F374652

General Info

Members Datasets Scaffolds Average Seq Length
267 180 534 522

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100079007|Ga0068859_1000790073
Length 487
Sequence MLHSLRSLRGMVTAPHHLASQAGLAVLRDGGTAIEAAVAVAATLAVVYPHMTGIGGDGFWLIAEADGRTHAVSACGGAAAAADLDLYRGLDAVPWRGPLAANTVAGTISGWEAVLATGRSTLPLERLLRDAIHHAEAGVAVTRGGAEIGQAKGGELRGLPGAWARSFEPGGRSLREGEVLRQKVLGETLRRLATDGLAGFYDGALAADRPEPLSVGIAGATLFNLTPPTQGLASLLILALFDRLEARDAESFAHVHGLVEATKQAFLVRDAHVGDPAYMTIDPQAPAHALPWPQPGQAGDTCWFAIADGEGQVVSAIQSIYFEFGSGLVLPRTGIVWQNRGASFRLAEAGWNALSPGRKPFHTLNPALARFADGRVMAYGTMGGEGQPQTQAALFSRYARFGVDLQDAITRPRWLLGRTWGEASTSLKIEERFDPALYDALRAAGHQVELLAPFTATMGHAGAIVRHPDGMLEGATDPRSDGAVAAW

Samples

Sample ID Description Type Environment
1 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
8 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
9 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
10 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
11 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
12 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
16 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
49 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
52 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
87 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
90 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
91 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
92 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
93 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
94 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
95 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
96 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
97 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
98 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
99 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
100 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
101 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
102 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
103 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
104 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
105 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
106 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
107 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
108 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
111 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
112 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
113 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
116 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
117 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
118 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
121 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
122 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
123 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
126 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
127 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
128 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
129 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
130 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
135 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
136 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
137 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
138 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
139 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
140 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
141 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
142 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
143 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
144 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
147 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
148 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
149 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
150 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
151 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
152 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
153 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
154 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
155 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
156 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
157 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
158 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
159 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
160 2738541275 Novosphingobium sp. GV027 Isolate Unclassified
161 2738541301 Novosphingobium sp. GV079 Isolate Unclassified
162 2738541304 Novosphingobium sp. GV061 Isolate Unclassified
163 2738543022 Novosphingobium sp. GV055 Isolate Unclassified
164 2738543033 Novosphingobium sp. GV064 Isolate Unclassified
165 2739367664 Novosphingobium sp. GV002 Isolate Unclassified
166 2739367865 Novosphingobium sp. GV013 Isolate Unclassified
167 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
168 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
169 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
170 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
171 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
172 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
173 2818991457 Xanthomonas translucens 569 Isolate Unclassified
174 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
175 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
176 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
177 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
178 2928100450 Novosphingobium sp. 1529 Isolate Rhizosphere
179 2928959182 Novosphingobium capsulatum 1057 Isolate Unclassified
180 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.01
Metatranscriptomes 0
Isolates 8.99

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.48
Nodule 0
Rhizoplane 0.37
Rhizosphere 69.66
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068859_100079007 3300005617 Bacteria 3330
2 SwRhRL2b_contig_2235436 2162886007 Bacteria 72815
3 JGI24740J21852_10002577 3300001979 Bacteria 8168
4 JGI24739J22299_10001624 3300001989 Bacteria 8534
5 JGI24739J22299_10004388 3300001989 Bacteria 5401
6 JGI24737J22298_10001573 3300001990 Bacteria 8127
7 JGI24735J21928_10000479 3300002067 Bacteria 14069
8 JGI24735J21928_10003987 3300002067 Bacteria 4995
9 JGI24738J21930_10001414 3300002075 Bacteria 6656
10 JGI24749J21850_1000001 3300002076 Bacteria 67089
11 JGI24751J29686_10000086 3300002459 Bacteria 52241
12 JGI25165J46597_1000071 3300003214 Bacteria 193222
13 JGI25153J46596_10000005 3300003215 Bacteria 492839
14 Ga0065704_10070176 3300005289 Bacteria 138803
15 Ga0070658_10016910 3300005327 Bacteria 5838
16 Ga0070670_100000003 3300005331 Bacteria 529510
17 Ga0070670_100041063 3300005331 Bacteria 3976
18 Ga0070670_100073292 3300005331 Bacteria 2941
19 Ga0070666_10039263 3300005335 Bacteria 3154
20 Ga0070660_100001127 3300005339 Bacteria 18023
21 Ga0070661_100005207 3300005344 Bacteria 8953
22 Ga0070668_100000739 3300005347 Bacteria 22344
23 Ga0070668_100008702 3300005347 Bacteria 7538
24 Ga0070669_100000084 3300005353 Bacteria 91046
25 Ga0070669_100000393 3300005353 Bacteria 33445
26 Ga0070671_100024274 3300005355 Bacteria 4963
27 Ga0070667_100000112 3300005367 Bacteria 104843
28 Ga0070667_100000162 3300005367 Bacteria 83150
29 Ga0070667_100000174 3300005367 Bacteria 79730
30 Ga0070667_100000453 3300005367 Bacteria 42432
31 Ga0070667_100009649 3300005367 Bacteria 8007
32 Ga0070678_100022641 3300005456 Bacteria 4169
33 Ga0070662_100005787 3300005457 Bacteria 7922
34 Ga0070679_100081605 3300005530 Bacteria 3223
35 Ga0068853_100135880 3300005539 Bacteria 2204
36 Ga0068853_100149336 3300005539 Bacteria 2102
37 Ga0070665_100000150 3300005548 Bacteria 127885
38 Ga0068855_100000029 3300005563 Bacteria 171278
39 Ga0068857_100029241 3300005577 Bacteria 4863
40 Ga0068854_100007938 3300005578 Bacteria 6794
41 Ga0068852_100099071 3300005616 Bacteria 2626
42 Ga0068859_100010523 3300005617 Bacteria 9309
43 Ga0068864_100000005 3300005618 Bacteria 400840
44 Ga0068851_10003946 3300005834 Bacteria 6640
45 Ga0068863_100000047 3300005841 Bacteria 140249
46 Ga0068863_100001506 3300005841 Bacteria 23038
47 Ga0068863_100008711 3300005841 Bacteria 9911
48 Ga0068858_100000093 3300005842 Bacteria 93236
49 Ga0068860_100000125 3300005843 Bacteria 123363
50 Ga0068860_100010908 3300005843 Bacteria 8960
51 Ga0068860_100062494 3300005843 Bacteria 3538
52 Ga0068862_100000001 3300005844 Bacteria 523031
53 Ga0068862_100000774 3300005844 Bacteria 31818
54 Ga0068862_100015582 3300005844 Bacteria 6314
55 Ga0097620_100010522 3300006931 Bacteria 9309
56 Ga0097620_100079007 3300006931 Bacteria 3330
57 Ga0105251_10000694 3300009011 Bacteria 31101
58 Ga0105245_10001260 3300009098 Bacteria 22888
59 Ga0105243_10083846 3300009148 Bacteria 2608
60 Ga0105241_10061838 3300009174 Bacteria 2885
61 Ga0105248_10000222 3300009177 Bacteria 65122
62 Ga0105248_10038769 3300009177 Bacteria 5334
63 Ga0105249_10000072 3300009553 Bacteria 146435
64 Ga0157369_10007871 3300013105 Bacteria 12254
65 Ga0157374_10071711 3300013296 Bacteria 3267
66 Ga0163162_10001307 3300013306 Bacteria 23298
67 Ga0163162_10332515 3300013306 Bacteria 1652
68 Ga0163163_10108567 3300014325 Bacteria 2802
69 Ga0157380_10001122 3300014326 Bacteria 17262
70 Ga0182005_1003038 3300015265 Bacteria 5797
71 Ga0163161_10000452 3300017792 Bacteria 34028
72 Ga0163161_10000544 3300017792 Bacteria 30601
73 Ga0163161_10016234 3300017792 Bacteria 5196
74 Ga0209437_106793 3300025233 Bacteria 1891
75 Ga0209148_1000061 3300025254 Bacteria 349575
76 Ga0209233_1000140 3300025261 Bacteria 193274
77 Ga0209758_1000001 3300025297 Bacteria 1981790
78 Ga0207713_1012178 3300025735 Bacteria 4622
79 Ga0207647_10000803 3300025904 Bacteria 24356
80 Ga0207647_10001763 3300025904 Bacteria 16610
81 Ga0207705_10026952 3300025909 Bacteria 4096
82 Ga0207695_10001350 3300025913 Bacteria 41584
83 Ga0207671_10020748 3300025914 Bacteria 4998
84 Ga0207657_10010735 3300025919 Bacteria 9119
85 Ga0207681_10000005 3300025923 Bacteria 555724
86 Ga0207681_10000062 3300025923 Bacteria 99856
87 Ga0207694_10000723 3300025924 Bacteria 29675
88 Ga0207650_10000004 3300025925 Bacteria 743372
89 Ga0207650_10054234 3300025925 Bacteria 2973
90 Ga0207687_10073182 3300025927 Bacteria 2453
91 Ga0207644_10000348 3300025931 Bacteria 30000
92 Ga0207706_10002524 3300025933 Bacteria 17863
93 Ga0207706_10117812 3300025933 Bacteria 2336
94 Ga0207709_10009183 3300025935 Bacteria 5447
95 Ga0207709_10092085 3300025935 Bacteria 1984
96 Ga0207669_10047041 3300025937 Bacteria 2553
97 Ga0207711_10000199 3300025941 Bacteria 64399
98 Ga0207711_10002295 3300025941 Bacteria 17157
99 Ga0207667_10000035 3300025949 Bacteria 301056
100 Ga0207667_10020079 3300025949 Bacteria 7440
101 Ga0207712_10000055 3300025961 Bacteria 146438
102 Ga0207668_10000232 3300025972 Bacteria 37304
103 Ga0207658_10000127 3300025986 Bacteria 83164
104 Ga0207658_10000165 3300025986 Bacteria 70667
105 Ga0207658_10000461 3300025986 Bacteria 38068
106 Ga0207658_10000620 3300025986 Bacteria 31373
107 Ga0207658_10007015 3300025986 Bacteria 7672
108 Ga0207703_10000241 3300026035 Bacteria 62119
109 Ga0207639_10004114 3300026041 Bacteria 9809
110 Ga0207702_10001304 3300026078 Bacteria 24989
111 Ga0207641_10000079 3300026088 Bacteria 141110
112 Ga0207641_10000956 3300026088 Bacteria 29693
113 Ga0207641_10001857 3300026088 Bacteria 20285
114 Ga0207641_10026977 3300026088 Bacteria 4744
115 Ga0207676_10000006 3300026095 Bacteria 681936
116 Ga0207674_10015230 3300026116 Bacteria 8460
117 Ga0207675_100000349 3300026118 Bacteria 44097
118 Ga0207683_10008681 3300026121 Bacteria 8688
119 Ga0207698_10022504 3300026142 Bacteria 4381
120 Ga0268266_10000124 3300028379 Bacteria 153051
121 Ga0268265_10000001 3300028380 Bacteria 1230727
122 Ga0268265_10000741 3300028380 Bacteria 31836
123 Ga0268264_10000166 3300028381 Bacteria 146960
124 Ga0268264_10000767 3300028381 Bacteria 35593
125 Ga0268264_10014719 3300028381 Bacteria 6427
126 Ga0268264_10075607 3300028381 Bacteria 2864
127 Ga0307513_10018516 3300031456 Bacteria 8317
128 Ga0307508_10000126 3300031616 Bacteria 91143
129 Ga0307414_10001747 3300032004 Bacteria 11271
130 Ga0395901_0031532 3300038443 Bacteria 5466
131 Ga0439448_0001017 3300042005 Bacteria 7005
132 Ga0439455_0000178 3300042012 Bacteria 7325
133 Ga0439455_0018824 3300042012 Bacteria 1623
134 Ga0439458_0006315 3300042157 Bacteria 2642
135 Ga0466972_0000305 3300044658 Bacteria 28977
136 Ga0466964_0004635 3300044706 Bacteria 5084
137 Ga0466960_0006918 3300044901 Bacteria 4574
138 Ga0495627_001472 3300046453 Bacteria 13699
139 Ga0495627_008912 3300046453 Bacteria 3716
140 Ga0495638_0000097 3300046460 Bacteria 141017
141 Ga0495650_0000507 3300046471 Bacteria 58153
142 Ga0495650_0004993 3300046471 Bacteria 8827
143 Ga0495585_0034810 3300046492 Bacteria 2847
144 Ga0495596_0000042 3300046500 Bacteria 90746
145 Ga0495596_0009200 3300046500 Bacteria 4355
146 Ga0495606_0045695 3300046507 Bacteria 2900
147 Ga0495610_0000044 3300046512 Bacteria 156847
148 Ga0495610_0002233 3300046512 Bacteria 16386
149 Ga0495610_0005028 3300046512 Bacteria 9561
150 Ga0495610_0020988 3300046512 Bacteria 3605
151 Ga0495620_0037947 3300046515 Bacteria 2141
152 Ga0495632_0000001 3300046519 Bacteria 873295
153 Ga0495632_0001216 3300046519 Bacteria 21835
154 Ga0495632_0020482 3300046519 Bacteria 3580
155 Ga0495632_0059808 3300046519 Bacteria 1853
156 Ga0495632_0066370 3300046519 Bacteria 1741
157 Ga0495637_0000065 3300046520 Bacteria 89961
158 Ga0495643_0000006 3300046522 Bacteria 419524
159 Ga0495643_0000023 3300046522 Bacteria 288590
160 Ga0495643_0023888 3300046522 Bacteria 3470
161 Ga0495648_0000024 3300046524 Bacteria 235605
162 Ga0495663_0000001 3300046525 Bacteria 595264
163 Ga0495609_0006904 3300046538 Bacteria 5730
164 Ga0495597_0015829 3300046542 Bacteria 3568
165 Ga0495633_0000053 3300046558 Bacteria 152374
166 Ga0495633_0004208 3300046558 Bacteria 9221
167 Ga0495668_0045301 3300046616 Bacteria 2445
168 Ga0495668_0097441 3300046616 Bacteria 1609
169 Ga0495611_0022077 3300046648 Bacteria 2753
170 Ga0495625_0000309 3300046660 Bacteria 74356
171 Ga0495625_0017831 3300046660 Bacteria 5549
172 Ga0495625_0079252 3300046660 Bacteria 2291
173 Ga0495669_0030044 3300046684 Bacteria 2385
174 Ga0495671_0000008 3300046692 Bacteria 419524
175 Ga0495687_000045 3300047443 Bacteria 211968
176 Ga0495681_0000014 3300047470 Bacteria 184395
177 Ga0495686_0001338 3300047472 Bacteria 27578
178 Ga0495686_0004607 3300047472 Bacteria 11227
179 Ga0495686_0053500 3300047472 Bacteria 2530
180 Ga0495615_0000058 3300048090 Bacteria 34505
181 Ga0495626_0002119 3300048091 Bacteria 14403
182 Ga0496116_0000060 3300048919 Bacteria 272219
183 Ga0496116_0046028 3300048919 Bacteria 2948
184 Ga0496116_0055185 3300048919 Bacteria 2611
185 Ga0496117_0013660 3300048920 Bacteria 7065
186 Ga0496117_0040314 3300048920 Bacteria 3436
187 Ga0496118_0018283 3300048921 Bacteria 6329
188 Ga0496118_0057989 3300048921 Bacteria 2898
189 Ga0496118_0060328 3300048921 Bacteria 2817
190 Ga0496119_0021333 3300048922 Bacteria 4686
191 Ga0496122_0000221 3300048925 Bacteria 127004
192 Ga0496122_0001615 3300048925 Bacteria 35217
193 Ga0496122_0002045 3300048925 Bacteria 29940
194 Ga0496122_0004006 3300048925 Bacteria 18770
195 Ga0496122_0024168 3300048925 Bacteria 5325
196 Ga0496123_0000756 3300048926 Bacteria 52284
197 Ga0496123_0000833 3300048926 Bacteria 49467
198 Ga0496123_0001983 3300048926 Bacteria 26520
199 Ga0496123_0018626 3300048926 Bacteria 5510
200 Ga0496124_0000009 3300048927 Bacteria 734820
201 Ga0496124_0000728 3300048927 Bacteria 53915
202 Ga0496125_0009857 3300048928 Bacteria 9719
203 Ga0496125_0025451 3300048928 Bacteria 5418
204 Ga0496125_0028564 3300048928 Bacteria 5034
205 Ga0496125_0033880 3300048928 Bacteria 4511
206 Ga0496125_0078569 3300048928 Bacteria 2535
207 Ga0496125_0084254 3300048928 Bacteria 2415
208 Ga0496126_0000305 3300048929 Bacteria 104394
209 Ga0496126_0077566 3300048929 Bacteria 2945
210 Ga0496126_0084307 3300048929 Bacteria 2803
211 Ga0501036_0128783 3300049572 Bacteria 2137
212 Ga0501047_0001086 3300049581 Bacteria 27130
213 Ga0501044_0038333 3300049823 Bacteria 5005
214 Ga0500643_000170 3300053087 Bacteria 63864
215 Ga0500643_000410 3300053087 Bacteria 32725
216 Ga0500555_016001 3300053103 Bacteria 2162
217 Ga0500556_0000408 3300053104 Bacteria 31362
218 Ga0500556_0001144 3300053104 Bacteria 12950
219 Ga0500562_003809 3300053108 Bacteria 3798
220 Ga0500608_000917 3300053122 Bacteria 10616
221 Ga0500614_011107 3300053123 Bacteria 1944
222 Ga0500618_003726 3300053125 Bacteria 5114
223 Ga0500642_0000001 3300053130 Bacteria 1468402
224 Ga0500655_002148 3300053133 Bacteria 3645
225 Ga0500658_0006880 3300053134 Bacteria 4208
226 Ga0500564_041375 3300053138 Bacteria 2120
227 Ga0500573_0000039 3300053140 Bacteria 105413
228 Ga0500577_0011316 3300053142 Bacteria 2658
229 Ga0500590_031632 3300053148 Bacteria 2743
230 Ga0500616_0013118 3300053153 Bacteria 4824
231 Ga0500622_0016025 3300053156 Bacteria 4008
232 Ga0500622_0017467 3300053156 Bacteria 3817
233 Ga0500622_0041957 3300053156 Bacteria 2379
234 Ga0500624_000006 3300053157 Bacteria 184937
235 Ga0500624_000008 3300053157 Bacteria 181801
236 Ga0500624_000071 3300053157 Bacteria 58740
237 Ga0500639_025467 3300053163 Bacteria 3128
238 Ga0500636_0003185 3300053177 Bacteria 9189
239 Ga0500637_0000037 3300053178 Bacteria 47475
240 Ga0500570_024422 3300053724 Bacteria 3330
241 Ga0500625_000001 3300053729 Bacteria 395993
242 Ga0500645_000001 3300053730 Bacteria 455558
243 Ga0500645_001150 3300053730 Bacteria 14291
244 2511130969 2510917021 Bacteria 5705459
245 2585260255 2582581305 Bacteria 4895574
246 2600202797 2599185354 Bacteria 4398675
247 2738710204 2738541275 Bacteria 4830863
248 2738848629 2738541301 Bacteria 4834102
249 2738864358 2738541304 Bacteria 4833665
250 2739296876 2738543022 Bacteria 4835059
251 2739358554 2738543033 Bacteria 4833336
252 2739648922 2739367664 Bacteria 4114334
253 2740027395 2739367865 Bacteria 4114482
254 2748020001 2747842501 Bacteria 5293829
255 2753767145 2751185897 Bacteria 5322941
256 2809063890 2808606401 Bacteria 4586670
257 2809079858 2808606404 Bacteria 4652788
258 2809084223 2808606405 Bacteria 4586632
259 2819551939 2818991438 Bacteria 5793701
260 2819661035 2818991457 Bacteria 5323295
261 2842780920 2842780639 Bacteria 4337790
262 2852686895 2852684882 Bacteria 5463342
263 2880523423 2880518877 Bacteria 5012590
264 2919139281 2919138771 Bacteria 5281312
265 2928101849 2928100450 Bacteria 4837635
266 2928959941 2928959182 Bacteria 4725774
267 8054306224 8054302542 Bacteria 5698134
268 Ga0068859_100079007
269 SwRhRL2b_contig_2235436
270 JGI24740J21852_10002577
271 JGI24739J22299_10001624
272 JGI24739J22299_10004388
273 JGI24737J22298_10001573
274 JGI24735J21928_10000479
275 JGI24735J21928_10003987
276 JGI24738J21930_10001414
277 JGI24749J21850_1000001
278 JGI24751J29686_10000086
279 JGI25165J46597_1000071
280 JGI25153J46596_10000005
281 Ga0065704_10070176
282 Ga0070658_10016910
283 Ga0070670_100000003
284 Ga0070670_100041063
285 Ga0070670_100073292
286 Ga0070666_10039263
287 Ga0070660_100001127
288 Ga0070661_100005207
289 Ga0070668_100000739
290 Ga0070668_100008702
291 Ga0070669_100000084
292 Ga0070669_100000393
293 Ga0070671_100024274
294 Ga0070667_100000112
295 Ga0070667_100000162
296 Ga0070667_100000174
297 Ga0070667_100000453
298 Ga0070667_100009649
299 Ga0070678_100022641
300 Ga0070662_100005787
301 Ga0070679_100081605
302 Ga0068853_100135880
303 Ga0068853_100149336
304 Ga0070665_100000150
305 Ga0068855_100000029
306 Ga0068857_100029241
307 Ga0068854_100007938
308 Ga0068852_100099071
309 Ga0068859_100010523
310 Ga0068864_100000005
311 Ga0068851_10003946
312 Ga0068863_100000047
313 Ga0068863_100001506
314 Ga0068863_100008711
315 Ga0068858_100000093
316 Ga0068860_100000125
317 Ga0068860_100010908
318 Ga0068860_100062494
319 Ga0068862_100000001
320 Ga0068862_100000774
321 Ga0068862_100015582
322 Ga0097620_100010522
323 Ga0097620_100079007
324 Ga0105251_10000694
325 Ga0105245_10001260
326 Ga0105243_10083846
327 Ga0105241_10061838
328 Ga0105248_10000222
329 Ga0105248_10038769
330 Ga0105249_10000072
331 Ga0157369_10007871
332 Ga0157374_10071711
333 Ga0163162_10001307
334 Ga0163162_10332515
335 Ga0163163_10108567
336 Ga0157380_10001122
337 Ga0182005_1003038
338 Ga0163161_10000452
339 Ga0163161_10000544
340 Ga0163161_10016234
341 Ga0209437_106793
342 Ga0209148_1000061
343 Ga0209233_1000140
344 Ga0209758_1000001
345 Ga0207713_1012178
346 Ga0207647_10000803
347 Ga0207647_10001763
348 Ga0207705_10026952
349 Ga0207695_10001350
350 Ga0207671_10020748
351 Ga0207657_10010735
352 Ga0207681_10000005
353 Ga0207681_10000062
354 Ga0207694_10000723
355 Ga0207650_10000004
356 Ga0207650_10054234
357 Ga0207687_10073182
358 Ga0207644_10000348
359 Ga0207706_10002524
360 Ga0207706_10117812
361 Ga0207709_10009183
362 Ga0207709_10092085
363 Ga0207669_10047041
364 Ga0207711_10000199
365 Ga0207711_10002295
366 Ga0207667_10000035
367 Ga0207667_10020079
368 Ga0207712_10000055
369 Ga0207668_10000232
370 Ga0207658_10000127
371 Ga0207658_10000165
372 Ga0207658_10000461
373 Ga0207658_10000620
374 Ga0207658_10007015
375 Ga0207703_10000241
376 Ga0207639_10004114
377 Ga0207702_10001304
378 Ga0207641_10000079
379 Ga0207641_10000956
380 Ga0207641_10001857
381 Ga0207641_10026977
382 Ga0207676_10000006
383 Ga0207674_10015230
384 Ga0207675_100000349
385 Ga0207683_10008681
386 Ga0207698_10022504
387 Ga0268266_10000124
388 Ga0268265_10000001
389 Ga0268265_10000741
390 Ga0268264_10000166
391 Ga0268264_10000767
392 Ga0268264_10014719
393 Ga0268264_10075607
394 Ga0307513_10018516
395 Ga0307508_10000126
396 Ga0307414_10001747
397 Ga0395901_0031532
398 Ga0439448_0001017
399 Ga0439455_0000178
400 Ga0439455_0018824
401 Ga0439458_0006315
402 Ga0466972_0000305
403 Ga0466964_0004635
404 Ga0466960_0006918
405 Ga0495627_001472
406 Ga0495627_008912
407 Ga0495638_0000097
408 Ga0495650_0000507
409 Ga0495650_0004993
410 Ga0495585_0034810
411 Ga0495596_0000042
412 Ga0495596_0009200
413 Ga0495606_0045695
414 Ga0495610_0000044
415 Ga0495610_0002233
416 Ga0495610_0005028
417 Ga0495610_0020988
418 Ga0495620_0037947
419 Ga0495632_0000001
420 Ga0495632_0001216
421 Ga0495632_0020482
422 Ga0495632_0059808
423 Ga0495632_0066370
424 Ga0495637_0000065
425 Ga0495643_0000006
426 Ga0495643_0000023
427 Ga0495643_0023888
428 Ga0495648_0000024
429 Ga0495663_0000001
430 Ga0495609_0006904
431 Ga0495597_0015829
432 Ga0495633_0000053
433 Ga0495633_0004208
434 Ga0495668_0045301
435 Ga0495668_0097441
436 Ga0495611_0022077
437 Ga0495625_0000309
438 Ga0495625_0017831
439 Ga0495625_0079252
440 Ga0495669_0030044
441 Ga0495671_0000008
442 Ga0495687_000045
443 Ga0495681_0000014
444 Ga0495686_0001338
445 Ga0495686_0004607
446 Ga0495686_0053500
447 Ga0495615_0000058
448 Ga0495626_0002119
449 Ga0496116_0000060
450 Ga0496116_0046028
451 Ga0496116_0055185
452 Ga0496117_0013660
453 Ga0496117_0040314
454 Ga0496118_0018283
455 Ga0496118_0057989
456 Ga0496118_0060328
457 Ga0496119_0021333
458 Ga0496122_0000221
459 Ga0496122_0001615
460 Ga0496122_0002045
461 Ga0496122_0004006
462 Ga0496122_0024168
463 Ga0496123_0000756
464 Ga0496123_0000833
465 Ga0496123_0001983
466 Ga0496123_0018626
467 Ga0496124_0000009
468 Ga0496124_0000728
469 Ga0496125_0009857
470 Ga0496125_0025451
471 Ga0496125_0028564
472 Ga0496125_0033880
473 Ga0496125_0078569
474 Ga0496125_0084254
475 Ga0496126_0000305
476 Ga0496126_0077566
477 Ga0496126_0084307
478 Ga0501036_0128783
479 Ga0501047_0001086
480 Ga0501044_0038333
481 Ga0500643_000170
482 Ga0500643_000410
483 Ga0500555_016001
484 Ga0500556_0000408
485 Ga0500556_0001144
486 Ga0500562_003809
487 Ga0500608_000917
488 Ga0500614_011107
489 Ga0500618_003726
490 Ga0500642_0000001
491 Ga0500655_002148
492 Ga0500658_0006880
493 Ga0500564_041375
494 Ga0500573_0000039
495 Ga0500577_0011316
496 Ga0500590_031632
497 Ga0500616_0013118
498 Ga0500622_0016025
499 Ga0500622_0017467
500 Ga0500622_0041957
501 Ga0500624_000006
502 Ga0500624_000008
503 Ga0500624_000071
504 Ga0500639_025467
505 Ga0500636_0003185
506 Ga0500637_0000037
507 Ga0500570_024422
508 Ga0500625_000001
509 Ga0500645_000001
510 Ga0500645_001150
511 2511130969
512 2585260255
513 2600202797
514 2738710204
515 2738848629
516 2738864358
517 2739296876
518 2739358554
519 2739648922
520 2740027395
521 2748020001
522 2753767145
523 2809063890
524 2809079858
525 2809084223
526 2819551939
527 2819661035
528 2842780920
529 2852686895
530 2880523423
531 2919139281
532 2928101849
533 2928959941
534 8054306224

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01019

G_glu_transpept

Gamma-glutamyltranspeptidase

24

209

0.95

PF01019

G_glu_transpept

Gamma-glutamyltranspeptidase

207

482

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
2nlz-assembly1.cif.gz_C crystal structure of cephalosporin acylase from bacillus halodurans 0.9149 1 535
5y9b-assembly1.cif.gz_A crystal structure of bacillus licheniformis gamma glutamyl transpeptidase with don 0.9044 25 333
5xlu-assembly1.cif.gz_A high resolution crystal structure of bacillus licheniformis gamma glutamyl transpeptidase with acivicin 0.9027 25 333
5hft-assembly1.cif.gz_A crystal structure of hpxw 0.8978 9 302
2i3o-assembly1.cif.gz_B crystal structure of gamma-glutamyl transferase related protein from thermoplasma acidophilum 0.8958 10 535
ID Description Score Start End Superfamily
af_I6X9S5_228_337_1.10.246.130 Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1;Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.926 245 347 1.10.246.130
af_I6X9S5_338_511_3.60.20.40 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Gamma-glutamyltranspeptidase, small (S) subunit 0.8924 377 534 3.60.20.40
af_A0A1D8PLV5_261_374_1.10.246.130 Mainly Alpha;Orthogonal Bundle;Serum Albumin; Chain A, Domain 1;Gamma-glutamyltranspeptidase, large (L) subunit, C-terminal domain 0.8821 245 343 1.10.246.130
5hftB00 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Gamma-glutamyltranspeptidase, small (S) subunit 0.8785 351 535 3.60.20.40
2v36B01 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Gamma-glutamyltranspeptidase, small (S) subunit 0.8637 377 525 3.60.20.40
ID Description Score Start End GO Terms
AF-A0A4Q3DDQ6-F1-model_v4 Gamma-glutamyltransferase 0.9881 141 535 GO:0016740
AF-A0A4Q3DDQ6-F1-model_v4 Gamma-glutamyltransferase 0.9831 141 535 GO:0016740
AF-A0A0D6NL49-F1-model_v4 Gamma-glutamyltranspeptidase 0.9795 12 535
AF-A0A4S3LEF6-F1-model_v4 Gamma-glutamyltransferase 0.9782 192 535 GO:0016740
AF-A0A3N5XD25-F1-model_v4 Gamma-glutamyltransferase 0.9781 21 535 GO:0016740

Map