F374911

General Info

Members Datasets Scaffolds Average Seq Length
267 191 534 245

Family's Representative Sequence

Representative Sequence 3300035111|Ga0373923_0022004|Ga0373923_0022004_281_1099
Length 272
Sequence LSTPSPASARDASKAQPRRLRTLIGLFIPAVIVFAVLVALGTWQLQRKAWKEDLIATLTERLAAPPGALPAPATWPRLDRDDTEYRRVTFTATFDDGKEALVYAAASAFRPDVSGPGYWVFTPARLTDGSVVMVNRGFVPQDLANPAARPGGHMNGPIQITGTLRWPDSRSWFSPGDDPAHNLWFLRDPASIAVAKGLKEVAPFYVEQEAPAPPGGLPQPGKLEVRLRNEHLQYVVTWYGLALVLAVVFAVWARSSLRGAGKARESGISSLE

Samples

Sample ID Description Type Environment
1 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
18 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
37 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
64 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
65 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
66 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
95 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
98 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
102 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
103 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
104 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
105 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
106 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
107 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
108 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
109 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
110 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
111 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
112 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
113 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
114 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
115 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
122 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
123 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
124 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
125 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
130 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
131 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
132 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
133 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
134 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
135 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
136 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
137 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
138 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
146 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
147 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
148 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
156 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
157 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
158 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
159 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
176 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
177 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
178 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
185 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
188 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
189 2643221547 Pseudolabrys sp. Root1462 Isolate Unclassified
190 2773857925 Microvirga vignae BR3299 Isolate Unclassified
191 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.88
Metatranscriptomes 0
Isolates 1.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.25
Nodule 0
Rhizoplane 12.36
Rhizosphere 81.27
Stem 0
Stem Tuber 0
Unclassified 3.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373923_0022004 3300035111 Bacteria 2495
2 rootL2_10124440 3300003322 Bacteria 1346
3 Ga0070676_10065200 3300005328 Bacteria 2174
4 Ga0070690_100005410 3300005330 Bacteria 7170
5 Ga0070670_100170213 3300005331 Bacteria 1889
6 Ga0070689_100029097 3300005340 Bacteria 4179
7 Ga0070669_100356853 3300005353 Bacteria 1188
8 Ga0070669_100454662 3300005353 Bacteria 1056
9 Ga0070675_100166718 3300005354 Bacteria 1897
10 Ga0070671_100091750 3300005355 Bacteria 2545
11 Ga0070671_100092662 3300005355 Bacteria 2532
12 Ga0070674_100006011 3300005356 Bacteria 7055
13 Ga0070673_100375759 3300005364 Bacteria 1266
14 Ga0070688_100033082 3300005365 Bacteria 3123
15 Ga0070667_100177500 3300005367 Bacteria 1882
16 Ga0070709_10001609 3300005434 Bacteria 12196
17 Ga0070714_100004017 3300005435 Bacteria 11056
18 Ga0070713_100020109 3300005436 Bacteria 5111
19 Ga0070713_100079709 3300005436 Bacteria 2790
20 Ga0070710_10001963 3300005437 Bacteria 9748
21 Ga0070701_10197532 3300005438 Bacteria 1187
22 Ga0070711_100001405 3300005439 Bacteria 13195
23 Ga0070705_100354963 3300005440 Bacteria 1070
24 Ga0070700_100190710 3300005441 Bacteria 1433
25 Ga0070694_100256128 3300005444 Bacteria 1326
26 Ga0070663_100089413 3300005455 Bacteria 2279
27 Ga0070678_100064919 3300005456 Bacteria 2708
28 Ga0070678_100138929 3300005456 Bacteria 1941
29 Ga0070662_100168957 3300005457 Unclassified 1716
30 Ga0070681_10038879 3300005458 Bacteria 4770
31 Ga0070686_100101925 3300005544 Bacteria 1941
32 Ga0070686_100240617 3300005544 Bacteria 1318
33 Ga0070696_100113999 3300005546 Bacteria 1949
34 Ga0070665_100417649 3300005548 Bacteria 1350
35 Ga0068859_100068264 3300005617 Bacteria 3590
36 Ga0068861_100148847 3300005719 Bacteria 1919
37 Ga0068863_100085355 3300005841 Bacteria 2992
38 Ga0081455_10017975 3300005937 Bacteria 6754
39 Ga0081538_10109911 3300005981 Bacteria 1356
40 Ga0081540_1000284 3300005983 Bacteria 52869
41 Ga0081540_1017585 3300005983 Bacteria 4420
42 Ga0070717_10001153 3300006028 Bacteria 17846
43 Ga0070717_10334881 3300006028 Bacteria 1350
44 Ga0075363_100122983 3300006048 Bacteria 1450
45 Ga0070715_10015000 3300006163 Bacteria 2882
46 Ga0075366_10256184 3300006195 Bacteria 1068
47 Ga0075428_100306855 3300006844 Bacteria 1706
48 Ga0075430_100038547 3300006846 Bacteria 4047
49 Ga0075431_100043216 3300006847 Bacteria 4651
50 Ga0075431_100277223 3300006847 Bacteria 1698
51 Ga0075433_10018205 3300006852 Bacteria 5835
52 Ga0075434_100010514 3300006871 Bacteria 8677
53 Ga0075434_100013290 3300006871 Bacteria 7828
54 Ga0075434_100027026 3300006871 Bacteria 5632
55 Ga0075429_100546647 3300006880 Bacteria 1015
56 Ga0068865_100220109 3300006881 Bacteria 1484
57 Ga0068865_100315759 3300006881 Bacteria 1255
58 Ga0097620_100068264 3300006931 Bacteria 3590
59 Ga0099795_10074127 3300007788 Bacteria 1289
60 Ga0099795_10078480 3300007788 Bacteria 1259
61 Ga0111539_10057398 3300009094 Bacteria 4623
62 Ga0111539_10125726 3300009094 Bacteria 3004
63 Ga0111539_10160679 3300009094 Bacteria 2628
64 Ga0111539_10410654 3300009094 Bacteria 1577
65 Ga0114129_10521562 3300009147 Bacteria 1549
66 Ga0105243_10071914 3300009148 Bacteria 2798
67 Ga0105243_11090281 3300009148 Bacteria 806
68 Ga0105242_10132654 3300009176 Bacteria 2152
69 Ga0105242_10470347 3300009176 Bacteria 1189
70 Ga0105248_10050114 3300009177 Bacteria 4683
71 Ga0105249_10173560 3300009553 Bacteria 2092
72 Ga0105249_10579673 3300009553 Bacteria 1175
73 Ga0099796_10002058 3300010159 Bacteria 4296
74 Ga0105246_10274827 3300011119 Bacteria 1349
75 Ga0157375_10556804 3300013308 Bacteria 1308
76 Ga0163163_10139657 3300014325 Bacteria 2465
77 Ga0163163_10149181 3300014325 Bacteria 2383
78 Ga0157380_10035400 3300014326 Bacteria 3856
79 Ga0157380_10141481 3300014326 Bacteria 2068
80 Ga0182008_10001113 3300014497 Bacteria 18484
81 Ga0182008_10198681 3300014497 Bacteria 1020
82 Ga0157379_10171785 3300014968 Bacteria 1957
83 Ga0157379_10694630 3300014968 Bacteria 955
84 Ga0157376_10150554 3300014969 Bacteria 2098
85 Ga0157376_10251865 3300014969 Bacteria 1650
86 Ga0182006_1098720 3300015261 Bacteria 1040
87 Ga0163161_10544833 3300017792 Bacteria 950
88 Ga0213872_10108520 3300021361 Unclassified 1234
89 Ga0213876_10132062 3300021384 Bacteria 1327
90 Ga0213876_10171354 3300021384 Bacteria 1155
91 Ga0209233_1009398 3300025261 Bacteria 2977
92 Ga0207692_10011280 3300025898 Bacteria 3796
93 Ga0207685_10002239 3300025905 Bacteria 4379
94 Ga0207699_10003878 3300025906 Bacteria 7147
95 Ga0207645_10125834 3300025907 Bacteria 1666
96 Ga0207707_10079470 3300025912 Bacteria 2863
97 Ga0207663_10002810 3300025916 Bacteria 8397
98 Ga0207663_10281991 3300025916 Bacteria 1234
99 Ga0207660_10294308 3300025917 Bacteria 1291
100 Ga0207681_10130596 3300025923 Bacteria 1857
101 Ga0207650_10280127 3300025925 Bacteria 1357
102 Ga0207687_10597490 3300025927 Bacteria 930
103 Ga0207700_10006398 3300025928 Bacteria 7109
104 Ga0207700_10279768 3300025928 Unclassified 1435
105 Ga0207664_10016127 3300025929 Bacteria 5443
106 Ga0207644_10021522 3300025931 Bacteria 4394
107 Ga0207686_10146807 3300025934 Bacteria 1637
108 Ga0207670_10018927 3300025936 Bacteria 4197
109 Ga0207665_10001552 3300025939 Bacteria 15467
110 Ga0207665_10122658 3300025939 Bacteria 1837
111 Ga0207691_10299968 3300025940 Bacteria 1380
112 Ga0207691_10670862 3300025940 Unclassified 875
113 Ga0207711_10065447 3300025941 Bacteria 3142
114 Ga0207651_10174687 3300025960 Bacteria 1698
115 Ga0207712_10138351 3300025961 Bacteria 1865
116 Ga0207658_10266103 3300025986 Bacteria 1463
117 Ga0207708_10046328 3300026075 Bacteria 3311
118 Ga0207641_10120287 3300026088 Bacteria 2342
119 Ga0207676_10131407 3300026095 Bacteria 2129
120 Ga0207675_100096837 3300026118 Bacteria 2778
121 Ga0207683_10016245 3300026121 Bacteria 6333
122 Ga0207683_10086479 3300026121 Bacteria 2787
123 Ga0207428_10017390 3300027907 Bacteria 6173
124 Ga0207428_10228428 3300027907 Bacteria 1393
125 Ga0268266_10475977 3300028379 Bacteria 1190
126 Ga0265340_10034376 3300031247 Bacteria 2521
127 Ga0307513_10014111 3300031456 Bacteria 9780
128 Ga0316576_10030761 3300031727 Bacteria 3804
129 Ga0316578_10004162 3300031728 Bacteria 6777
130 Ga0307516_10461679 3300031730 Bacteria 925
131 Ga0373959_0014687 3300034820 Bacteria 1428
132 Ga0373928_0014522 3300035084 Bacteria 1594
133 Ga0373940_0129088 3300035088 Bacteria 790
134 Ga0373939_0041263 3300035114 Bacteria 1390
135 Ga0373954_0021921 3300035118 Bacteria 2895
136 Ga0373943_0074700 3300035170 Bacteria 1724
137 Ga0373955_0254844 3300035172 Bacteria 1052
138 Ga0373961_0002823 3300035241 Bacteria 4427
139 Ga0373961_0024965 3300035241 Bacteria 1621
140 Ga0373931_0006424 3300035691 Bacteria 5491
141 Ga0373931_0041000 3300035691 Bacteria 2431
142 Ga0373935_0013885 3300035692 Bacteria 4863
143 Ga0373935_0054674 3300035692 Bacteria 2543
144 Ga0373927_0010191 3300035695 Bacteria 6281
145 Ga0373927_0074805 3300035695 Bacteria 2193
146 Ga0373933_0002303 3300035724 Bacteria 10854
147 Ga0373947_0042362 3300035725 Bacteria 2717
148 Ga0373947_0068213 3300035725 Bacteria 2175
149 Ga0373937_0007166 3300036401 Bacteria 9641
150 Ga0373937_0139312 3300036401 Bacteria 2269
151 Ga0316584_0008165 3300036712 Bacteria 7198
152 Ga0373925_0114302 3300037068 Bacteria 2089
153 Ga0373925_0130038 3300037068 Bacteria 1962
154 Ga0373925_0184343 3300037068 Bacteria 1654
155 Ga0395905_0010824 3300037471 Bacteria 8837
156 Ga0436365_1081058 3300039437 Bacteria 1369
157 Ga0436365_1168448 3300039437 Bacteria 2190
158 Ga0436365_1360698 3300039437 Bacteria 1497
159 Ga0436360_0863113 3300039438 Bacteria 4041
160 Ga0436360_0947446 3300039438 Bacteria 1526
161 Ga0436361_0757580 3300039447 Unclassified 1261
162 Ga0439453_0000137 3300041408 Bacteria 6364
163 Ga0439443_000900 3300042003 Bacteria 3009
164 Ga0439460_0023371 3300042461 Bacteria 1704
165 Ga0439440_0021522 3300042993 Bacteria 1454
166 Ga0466972_0029827 3300044658 Bacteria 2686
167 Ga0466957_0008318 3300044842 Bacteria 5899
168 Ga0495592_0006203 3300046454 Bacteria 8888
169 Ga0495629_0018339 3300046459 Bacteria 5009
170 Ga0495638_0022339 3300046460 Bacteria 4154
171 Ga0495651_0000214 3300046462 Bacteria 44308
172 Ga0495651_0630686 3300046462 Bacteria 673
173 Ga0495653_0002809 3300046463 Bacteria 13899
174 Ga0495653_0118284 3300046463 Bacteria 1893
175 Ga0495662_0314089 3300046476 Bacteria 771
176 Ga0495664_0308603 3300046477 Bacteria 955
177 Ga0495664_0434142 3300046477 Bacteria 787
178 Ga0495608_0002236 3300046511 Bacteria 13982
179 Ga0495608_0061521 3300046511 Bacteria 2469
180 Ga0495618_0002115 3300046514 Bacteria 13007
181 Ga0495618_0084673 3300046514 Bacteria 2026
182 Ga0495628_0020265 3300046516 Bacteria 5489
183 Ga0495628_0023526 3300046516 Bacteria 5055
184 Ga0495652_0004436 3300046529 Bacteria 13418
185 Ga0495665_0066336 3300046531 Bacteria 1905
186 Ga0495640_0002953 3300046533 Bacteria 13699
187 Ga0495640_0165506 3300046533 Bacteria 1415
188 Ga0495587_0015896 3300046536 Bacteria 4688
189 Ga0495645_0013273 3300046543 Bacteria 5822
190 Ga0495667_0008439 3300046559 Bacteria 6992
191 Ga0495634_0060253 3300046642 Bacteria 2526
192 Ga0495635_0000562 3300046663 Bacteria 23704
193 Ga0495657_0091712 3300046675 Bacteria 1948
194 Ga0495599_0001324 3300046678 Bacteria 14120
195 Ga0495623_0011056 3300046679 Bacteria 5838
196 Ga0495646_0020201 3300046680 Bacteria 4213
197 Ga0495613_0147802 3300046689 Bacteria 1677
198 Ga0495600_0002979 3300046809 Bacteria 9881
199 Ga0495581_0170764 3300047315 Bacteria 1272
200 Ga0495604_0000382 3300047317 Bacteria 40024
201 Ga0495674_0195579 3300047319 Bacteria 1679
202 Ga0495680_0001240 3300047322 Bacteria 27994
203 Ga0495680_0223557 3300047322 Unclassified 1343
204 Ga0495684_0013473 3300047471 Bacteria 6292
205 Ga0495602_0008396 3300048088 Bacteria 10790
206 Ga0496100_0497587 3300048903 Bacteria 939
207 Ga0496101_0274239 3300048904 Bacteria 1317
208 Ga0496102_0042894 3300048905 Bacteria 4100
209 Ga0496102_0351121 3300048905 Bacteria 1388
210 Ga0496103_0257677 3300048906 Bacteria 1122
211 Ga0496104_0047306 3300048907 Bacteria 4054
212 Ga0496104_0191200 3300048907 Bacteria 1958
213 Ga0496104_0430687 3300048907 Bacteria 1231
214 Ga0496106_0109075 3300048909 Bacteria 2153
215 Ga0496107_0074629 3300048910 Bacteria 2467
216 Ga0496107_0561953 3300048910 Bacteria 845
217 Ga0496108_0010598 3300048911 Bacteria 7478
218 Ga0496108_0553390 3300048911 Bacteria 1004
219 Ga0496109_0047631 3300048912 Bacteria 3898
220 Ga0496109_0088455 3300048912 Bacteria 2862
221 Ga0496109_0260580 3300048912 Bacteria 1633
222 Ga0496109_1070500 3300048912 Bacteria 744
223 Ga0496110_0089724 3300048913 Bacteria 2748
224 Ga0496110_0283433 3300048913 Bacteria 1509
225 Ga0496111_0156322 3300048914 Bacteria 1692
226 Ga0496111_0180745 3300048914 Bacteria 1568
227 Ga0496112_0094859 3300048915 Bacteria 2954
228 Ga0496112_0289697 3300048915 Bacteria 1583
229 Ga0496112_0392603 3300048915 Bacteria 1328
230 Ga0496113_0019385 3300048916 Bacteria 4757
231 Ga0496113_0470669 3300048916 Bacteria 1010
232 Ga0496114_0087779 3300048917 Bacteria 2637
233 Ga0496114_0139414 3300048917 Bacteria 2099
234 Ga0496114_0672618 3300048917 Unclassified 909
235 Ga0496115_0021793 3300048918 Bacteria 4953
236 Ga0496115_0040374 3300048918 Bacteria 3709
237 Ga0496115_0106692 3300048918 Bacteria 2300
238 Ga0496115_0138821 3300048918 Bacteria 2005
239 Ga0501034_0193049 3300049571 Bacteria 1998
240 Ga0501034_0721584 3300049571 Unclassified 894
241 Ga0501048_0185913 3300049582 Bacteria 1473
242 Ga0501074_0284771 3300049590 Bacteria 1175
243 nmdc:mga0k408_53742_c1 3300050493 Bacteria 2334
244 nmdc:mga05p37_563550_c1 3300050507 Bacteria 1294
245 nmdc:mga09592_320770_c1 3300050508 Bacteria 1342
246 nmdc:mga0qj67_105109_c1 3300050509 Bacteria 2278
247 nmdc:mga06r32_70466_c1 3300050510 Bacteria 3381
248 nmdc:mga06r32_822649_c1 3300050510 Bacteria 888
249 nmdc:mga06r32_91269_c2 3300050510 Bacteria 2105
250 nmdc:mga08y16_595013_c1 3300050511 Unclassified 1115
251 nmdc:mga0n895_26142_c1 3300050512 Bacteria 5524
252 nmdc:mga0n895_36768_c1 3300050512 Bacteria 4730
253 nmdc:mga0a205_39455_c1 3300050515 Bacteria 4545
254 Ga0495601_0039077 3300053077 Bacteria 2970
255 Ga0495601_0079998 3300053077 Bacteria 2096
256 Ga0495601_0095759 3300053077 Bacteria 1914
257 Ga0495655_0082141 3300053083 Bacteria 923
258 Ga0495595_0000739 3300053084 Bacteria 12404
259 Ga0495595_0033212 3300053084 Bacteria 2327
260 Ga0495595_0110178 3300053084 Bacteria 1334
261 Ga0495619_0002026 3300053085 Bacteria 13468
262 Ga0495619_0005763 3300053085 Bacteria 7849
263 Ga0500643_056571 3300053087 Bacteria 1109
264 Ga0500641_0058891 3300053096 Bacteria 1596
265 2643758554 2643221547 Bacteria 4740017
266 2774872793 2773857925 Bacteria 6472445
267 2882456959 2882456835 Bacteria 6863978
268 Ga0373923_0022004
269 rootL2_10124440
270 Ga0070676_10065200
271 Ga0070690_100005410
272 Ga0070670_100170213
273 Ga0070689_100029097
274 Ga0070669_100356853
275 Ga0070669_100454662
276 Ga0070675_100166718
277 Ga0070671_100091750
278 Ga0070671_100092662
279 Ga0070674_100006011
280 Ga0070673_100375759
281 Ga0070688_100033082
282 Ga0070667_100177500
283 Ga0070709_10001609
284 Ga0070714_100004017
285 Ga0070713_100020109
286 Ga0070713_100079709
287 Ga0070710_10001963
288 Ga0070701_10197532
289 Ga0070711_100001405
290 Ga0070705_100354963
291 Ga0070700_100190710
292 Ga0070694_100256128
293 Ga0070663_100089413
294 Ga0070678_100064919
295 Ga0070678_100138929
296 Ga0070662_100168957
297 Ga0070681_10038879
298 Ga0070686_100101925
299 Ga0070686_100240617
300 Ga0070696_100113999
301 Ga0070665_100417649
302 Ga0068859_100068264
303 Ga0068861_100148847
304 Ga0068863_100085355
305 Ga0081455_10017975
306 Ga0081538_10109911
307 Ga0081540_1000284
308 Ga0081540_1017585
309 Ga0070717_10001153
310 Ga0070717_10334881
311 Ga0075363_100122983
312 Ga0070715_10015000
313 Ga0075366_10256184
314 Ga0075428_100306855
315 Ga0075430_100038547
316 Ga0075431_100043216
317 Ga0075431_100277223
318 Ga0075433_10018205
319 Ga0075434_100010514
320 Ga0075434_100013290
321 Ga0075434_100027026
322 Ga0075429_100546647
323 Ga0068865_100220109
324 Ga0068865_100315759
325 Ga0097620_100068264
326 Ga0099795_10074127
327 Ga0099795_10078480
328 Ga0111539_10057398
329 Ga0111539_10125726
330 Ga0111539_10160679
331 Ga0111539_10410654
332 Ga0114129_10521562
333 Ga0105243_10071914
334 Ga0105243_11090281
335 Ga0105242_10132654
336 Ga0105242_10470347
337 Ga0105248_10050114
338 Ga0105249_10173560
339 Ga0105249_10579673
340 Ga0099796_10002058
341 Ga0105246_10274827
342 Ga0157375_10556804
343 Ga0163163_10139657
344 Ga0163163_10149181
345 Ga0157380_10035400
346 Ga0157380_10141481
347 Ga0182008_10001113
348 Ga0182008_10198681
349 Ga0157379_10171785
350 Ga0157379_10694630
351 Ga0157376_10150554
352 Ga0157376_10251865
353 Ga0182006_1098720
354 Ga0163161_10544833
355 Ga0213872_10108520
356 Ga0213876_10132062
357 Ga0213876_10171354
358 Ga0209233_1009398
359 Ga0207692_10011280
360 Ga0207685_10002239
361 Ga0207699_10003878
362 Ga0207645_10125834
363 Ga0207707_10079470
364 Ga0207663_10002810
365 Ga0207663_10281991
366 Ga0207660_10294308
367 Ga0207681_10130596
368 Ga0207650_10280127
369 Ga0207687_10597490
370 Ga0207700_10006398
371 Ga0207700_10279768
372 Ga0207664_10016127
373 Ga0207644_10021522
374 Ga0207686_10146807
375 Ga0207670_10018927
376 Ga0207665_10001552
377 Ga0207665_10122658
378 Ga0207691_10299968
379 Ga0207691_10670862
380 Ga0207711_10065447
381 Ga0207651_10174687
382 Ga0207712_10138351
383 Ga0207658_10266103
384 Ga0207708_10046328
385 Ga0207641_10120287
386 Ga0207676_10131407
387 Ga0207675_100096837
388 Ga0207683_10016245
389 Ga0207683_10086479
390 Ga0207428_10017390
391 Ga0207428_10228428
392 Ga0268266_10475977
393 Ga0265340_10034376
394 Ga0307513_10014111
395 Ga0316576_10030761
396 Ga0316578_10004162
397 Ga0307516_10461679
398 Ga0373959_0014687
399 Ga0373928_0014522
400 Ga0373940_0129088
401 Ga0373939_0041263
402 Ga0373954_0021921
403 Ga0373943_0074700
404 Ga0373955_0254844
405 Ga0373961_0002823
406 Ga0373961_0024965
407 Ga0373931_0006424
408 Ga0373931_0041000
409 Ga0373935_0013885
410 Ga0373935_0054674
411 Ga0373927_0010191
412 Ga0373927_0074805
413 Ga0373933_0002303
414 Ga0373947_0042362
415 Ga0373947_0068213
416 Ga0373937_0007166
417 Ga0373937_0139312
418 Ga0316584_0008165
419 Ga0373925_0114302
420 Ga0373925_0130038
421 Ga0373925_0184343
422 Ga0395905_0010824
423 Ga0436365_1081058
424 Ga0436365_1168448
425 Ga0436365_1360698
426 Ga0436360_0863113
427 Ga0436360_0947446
428 Ga0436361_0757580
429 Ga0439453_0000137
430 Ga0439443_000900
431 Ga0439460_0023371
432 Ga0439440_0021522
433 Ga0466972_0029827
434 Ga0466957_0008318
435 Ga0495592_0006203
436 Ga0495629_0018339
437 Ga0495638_0022339
438 Ga0495651_0000214
439 Ga0495651_0630686
440 Ga0495653_0002809
441 Ga0495653_0118284
442 Ga0495662_0314089
443 Ga0495664_0308603
444 Ga0495664_0434142
445 Ga0495608_0002236
446 Ga0495608_0061521
447 Ga0495618_0002115
448 Ga0495618_0084673
449 Ga0495628_0020265
450 Ga0495628_0023526
451 Ga0495652_0004436
452 Ga0495665_0066336
453 Ga0495640_0002953
454 Ga0495640_0165506
455 Ga0495587_0015896
456 Ga0495645_0013273
457 Ga0495667_0008439
458 Ga0495634_0060253
459 Ga0495635_0000562
460 Ga0495657_0091712
461 Ga0495599_0001324
462 Ga0495623_0011056
463 Ga0495646_0020201
464 Ga0495613_0147802
465 Ga0495600_0002979
466 Ga0495581_0170764
467 Ga0495604_0000382
468 Ga0495674_0195579
469 Ga0495680_0001240
470 Ga0495680_0223557
471 Ga0495684_0013473
472 Ga0495602_0008396
473 Ga0496100_0497587
474 Ga0496101_0274239
475 Ga0496102_0042894
476 Ga0496102_0351121
477 Ga0496103_0257677
478 Ga0496104_0047306
479 Ga0496104_0191200
480 Ga0496104_0430687
481 Ga0496106_0109075
482 Ga0496107_0074629
483 Ga0496107_0561953
484 Ga0496108_0010598
485 Ga0496108_0553390
486 Ga0496109_0047631
487 Ga0496109_0088455
488 Ga0496109_0260580
489 Ga0496109_1070500
490 Ga0496110_0089724
491 Ga0496110_0283433
492 Ga0496111_0156322
493 Ga0496111_0180745
494 Ga0496112_0094859
495 Ga0496112_0289697
496 Ga0496112_0392603
497 Ga0496113_0019385
498 Ga0496113_0470669
499 Ga0496114_0087779
500 Ga0496114_0139414
501 Ga0496114_0672618
502 Ga0496115_0021793
503 Ga0496115_0040374
504 Ga0496115_0106692
505 Ga0496115_0138821
506 Ga0501034_0193049
507 Ga0501034_0721584
508 Ga0501048_0185913
509 Ga0501074_0284771
510 nmdc:mga0k408_53742_c1
511 nmdc:mga05p37_563550_c1
512 nmdc:mga09592_320770_c1
513 nmdc:mga0qj67_105109_c1
514 nmdc:mga06r32_70466_c1
515 nmdc:mga06r32_822649_c1
516 nmdc:mga06r32_91269_c2
517 nmdc:mga08y16_595013_c1
518 nmdc:mga0n895_26142_c1
519 nmdc:mga0n895_36768_c1
520 nmdc:mga0a205_39455_c1
521 Ga0495601_0039077
522 Ga0495601_0079998
523 Ga0495601_0095759
524 Ga0495655_0082141
525 Ga0495595_0000739
526 Ga0495595_0033212
527 Ga0495595_0110178
528 Ga0495619_0002026
529 Ga0495619_0005763
530 Ga0500643_056571
531 Ga0500641_0058891
532 2643758554
533 2774872793
534 2882456959

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02104

SURF1

SURF1 family

31

243

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
7w5z-assembly1.cif.gz_h cryo-em structure of tetrahymena thermophila mitochondrial complex iv, composite dimer model 0.753 20 181
8b6h-assembly1.cif.gz_Dw cryo-em structure of cytochrome c oxidase dimer (complex iv) from respiratory supercomplex of tetrahymena thermophila 0.643 8 224
8gym-assembly1.cif.gz_d cryo-em structure of tetrahymena thermophila respiratory mega-complex mc iv2+(i+iii2+ii)2 0.6337 6 224
4dk3-assembly2.cif.gz_D-2 structure of editosome protein 0.61 65 142
7w5z-assembly1.cif.gz_d cryo-em structure of tetrahymena thermophila mitochondrial complex iv, composite dimer model 0.6029 6 224
ID Description Score Start End Superfamily
af_A0A1D6J4N9_1_138_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6949 77 113 3.30.420.10
af_A0A1D6Q631_9_101_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.688 67 107 2.40.50.140
af_A0A0R0HDM6_300_461_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6731 70 113 3.30.420.10
af_A0A1D6MEG7_37_119_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.6507 65 112 2.40.50.140
af_A0A0G2KYX9_50_268_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.6262 77 114 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A7Y6B6N0-F1-model_v4 SURF1-like protein 0.9437 1 228 GO:0005886
AF-A0A6N6VHQ6-F1-model_v4 SURF1-like protein 0.9386 8 229 GO:0005886
AF-A0A5C7NSG5-F1-model_v4 deleted 0.933 8 225
AF-A0A3B0RAD9-F1-model_v4 Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion 0.9302 8 222 GO:0016020
AF-A0A853HSF5-F1-model_v4 deleted 0.9251 20 229

Map