F375219

General Info

Members Datasets Scaffolds Average Seq Length
268 184 536 333

Family's Representative Sequence

Representative Sequence 3300003214|JGI25165J46597_1000489|JGI25165J46597_100048922
Length 363
Sequence MSPYGICGARKIVSQPSAQMVTIGSGAARRWRVTQELTLVTGVSGFVGAAVARTLAASGRRVRGLVRSTSPGANLADFPGELVEGDLRDAASVNRAMAGVRHVFHVAADYRIWARDPEEIVRNNRATTQNVIDAALGAGIERMVYTSSVATLLPDPAGAADEGRAARPEQVVGAYKRSKVVAENLIRLAIADRGLPAVIVHPSTPIGPGDVKPTPTGRILVEAANGKMPAFVDSGLNLVHVDDVARGHLLALEHGRIGEGYILGGQDVALGEMLAAIARQVGRKPPTIRIPRLPLMPLAWANERFAALLGYEPFLTLDGLRMAGHHMFYSSAKAERELGYSARPYEAAIADAIAWFRETGMIR

Samples

Sample ID Description Type Environment
1 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
7 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
71 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
113 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
123 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
124 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
125 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
126 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
127 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
132 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
135 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
136 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
137 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
140 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
141 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
142 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
145 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
148 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
149 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
150 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
161 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
162 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
163 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
164 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
167 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
168 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
169 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
170 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
171 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
172 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
175 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
176 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
177 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
178 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
179 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
180 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
181 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
182 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
183 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
184 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0
Isolates 0.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.85
Nodule 0
Rhizoplane 5.6
Rhizosphere 80.97
Stem 0
Stem Tuber 0
Unclassified 2.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000489 3300003214 Bacteria 38233
2 JGI24740J21852_10014366 3300001979 Bacteria 2922
3 JGI24739J22299_10008771 3300001989 Bacteria 3770
4 JGI24737J22298_10001928 3300001990 Bacteria 7416
5 JGI24737J22298_10020734 3300001990 Bacteria 2097
6 JGI24735J21928_10009430 3300002067 Bacteria 3134
7 JGI24738J21930_10009627 3300002075 Bacteria 2169
8 Ga0055542_1002995 3300003762 Bacteria 4926
9 Ga0070658_10002598 3300005327 Bacteria 15043
10 Ga0070680_100085585 3300005336 Bacteria 2605
11 Ga0070680_100298001 3300005336 Unclassified 1367
12 Ga0068868_100163310 3300005338 Bacteria 1841
13 Ga0070660_100032250 3300005339 Bacteria 3941
14 Ga0070691_10001140 3300005341 Bacteria 11052
15 Ga0070661_100016207 3300005344 Bacteria 5264
16 Ga0070668_100327110 3300005347 Bacteria 1292
17 Ga0070671_100008759 3300005355 Bacteria 8118
18 Ga0070667_100001920 3300005367 Bacteria 18445
19 Ga0070709_10002256 3300005434 Bacteria 10444
20 Ga0070709_10064654 3300005434 Bacteria 2340
21 Ga0070714_100067739 3300005435 Bacteria 3079
22 Ga0070713_100000007 3300005436 Bacteria 186402
23 Ga0070708_100088198 3300005445 Bacteria 2820
24 Ga0070662_100124752 3300005457 Bacteria 1978
25 Ga0070681_10025159 3300005458 Bacteria 5990
26 Ga0070681_10050520 3300005458 Bacteria 4148
27 Ga0070699_100024162 3300005518 Bacteria 5237
28 Ga0070699_100084624 3300005518 Bacteria 2768
29 Ga0070679_100028814 3300005530 Bacteria 5477
30 Ga0070679_100051073 3300005530 Unclassified 4118
31 Ga0070679_100274510 3300005530 Bacteria 1639
32 Ga0070684_100087638 3300005535 Bacteria 2764
33 Ga0070697_100046168 3300005536 Bacteria 3530
34 Ga0068853_100116861 3300005539 Bacteria 2375
35 Ga0070672_100044634 3300005543 Bacteria 3425
36 Ga0070672_100092221 3300005543 Bacteria 2445
37 Ga0070695_100044984 3300005545 Unclassified 2813
38 Ga0070693_100015609 3300005547 Bacteria 3914
39 Ga0070665_100009420 3300005548 Bacteria 9885
40 Ga0068855_100094861 3300005563 Bacteria 3440
41 Ga0068855_100365752 3300005563 Bacteria 1586
42 Ga0068855_100420478 3300005563 Bacteria 1462
43 Ga0068857_100000974 3300005577 Bacteria 21916
44 Ga0068854_100006886 3300005578 Bacteria 7249
45 Ga0068856_100000142 3300005614 Bacteria 72931
46 Ga0068856_100002477 3300005614 Bacteria 19006
47 Ga0068856_100084084 3300005614 Bacteria 3161
48 Ga0068856_100215087 3300005614 Bacteria 1937
49 Ga0068852_100007724 3300005616 Bacteria 7865
50 Ga0068852_100160136 3300005616 Bacteria 2101
51 Ga0068852_100171270 3300005616 Bacteria 2035
52 Ga0068864_100000565 3300005618 Bacteria 31584
53 Ga0068861_100084763 3300005719 Bacteria 2488
54 Ga0068851_10032776 3300005834 Bacteria 2585
55 Ga0068863_100000051 3300005841 Bacteria 127526
56 Ga0068858_100003243 3300005842 Bacteria 16232
57 Ga0068858_100100172 3300005842 Bacteria 2702
58 Ga0068860_100000187 3300005843 Bacteria 98756
59 Ga0081455_10000088 3300005937 Bacteria 98815
60 Ga0070717_10000364 3300006028 Bacteria 29183
61 Ga0070716_100032538 3300006173 Unclassified 2845
62 Ga0070712_100000015 3300006175 Bacteria 106593
63 Ga0070712_100025156 3300006175 Bacteria 3954
64 Ga0075366_10051447 3300006195 Bacteria 2448
65 Ga0075434_100129096 3300006871 Bacteria 2546
66 Ga0075436_100000024 3300006914 Bacteria 115057
67 Ga0075436_100010049 3300006914 Bacteria 6475
68 Ga0075435_100034268 3300007076 Bacteria 4022
69 Ga0105240_10055977 3300009093 Bacteria 4936
70 Ga0105240_10123574 3300009093 Bacteria 3114
71 Ga0111539_10000284 3300009094 Bacteria 60882
72 Ga0105241_10003921 3300009174 Bacteria 11018
73 Ga0105241_10309142 3300009174 Bacteria 1359
74 Ga0105248_10008723 3300009177 Bacteria 11136
75 Ga0105248_10013887 3300009177 Bacteria 8861
76 Ga0105237_10006932 3300009545 Bacteria 12489
77 Ga0105238_10022562 3300009551 Bacteria 6415
78 Ga0105238_10197618 3300009551 Bacteria 1987
79 Ga0105238_10493608 3300009551 Bacteria 1224
80 Ga0105249_10307848 3300009553 Unclassified 1591
81 Ga0105239_10189614 3300010375 Bacteria 2302
82 Ga0157373_10000231 3300013100 Bacteria 45740
83 Ga0157373_10109728 3300013100 Bacteria 1940
84 Ga0157371_10000146 3300013102 Bacteria 103290
85 Ga0157370_10000503 3300013104 Bacteria 48827
86 Ga0157370_10002391 3300013104 Bacteria 22634
87 Ga0157370_10024422 3300013104 Bacteria 5986
88 Ga0157370_10035394 3300013104 Bacteria 4853
89 Ga0157369_10022634 3300013105 Bacteria 7008
90 Ga0157369_10045417 3300013105 Bacteria 4778
91 Ga0157369_10056705 3300013105 Bacteria 4227
92 Ga0157369_10120042 3300013105 Bacteria 2790
93 Ga0157378_10156244 3300013297 Bacteria 2130
94 Ga0163162_10014904 3300013306 Bacteria 7591
95 Ga0157372_10130253 3300013307 Bacteria 2894
96 Ga0157372_10134923 3300013307 Bacteria 2842
97 Ga0163163_10183642 3300014325 Bacteria 2139
98 Ga0157379_10176276 3300014968 Bacteria 1930
99 Ga0163161_10054878 3300017792 Bacteria 2892
100 Ga0213876_10032569 3300021384 Bacteria 2749
101 Ga0209026_1006180 3300025250 Bacteria 3011
102 Ga0209148_1000061 3300025254 Bacteria 349575
103 Ga0209233_1000382 3300025261 Bacteria 38319
104 Ga0209050_1022593 3300025298 Bacteria 2249
105 Ga0207647_10001094 3300025904 Bacteria 20910
106 Ga0207647_10063308 3300025904 Bacteria 2250
107 Ga0207699_10000147 3300025906 Bacteria 45662
108 Ga0207645_10168719 3300025907 Bacteria 1434
109 Ga0207705_10001001 3300025909 Bacteria 23017
110 Ga0207705_10001461 3300025909 Bacteria 18836
111 Ga0207654_10007586 3300025911 Bacteria 5468
112 Ga0207654_10206477 3300025911 Bacteria 1296
113 Ga0207695_10005233 3300025913 Bacteria 17336
114 Ga0207671_10020145 3300025914 Bacteria 5083
115 Ga0207671_10287288 3300025914 Bacteria 1298
116 Ga0207671_10373287 3300025914 Bacteria 1133
117 Ga0207693_10000048 3300025915 Bacteria 100685
118 Ga0207693_10015924 3300025915 Bacteria 6020
119 Ga0207663_10153141 3300025916 Bacteria 1619
120 Ga0207657_10000273 3300025919 Bacteria 54891
121 Ga0207649_10000110 3300025920 Bacteria 69018
122 Ga0207649_10000114 3300025920 Bacteria 68080
123 Ga0207649_10000145 3300025920 Bacteria 59071
124 Ga0207646_10125685 3300025922 Bacteria 2306
125 Ga0207694_10006559 3300025924 Bacteria 8845
126 Ga0207694_10101388 3300025924 Bacteria 2281
127 Ga0207694_10302663 3300025924 Bacteria 1317
128 Ga0207700_10000014 3300025928 Bacteria 229475
129 Ga0207664_10069351 3300025929 Bacteria 2835
130 Ga0207706_10042316 3300025933 Bacteria 4037
131 Ga0207706_10052863 3300025933 Bacteria 3586
132 Ga0207669_10008618 3300025937 Bacteria 4798
133 Ga0207691_10009520 3300025940 Bacteria 9329
134 Ga0207691_10111814 3300025940 Bacteria 2428
135 Ga0207711_10012614 3300025941 Bacteria 7020
136 Ga0207711_10066926 3300025941 Bacteria 3108
137 Ga0207679_10215595 3300025945 Bacteria 1612
138 Ga0207667_10006094 3300025949 Bacteria 14658
139 Ga0207667_10023173 3300025949 Bacteria 6838
140 Ga0207668_10110079 3300025972 Bacteria 2065
141 Ga0207640_10004191 3300025981 Bacteria 7797
142 Ga0207640_10230957 3300025981 Bacteria 1423
143 Ga0207658_10008004 3300025986 Bacteria 7198
144 Ga0207703_10032684 3300026035 Bacteria 4119
145 Ga0207703_10135360 3300026035 Unclassified 2132
146 Ga0207639_10011221 3300026041 Bacteria 6216
147 Ga0207639_10032892 3300026041 Bacteria 3822
148 Ga0207639_10043455 3300026041 Bacteria 3374
149 Ga0207639_10146395 3300026041 Unclassified 1973
150 Ga0207678_10005571 3300026067 Bacteria 11258
151 Ga0207678_10167293 3300026067 Bacteria 1877
152 Ga0207702_10000066 3300026078 Bacteria 117825
153 Ga0207702_10003508 3300026078 Bacteria 14298
154 Ga0207702_10061717 3300026078 Bacteria 3198
155 Ga0207702_10178760 3300026078 Bacteria 1952
156 Ga0207641_10000675 3300026088 Bacteria 37002
157 Ga0207676_10000214 3300026095 Bacteria 49961
158 Ga0207676_10432596 3300026095 Bacteria 1237
159 Ga0207674_10000004 3300026116 Bacteria 241430
160 Ga0207698_10049001 3300026142 Bacteria 3212
161 Ga0207698_10126496 3300026142 Bacteria 2175
162 Ga0207698_10168906 3300026142 Bacteria 1923
163 Ga0268266_10022606 3300028379 Bacteria 5354
164 Ga0268264_10000040 3300028381 Bacteria 373714
165 Ga0307405_10028291 3300031731 Bacteria 3263
166 Ga0373923_0009826 3300035111 Bacteria 3463
167 Ga0373923_0054017 3300035111 Bacteria 1690
168 Ga0373953_0011744 3300035117 Bacteria 3085
169 Ga0373954_0045438 3300035118 Bacteria 2052
170 Ga0373954_0138016 3300035118 Bacteria 1189
171 Ga0373956_0096681 3300035119 Bacteria 1366
172 Ga0373956_0156298 3300035119 Bacteria 1074
173 Ga0373955_0002939 3300035172 Bacteria 7469
174 Ga0373955_0020767 3300035172 Bacteria 3306
175 Ga0373955_0026808 3300035172 Bacteria 2973
176 Ga0373931_0013079 3300035691 Bacteria 4034
177 Ga0373933_0049536 3300035724 Bacteria 2505
178 Ga0373933_0220962 3300035724 Bacteria 1215
179 Ga0373937_0004285 3300036401 Bacteria 12086
180 Ga0373937_0040984 3300036401 Bacteria 4223
181 Ga0373925_0276724 3300037068 Bacteria 1351
182 Ga0395899_0259473 3300037312 Bacteria 1189
183 Ga0395898_0370407 3300037466 Bacteria 1366
184 Ga0395905_0063476 3300037471 Bacteria 3456
185 Ga0395905_0405665 3300037471 Bacteria 1258
186 Ga0395901_0063736 3300038443 Bacteria 3837
187 Ga0436363_0345533 3300039450 Bacteria 4410
188 Ga0439448_0003855 3300042005 Bacteria 4195
189 Ga0439448_0009062 3300042005 Bacteria 2927
190 Ga0439448_0010585 3300042005 Bacteria 2737
191 Ga0439455_0000764 3300042012 Bacteria 4828
192 Ga0439458_0000258 3300042157 Bacteria 12892
193 Ga0439458_0005715 3300042157 Bacteria 2787
194 Ga0466972_0002004 3300044658 Bacteria 9975
195 Ga0466965_0011120 3300044683 Bacteria 4211
196 Ga0466966_0031177 3300044684 Bacteria 3458
197 Ga0466961_0006189 3300044693 Bacteria 7597
198 Ga0466971_0002107 3300044719 Bacteria 8434
199 Ga0466968_0050148 3300044735 Bacteria 1780
200 Ga0466960_0015820 3300044901 Bacteria 3260
201 Ga0466959_0077779 3300045049 Bacteria 2393
202 Ga0466958_0021306 3300045836 Bacteria 3786
203 Ga0466967_0259874 3300045976 Bacteria 1661
204 Ga0495596_0015028 3300046500 Bacteria 3252
205 Ga0495583_0013465 3300046506 Bacteria 4560
206 Ga0495583_0015512 3300046506 Bacteria 4141
207 Ga0495643_0006146 3300046522 Bacteria 7976
208 Ga0495648_0000750 3300046524 Bacteria 34697
209 Ga0495663_0002995 3300046525 Bacteria 4964
210 Ga0495633_0001042 3300046558 Bacteria 22695
211 Ga0495668_0000007 3300046616 Bacteria 552902
212 Ga0495625_0063598 3300046660 Bacteria 2605
213 Ga0495599_0080891 3300046678 Bacteria 2029
214 Ga0495669_0000197 3300046684 Bacteria 37314
215 Ga0495613_0234079 3300046689 Bacteria 1286
216 Ga0495649_0048847 3300046694 Bacteria 2299
217 Ga0495687_000178 3300047443 Bacteria 93234
218 Ga0495687_000511 3300047443 Bacteria 46733
219 Ga0495677_0013075 3300047445 Bacteria 3020
220 Ga0495681_0065215 3300047470 Bacteria 1666
221 Ga0495686_0000202 3300047472 Bacteria 110778
222 Ga0495602_0162751 3300048088 Bacteria 1740
223 Ga0496102_0003395 3300048905 Bacteria 13501
224 Ga0496103_0000244 3300048906 Bacteria 53008
225 Ga0496104_0017823 3300048907 Bacteria 6474
226 Ga0496104_0157174 3300048907 Bacteria 2182
227 Ga0496105_0000715 3300048908 Bacteria 22456
228 Ga0496105_0018284 3300048908 Bacteria 5629
229 Ga0496106_0204103 3300048909 Bacteria 1574
230 Ga0496107_0134703 3300048910 Bacteria 1825
231 Ga0496107_0307560 3300048910 Bacteria 1180
232 Ga0496110_0065611 3300048913 Bacteria 3210
233 Ga0496112_0087383 3300048915 Bacteria 3085
234 Ga0496114_0007352 3300048917 Bacteria 8698
235 Ga0496114_0170104 3300048917 Bacteria 1899
236 Ga0496115_0000416 3300048918 Bacteria 34725
237 Ga0496116_0003410 3300048919 Bacteria 15719
238 Ga0496117_0001241 3300048920 Bacteria 38164
239 Ga0496117_0040979 3300048920 Bacteria 3400
240 Ga0496118_0000580 3300048921 Bacteria 60421
241 Ga0496118_0005719 3300048921 Bacteria 13995
242 Ga0496119_0008818 3300048922 Bacteria 8777
243 Ga0496119_0055474 3300048922 Bacteria 2407
244 Ga0496119_0071952 3300048922 Bacteria 2022
245 Ga0496121_0001436 3300048924 Bacteria 40248
246 Ga0496121_0003691 3300048924 Bacteria 21490
247 Ga0496121_0004913 3300048924 Bacteria 17540
248 Ga0496122_0002969 3300048925 Bacteria 23111
249 Ga0496122_0011384 3300048925 Bacteria 9017
250 Ga0496123_0001480 3300048926 Bacteria 32605
251 Ga0496123_0038131 3300048926 Bacteria 3383
252 Ga0496124_0000626 3300048927 Bacteria 58823
253 Ga0496125_0001330 3300048928 Bacteria 36490
254 Ga0496125_0009357 3300048928 Bacteria 10094
255 Ga0496126_0000752 3300048929 Bacteria 58828
256 nmdc:mga08y16_138083_c1 3300050511 Bacteria 2534
257 nmdc:mga08x19_2527_c1 3300050514 Bacteria 11115
258 nmdc:mga08x19_52_c1 3300050514 Bacteria 123790
259 Ga0500556_0000143 3300053104 Bacteria 59621
260 Ga0500595_025322 3300053119 Bacteria 2059
261 Ga0500642_0002622 3300053130 Bacteria 5314
262 Ga0500622_0001426 3300053156 Bacteria 19193
263 Ga0500624_000020 3300053157 Bacteria 118392
264 Ga0500637_0000022 3300053178 Bacteria 61494
265 Ga0500596_003266 3300053735 Bacteria 3111
266 Ga0466962_0001730 3300061719 Bacteria 10263
267 2600200915 2599185354 Bacteria 4398675
268 2753765239 2751185897 Bacteria 5322941
269 JGI25165J46597_1000489
270 JGI24740J21852_10014366
271 JGI24739J22299_10008771
272 JGI24737J22298_10001928
273 JGI24737J22298_10020734
274 JGI24735J21928_10009430
275 JGI24738J21930_10009627
276 Ga0055542_1002995
277 Ga0070658_10002598
278 Ga0070680_100085585
279 Ga0070680_100298001
280 Ga0068868_100163310
281 Ga0070660_100032250
282 Ga0070691_10001140
283 Ga0070661_100016207
284 Ga0070668_100327110
285 Ga0070671_100008759
286 Ga0070667_100001920
287 Ga0070709_10002256
288 Ga0070709_10064654
289 Ga0070714_100067739
290 Ga0070713_100000007
291 Ga0070708_100088198
292 Ga0070662_100124752
293 Ga0070681_10025159
294 Ga0070681_10050520
295 Ga0070699_100024162
296 Ga0070699_100084624
297 Ga0070679_100028814
298 Ga0070679_100051073
299 Ga0070679_100274510
300 Ga0070684_100087638
301 Ga0070697_100046168
302 Ga0068853_100116861
303 Ga0070672_100044634
304 Ga0070672_100092221
305 Ga0070695_100044984
306 Ga0070693_100015609
307 Ga0070665_100009420
308 Ga0068855_100094861
309 Ga0068855_100365752
310 Ga0068855_100420478
311 Ga0068857_100000974
312 Ga0068854_100006886
313 Ga0068856_100000142
314 Ga0068856_100002477
315 Ga0068856_100084084
316 Ga0068856_100215087
317 Ga0068852_100007724
318 Ga0068852_100160136
319 Ga0068852_100171270
320 Ga0068864_100000565
321 Ga0068861_100084763
322 Ga0068851_10032776
323 Ga0068863_100000051
324 Ga0068858_100003243
325 Ga0068858_100100172
326 Ga0068860_100000187
327 Ga0081455_10000088
328 Ga0070717_10000364
329 Ga0070716_100032538
330 Ga0070712_100000015
331 Ga0070712_100025156
332 Ga0075366_10051447
333 Ga0075434_100129096
334 Ga0075436_100000024
335 Ga0075436_100010049
336 Ga0075435_100034268
337 Ga0105240_10055977
338 Ga0105240_10123574
339 Ga0111539_10000284
340 Ga0105241_10003921
341 Ga0105241_10309142
342 Ga0105248_10008723
343 Ga0105248_10013887
344 Ga0105237_10006932
345 Ga0105238_10022562
346 Ga0105238_10197618
347 Ga0105238_10493608
348 Ga0105249_10307848
349 Ga0105239_10189614
350 Ga0157373_10000231
351 Ga0157373_10109728
352 Ga0157371_10000146
353 Ga0157370_10000503
354 Ga0157370_10002391
355 Ga0157370_10024422
356 Ga0157370_10035394
357 Ga0157369_10022634
358 Ga0157369_10045417
359 Ga0157369_10056705
360 Ga0157369_10120042
361 Ga0157378_10156244
362 Ga0163162_10014904
363 Ga0157372_10130253
364 Ga0157372_10134923
365 Ga0163163_10183642
366 Ga0157379_10176276
367 Ga0163161_10054878
368 Ga0213876_10032569
369 Ga0209026_1006180
370 Ga0209148_1000061
371 Ga0209233_1000382
372 Ga0209050_1022593
373 Ga0207647_10001094
374 Ga0207647_10063308
375 Ga0207699_10000147
376 Ga0207645_10168719
377 Ga0207705_10001001
378 Ga0207705_10001461
379 Ga0207654_10007586
380 Ga0207654_10206477
381 Ga0207695_10005233
382 Ga0207671_10020145
383 Ga0207671_10287288
384 Ga0207671_10373287
385 Ga0207693_10000048
386 Ga0207693_10015924
387 Ga0207663_10153141
388 Ga0207657_10000273
389 Ga0207649_10000110
390 Ga0207649_10000114
391 Ga0207649_10000145
392 Ga0207646_10125685
393 Ga0207694_10006559
394 Ga0207694_10101388
395 Ga0207694_10302663
396 Ga0207700_10000014
397 Ga0207664_10069351
398 Ga0207706_10042316
399 Ga0207706_10052863
400 Ga0207669_10008618
401 Ga0207691_10009520
402 Ga0207691_10111814
403 Ga0207711_10012614
404 Ga0207711_10066926
405 Ga0207679_10215595
406 Ga0207667_10006094
407 Ga0207667_10023173
408 Ga0207668_10110079
409 Ga0207640_10004191
410 Ga0207640_10230957
411 Ga0207658_10008004
412 Ga0207703_10032684
413 Ga0207703_10135360
414 Ga0207639_10011221
415 Ga0207639_10032892
416 Ga0207639_10043455
417 Ga0207639_10146395
418 Ga0207678_10005571
419 Ga0207678_10167293
420 Ga0207702_10000066
421 Ga0207702_10003508
422 Ga0207702_10061717
423 Ga0207702_10178760
424 Ga0207641_10000675
425 Ga0207676_10000214
426 Ga0207676_10432596
427 Ga0207674_10000004
428 Ga0207698_10049001
429 Ga0207698_10126496
430 Ga0207698_10168906
431 Ga0268266_10022606
432 Ga0268264_10000040
433 Ga0307405_10028291
434 Ga0373923_0009826
435 Ga0373923_0054017
436 Ga0373953_0011744
437 Ga0373954_0045438
438 Ga0373954_0138016
439 Ga0373956_0096681
440 Ga0373956_0156298
441 Ga0373955_0002939
442 Ga0373955_0020767
443 Ga0373955_0026808
444 Ga0373931_0013079
445 Ga0373933_0049536
446 Ga0373933_0220962
447 Ga0373937_0004285
448 Ga0373937_0040984
449 Ga0373925_0276724
450 Ga0395899_0259473
451 Ga0395898_0370407
452 Ga0395905_0063476
453 Ga0395905_0405665
454 Ga0395901_0063736
455 Ga0436363_0345533
456 Ga0439448_0003855
457 Ga0439448_0009062
458 Ga0439448_0010585
459 Ga0439455_0000764
460 Ga0439458_0000258
461 Ga0439458_0005715
462 Ga0466972_0002004
463 Ga0466965_0011120
464 Ga0466966_0031177
465 Ga0466961_0006189
466 Ga0466971_0002107
467 Ga0466968_0050148
468 Ga0466960_0015820
469 Ga0466959_0077779
470 Ga0466958_0021306
471 Ga0466967_0259874
472 Ga0495596_0015028
473 Ga0495583_0013465
474 Ga0495583_0015512
475 Ga0495643_0006146
476 Ga0495648_0000750
477 Ga0495663_0002995
478 Ga0495633_0001042
479 Ga0495668_0000007
480 Ga0495625_0063598
481 Ga0495599_0080891
482 Ga0495669_0000197
483 Ga0495613_0234079
484 Ga0495649_0048847
485 Ga0495687_000178
486 Ga0495687_000511
487 Ga0495677_0013075
488 Ga0495681_0065215
489 Ga0495686_0000202
490 Ga0495602_0162751
491 Ga0496102_0003395
492 Ga0496103_0000244
493 Ga0496104_0017823
494 Ga0496104_0157174
495 Ga0496105_0000715
496 Ga0496105_0018284
497 Ga0496106_0204103
498 Ga0496107_0134703
499 Ga0496107_0307560
500 Ga0496110_0065611
501 Ga0496112_0087383
502 Ga0496114_0007352
503 Ga0496114_0170104
504 Ga0496115_0000416
505 Ga0496116_0003410
506 Ga0496117_0001241
507 Ga0496117_0040979
508 Ga0496118_0000580
509 Ga0496118_0005719
510 Ga0496119_0008818
511 Ga0496119_0055474
512 Ga0496119_0071952
513 Ga0496121_0001436
514 Ga0496121_0003691
515 Ga0496121_0004913
516 Ga0496122_0002969
517 Ga0496122_0011384
518 Ga0496123_0001480
519 Ga0496123_0038131
520 Ga0496124_0000626
521 Ga0496125_0001330
522 Ga0496125_0009357
523 Ga0496126_0000752
524 nmdc:mga08y16_138083_c1
525 nmdc:mga08x19_2527_c1
526 nmdc:mga08x19_52_c1
527 Ga0500556_0000143
528 Ga0500595_025322
529 Ga0500642_0002622
530 Ga0500622_0001426
531 Ga0500624_000020
532 Ga0500637_0000022
533 Ga0500596_003266
534 Ga0466962_0001730
535 2600200915
536 2753765239

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

38

264

0.91

PF05368

NmrA

NmrA-like family

38

152

0.91

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

38

187

0.89

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

39

256

0.87

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

39

289

0.86

PF07993

NAD_binding_4

Male sterility protein

81

247

0.85

PF13460

NAD_binding_10

NAD(P)H-binding

42

252

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wj7-assembly1.cif.gz_C crystal structure of gox2253 0.8838 10 323
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8585 9 323
3wj7-assembly1.cif.gz_C crystal structure of gox2253 0.8574 10 323
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8505 9 323
3ic5-assembly2.cif.gz_B n-terminal domain of putative saccharopine dehydrogenase from ruegeria pomeroyi. 0.8369 8 116
ID Description Score Start End Superfamily
af_P96816_2_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9188 10 320 3.40.50.720
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9144 10 323 3.40.50.720
af_A0A1D6GEP1_267_439_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9025 8 142 3.40.50.720
af_Q4CNX9_7_80_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.891 9 71 3.40.50.720
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8879 10 323 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2N7QN71-F1-model_v4 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase 0.9758 8 319 GO:0004029
GO:0005737
GO:0016853
AF-A0A7C5M619-F1-model_v4 NAD-dependent dehydratase 0.9678 162 321 GO:0004029
GO:0005737
AF-A0A7V3H4J9-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.965 10 321 GO:0004029
GO:0005737
AF-A0A2V2RNE3-F1-model_v4 NAD-dependent dehydratase 0.9641 10 322 GO:0004029
GO:0005737
AF-A0A662EJR4-F1-model_v4 NAD-dependent dehydratase 0.9638 10 321 GO:0004029
GO:0005737

Map