 4078
210 Ga0207651_10061818 3300025960 Bacteria 2607
211 Ga0207712_10000106 3300025961 Bacteria 94950
212 Ga0207712_10027713 3300025961 Bacteria 3785
213 Ga0207668_10029495 3300025972 Bacteria 3596
214 Ga0207640_10010496 3300025981 Bacteria 5218
215 Ga0207658_10028725 3300025986 Unclassified 3921
216 Ga0207677_10001502 3300026023 Bacteria 12319
217 Ga0207703_10000055 3300026035 Bacteria 143420
218 Ga0207708_10001792 3300026075 Bacteria 15837
219 Ga0207708_10004179 3300026075 Bacteria 10614
220 Ga0207708_10009780 3300026075 Bacteria 7115
221 Ga0207708_10046092 3300026075 Bacteria 3321
222 Ga0207708_10070409 3300026075 Bacteria 2678
223 Ga0207648_10017232 3300026089 Bacteria 6581
224 Ga0207648_10049493 3300026089 Bacteria 3677
225 Ga0207676_10002231 3300026095 Bacteria 13921
226 Ga0207676_10006390 3300026095 Bacteria 8325
227 Ga0207674_10000216 3300026116 Bacteria 71622
228 Ga0207675_100003050 3300026118 Bacteria 16429
229 Ga0207675_100003834 3300026118 Bacteria 14626
230 Ga0207675_100017045 3300026118 Bacteria 6788
231 Ga0207683_10053767 3300026121 Bacteria 3531
232 Ga0268264_10074859 3300028381 Bacteria 2877
233 Ga0307408_100063924 3300031548 Bacteria 2694
234 Ga0307413_10006965 3300031824 Bacteria 5208
235 Ga0307410_10016031 3300031852 Unclassified 4457
236 Ga0307406_10004002 3300031901 Bacteria 8013
237 Ga0307412_10012202 3300031911 Bacteria 4997
238 Ga0307416_100012290 3300032002 Bacteria 5760
239 Ga0307414_10001942 3300032004 Bacteria 10694
240 Ga0307415_100100463 3300032126 Unclassified 2120
241 Ga0373951_0004173 3300035091 Bacteria 3449
242 Ga0395900_0031758 3300037418 Bacteria 5428
243 Ga0395901_0192145 3300038443 Bacteria 2141
244 Ga0436365_0703466 3300039437 Bacteria 6332
245 Ga0495663_0000912 3300046525 Bacteria 9873
246 Ga0495598_0002418 3300046537 Bacteria 3853
247 Ga0495621_0005762 3300046539 Bacteria 3580
248 Ga0495668_0024178 3300046616 Bacteria 3457
249 Ga0495659_0003898 3300046664 Bacteria 4730
250 Ga0496106_0001691 3300048909 Bacteria 16493
251 Ga0496112_0114843 3300048915 Bacteria 2663
252 Ga0501038_0037573 3300049574 Bacteria 4245
253 Ga0501202_001385 3300049652 Bacteria 3880
254 Ga0501216_002127 3300049660 Unclassified 2781
255 Ga0501217_000189 3300049661 Bacteria 9188
256 Ga0501223_001612 3300049663 Bacteria 5190
257 Ga0501235_002777 3300049669 Bacteria 3769
258 Ga0501225_0000472 3300049705 Bacteria 12597
259 Ga0501226_000915 3300049853 Bacteria 3931
260 nmdc:mga05p37_16555_c1 3300050507 Bacteria 8881
261 nmdc:mga05p37_30803_c2 3300050507 Bacteria 5616
262 nmdc:mga08y16_10339_c1 3300050511 Bacteria 9794
263 nmdc:mga08y16_64568_c1 3300050511 Bacteria 3823
264 nmdc:mga0n895_103101_c1 3300050512 Bacteria 2864
265 nmdc:mga0n895_36116_c1 3300050512 Unclassified 4770
266 nmdc:mga08x19_106_c1 3300050514 Bacteria 74458
267 nmdc:mga0a205_37833_c1 3300050515 Bacteria 4640
268 nmdc:mga0a205_58427_c1 3300050515 Unclassified 3725

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0192145 Ga0395901_0192145_220_2043 568
2 3300026075 Ga0207708_10070409 Ga0207708_100704092 597
3 3300025908 Ga0207643_10008932 Ga0207643_100089321 631
4 3300049669 Ga0501235_002777 Ga0501235_002777_1128_3107 635
5 3300005467 Ga0070706_100001332 Ga0070706_10000133214 636
6 3300014745 Ga0157377_10021654 Ga0157377_100216542 636
7 3300025910 Ga0207684_10001397 Ga0207684_1000139717 636
8 3300049652 Ga0501202_001385 Ga0501202_001385_367_2349 636
9 3300005438 Ga0070701_10022065 Ga0070701_100220652 637
10 3300005544 Ga0070686_100020486 Ga0070686_1000204863 637
11 3300005618 Ga0068864_100040336 Ga0068864_1000403362 637
12 3300025972 Ga0207668_10029495 Ga0207668_100294952 639
13 3300050512 nmdc:mga0n895_36116_c1 nmdc:mga0n895_36116_c1_1818_3797 642
14 3300025942 Ga0207689_10083409 Ga0207689_100834091 643
15 3300006852 Ga0075433_10020873 Ga0075433_100208733 645
16 3300014326 Ga0157380_10066682 Ga0157380_100666822 645
17 3300025942 Ga0207689_10024969 Ga0207689_100249691 645
18 3300026075 Ga0207708_10009780 Ga0207708_100097804 645
19 3300037418 Ga0395900_0031758 Ga0395900_0031758_3233_5224 645
20 3300005293 Ga0065715_10004504 Ga0065715_100045043 647
21 3300006852 Ga0075433_10037037 Ga0075433_100370372 647
22 3300005539 Ga0068853_100017032 Ga0068853_1000170324 649
23 3300025939 Ga0207665_10038756 Ga0207665_100387563 649
24 3300005445 Ga0070708_100000621 Ga0070708_10000062128 650
25 3300005467 Ga0070706_100001569 Ga0070706_10000156915 650
26 3300005471 Ga0070698_100000852 Ga0070698_10000085226 650
27 3300005518 Ga0070699_100003982 Ga0070699_1000039824 651
28 3300005536 Ga0070697_100029478 Ga0070697_1000294784 651
29 3300005617 Ga0068859_100017845 Ga0068859_1000178454 651
30 3300006931 Ga0097620_100017845 Ga0097620_1000178455 651
31 3300025910 Ga0207684_10002329 Ga0207684_1000232918 651
32 3300046525 Ga0495663_0000912 Ga0495663_0000912_1531_3648 651
33 3300046539 Ga0495621_0005762 Ga0495621_0005762_1445_3562 651
34 3300046537 Ga0495598_0002418 Ga0495598_0002418_1054_3171 652
35 3300005337 Ga0070682_100000056 Ga0070682_10000005637 654
36 3300005618 Ga0068864_100030974 Ga0068864_1000309743 654
37 3300026095 Ga0207676_10006390 Ga0207676_100063905 654
38 3300028381 Ga0268264_10074859 Ga0268264_100748591 654
39 3300046616 Ga0495668_0024178 Ga0495668_0024178_675_2792 654
40 3300005340 Ga0070689_100002411 Ga0070689_1000024115 655
41 3300005458 Ga0070681_10004082 Ga0070681_100040823 655
42 3300005547 Ga0070693_100058867 Ga0070693_1000588671 655
43 3300025936 Ga0207670_10001949 Ga0207670_100019494 655
44 3300005471 Ga0070698_100004766 Ga0070698_10000476611 658
45 3300005471 Ga0070698_100019573 Ga0070698_1000195733 658
46 3300005518 Ga0070699_100025809 Ga0070699_1000258094 658
47 3300005536 Ga0070697_100000204 Ga0070697_10000020443 658
48 3300005546 Ga0070696_100022470 Ga0070696_1000224702 658
49 3300025922 Ga0207646_10068784 Ga0207646_100687842 658
50 3300005440 Ga0070705_100016665 Ga0070705_1000166653 659
51 3300014325 Ga0163163_10052671 Ga0163163_100526713 659
52 3300046664 Ga0495659_0003898 Ga0495659_0003898_55_2055 659
53 3300005445 Ga0070708_100011945 Ga0070708_1000119454 660
54 3300005471 Ga0070698_100000136 Ga0070698_1000001368 660
55 3300005618 Ga0068864_100003296 Ga0068864_10000329618 660
56 3300049574 Ga0501038_0037573 Ga0501038_0037573_64_2121 660
57 3300013297 Ga0157378_10052462 Ga0157378_100524622 661
58 3300050512 nmdc:mga0n895_103101_c1 nmdc:mga0n895_103101_c1_546_2531 661
59 3300050515 nmdc:mga0a205_37833_c1 nmdc:mga0a205_37833_c1_2230_4215 661
60 3300007076 Ga0075435_100026463 Ga0075435_1000264632 662
61 3300005471 Ga0070698_100051800 Ga0070698_1000518001 663
62 3300005536 Ga0070697_100000147 Ga0070697_10000014749 663
63 3300005546 Ga0070696_100022826 Ga0070696_1000228261 663
64 3300006852 Ga0075433_10021825 Ga0075433_100218254 663
65 3300013306 Ga0163162_10012467 Ga0163162_100124675 663
66 3300014325 Ga0163163_10006153 Ga0163163_100061535 663
67 3300025910 Ga0207684_10016813 Ga0207684_100168135 663
68 3300025922 Ga0207646_10028751 Ga0207646_100287511 663
69 3300009101 Ga0105247_10026119 Ga0105247_100261193 664
70 3300009147 Ga0114129_10056717 Ga0114129_100567174 664
71 3300002459 JGI24751J29686_10000090 JGI24751J29686_100000905 666
72 3300005331 Ga0070670_100059379 Ga0070670_1000593793 666
73 3300006358 Ga0068871_100050806 Ga0068871_1000508062 666
74 3300014325 Ga0163163_10086085 Ga0163163_100860853 666
75 3300025925 Ga0207650_10000001 Ga0207650_100000011183 666
76 3300032126 Ga0307415_100100463 Ga0307415_1001004631 666
77 3300005331 Ga0070670_100054847 Ga0070670_1000548472 667
78 3300005347 Ga0070668_100023396 Ga0070668_1000233963 667
79 3300005467 Ga0070706_100087114 Ga0070706_1000871141 667
80 3300009551 Ga0105238_10004954 Ga0105238_100049548 667
81 3300009553 Ga0105249_10000118 Ga0105249_1000011888 667
82 3300013306 Ga0163162_10000059 Ga0163162_1000005922 667
83 3300014326 Ga0157380_10000420 Ga0157380_1000042020 667
84 3300025924 Ga0207694_10004599 Ga0207694_100045997 667
85 3300025925 Ga0207650_10037595 Ga0207650_100375952 667
86 3300025961 Ga0207712_10000106 Ga0207712_1000010656 667
87 3300026075 Ga0207708_10046092 Ga0207708_100460922 667
88 3300026118 Ga0207675_100003834 Ga0207675_10000383410 667
89 3300009094 Ga0111539_10058781 Ga0111539_100587813 668
90 3300050511 nmdc:mga08y16_64568_c1 nmdc:mga08y16_64568_c1_626_2698 668
91 3300005718 Ga0068866_10007340 Ga0068866_100073402 669
92 3300013297 Ga0157378_10117235 Ga0157378_101172351 669
93 3300005331 Ga0070670_100000662 Ga0070670_10000066220 670
94 3300005340 Ga0070689_100013528 Ga0070689_1000135282 670
95 3300005353 Ga0070669_100017669 Ga0070669_1000176695 670
96 3300005985 Ga0081539_10000491 Ga0081539_100004914 670
97 3300025923 Ga0207681_10003824 Ga0207681_100038245 670
98 3300025925 Ga0207650_10000611 Ga0207650_100006111 670
99 3300025936 Ga0207670_10058798 Ga0207670_100587982 670
100 3300006871 Ga0075434_100094189 Ga0075434_1000941891 671
101 3300005295 Ga0065707_10002061 Ga0065707_100020616 672
102 3300005458 Ga0070681_10037746 Ga0070681_100377463 672
103 3300006871 Ga0075434_100032094 Ga0075434_1000320944 672
104 3300005547 Ga0070693_100018995 Ga0070693_1000189953 673
105 3300050511 nmdc:mga08y16_10339_c1 nmdc:mga08y16_10339_c1_5884_7956 673
106 3300005364 Ga0070673_100020195 Ga0070673_1000201953 674
107 3300025960 Ga0207651_10019343 Ga0207651_100193434 674
108 3300006847 Ga0075431_100018856 Ga0075431_1000188563 675
109 3300009177 Ga0105248_10012466 Ga0105248_100124663 675
110 3300005545 Ga0070695_100027533 Ga0070695_1000275333 676
111 3300009177 Ga0105248_10029099 Ga0105248_100290993 676
112 3300025908 Ga0207643_10027623 Ga0207643_100276233 676
113 3300025941 Ga0207711_10020931 Ga0207711_100209314 676
114 3300050515 nmdc:mga0a205_58427_c1 nmdc:mga0a205_58427_c1_260_2326 676
115 3300009174 Ga0105241_10050103 Ga0105241_100501033 677
116 3300005288 Ga0065714_10064436 Ga0065714_1006443680 678
117 3300005290 Ga0065712_10000112 Ga0065712_10000112273 678
118 3300005290 Ga0065712_10001121 Ga0065712_100011214 678
119 3300005293 Ga0065715_10096342 Ga0065715_100963423 678
120 3300005337 Ga0070682_100003785 Ga0070682_1000037852 678
121 3300005338 Ga0068868_100020709 Ga0068868_1000207094 678
122 3300005343 Ga0070687_100003008 Ga0070687_1000030085 678
123 3300005343 Ga0070687_100012987 Ga0070687_1000129873 678
124 3300005345 Ga0070692_10008815 Ga0070692_100088153 678
125 3300005353 Ga0070669_100003198 Ga0070669_1000031987 678
126 3300005353 Ga0070669_100031110 Ga0070669_1000311102 678
127 3300005366 Ga0070659_100003192 Ga0070659_1000031926 678
128 3300005406 Ga0070703_10004182 Ga0070703_100041822 678
129 3300005441 Ga0070700_100000244 Ga0070700_10000024426 678
130 3300005444 Ga0070694_100012408 Ga0070694_1000124083 678
131 3300005444 Ga0070694_100052817 Ga0070694_1000528171 678
132 3300005444 Ga0070694_100057891 Ga0070694_1000578912 678
133 3300005458 Ga0070681_10000914 Ga0070681_100009143 678
134 3300005459 Ga0068867_100008324 Ga0068867_1000083243 678
135 3300005459 Ga0068867_100055454 Ga0068867_1000554543 678
136 3300005466 Ga0070685_10010394 Ga0070685_100103942 678
137 3300005471 Ga0070698_100019778 Ga0070698_1000197785 678
138 3300005518 Ga0070699_100011877 Ga0070699_1000118775 678
139 3300005543 Ga0070672_100066783 Ga0070672_1000667832 678
140 3300005544 Ga0070686_100017289 Ga0070686_1000172893 678
141 3300005549 Ga0070704_100006970 Ga0070704_1000069703 678
142 3300005564 Ga0070664_100000648 Ga0070664_1000006488 678
143 3300005577 Ga0068857_100004381 Ga0068857_1000043815 678
144 3300005617 Ga0068859_100077043 Ga0068859_1000770433 678
145 3300005617 Ga0068859_100093038 Ga0068859_1000930383 678
146 3300005617 Ga0068859_100117817 Ga0068859_1001178171 678
147 3300005618 Ga0068864_100003312 Ga0068864_1000033122 678
148 3300005618 Ga0068864_100003575 Ga0068864_1000035758 678
149 3300005718 Ga0068866_10007845 Ga0068866_100078453 678
150 3300005834 Ga0068851_10015361 Ga0068851_100153613 678
151 3300005841 Ga0068863_100020227 Ga0068863_1000202275 678
152 3300005842 Ga0068858_100012333 Ga0068858_1000123333 678
153 3300005843 Ga0068860_100080662 Ga0068860_1000806622 678
154 3300005844 Ga0068862_100010132 Ga0068862_1000101323 678
155 3300005844 Ga0068862_100045601 Ga0068862_1000456014 678
156 3300006237 Ga0097621_100008451 Ga0097621_1000084516 678
157 3300006237 Ga0097621_100023189 Ga0097621_1000231893 678
158 3300006844 Ga0075428_100091804 Ga0075428_1000918043 678
159 3300006881 Ga0068865_100005084 Ga0068865_1000050843 678
160 3300006931 Ga0097620_100077034 Ga0097620_1000770343 678
161 3300006931 Ga0097620_100093041 Ga0097620_1000930413 678
162 3300006931 Ga0097620_100117816 Ga0097620_1001178161 678
163 3300009093 Ga0105240_10045469 Ga0105240_100454693 678
164 3300009147 Ga0114129_10010262 Ga0114129_100102628 678
165 3300009147 Ga0114129_10056730 Ga0114129_100567303 678
166 3300009176 Ga0105242_10006156 Ga0105242_100061567 678
167 3300009177 Ga0105248_10012753 Ga0105248_100127537 678
168 3300009545 Ga0105237_10000403 Ga0105237_1000040328 678
169 3300009553 Ga0105249_10017124 Ga0105249_100171244 678
170 3300013100 Ga0157373_10028051 Ga0157373_100280513 678
171 3300013297 Ga0157378_10003138 Ga0157378_100031382 678
172 3300013297 Ga0157378_10059528 Ga0157378_100595283 678
173 3300013306 Ga0163162_10022007 Ga0163162_100220074 678
174 3300013307 Ga0157372_10014854 Ga0157372_100148547 678
175 3300013308 Ga0157375_10020879 Ga0157375_100208795 678
176 3300013308 Ga0157375_10091111 Ga0157375_100911112 678
177 3300014325 Ga0163163_10003070 Ga0163163_1000307010 678
178 3300014325 Ga0163163_10005004 Ga0163163_100050046 678
179 3300014326 Ga0157380_10001541 Ga0157380_1000154120 678
180 3300014969 Ga0157376_10005544 Ga0157376_100055442 678
181 3300014969 Ga0157376_10061920 Ga0157376_100619202 678
182 3300025321 Ga0207656_10010277 Ga0207656_100102773 678
183 3300025908 Ga0207643_10007669 Ga0207643_100076694 678
184 3300025912 Ga0207707_10018053 Ga0207707_100180532 678
185 3300025913 Ga0207695_10109600 Ga0207695_101096002 678
186 3300025914 Ga0207671_10011916 Ga0207671_100119167 678
187 3300025918 Ga0207662_10017781 Ga0207662_100177813 678
188 3300025923 Ga0207681_10006122 Ga0207681_100061225 678
189 3300025927 Ga0207687_10013080 Ga0207687_100130803 678
190 3300025934 Ga0207686_10012907 Ga0207686_100129073 678
191 3300025940 Ga0207691_10000304 Ga0207691_1000030416 678
192 3300025941 Ga0207711_10006063 Ga0207711_100060636 678
193 3300025941 Ga0207711_10019680 Ga0207711_100196804 678
194 3300025942 Ga0207689_10005435 Ga0207689_100054354 678
195 3300025942 Ga0207689_10005674 Ga0207689_100056746 678
196 3300025945 Ga0207679_10003879 Ga0207679_100038795 678
197 3300025960 Ga0207651_10016036 Ga0207651_100160363 678
198 3300025960 Ga0207651_10061818 Ga0207651_100618182 678
199 3300025961 Ga0207712_10027713 Ga0207712_100277133 678
200 3300025981 Ga0207640_10010496 Ga0207640_100104963 678
201 3300025986 Ga0207658_10028725 Ga0207658_100287253 678
202 3300026023 Ga0207677_10001502 Ga0207677_100015027 678
203 3300026075 Ga0207708_10001792 Ga0207708_100017923 678
204 3300026075 Ga0207708_10004179 Ga0207708_100041796 678
205 3300026089 Ga0207648_10017232 Ga0207648_100172323 678
206 3300026089 Ga0207648_10049493 Ga0207648_100494933 678
207 3300026095 Ga0207676_10002231 Ga0207676_100022315 678
208 3300026116 Ga0207674_10000216 Ga0207674_1000021625 678
209 3300026118 Ga0207675_100017045 Ga0207675_1000170454 678
210 3300026121 Ga0207683_10053767 Ga0207683_100537672 678
211 3300031548 Ga0307408_100063924 Ga0307408_1000639243 678
212 3300031824 Ga0307413_10006965 Ga0307413_100069655 678
213 3300031852 Ga0307410_10016031 Ga0307410_100160313 678
214 3300031901 Ga0307406_10004002 Ga0307406_100040023 678
215 3300031911 Ga0307412_10012202 Ga0307412_100122024 678
216 3300032002 Ga0307416_100012290 Ga0307416_1000122905 678
217 3300032004 Ga0307414_10001942 Ga0307414_1000194215 678
218 3300035091 Ga0373951_0004173 Ga0373951_0004173_778_2853 678
219 3300048915 Ga0496112_0114843 Ga0496112_0114843_414_2489 678
220 3300049660 Ga0501216_002127 Ga0501216_002127_195_2267 678
221 3300049661 Ga0501217_000189 Ga0501217_000189_6509_8581 678
222 3300049663 Ga0501223_001612 Ga0501223_001612_434_2506 678
223 3300049705 Ga0501225_0000472 Ga0501225_0000472_8154_10226 678
224 3300049853 Ga0501226_000915 Ga0501226_000915_1450_3522 678
225 3300050507 nmdc:mga05p37_16555_c1 nmdc:mga05p37_16555_c1_5150_7222 678
226 3300006163 Ga0070715_10000039 Ga0070715_100000395 679
227 3300006173 Ga0070716_100000014 Ga0070716_10000001462 679
228 3300025905 Ga0207685_10000024 Ga0207685_100000245 679
229 3300025939 Ga0207665_10000029 Ga0207665_1000002935 679
230 3300039437 Ga0436365_0703466 Ga0436365_0703466_2291_4366 679
231 3300002074 JGI24748J21848_1000011 JGI24748J21848_10000117 680
232 3300002239 JGI24034J26672_10000037 JGI24034J26672_1000003723 680
233 3300005334 Ga0068869_100077304 Ga0068869_1000773042 680
234 3300005441 Ga0070700_100014577 Ga0070700_1000145772 680
235 3300005467 Ga0070706_100006914 Ga0070706_1000069147 680
236 3300005468 Ga0070707_100000659 Ga0070707_10000065916 680
237 3300005518 Ga0070699_100128729 Ga0070699_1001287291 680
238 3300005536 Ga0070697_100007696 Ga0070697_1000076965 680
239 3300005544 Ga0070686_100037221 Ga0070686_1000372212 680
240 3300005549 Ga0070704_100001306 Ga0070704_10000130615 680
241 3300005617 Ga0068859_100105821 Ga0068859_1001058212 680
242 3300005842 Ga0068858_100000052 Ga0068858_10000005218 680
243 3300006852 Ga0075433_10051962 Ga0075433_100519622 680
244 3300006852 Ga0075433_10079695 Ga0075433_100796952 680
245 3300006871 Ga0075434_100029476 Ga0075434_1000294764 680
246 3300006914 Ga0075436_100000052 Ga0075436_10000005226 680
247 3300006931 Ga0097620_100105820 Ga0097620_1001058202 680
248 3300009101 Ga0105247_10000003 Ga0105247_10000003463 680
249 3300009147 Ga0114129_10032240 Ga0114129_100322404 680
250 3300009147 Ga0114129_10056492 Ga0114129_100564922 680
251 3300009148 Ga0105243_10001156 Ga0105243_1000115616 680
252 3300009176 Ga0105242_10004814 Ga0105242_100048142 680
253 3300013297 Ga0157378_10000306 Ga0157378_1000030648 680
254 3300013306 Ga0163162_10032409 Ga0163162_100324092 680
255 3300013308 Ga0157375_10048979 Ga0157375_100489793 680
256 3300025223 Ga0207672_1000060 Ga0207672_10000605 680
257 3300025885 Ga0207653_10000205 Ga0207653_1000020518 680
258 3300025900 Ga0207710_10000001 Ga0207710_10000001847 680
259 3300025922 Ga0207646_10000702 Ga0207646_1000070229 680
260 3300025931 Ga0207644_10000341 Ga0207644_100003414 680
261 3300025934 Ga0207686_10004249 Ga0207686_100042493 680
262 3300025935 Ga0207709_10001548 Ga0207709_1000154811 680
263 3300025941 Ga0207711_10033026 Ga0207711_100330261 680
264 3300026035 Ga0207703_10000055 Ga0207703_10000055131 680
265 3300026118 Ga0207675_100003050 Ga0207675_10000305016 680
266 3300048909 Ga0496106_0001691 Ga0496106_0001691_2511_4556 680
267 3300050507 nmdc:mga05p37_30803_c2 nmdc:mga05p37_30803_c2_3202_5250 680
268 3300050514 nmdc:mga08x19_106_c1 nmdc:mga08x19_106_c1_19645_21711 680

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

263

564

0.96

PF03793

PASTA

PASTA domain

641

697

0.91

PF03717

PBP_dimer

Penicillin-binding Protein dimerisation domain

61

226

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
5uy7-assembly1.cif.gz_A crystal structure of a peptidoglycan glycosyltransferase from burkholderia ambifaria 0.9443 225 570
6i1i-assembly1.cif.gz_A crystal structure of tp domain from escherichia coli penicillin-binding protein 3 in complex with penicillin 0.9357 225 570
6xqz-assembly1.cif.gz_A crystal structure of the catalytic domain of pbp2 s310a from neisseria gonorrhoeae at ph 7.5 0.9327 225 572
5uy7-assembly1.cif.gz_A crystal structure of a peptidoglycan glycosyltransferase from burkholderia ambifaria 0.9327 225 570
6vbl-assembly1.cif.gz_A crystal structure of the transpeptidase domain of pbp2 from the neisseria gonorrhoeae cephalosporin decreased susceptibility strain 35/02 0.9281 225 568
ID Description Score Start End Superfamily
5df7A02 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9489 227 569 3.40.710.10
5uy7A00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9443 225 570 3.40.710.10
af_Q2FZ94_658_713_3.30.10.20 Alpha Beta;2-Layer Sandwich;Trypsin Inhibitor V; Chain A; 0.9432 624 677 3.30.10.20
3equB02 Alpha Beta;2-Layer Sandwich;Beta-Lactamase; 0.9417 228 570 3.30.450.330
5uy7A00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.9327 225 570 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A2H0LN92-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9667 267 565 GO:0005886
GO:0008658
GO:0071555
AF-X1BEN5-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9556 335 569 GO:0005886
GO:0008658
GO:0071555
AF-A0A3N5L796-F1-model_v4 Penicillin-binding protein 2 0.9549 370 569 GO:0005886
GO:0008658
GO:0071555
AF-A0A3N5JGX7-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9544 327 568 GO:0005886
GO:0008658
GO:0071555
AF-X1Q2X3-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9506 297 556 GO:0005886
GO:0008658
GO:0071555

Feature Viewer

pLDDT pTM Quality
81.85 0.7 High
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Predicted Structure (AlphaFold2)

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