F374113

General Info

Members Datasets Scaffolds Average Seq Length
266 216 226 349

Family's Representative Sequence

Representative Sequence 3300025302|Ga0207426_1003142|Ga0207426_10031422
Length 394
Sequence VTSATVGKATRARPRCRGLPWSALQLLAWAHDLPLSLNEGNLVRYTLFGRTGLRVSELSLGAMTMGDDRGRDAAEDTSGRILDAYADAGGNFIDTANIYTGGASEQTLGALLEGRRDRFVLASKYTCMTHQGDMNAAGNHRKNLVRSVEASLERLRTDYLDVLWVHARDNFTPVEEVMRALDDVVRSGKVLYIGVSDWPAWEIAQANTLAELRGWTAFAGSQLRYNLLERTPERELLPQARAFDLAVLAWAPLAAGKLTGKYRRGETGRLATMDDGATPNHHEEETLTAVLEVAEQGGWSPAQVALAWLRSRPGNIVPIVAATKESQLADNLGAVDVTLDADALDRLDRTSEVPLGFPHDFLRQPGVIENVYGDRWAEIEDRRSTYRRTASEIR

Samples

Sample ID Description Type Environment
1 2506520007 Serratia plymuthica AS9 Isolate Rhizosphere
2 2506520008 Serratia plymuthica AS12 Isolate Unclassified
3 2537561728 Pectobacterium wasabiae CFBP 3304 Isolate Rhizoplane
4 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
5 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
6 2654587920 Serratia plymuthica HRO-C48 Isolate Rhizosphere
7 2687453601 Serratia plymuthica 3Rp8 Isolate Unclassified
8 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
9 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
10 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
11 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
12 2818991444 Filimonas endophytica 3197 Isolate Unclassified
13 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
14 2847085930 Erwinia persicina B64 Isolate Bulb
15 2855195626 Pectobacterium atrosepticum SS26 Isolate Stem Tuber
16 2858466076 Pectobacterium polaris SS28 Isolate Stem Tuber
17 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
18 2867475112 Streptomyces sp. TM32 Isolate Unclassified
19 2869551831 Serratia inhibens PRI-2C Isolate Rhizosphere
20 2871272651 Pectobacterium carotovorum SS96 Isolate Stem Tuber
21 2871282230 Pectobacterium parmentieri SS90 Isolate Stem Tuber
22 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
23 2900051742 Pectobacterium zantedeschiae 2M Isolate Stem Tuber
24 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
25 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
26 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
27 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
28 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
29 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
30 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
31 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
32 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
33 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
34 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
35 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
36 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
37 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
38 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
39 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
40 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
41 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
42 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
43 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
44 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
45 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
46 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
47 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
48 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
49 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
50 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
51 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
52 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
53 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
54 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
55 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
56 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
57 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
58 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
59 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
60 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
61 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
62 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
63 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
64 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
65 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
66 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
67 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
68 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
69 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
70 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
71 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
72 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
73 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
74 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
75 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
76 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
77 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
78 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
79 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
80 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
81 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
82 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
83 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
84 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
85 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
86 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
87 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
88 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
89 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
90 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
91 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
92 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
93 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
94 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
95 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
96 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
97 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
98 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
99 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
100 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
101 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
102 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
131 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
133 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
134 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
135 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
136 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
137 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
138 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
139 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
140 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
141 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
142 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
143 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
144 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
145 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
146 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
147 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
148 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
149 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
150 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
151 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
152 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
153 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
154 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
155 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
156 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
157 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
158 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
159 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
160 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
161 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
162 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
163 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
164 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
165 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
166 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
167 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
168 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
169 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
170 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
171 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
174 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
175 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
176 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
177 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
178 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
179 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
180 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
181 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
182 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
183 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
184 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
185 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
186 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
187 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
188 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
189 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
191 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
194 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
195 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
196 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
197 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
198 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
199 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
200 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
201 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
202 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
203 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
204 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
205 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
206 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
207 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
208 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
209 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
210 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
211 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
212 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
213 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
214 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
215 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
216 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.96
Metatranscriptomes 0
Isolates 15.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0.38
Endosphere 4.89
Nodule 0.75
Rhizoplane 5.64
Rhizosphere 70.3
Stem 0
Stem Tuber 1.88
Unclassified 16.17

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10023329 3300003320 Bacteria 50796
2 rootH2_10041216 3300003320 Bacteria 24283
3 rootH2_10073384 3300003320 Bacteria 8959
4 rootL2_10072360 3300003322 Bacteria 1670
5 rootL2_10156166 3300003322 Bacteria 2008
6 rootL2_10208579 3300003322 Bacteria 2385
7 Ga0065704_10128803 3300005289 Bacteria 1657
8 Ga0070683_100128410 3300005329 Bacteria 2398
9 Ga0070670_100151050 3300005331 Bacteria 2010
10 Ga0068868_100049126 3300005338 Bacteria 3311
11 Ga0070691_10033711 3300005341 Bacteria 2410
12 Ga0070671_100086320 3300005355 Bacteria 2625
13 Ga0070659_100148218 3300005366 Bacteria 1913
14 Ga0070667_100122886 3300005367 Bacteria 2260
15 Ga0070667_100128052 3300005367 Bacteria 2214
16 Ga0070709_10249289 3300005434 Bacteria 1278
17 Ga0070714_100006735 3300005435 Bacteria 8903
18 Ga0070714_100106326 3300005435 Bacteria 2479
19 Ga0070714_100145665 3300005435 Bacteria 2130
20 Ga0070714_100248816 3300005435 Bacteria 1643
21 Ga0070713_100013904 3300005436 Bacteria 5959
22 Ga0070713_100077883 3300005436 Bacteria 2820
23 Ga0070713_100154465 3300005436 Bacteria 2044
24 Ga0070713_100178140 3300005436 Bacteria 1909
25 Ga0070710_10081926 3300005437 Bacteria 1885
26 Ga0070710_10113694 3300005437 Bacteria 1629
27 Ga0070694_100000156 3300005444 Bacteria 35325
28 Ga0070708_100447327 3300005445 Bacteria 1219
29 Ga0070663_100050994 3300005455 Bacteria 2946
30 Ga0070678_100143068 3300005456 Bacteria 1916
31 Ga0070706_100069252 3300005467 Bacteria 3264
32 Ga0070698_100000898 3300005471 Bacteria 32677
33 Ga0070698_100003932 3300005471 Bacteria 16338
34 Ga0070679_100161241 3300005530 Bacteria 2217
35 Ga0070684_100070498 3300005535 Bacteria 3075
36 Ga0070697_100001205 3300005536 Bacteria 19532
37 Ga0070665_100154769 3300005548 Bacteria 2294
38 Ga0068857_100293070 3300005577 Bacteria 1499
39 Ga0068857_100354943 3300005577 Bacteria 1358
40 Ga0068856_100028882 3300005614 Bacteria 5419
41 Ga0068856_100076381 3300005614 Bacteria 3319
42 Ga0068852_100092056 3300005616 Bacteria 2715
43 Ga0068864_100213297 3300005618 Bacteria 1779
44 Ga0068863_100019023 3300005841 Bacteria 6573
45 Ga0068858_100128699 3300005842 Bacteria 2373
46 Ga0068860_100272613 3300005843 Bacteria 1652
47 Ga0081455_10019535 3300005937 Bacteria 6408
48 Ga0081538_10011231 3300005981 Bacteria 7269
49 Ga0081540_1046789 3300005983 Bacteria 2181
50 Ga0081539_10004988 3300005985 Bacteria 14035
51 Ga0070717_10091204 3300006028 Unclassified 2572
52 Ga0070717_10268010 3300006028 Bacteria 1512
53 Ga0075365_10183237 3300006038 Bacteria 1464
54 Ga0075363_100002708 3300006048 Bacteria 7331
55 Ga0070715_10024634 3300006163 Bacteria 2374
56 Ga0070716_100019994 3300006173 Bacteria 3509
57 Ga0070716_100049427 3300006173 Bacteria 2382
58 Ga0075370_10099437 3300006353 Bacteria 1683
59 Ga0075431_100010034 3300006847 Bacteria 9512
60 Ga0075434_100092244 3300006871 Bacteria 3031
61 Ga0079104_1000700 3300006946 Bacteria 30527
62 Ga0099794_10087922 3300007265 Bacteria 1540
63 Ga0099795_10014761 3300007788 Bacteria 2430
64 Ga0099795_10042855 3300007788 Bacteria 1617
65 Ga0099795_10048238 3300007788 Bacteria 1541
66 Ga0105251_10000073 3300009011 Bacteria 97270
67 Ga0105251_10000267 3300009011 Bacteria 52069
68 Ga0105251_10000582 3300009011 Bacteria 33639
69 Ga0105244_10000315 3300009036 Bacteria 46626
70 Ga0105250_10005421 3300009092 Bacteria 5722
71 Ga0105247_10000191 3300009101 Bacteria 60259
72 Ga0105247_10016128 3300009101 Bacteria 4476
73 Ga0114129_10162293 3300009147 Bacteria 3051
74 Ga0105241_10000004 3300009174 Bacteria 803007
75 Ga0105237_10123776 3300009545 Bacteria 2580
76 Ga0105238_10037049 3300009551 Bacteria 4960
77 Ga0105238_10037334 3300009551 Bacteria 4939
78 Ga0105249_10048310 3300009553 Bacteria 3880
79 Ga0105249_10056278 3300009553 Bacteria 3600
80 Ga0105239_10058924 3300010375 Bacteria 4215
81 Ga0105246_10058867 3300011119 Bacteria 2663
82 Ga0157373_10003158 3300013100 Bacteria 12444
83 Ga0157371_10282168 3300013102 Bacteria 1200
84 Ga0157369_10057336 3300013105 Bacteria 4202
85 Ga0157378_10233976 3300013297 Bacteria 1752
86 Ga0157375_10065074 3300013308 Bacteria 3633
87 Ga0163163_10037248 3300014325 Bacteria 4731
88 Ga0183367_1003 3300015688 Bacteria 814276
89 Ga0163161_10000004 3300017792 Bacteria 333149
90 Ga0213876_10047852 3300021384 Bacteria 2260
91 Ga0213875_10000346 3300021388 Bacteria 43687
92 Ga0207426_1000801 3300025302 Bacteria 34028
93 Ga0207426_1003142 3300025302 Bacteria 9401
94 Ga0207426_1004577 3300025302 Bacteria 6678
95 Ga0207696_1000033 3300025711 Bacteria 360689
96 Ga0207655_1000011 3300025728 Bacteria 643321
97 Ga0207713_1000065 3300025735 Bacteria 196128
98 Ga0207713_1000108 3300025735 Bacteria 137268
99 Ga0207713_1005414 3300025735 Bacteria 7993
100 Ga0207692_10030133 3300025898 Bacteria 2584
101 Ga0207710_10000016 3300025900 Bacteria 388568
102 Ga0207680_10042200 3300025903 Bacteria 2667
103 Ga0207699_10003327 3300025906 Bacteria 7664
104 Ga0207684_10262802 3300025910 Bacteria 1489
105 Ga0207654_10000006 3300025911 Bacteria 815027
106 Ga0207654_10166891 3300025911 Bacteria 1426
107 Ga0207660_10059093 3300025917 Bacteria 2751
108 Ga0207687_10041665 3300025927 Bacteria 3154
109 Ga0207700_10003735 3300025928 Bacteria 8886
110 Ga0207700_10119663 3300025928 Bacteria 2133
111 Ga0207700_10130535 3300025928 Bacteria 2051
112 Ga0207664_10025182 3300025929 Bacteria 4478
113 Ga0207664_10055217 3300025929 Bacteria 3151
114 Ga0207644_10156038 3300025931 Bacteria 1770
115 Ga0207690_10068069 3300025932 Bacteria 2445
116 Ga0207665_10071158 3300025939 Unclassified 2374
117 Ga0207689_10083377 3300025942 Bacteria 2628
118 Ga0207661_10043714 3300025944 Bacteria 3537
119 Ga0207661_10250165 3300025944 Bacteria 1575
120 Ga0207651_10300025 3300025960 Bacteria 1336
121 Ga0207712_10036369 3300025961 Bacteria 3353
122 Ga0207640_10299559 3300025981 Bacteria 1271
123 Ga0207658_10092059 3300025986 Bacteria 2354
124 Ga0207677_10011634 3300026023 Bacteria 5023
125 Ga0207702_10030143 3300026078 Bacteria 4519
126 Ga0207702_10033553 3300026078 Bacteria 4288
127 Ga0207641_10045428 3300026088 Bacteria 3698
128 Ga0207676_10020767 3300026095 Bacteria 4809
129 Ga0207674_10116430 3300026116 Bacteria 2644
130 Ga0207683_10186789 3300026121 Bacteria 1880
131 Ga0209281_1000008 3300027111 Bacteria 867470
132 Ga0268264_10263852 3300028381 Bacteria 1606
133 Ga0265336_10047656 3300028666 Bacteria 1301
134 Ga0265338_10104271 3300028800 Bacteria 2301
135 Ga0307511_10150348 3300030521 Bacteria 1338
136 Ga0307512_10031045 3300030522 Bacteria 4637
137 Ga0307513_10087955 3300031456 Bacteria 3177
138 Ga0307509_10052935 3300031507 Bacteria 4332
139 Ga0307509_10142530 3300031507 Bacteria 2329
140 Ga0307514_10027844 3300031649 Bacteria 4563
141 Ga0265314_10152176 3300031711 Bacteria 1417
142 Ga0316576_10004978 3300031727 Bacteria 8049
143 Ga0307516_10000437 3300031730 Bacteria 54879
144 Ga0307510_10032704 3300033180 Bacteria 5856
145 Ga0373952_0039391 3300035092 Bacteria 1086
146 Ga0373931_0012953 3300035691 Bacteria 4050
147 Ga0373937_0410560 3300036401 Bacteria 1285
148 Ga0395899_0058848 3300037312 Unclassified 2833
149 Ga0436364_0491232 3300037853 Unclassified 1258
150 Ga0436364_0549501 3300037853 Bacteria 49151
151 Ga0436365_0115915 3300039437 Bacteria 9601
152 Ga0436365_0260365 3300039437 Bacteria 9716
153 Ga0436363_1467169 3300039450 Bacteria 2176
154 Ga0436362_0312905 3300039453 Bacteria 2878
155 Ga0439450_009839 3300042008 Bacteria 1828
156 Ga0466972_0006001 3300044658 Bacteria 6103
157 Ga0466965_0063457 3300044683 Bacteria 1849
158 Ga0466959_0177211 3300045049 Bacteria 1493
159 Ga0495627_000141 3300046453 Bacteria 85993
160 Ga0495627_002044 3300046453 Bacteria 10345
161 Ga0495603_0006177 3300046455 Bacteria 7161
162 Ga0495629_0002723 3300046459 Bacteria 13527
163 Ga0495629_0213211 3300046459 Bacteria 1333
164 Ga0495638_0007163 3300046460 Bacteria 8031
165 Ga0495607_0000252 3300046501 Bacteria 57555
166 Ga0495618_0034940 3300046514 Bacteria 3154
167 Ga0495628_0079423 3300046516 Bacteria 2551
168 Ga0495642_0054145 3300046528 Bacteria 1654
169 Ga0495640_0184694 3300046533 Bacteria 1328
170 Ga0495625_0000776 3300046660 Bacteria 44405
171 Ga0495625_0063915 3300046660 Bacteria 2598
172 Ga0495613_0003678 3300046689 Bacteria 11501
173 Ga0495613_0035741 3300046689 Bacteria 3686
174 Ga0495676_0002731 3300047321 Bacteria 15839
175 Ga0495680_0073137 3300047322 Bacteria 2606
176 Ga0495680_0230063 3300047322 Bacteria 1320
177 Ga0495684_0139694 3300047471 Bacteria 1816
178 Ga0495614_0000538 3300048089 Bacteria 15665
179 Ga0496102_0185862 3300048905 Bacteria 1958
180 Ga0496104_0039129 3300048907 Bacteria 4439
181 Ga0496106_0022647 3300048909 Bacteria 4669
182 Ga0496107_0053255 3300048910 Bacteria 2919
183 Ga0496107_0077935 3300048910 Bacteria 2414
184 Ga0496108_0047076 3300048911 Bacteria 3604
185 Ga0496109_0014327 3300048912 Bacteria 6899
186 Ga0496110_0040016 3300048913 Bacteria 4084
187 Ga0496111_0005126 3300048914 Bacteria 8346
188 Ga0496112_0073328 3300048915 Archaea 3384
189 Ga0496112_0094663 3300048915 Bacteria 2957
190 Ga0496113_0007723 3300048916 Bacteria 6941
191 Ga0496115_0071408 3300048918 Bacteria 2816
192 Ga0496116_0000031 3300048919 Bacteria 420043
193 Ga0496117_0001926 3300048920 Bacteria 27685
194 Ga0496117_0017790 3300048920 Bacteria 5924
195 Ga0496117_0103698 3300048920 Bacteria 1792
196 Ga0496118_0115547 3300048921 Bacteria 1766
197 Ga0496119_0010798 3300048922 Bacteria 7643
198 Ga0496121_0000078 3300048924 Bacteria 233455
199 Ga0496125_0079534 3300048928 Bacteria 2515
200 Ga0496126_0029562 3300048929 Bacteria 5204
201 Ga0495678_012143 3300049459 Bacteria 4091
202 Ga0501031_0045326 3300049568 Bacteria 2869
203 Ga0501033_0151502 3300049570 Bacteria 1673
204 Ga0501036_0200048 3300049572 Bacteria 1680
205 Ga0501038_0089132 3300049574 Bacteria 2588
206 Ga0501040_0025435 3300049576 Bacteria 3980
207 Ga0501048_0035811 3300049582 Bacteria 3570
208 Ga0501074_0020756 3300049590 Bacteria 4772
209 Ga0501075_0117341 3300049591 Bacteria 2023
210 Ga0501076_0071058 3300049592 Bacteria 2784
211 Ga0501081_0022984 3300049743 Bacteria 4175
212 nmdc:mga0yw44_20883_c1 3300050492 Bacteria 3644
213 nmdc:mga06r32_12786_c1 3300050510 Bacteria 7589
214 nmdc:mga0rr50_154021_c1 3300050513 Bacteria 1860
215 nmdc:mga0rr50_378592_c1 3300050513 Bacteria 1193
216 Ga0495601_0003172 3300053077 Bacteria 9416
217 Ga0495601_0061290 3300053077 Bacteria 2388
218 Ga0495619_0128570 3300053085 Bacteria 1740
219 Ga0500559_0121675 3300053136 Unclassified 1214
220 Ga0500600_0037837 3300053149 Bacteria 2796
221 Ga0500616_0022107 3300053153 Bacteria 3556
222 Ga0500622_0000002 3300053156 Bacteria 646442
223 Ga0500622_0000259 3300053156 Bacteria 53922
224 Ga0500622_0000479 3300053156 Bacteria 37484
225 Ga0501084_0091649 3300054114 Bacteria 2551
226 Ga0590071_007742 3300059421 Bacteria 2539

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300036401 Ga0373937_0410560 Ga0373937_0410560_465_1259 248
2 3300049591 Ga0501075_0117341 Ga0501075_0117341_44_976 278
3 3300053085 Ga0495619_0128570 Ga0495619_0128570_847_1728 284
4 3300025942 Ga0207689_10083377 Ga0207689_100833771 293
5 3300047322 Ga0495680_0230063 Ga0495680_0230063_274_1272 313
6 3300046533 Ga0495640_0184694 Ga0495640_0184694_50_1042 314
7 3300050513 nmdc:mga0rr50_154021_c1 nmdc:mga0rr50_154021_c1_884_1849 314
8 3300049568 Ga0501031_0045326 Ga0501031_0045326_623_1669 315
9 3300049570 Ga0501033_0151502 Ga0501033_0151502_170_1216 315
10 3300049572 Ga0501036_0200048 Ga0501036_0200048_435_1481 315
11 3300049574 Ga0501038_0089132 Ga0501038_0089132_323_1369 315
12 3300049576 Ga0501040_0025435 Ga0501040_0025435_2118_3164 315
13 3300049582 Ga0501048_0035811 Ga0501048_0035811_189_1235 315
14 3300049590 Ga0501074_0020756 Ga0501074_0020756_1634_2680 315
15 3300049743 Ga0501081_0022984 Ga0501081_0022984_309_1355 315
16 3300054114 Ga0501084_0091649 Ga0501084_0091649_220_1266 315
17 3300053153 Ga0500616_0022107 Ga0500616_0022107_2377_3342 316
18 3300031730 Ga0307516_10000437 Ga0307516_1000043727 317
19 3300044658 Ga0466972_0006001 Ga0466972_0006001_4240_5208 317
20 3300009551 Ga0105238_10037049 Ga0105238_100370495 321
21 3300013102 Ga0157371_10282168 Ga0157371_102821681 321
22 3300035092 Ga0373952_0039391 Ga0373952_0039391_40_1041 321
23 3300048909 Ga0496106_0022647 Ga0496106_0022647_1016_2017 321
24 3300048910 Ga0496107_0077935 Ga0496107_0077935_1380_2381 321
25 3300048913 Ga0496110_0040016 Ga0496110_0040016_3012_4013 321
26 3300049592 Ga0501076_0071058 Ga0501076_0071058_103_1149 322
27 3300005471 Ga0070698_100003932 Ga0070698_1000039322 325
28 3300037312 Ga0395899_0058848 Ga0395899_0058848_996_2036 325
29 3300028666 Ga0265336_10047656 Ga0265336_100476562 326
30 3300028800 Ga0265338_10104271 Ga0265338_101042712 326
31 3300031711 Ga0265314_10152176 Ga0265314_101521761 326
32 3300048915 Ga0496112_0073328 Ga0496112_0073328_1401_2444 326
33 3300048920 Ga0496117_0017790 Ga0496117_0017790_4913_5908 327
34 3300005331 Ga0070670_100151050 Ga0070670_1001510503 328
35 3300005367 Ga0070667_100128052 Ga0070667_1001280522 328
36 3300005577 Ga0068857_100354943 Ga0068857_1003549432 328
37 3300005842 Ga0068858_100128699 Ga0068858_1001286992 328
38 3300009553 Ga0105249_10048310 Ga0105249_100483103 328
39 3300009553 Ga0105249_10056278 Ga0105249_100562781 328
40 3300025961 Ga0207712_10036369 Ga0207712_100363692 328
41 3300026095 Ga0207676_10020767 Ga0207676_100207671 328
42 3300047322 Ga0495680_0073137 Ga0495680_0073137_397_1419 328
43 iso_pu_bacteria 2739367866 2740033449 328
44 3300005985 Ga0081539_10004988 Ga0081539_1000498811 329
45 iso_pu_bacteria 2818991444 2819586131 329
46 iso_pu_bacteria 2977232053 2977236652 329
47 iso_pu_bacteria 2875391855 2875397626 330
48 iso_pu_bacteria 2990059506 2990060186 330
49 3300005444 Ga0070694_100000156 Ga0070694_10000015617 332
50 3300006028 Ga0070717_10268010 Ga0070717_102680102 332
51 3300046460 Ga0495638_0007163 Ga0495638_0007163_5063_6079 332
52 3300046660 Ga0495625_0000776 Ga0495625_0000776_15211_16227 332
53 3300003320 rootH2_10073384 rootH2_100733843 333
54 3300005289 Ga0065704_10128803 Ga0065704_101288032 333
55 3300005614 Ga0068856_100028882 Ga0068856_1000288822 333
56 3300006847 Ga0075431_100010034 Ga0075431_1000100345 333
57 3300009147 Ga0114129_10162293 Ga0114129_101622931 333
58 3300017792 Ga0163161_10000004 Ga0163161_10000004272 333
59 3300045049 Ga0466959_0177211 Ga0466959_0177211_137_1159 333
60 3300046453 Ga0495627_000141 Ga0495627_000141_10439_11485 333
61 3300050510 nmdc:mga06r32_12786_c1 nmdc:mga06r32_12786_c1_1097_2128 333
62 3300005445 Ga0070708_100447327 Ga0070708_1004473271 334
63 3300005471 Ga0070698_100000898 Ga0070698_10000089823 334
64 3300006038 Ga0075365_10183237 Ga0075365_101832372 334
65 3300031727 Ga0316576_10004978 Ga0316576_100049784 334
66 3300046459 Ga0495629_0213211 Ga0495629_0213211_172_1224 334
67 3300046514 Ga0495618_0034940 Ga0495618_0034940_419_1483 334
68 3300046516 Ga0495628_0079423 Ga0495628_0079423_225_1289 334
69 3300046689 Ga0495613_0035741 Ga0495613_0035741_337_1401 334
70 3300047471 Ga0495684_0139694 Ga0495684_0139694_167_1231 334
71 3300050492 nmdc:mga0yw44_20883_c1 nmdc:mga0yw44_20883_c1_989_2035 334
72 3300053077 Ga0495601_0003172 Ga0495601_0003172_127_1191 334
73 3300053077 Ga0495601_0061290 Ga0495601_0061290_321_1373 334
74 iso_pu_bacteria 2811994879 2812360818 334
75 iso_pu_bacteria 2912715099 2912723138 334
76 iso_pu_bacteria 2946064051 2946065052 334
77 iso_pu_bacteria 2947224130 2947232383 334
78 iso_pu_bacteria 2954380949 2954389244 334
79 3300042008 Ga0439450_009839 Ga0439450_009839_560_1594 335
80 3300059421 Ga0590071_007742 Ga0590071_007742_801_1835 335
81 iso_pu_bacteria 2862705112 2862705464 335
82 iso_pu_bacteria 8008485437 8008488762 335
83 iso_pu_bacteria 8025524527 8025528245 335
84 3300005434 Ga0070709_10249289 Ga0070709_102492891 336
85 3300005435 Ga0070714_100248816 Ga0070714_1002488162 336
86 3300005437 Ga0070710_10081926 Ga0070710_100819262 336
87 3300006173 Ga0070716_100019994 Ga0070716_1000199942 336
88 3300007788 Ga0099795_10014761 Ga0099795_100147612 336
89 3300007788 Ga0099795_10042855 Ga0099795_100428551 336
90 3300025928 Ga0207700_10130535 Ga0207700_101305353 336
91 3300025939 Ga0207665_10071158 Ga0207665_100711582 336
92 iso_pu_bacteria 2582581312 2585295974 336
93 iso_pu_bacteria 2837268691 2837270576 336
94 iso_pu_bacteria 2867475112 2867476644 336
95 iso_pu_bacteria 2997451912 2997458879 336
96 iso_pu_bacteria 3002998708 3003008072 336
97 iso_pu_bacteria 8054160619 8054163066 336
98 iso_pu_bacteria 2791355406 2793980893 337
99 iso_pu_bacteria 8047893842 8047901835 337
100 iso_pu_bacteria 8048356638 8048357056 337
101 iso_pu_bacteria 8048369669 8048378771 337
102 iso_pu_bacteria 8048379754 8048387873 337
103 3300003322 rootL2_10072360 rootL2_100723602 338
104 3300005937 Ga0081455_10019535 Ga0081455_100195352 338
105 3300005981 Ga0081538_10011231 Ga0081538_100112313 338
106 3300006048 Ga0075363_100002708 Ga0075363_1000027087 338
107 3300006353 Ga0075370_10099437 Ga0075370_100994372 338
108 3300015688 Ga0183367_1003 Ga0183367_1003328 338
109 3300030521 Ga0307511_10150348 Ga0307511_101503481 338
110 3300030522 Ga0307512_10031045 Ga0307512_100310455 338
111 3300031456 Ga0307513_10087955 Ga0307513_100879554 338
112 3300031507 Ga0307509_10052935 Ga0307509_100529355 338
113 3300031649 Ga0307514_10027844 Ga0307514_100278446 338
114 3300033180 Ga0307510_10032704 Ga0307510_100327046 338
115 3300044683 Ga0466965_0063457 Ga0466965_0063457_392_1444 338
116 3300046660 Ga0495625_0063915 Ga0495625_0063915_21_1085 338
117 3300053149 Ga0500600_0037837 Ga0500600_0037837_1266_2318 338
118 iso_pu_bacteria 2954691527 2954700019 338
119 iso_pu_bacteria 2954701450 2954702199 338
120 3300005436 Ga0070713_100178140 Ga0070713_1001781402 339
121 3300006028 Ga0070717_10091204 Ga0070717_100912042 339
122 3300048920 Ga0496117_0103698 Ga0496117_0103698_164_1228 339
123 3300048921 Ga0496118_0115547 Ga0496118_0115547_613_1677 339
124 iso_pu_bacteria 2847085930 2847089188 339
125 iso_pu_bacteria 2900051742 2900053534 339
126 3300005329 Ga0070683_100128410 Ga0070683_1001284102 340
127 3300005367 Ga0070667_100122886 Ga0070667_1001228862 340
128 3300021384 Ga0213876_10047852 Ga0213876_100478523 340
129 3300025302 Ga0207426_1000801 Ga0207426_100080125 340
130 3300025302 Ga0207426_1003142 Ga0207426_10031422 340
131 3300025302 Ga0207426_1004577 Ga0207426_10045772 340
132 3300025986 Ga0207658_10092059 Ga0207658_100920592 340
133 3300031507 Ga0307509_10142530 Ga0307509_101425302 340
134 3300039437 Ga0436365_0260365 Ga0436365_0260365_3196_4248 340
135 3300039450 Ga0436363_1467169 Ga0436363_1467169_449_1501 340
136 3300039453 Ga0436362_0312905 Ga0436362_0312905_443_1495 340
137 3300046455 Ga0495603_0006177 Ga0495603_0006177_5970_7028 340
138 3300046459 Ga0495629_0002723 Ga0495629_0002723_12092_13150 340
139 3300046689 Ga0495613_0003678 Ga0495613_0003678_9091_10149 340
140 3300047321 Ga0495676_0002731 Ga0495676_0002731_7878_8936 340
141 3300048089 Ga0495614_0000538 Ga0495614_0000538_13255_14313 340
142 iso_pu_bacteria 2506520007 2506576988 340
143 iso_pu_bacteria 2506520008 2506582126 340
144 iso_pu_bacteria 2654587920 2656279358 340
145 iso_pu_bacteria 2687453601 2689443389 340
146 iso_pu_bacteria 2869551831 2869552798 340
147 3300005338 Ga0068868_100049126 Ga0068868_1000491263 341
148 3300005341 Ga0070691_10033711 Ga0070691_100337112 341
149 3300005355 Ga0070671_100086320 Ga0070671_1000863202 341
150 3300005366 Ga0070659_100148218 Ga0070659_1001482181 341
151 3300005435 Ga0070714_100006735 Ga0070714_1000067355 341
152 3300005435 Ga0070714_100106326 Ga0070714_1001063263 341
153 3300005435 Ga0070714_100145665 Ga0070714_1001456652 341
154 3300005436 Ga0070713_100013904 Ga0070713_1000139046 341
155 3300005436 Ga0070713_100077883 Ga0070713_1000778833 341
156 3300005436 Ga0070713_100154465 Ga0070713_1001544652 341
157 3300005437 Ga0070710_10113694 Ga0070710_101136941 341
158 3300005455 Ga0070663_100050994 Ga0070663_1000509945 341
159 3300005456 Ga0070678_100143068 Ga0070678_1001430682 341
160 3300005467 Ga0070706_100069252 Ga0070706_1000692524 341
161 3300005530 Ga0070679_100161241 Ga0070679_1001612412 341
162 3300005535 Ga0070684_100070498 Ga0070684_1000704982 341
163 3300005536 Ga0070697_100001205 Ga0070697_10000120510 341
164 3300005548 Ga0070665_100154769 Ga0070665_1001547692 341
165 3300005577 Ga0068857_100293070 Ga0068857_1002930701 341
166 3300005614 Ga0068856_100076381 Ga0068856_1000763814 341
167 3300005616 Ga0068852_100092056 Ga0068852_1000920562 341
168 3300005618 Ga0068864_100213297 Ga0068864_1002132972 341
169 3300005841 Ga0068863_100019023 Ga0068863_1000190234 341
170 3300005843 Ga0068860_100272613 Ga0068860_1002726132 341
171 3300005983 Ga0081540_1046789 Ga0081540_10467892 341
172 3300006163 Ga0070715_10024634 Ga0070715_100246342 341
173 3300006173 Ga0070716_100049427 Ga0070716_1000494273 341
174 3300006871 Ga0075434_100092244 Ga0075434_1000922445 341
175 3300007265 Ga0099794_10087922 Ga0099794_100879221 341
176 3300007788 Ga0099795_10048238 Ga0099795_100482382 341
177 3300009101 Ga0105247_10016128 Ga0105247_100161284 341
178 3300009545 Ga0105237_10123776 Ga0105237_101237761 341
179 3300009551 Ga0105238_10037334 Ga0105238_100373342 341
180 3300010375 Ga0105239_10058924 Ga0105239_100589242 341
181 3300011119 Ga0105246_10058867 Ga0105246_100588673 341
182 3300013105 Ga0157369_10057336 Ga0157369_100573364 341
183 3300013297 Ga0157378_10233976 Ga0157378_102339762 341
184 3300013308 Ga0157375_10065074 Ga0157375_100650743 341
185 3300014325 Ga0163163_10037248 Ga0163163_100372482 341
186 3300021388 Ga0213875_10000346 Ga0213875_100003468 341
187 3300025898 Ga0207692_10030133 Ga0207692_100301332 341
188 3300025903 Ga0207680_10042200 Ga0207680_100422001 341
189 3300025906 Ga0207699_10003327 Ga0207699_100033273 341
190 3300025910 Ga0207684_10262802 Ga0207684_102628022 341
191 3300025911 Ga0207654_10166891 Ga0207654_101668912 341
192 3300025917 Ga0207660_10059093 Ga0207660_100590933 341
193 3300025927 Ga0207687_10041665 Ga0207687_100416653 341
194 3300025928 Ga0207700_10003735 Ga0207700_100037356 341
195 3300025928 Ga0207700_10119663 Ga0207700_101196632 341
196 3300025929 Ga0207664_10025182 Ga0207664_100251822 341
197 3300025929 Ga0207664_10055217 Ga0207664_100552173 341
198 3300025931 Ga0207644_10156038 Ga0207644_101560382 341
199 3300025932 Ga0207690_10068069 Ga0207690_100680692 341
200 3300025944 Ga0207661_10043714 Ga0207661_100437143 341
201 3300025944 Ga0207661_10250165 Ga0207661_102501652 341
202 3300025960 Ga0207651_10300025 Ga0207651_103000252 341
203 3300025981 Ga0207640_10299559 Ga0207640_102995591 341
204 3300026023 Ga0207677_10011634 Ga0207677_100116344 341
205 3300026078 Ga0207702_10030143 Ga0207702_100301435 341
206 3300026078 Ga0207702_10033553 Ga0207702_100335532 341
207 3300026088 Ga0207641_10045428 Ga0207641_100454283 341
208 3300026116 Ga0207674_10116430 Ga0207674_101164303 341
209 3300026121 Ga0207683_10186789 Ga0207683_101867892 341
210 3300028381 Ga0268264_10263852 Ga0268264_102638522 341
211 3300035691 Ga0373931_0012953 Ga0373931_0012953_860_1933 341
212 3300037853 Ga0436364_0491232 Ga0436364_0491232_26_1135 341
213 3300037853 Ga0436364_0549501 Ga0436364_0549501_20058_21230 341
214 3300046501 Ga0495607_0000252 Ga0495607_0000252_8515_9564 341
215 3300048905 Ga0496102_0185862 Ga0496102_0185862_136_1209 341
216 3300048907 Ga0496104_0039129 Ga0496104_0039129_2085_3158 341
217 3300048910 Ga0496107_0053255 Ga0496107_0053255_1397_2470 341
218 3300048911 Ga0496108_0047076 Ga0496108_0047076_33_1106 341
219 3300048912 Ga0496109_0014327 Ga0496109_0014327_3748_4821 341
220 3300048914 Ga0496111_0005126 Ga0496111_0005126_1373_2446 341
221 3300048915 Ga0496112_0094663 Ga0496112_0094663_521_1594 341
222 3300048916 Ga0496113_0007723 Ga0496113_0007723_2445_3518 341
223 3300048918 Ga0496115_0071408 Ga0496115_0071408_696_1769 341
224 3300048924 Ga0496121_0000078 Ga0496121_0000078_79545_80591 341
225 3300048929 Ga0496126_0029562 Ga0496126_0029562_2532_3578 341
226 3300049459 Ga0495678_012143 Ga0495678_012143_1433_2494 341
227 3300050513 nmdc:mga0rr50_378592_c1 nmdc:mga0rr50_378592_c1_83_1156 341
228 3300053156 Ga0500622_0000002 Ga0500622_0000002_312692_313732 341
229 iso_pu_bacteria 2537561728 2538425028 341
230 iso_pu_bacteria 2855195626 2855196453 341
231 iso_pu_bacteria 2858466076 2858467359 341
232 iso_pu_bacteria 2871272651 2871275754 341
233 iso_pu_bacteria 2871282230 2871286196 341
234 3300039437 Ga0436365_0115915 Ga0436365_0115915_4141_5337 343
235 3300003322 rootL2_10208579 rootL2_102085792 344
236 3300006946 Ga0079104_1000700 Ga0079104_10007008 344
237 3300009011 Ga0105251_10000073 Ga0105251_1000007368 344
238 3300009011 Ga0105251_10000582 Ga0105251_1000058221 344
239 3300009092 Ga0105250_10005421 Ga0105250_100054213 344
240 3300009101 Ga0105247_10000191 Ga0105247_1000019156 344
241 3300009174 Ga0105241_10000004 Ga0105241_10000004118 344
242 3300013100 Ga0157373_10003158 Ga0157373_1000315812 344
243 3300025711 Ga0207696_1000033 Ga0207696_1000033231 344
244 3300025735 Ga0207713_1000065 Ga0207713_1000065133 344
245 3300025735 Ga0207713_1000108 Ga0207713_100010861 344
246 3300025900 Ga0207710_10000016 Ga0207710_10000016139 344
247 3300025911 Ga0207654_10000006 Ga0207654_10000006134 344
248 3300027111 Ga0209281_1000008 Ga0209281_1000008736 344
249 3300048919 Ga0496116_0000031 Ga0496116_0000031_132742_133788 344
250 3300048920 Ga0496117_0001926 Ga0496117_0001926_25334_26380 344
251 3300048922 Ga0496119_0010798 Ga0496119_0010798_2956_4002 344
252 3300009011 Ga0105251_10000267 Ga0105251_100002678 345
253 3300009036 Ga0105244_10000315 Ga0105244_1000031522 345
254 3300025728 Ga0207655_1000011 Ga0207655_100001142 345
255 3300025735 Ga0207713_1005414 Ga0207713_10054144 345
256 3300053156 Ga0500622_0000479 Ga0500622_0000479_16826_17866 346
257 iso_pu_bacteria 2585428187 2588233064 347
258 iso_pu_bacteria 2739367874 2740058860 347
259 3300046528 Ga0495642_0054145 Ga0495642_0054145_270_1379 349
260 3300003320 rootH2_10023329 rootH2_1002332921 351
261 3300003320 rootH2_10041216 rootH2_100412168 351
262 3300003322 rootL2_10156166 rootL2_101561662 351
263 3300046453 Ga0495627_002044 Ga0495627_002044_7159_8214 351
264 3300048928 Ga0496125_0079534 Ga0496125_0079534_590_1645 351
265 3300053136 Ga0500559_0121675 Ga0500559_0121675_116_1171 351
266 3300053156 Ga0500622_0000259 Ga0500622_0000259_38213_39268 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00248

Aldo_ket_red

Aldo/keto reductase family

57

352

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7utf-assembly2.cif.gz_D structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol 0.9559 1 321
7utf-assembly1.cif.gz_C structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol 0.9275 1 338
7utf-assembly1.cif.gz_A structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol 0.9267 1 334
4xk2-assembly2.cif.gz_B crystal structure of aldo-keto reductase from polaromonas sp. js666 0.9228 1 338
7utf-assembly2.cif.gz_B structure-function characterization of an aldo-keto reductase involved in detoxification of the mycotoxin, deoxynivalenol 0.9169 1 338
ID Description Score Start End Superfamily
af_A0A0R0ETH2_7_234_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.9144 1 218 3.20.20.100
4xk2A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.902 1 338 3.20.20.100
3v0uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.902 1 325 3.20.20.100
af_C4J2K0_1_323_3.20.20.100 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8986 1 319 3.20.20.100
5danA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;NADP-dependent oxidoreductase domain 0.8931 1 317 3.20.20.100
ID Description Score Start End GO Terms
AF-A0A397TSG5-F1-model_v4 NADP-dependent oxidoreductase domain-containing protein 0.9842 8 85 GO:0005829
AF-A0A1H6ZHW6-F1-model_v4 Aldo/keto reductase family protein 0.9788 1 106 GO:0005829
AF-A0A529HD53-F1-model_v4 Aldo/keto reductase 0.9764 90 215 GO:0005829
GO:0016491
AF-A0A0M8PDJ2-F1-model_v4 NADP-dependent oxidoreductase domain-containing protein 0.9745 2 214
AF-A0A2M8P5I0-F1-model_v4 Aldo/keto reductase 0.9744 108 207 GO:0005829
GO:0016491

Feature Viewer

pLDDT pTM Quality
92.88 0.91 High
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Predicted Structure (AlphaFold2)

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