F374981

General Info

Members Datasets Scaffolds Average Seq Length
267 152 534 329

Family's Representative Sequence

Representative Sequence 3300044901|Ga0466960_0005648|Ga0466960_0005648_1779_2846
Length 355
Sequence VIGWFRRLVLAPAIVVLTVLLVTTIPLWLFWAALLSPLVPGRLRPLRILWLLVLHLVMESLMLVELFGLWIASGFGYFIRRPYFERIHYDIVQLYLDVFFREARRVARLSIVTEGSTPDAFPGEPLLVCCRHAGPADSFTLMYALMHWYGREPRVVLKDTLAWDPVIDVILHRLPNRFISPHPKGGGRGPDLETQVGELASNLDHNDAFVIFPEGGNFTPERRQRAIDKLRRLGLEAMARRAERMENVLAPRPGGLLAALDAAPEADVVLVAHTGLDHLSTVADIWRELPMDKQIIMRWWRVPREEIPESREDRIDWLFSWWERIDAWVEEHRPVDLPPPGWRRQVRAGSTAGRG

Samples

Sample ID Description Type Environment
1 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
26 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
27 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
30 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
31 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
32 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
77 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
78 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
83 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
84 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
85 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
86 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
87 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
88 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
89 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
90 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
94 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
95 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
107 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
121 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
122 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
123 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
126 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
127 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
128 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
129 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
130 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
131 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
132 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
133 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
137 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
138 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
139 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
140 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
141 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
142 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
143 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
144 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
145 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
146 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
147 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
148 2643221615 Nocardioides sp. Root224 Isolate Unclassified
149 2643221641 Nocardioides sp. Root122 Isolate Unclassified
150 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
151 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
152 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 98.13
Metatranscriptomes 0
Isolates 1.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.85
Nodule 0.37
Rhizoplane 11.99
Rhizosphere 68.16
Stem 0
Stem Tuber 0
Unclassified 0.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466960_0005648 3300044901 Bacteria 4964
2 LJQas_1005950 3300000549 Bacteria 1530
3 Ga0070658_10043884 3300005327 Bacteria 3612
4 Ga0070683_100026594 3300005329 Bacteria 5213
5 Ga0070691_10008266 3300005341 Bacteria 4768
6 Ga0070687_100013071 3300005343 Bacteria 3687
7 Ga0070692_10014117 3300005345 Bacteria 3740
8 Ga0070674_100029216 3300005356 Bacteria 3628
9 Ga0070674_100038108 3300005356 Bacteria 3237
10 Ga0070659_100057050 3300005366 Bacteria 3079
11 Ga0070701_10001516 3300005438 Bacteria 8604
12 Ga0070700_100003144 3300005441 Bacteria 8482
13 Ga0070708_100019390 3300005445 Bacteria 5715
14 Ga0070708_100150145 3300005445 Bacteria 2167
15 Ga0070708_100282672 3300005445 Unclassified 1562
16 Ga0070708_100311033 3300005445 Bacteria 1484
17 Ga0070708_100312555 3300005445 Bacteria 1480
18 Ga0068867_100006241 3300005459 Bacteria 8438
19 Ga0070706_100000819 3300005467 Bacteria 34477
20 Ga0070706_100187801 3300005467 Bacteria 1931
21 Ga0070707_100094410 3300005468 Unclassified 2896
22 Ga0070707_100118663 3300005468 Bacteria 2568
23 Ga0070707_100333602 3300005468 Bacteria 1473
24 Ga0070698_100058545 3300005471 Bacteria 3895
25 Ga0070684_100033505 3300005535 Bacteria 4386
26 Ga0070684_100194222 3300005535 Bacteria 1848
27 Ga0070697_100338188 3300005536 Bacteria 1299
28 Ga0068853_100050900 3300005539 Bacteria 3564
29 Ga0070672_100007065 3300005543 Bacteria 7593
30 Ga0070665_100003369 3300005548 Bacteria 17094
31 Ga0070664_100426956 3300005564 Bacteria 1214
32 Ga0070702_100003107 3300005615 Bacteria 7355
33 Ga0068852_100012609 3300005616 Bacteria 6425
34 Ga0068852_100365183 3300005616 Bacteria 1413
35 Ga0068866_10018074 3300005718 Bacteria 3184
36 Ga0068861_100010349 3300005719 Bacteria 6470
37 Ga0068870_10149142 3300005840 Bacteria 1376
38 Ga0068860_100000169 3300005843 Bacteria 107281
39 Ga0075365_10001007 3300006038 Bacteria 12061
40 Ga0075365_10024031 3300006038 Bacteria 3839
41 Ga0075365_10045194 3300006038 Bacteria 2888
42 Ga0075365_10049786 3300006038 Bacteria 2761
43 Ga0075365_10123257 3300006038 Bacteria 1789
44 Ga0075368_10005723 3300006042 Bacteria 4298
45 Ga0075368_10006249 3300006042 Bacteria 4151
46 Ga0075363_100014907 3300006048 Bacteria 3811
47 Ga0075363_100033523 3300006048 Bacteria 2675
48 Ga0075363_100063501 3300006048 Bacteria 1993
49 Ga0075363_100074392 3300006048 Bacteria 1849
50 Ga0075364_10018348 3300006051 Bacteria 4378
51 Ga0075364_10066599 3300006051 Bacteria 2366
52 Ga0075364_10067417 3300006051 Bacteria 2352
53 Ga0075364_10081899 3300006051 Bacteria 2134
54 Ga0075364_10126729 3300006051 Bacteria 1712
55 Ga0075362_10004781 3300006177 Bacteria 4891
56 Ga0075367_10000700 3300006178 Bacteria 12914
57 Ga0075367_10004629 3300006178 Bacteria 6739
58 Ga0075367_10024015 3300006178 Bacteria 3436
59 Ga0075367_10084680 3300006178 Bacteria 1923
60 Ga0075370_10008965 3300006353 Bacteria 5173
61 Ga0075370_10133911 3300006353 Bacteria 1447
62 Ga0075428_100173005 3300006844 Bacteria 2340
63 Ga0111539_10576817 3300009094 Bacteria 1310
64 Ga0105245_10208624 3300009098 Bacteria 1879
65 Ga0105243_10006079 3300009148 Bacteria 9333
66 Ga0105243_10066871 3300009148 Bacteria 2892
67 Ga0105242_10097027 3300009176 Bacteria 2491
68 Ga0105238_10247181 3300009551 Bacteria 1762
69 Ga0105249_10024275 3300009553 Bacteria 5448
70 Ga0105239_10025240 3300010375 Bacteria 6545
71 Ga0105246_10117073 3300011119 Bacteria 1968
72 Ga0157369_10163384 3300013105 Bacteria 2349
73 Ga0157375_10112875 3300013308 Bacteria 2818
74 Ga0157375_10560064 3300013308 Bacteria 1304
75 Ga0157375_10670407 3300013308 Bacteria 1192
76 Ga0163163_10382454 3300014325 Bacteria 1465
77 Ga0157380_10032697 3300014326 Bacteria 4004
78 Ga0157380_10040195 3300014326 Bacteria 3641
79 Ga0157380_10197263 3300014326 Bacteria 1783
80 Ga0157377_10011988 3300014745 Bacteria 4346
81 Ga0207688_10080330 3300025901 Bacteria 1861
82 Ga0207643_10010300 3300025908 Bacteria 5031
83 Ga0207684_10010115 3300025910 Bacteria 8309
84 Ga0207684_10130220 3300025910 Bacteria 2159
85 Ga0207662_10011755 3300025918 Bacteria 4865
86 Ga0207646_10093216 3300025922 Bacteria 2697
87 Ga0207646_10320079 3300025922 Bacteria 1402
88 Ga0207694_10213056 3300025924 Bacteria 1574
89 Ga0207706_10122991 3300025933 Bacteria 2283
90 Ga0207709_10022304 3300025935 Bacteria 3591
91 Ga0207709_10032500 3300025935 Bacteria 3056
92 Ga0207691_10006276 3300025940 Bacteria 11475
93 Ga0207661_10044806 3300025944 Bacteria 3499
94 Ga0207679_10209937 3300025945 Bacteria 1632
95 Ga0207712_10020168 3300025961 Bacteria 4363
96 Ga0207708_10002950 3300026075 Bacteria 12544
97 Ga0207708_10003867 3300026075 Bacteria 11018
98 Ga0207708_10204880 3300026075 Bacteria 1575
99 Ga0207648_10009642 3300026089 Bacteria 9233
100 Ga0207675_100002005 3300026118 Bacteria 20311
101 Ga0207683_10073905 3300026121 Bacteria 3016
102 Ga0207698_10016560 3300026142 Bacteria 4974
103 Ga0207698_10095469 3300026142 Bacteria 2448
104 Ga0209813_10003907 3300027866 Bacteria 3526
105 Ga0207428_10036706 3300027907 Bacteria 3994
106 Ga0268266_10002119 3300028379 Bacteria 21912
107 Ga0268264_10001886 3300028381 Bacteria 19044
108 Ga0307410_10189499 3300031852 Bacteria 1563
109 Ga0307407_10014069 3300031903 Bacteria 3906
110 Ga0307407_10038864 3300031903 Bacteria 2641
111 Ga0307407_10119327 3300031903 Bacteria 1669
112 Ga0307409_100057736 3300031995 Bacteria 3009
113 Ga0307409_100079377 3300031995 Bacteria 2644
114 Ga0307409_100144558 3300031995 Bacteria 2054
115 Ga0307416_100002005 3300032002 Bacteria 11441
116 Ga0307416_100019120 3300032002 Bacteria 4849
117 Ga0307416_100346301 3300032002 Bacteria 1501
118 Ga0307414_10123116 3300032004 Bacteria 1998
119 Ga0307414_10439141 3300032004 Bacteria 1142
120 Ga0307411_10046733 3300032005 Bacteria 2793
121 Ga0307411_10083575 3300032005 Bacteria 2206
122 Ga0307415_100011357 3300032126 Bacteria 5092
123 Ga0307415_100048509 3300032126 Bacteria 2866
124 Ga0373932_0084630 3300035112 Bacteria 1008
125 Ga0395901_0268750 3300038443 Bacteria 1774
126 Ga0242420_025685 3300038996 Bacteria 1072
127 Ga0436365_0342481 3300039437 Bacteria 2054
128 Ga0451795_1476942 3300041456 Bacteria 2028
129 Ga0451843_0923534 3300041509 Bacteria 1531
130 Ga0451853_1399622 3300041512 Bacteria 1400
131 Ga0466972_0030807 3300044658 Bacteria 2641
132 Ga0466966_0002880 3300044684 Bacteria 11335
133 Ga0466966_0024210 3300044684 Bacteria 3973
134 Ga0466961_0014284 3300044693 Bacteria 5097
135 Ga0466961_0027818 3300044693 Bacteria 3636
136 Ga0466961_0061420 3300044693 Bacteria 2388
137 Ga0466963_0014339 3300044694 Bacteria 4886
138 Ga0466963_0122703 3300044694 Bacteria 1789
139 Ga0466971_0021910 3300044719 Bacteria 2844
140 Ga0466971_0046014 3300044719 Bacteria 1961
141 Ga0466970_0013833 3300044765 Bacteria 4139
142 Ga0466957_0026840 3300044842 Bacteria 3418
143 Ga0466957_0082096 3300044842 Bacteria 2009
144 Ga0466960_0000721 3300044901 Bacteria 11557
145 Ga0451576_0266162 3300045051 Bacteria 1792
146 Ga0466958_0023634 3300045836 Bacteria 3611
147 Ga0466967_0103471 3300045976 Bacteria 2605
148 Ga0466967_0157385 3300045976 Bacteria 2129
149 Ga0495641_0060075 3300046461 Bacteria 1718
150 Ga0495581_0125305 3300047315 Bacteria 1496
151 Ga0496100_0081261 3300048903 Bacteria 2189
152 Ga0496100_0138273 3300048903 Bacteria 1723
153 Ga0496101_0008846 3300048904 Bacteria 6592
154 Ga0496102_0019823 3300048905 Bacteria 5928
155 Ga0496102_0053756 3300048905 Bacteria 3671
156 Ga0496102_0170634 3300048905 Bacteria 2048
157 Ga0496103_0007499 3300048906 Bacteria 6502
158 Ga0496104_0009522 3300048907 Bacteria 8647
159 Ga0496104_0354864 3300048907 Bacteria 1379
160 Ga0496105_0000226 3300048908 Bacteria 37984
161 Ga0496105_0128823 3300048908 Bacteria 2087
162 Ga0496106_0007168 3300048909 Bacteria 8235
163 Ga0496106_0030350 3300048909 Bacteria 4032
164 Ga0496107_0019973 3300048910 Bacteria 4730
165 Ga0496107_0243708 3300048910 Bacteria 1337
166 Ga0496108_0050217 3300048911 Bacteria 3491
167 Ga0496108_0069046 3300048911 Bacteria 2982
168 Ga0496108_0215926 3300048911 Bacteria 1666
169 Ga0496108_0264971 3300048911 Bacteria 1495
170 Ga0496108_0405450 3300048911 Bacteria 1191
171 Ga0496110_0029345 3300048913 Bacteria 4733
172 Ga0496110_0040660 3300048913 Bacteria 4053
173 Ga0496110_0051334 3300048913 Bacteria 3623
174 Ga0496113_0064738 3300048916 Bacteria 2765
175 Ga0496113_0113606 3300048916 Bacteria 2111
176 Ga0496114_0016219 3300048917 Bacteria 5998
177 Ga0496114_0089075 3300048917 Bacteria 2618
178 Ga0496114_0097507 3300048917 Bacteria 2504
179 Ga0496114_0306103 3300048917 Bacteria 1403
180 Ga0496115_0003002 3300048918 Bacteria 12121
181 Ga0496115_0124358 3300048918 Bacteria 2124
182 Ga0501031_0013949 3300049568 Bacteria 5233
183 Ga0501031_0163636 3300049568 Bacteria 1454
184 Ga0501032_0020479 3300049569 Bacteria 4606
185 Ga0501032_0038387 3300049569 Bacteria 3262
186 Ga0501033_0269144 3300049570 Bacteria 1205
187 Ga0501036_0079939 3300049572 Bacteria 2765
188 Ga0501036_0098177 3300049572 Bacteria 2476
189 Ga0501036_0388454 3300049572 Bacteria 1164
190 Ga0501037_0006270 3300049573 Bacteria 8696
191 Ga0501038_0060784 3300049574 Bacteria 3233
192 Ga0501039_0004308 3300049575 Bacteria 10730
193 Ga0501039_0053923 3300049575 Bacteria 3112
194 Ga0501039_0120235 3300049575 Bacteria 2058
195 Ga0501040_0013756 3300049576 Bacteria 5324
196 Ga0501042_0014938 3300049578 Bacteria 5308
197 Ga0501042_0081891 3300049578 Bacteria 2313
198 Ga0501048_0005058 3300049582 Bacteria 10049
199 Ga0501048_0028321 3300049582 Bacteria 4066
200 Ga0501048_0317114 3300049582 Bacteria 1110
201 Ga0501067_0005523 3300049583 Bacteria 7006
202 Ga0501067_0048121 3300049583 Bacteria 2365
203 Ga0501067_0113567 3300049583 Bacteria 1506
204 Ga0501067_0127776 3300049583 Bacteria 1414
205 Ga0501068_0144532 3300049584 Bacteria 1492
206 Ga0501069_0022512 3300049585 Bacteria 3429
207 Ga0501069_0023071 3300049585 Bacteria 3390
208 Ga0501069_0162200 3300049585 Bacteria 1287
209 Ga0501071_0004914 3300049587 Bacteria 8529
210 Ga0501071_0027029 3300049587 Bacteria 4034
211 Ga0501071_0160875 3300049587 Bacteria 1678
212 Ga0501071_0327943 3300049587 Bacteria 1163
213 Ga0501072_0008354 3300049588 Bacteria 7862
214 Ga0501072_0065371 3300049588 Bacteria 2868
215 Ga0501072_0077549 3300049588 Bacteria 2631
216 Ga0501073_0274434 3300049589 Bacteria 1163
217 Ga0501074_0083522 3300049590 Bacteria 2290
218 Ga0501074_0142468 3300049590 Bacteria 1714
219 Ga0501074_0393025 3300049590 Bacteria 983
220 Ga0501075_0014239 3300049591 Bacteria 5698
221 Ga0501075_0081044 3300049591 Bacteria 2457
222 Ga0501076_0012417 3300049592 Bacteria 6365
223 Ga0501076_0038459 3300049592 Bacteria 3756
224 Ga0501076_0172587 3300049592 Bacteria 1763
225 Ga0501077_0002870 3300049593 Bacteria 10340
226 Ga0501077_0020332 3300049593 Bacteria 4202
227 Ga0501079_0002009 3300049741 Bacteria 14544
228 Ga0501079_0132887 3300049741 Bacteria 1937
229 Ga0501079_0423485 3300049741 Bacteria 1045
230 Ga0501080_0027366 3300049742 Bacteria 5301
231 Ga0501081_0078130 3300049743 Bacteria 2313
232 Ga0501035_0097746 3300049822 Bacteria 2578
233 Ga0501045_0009662 3300049824 Bacteria 6750
234 Ga0501045_0380418 3300049824 Bacteria 1051
235 nmdc:mga03n38_16094_c1 3300050490 Bacteria 2903
236 nmdc:mga03n38_3001_c1 3300050490 Bacteria 5339
237 nmdc:mga00v17_198151_c1 3300050491 Bacteria 1298
238 nmdc:mga00v17_215669_c1 3300050491 Bacteria 1242
239 nmdc:mga00v17_27643_c1 3300050491 Bacteria 3314
240 nmdc:mga00v17_49061_c1 3300050491 Bacteria 2560
241 nmdc:mga00v17_57165_c1 3300050491 Bacteria 2386
242 nmdc:mga0yw44_182363_c1 3300050492 Bacteria 1382
243 nmdc:mga0yw44_24495_c1 3300050492 Bacteria 3416
244 nmdc:mga0yw44_2608_c1 3300050492 Bacteria 7749
245 nmdc:mga06z11_173448_c1 3300050494 Bacteria 1240
246 nmdc:mga06z11_29855_c1 3300050494 Bacteria 2631
247 nmdc:mga06z11_3548_c1 3300050494 Bacteria 6046
248 nmdc:mga06z11_52491_c1 3300050494 Bacteria 2092
249 nmdc:mga06z11_53384_c1 3300050494 Bacteria 2079
250 nmdc:mga07m45_5029_c1 3300050496 Bacteria 6531
251 nmdc:mga07m45_57380_c1 3300050496 Bacteria 2202
252 Ga0495619_0111911 3300053085 Bacteria 1866
253 Ga0500644_0000034 3300053088 Bacteria 83176
254 Ga0500556_0003065 3300053104 Bacteria 5006
255 Ga0500593_001981 3300053117 Bacteria 7414
256 Ga0500573_0032066 3300053140 Bacteria 3032
257 Ga0501084_0019474 3300054114 Bacteria 5654
258 Ga0501082_0238465 3300060353 Bacteria 1583
259 Ga0501082_0274713 3300060353 Bacteria 1467
260 Ga0530510_0082500 3300061734 Bacteria 2341
261 Ga0530510_0179753 3300061734 Bacteria 1569
262 Ga0530510_0375438 3300061734 Bacteria 1070
263 2644092273 2643221615 Bacteria 5487866
264 2644231780 2643221641 Bacteria 4490190
265 2644322076 2643221657 Bacteria 5490246
266 2855391080 2855386786 Bacteria 4752232
267 8054611756 8054609563 Bacteria 5170090
268 Ga0466960_0005648
269 LJQas_1005950
270 Ga0070658_10043884
271 Ga0070683_100026594
272 Ga0070691_10008266
273 Ga0070687_100013071
274 Ga0070692_10014117
275 Ga0070674_100029216
276 Ga0070674_100038108
277 Ga0070659_100057050
278 Ga0070701_10001516
279 Ga0070700_100003144
280 Ga0070708_100019390
281 Ga0070708_100150145
282 Ga0070708_100282672
283 Ga0070708_100311033
284 Ga0070708_100312555
285 Ga0068867_100006241
286 Ga0070706_100000819
287 Ga0070706_100187801
288 Ga0070707_100094410
289 Ga0070707_100118663
290 Ga0070707_100333602
291 Ga0070698_100058545
292 Ga0070684_100033505
293 Ga0070684_100194222
294 Ga0070697_100338188
295 Ga0068853_100050900
296 Ga0070672_100007065
297 Ga0070665_100003369
298 Ga0070664_100426956
299 Ga0070702_100003107
300 Ga0068852_100012609
301 Ga0068852_100365183
302 Ga0068866_10018074
303 Ga0068861_100010349
304 Ga0068870_10149142
305 Ga0068860_100000169
306 Ga0075365_10001007
307 Ga0075365_10024031
308 Ga0075365_10045194
309 Ga0075365_10049786
310 Ga0075365_10123257
311 Ga0075368_10005723
312 Ga0075368_10006249
313 Ga0075363_100014907
314 Ga0075363_100033523
315 Ga0075363_100063501
316 Ga0075363_100074392
317 Ga0075364_10018348
318 Ga0075364_10066599
319 Ga0075364_10067417
320 Ga0075364_10081899
321 Ga0075364_10126729
322 Ga0075362_10004781
323 Ga0075367_10000700
324 Ga0075367_10004629
325 Ga0075367_10024015
326 Ga0075367_10084680
327 Ga0075370_10008965
328 Ga0075370_10133911
329 Ga0075428_100173005
330 Ga0111539_10576817
331 Ga0105245_10208624
332 Ga0105243_10006079
333 Ga0105243_10066871
334 Ga0105242_10097027
335 Ga0105238_10247181
336 Ga0105249_10024275
337 Ga0105239_10025240
338 Ga0105246_10117073
339 Ga0157369_10163384
340 Ga0157375_10112875
341 Ga0157375_10560064
342 Ga0157375_10670407
343 Ga0163163_10382454
344 Ga0157380_10032697
345 Ga0157380_10040195
346 Ga0157380_10197263
347 Ga0157377_10011988
348 Ga0207688_10080330
349 Ga0207643_10010300
350 Ga0207684_10010115
351 Ga0207684_10130220
352 Ga0207662_10011755
353 Ga0207646_10093216
354 Ga0207646_10320079
355 Ga0207694_10213056
356 Ga0207706_10122991
357 Ga0207709_10022304
358 Ga0207709_10032500
359 Ga0207691_10006276
360 Ga0207661_10044806
361 Ga0207679_10209937
362 Ga0207712_10020168
363 Ga0207708_10002950
364 Ga0207708_10003867
365 Ga0207708_10204880
366 Ga0207648_10009642
367 Ga0207675_100002005
368 Ga0207683_10073905
369 Ga0207698_10016560
370 Ga0207698_10095469
371 Ga0209813_10003907
372 Ga0207428_10036706
373 Ga0268266_10002119
374 Ga0268264_10001886
375 Ga0307410_10189499
376 Ga0307407_10014069
377 Ga0307407_10038864
378 Ga0307407_10119327
379 Ga0307409_100057736
380 Ga0307409_100079377
381 Ga0307409_100144558
382 Ga0307416_100002005
383 Ga0307416_100019120
384 Ga0307416_100346301
385 Ga0307414_10123116
386 Ga0307414_10439141
387 Ga0307411_10046733
388 Ga0307411_10083575
389 Ga0307415_100011357
390 Ga0307415_100048509
391 Ga0373932_0084630
392 Ga0395901_0268750
393 Ga0242420_025685
394 Ga0436365_0342481
395 Ga0451795_1476942
396 Ga0451843_0923534
397 Ga0451853_1399622
398 Ga0466972_0030807
399 Ga0466966_0002880
400 Ga0466966_0024210
401 Ga0466961_0014284
402 Ga0466961_0027818
403 Ga0466961_0061420
404 Ga0466963_0014339
405 Ga0466963_0122703
406 Ga0466971_0021910
407 Ga0466971_0046014
408 Ga0466970_0013833
409 Ga0466957_0026840
410 Ga0466957_0082096
411 Ga0466960_0000721
412 Ga0451576_0266162
413 Ga0466958_0023634
414 Ga0466967_0103471
415 Ga0466967_0157385
416 Ga0495641_0060075
417 Ga0495581_0125305
418 Ga0496100_0081261
419 Ga0496100_0138273
420 Ga0496101_0008846
421 Ga0496102_0019823
422 Ga0496102_0053756
423 Ga0496102_0170634
424 Ga0496103_0007499
425 Ga0496104_0009522
426 Ga0496104_0354864
427 Ga0496105_0000226
428 Ga0496105_0128823
429 Ga0496106_0007168
430 Ga0496106_0030350
431 Ga0496107_0019973
432 Ga0496107_0243708
433 Ga0496108_0050217
434 Ga0496108_0069046
435 Ga0496108_0215926
436 Ga0496108_0264971
437 Ga0496108_0405450
438 Ga0496110_0029345
439 Ga0496110_0040660
440 Ga0496110_0051334
441 Ga0496113_0064738
442 Ga0496113_0113606
443 Ga0496114_0016219
444 Ga0496114_0089075
445 Ga0496114_0097507
446 Ga0496114_0306103
447 Ga0496115_0003002
448 Ga0496115_0124358
449 Ga0501031_0013949
450 Ga0501031_0163636
451 Ga0501032_0020479
452 Ga0501032_0038387
453 Ga0501033_0269144
454 Ga0501036_0079939
455 Ga0501036_0098177
456 Ga0501036_0388454
457 Ga0501037_0006270
458 Ga0501038_0060784
459 Ga0501039_0004308
460 Ga0501039_0053923
461 Ga0501039_0120235
462 Ga0501040_0013756
463 Ga0501042_0014938
464 Ga0501042_0081891
465 Ga0501048_0005058
466 Ga0501048_0028321
467 Ga0501048_0317114
468 Ga0501067_0005523
469 Ga0501067_0048121
470 Ga0501067_0113567
471 Ga0501067_0127776
472 Ga0501068_0144532
473 Ga0501069_0022512
474 Ga0501069_0023071
475 Ga0501069_0162200
476 Ga0501071_0004914
477 Ga0501071_0027029
478 Ga0501071_0160875
479 Ga0501071_0327943
480 Ga0501072_0008354
481 Ga0501072_0065371
482 Ga0501072_0077549
483 Ga0501073_0274434
484 Ga0501074_0083522
485 Ga0501074_0142468
486 Ga0501074_0393025
487 Ga0501075_0014239
488 Ga0501075_0081044
489 Ga0501076_0012417
490 Ga0501076_0038459
491 Ga0501076_0172587
492 Ga0501077_0002870
493 Ga0501077_0020332
494 Ga0501079_0002009
495 Ga0501079_0132887
496 Ga0501079_0423485
497 Ga0501080_0027366
498 Ga0501081_0078130
499 Ga0501035_0097746
500 Ga0501045_0009662
501 Ga0501045_0380418
502 nmdc:mga03n38_16094_c1
503 nmdc:mga03n38_3001_c1
504 nmdc:mga00v17_198151_c1
505 nmdc:mga00v17_215669_c1
506 nmdc:mga00v17_27643_c1
507 nmdc:mga00v17_49061_c1
508 nmdc:mga00v17_57165_c1
509 nmdc:mga0yw44_182363_c1
510 nmdc:mga0yw44_24495_c1
511 nmdc:mga0yw44_2608_c1
512 nmdc:mga06z11_173448_c1
513 nmdc:mga06z11_29855_c1
514 nmdc:mga06z11_3548_c1
515 nmdc:mga06z11_52491_c1
516 nmdc:mga06z11_53384_c1
517 nmdc:mga07m45_5029_c1
518 nmdc:mga07m45_57380_c1
519 Ga0495619_0111911
520 Ga0500644_0000034
521 Ga0500556_0003065
522 Ga0500593_001981
523 Ga0500573_0032066
524 Ga0501084_0019474
525 Ga0501082_0238465
526 Ga0501082_0274713
527 Ga0530510_0082500
528 Ga0530510_0179753
529 Ga0530510_0375438
530 2644092273
531 2644231780
532 2644322076
533 2855391080
534 8054611756

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01553

Acyltransferase

Acyltransferase

109

271

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kym-assembly1.cif.gz_A crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.7053 44 328
5kym-assembly1.cif.gz_A crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.6831 44 328
5kym-assembly2.cif.gz_B crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.6667 49 328
5kym-assembly2.cif.gz_B crystal structure of the 1-acyl-sn-glycerophosphate (lpa) acyltransferase, plsc, from thermotoga maritima 0.6499 49 328
5knk-assembly1.cif.gz_B-2 lipid a secondary acyltransferase lpxm from acinetobacter baumannii with catalytic residue substitution (e127a) 0.5685 85 328
ID Description Score Start End Superfamily
af_Q54IG1_194_345_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8175 124 259 3.40.50.620
af_Q22267_77_205_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.757 115 269 3.40.50.2000
af_Q7KTI0_75_205_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7569 120 269 3.40.50.620
af_Q54IT8_79_243_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.7458 123 269 3.40.50.620
af_P38226_103_282_3.30.70.330 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;RRM (RNA recognition motif) domain 0.7386 124 269 3.30.70.330
ID Description Score Start End GO Terms
AF-A0A2E2PYV5-F1-model_v4 Glycerol acyltransferase 0.9465 2 330 GO:0003841
GO:0012505
GO:0016020
AF-N0E1R0-F1-model_v4 Phospholipid/glycerol acyltransferase 0.9429 3 332 GO:0012505
GO:0016020
GO:0016746
AF-A0A3N1A1J8-F1-model_v4 Acyltransferase-like protein 0.9422 3 329 GO:0016020
GO:0016746
AF-A0A5M3XW05-F1-model_v4 Acyltransferase 0.9303 3 329 GO:0003841
GO:0012505
GO:0016020
AF-A0A0Q7K758-F1-model_v4 Glycerol acyltransferase 0.9302 4 330 GO:0016020
GO:0016746

Map