F373629

General Info

Members Datasets Scaffolds Average Seq Length
265 167 530 221

Family's Representative Sequence

Representative Sequence 3300049581|Ga0501047_0163286|Ga0501047_0163286_1108_1818
Length 236
Sequence VTIRVLVADDQSLVRGGFRMLLAGEEDIEVVAEASNGLEAVDKAARYQPTVVLMDIRMPELDGLEATRRILAADDRARVLILTTFDLDEYVYEALRVGASGFVLKDDPPEDLLAAIRTVARGEALLSPGVTKRVIEKFARLPHREPPPEIGELTERELDVLRLIARGLSNAEIGQELFISDTTVKTHITHILQKLGLRDRVQAVVLAYQTGLFDAELRPRAGRDESRLGPDRSGPY

Samples

Sample ID Description Type Environment
1 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
29 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
72 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
77 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
78 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
83 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
84 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
85 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
86 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
87 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
88 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
89 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
90 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
91 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
92 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
97 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
98 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
99 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
100 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
101 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
104 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
105 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
106 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
107 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
108 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
109 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
110 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
111 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
112 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
113 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
114 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
115 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
116 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
117 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
118 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
119 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
120 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
121 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
128 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
145 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
146 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
147 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
148 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
149 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
150 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
160 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
161 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
162 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
163 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
166 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
167 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.25
Metatranscriptomes 0.75
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.13
Nodule 0
Rhizoplane 1.51
Rhizosphere 95.09
Stem 0
Stem Tuber 0
Unclassified 4.53

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501047_0163286 3300049581 Bacteria 2099
2 Ga0070683_100003555 3300005329 Bacteria 12682
3 Ga0070683_100308832 3300005329 Bacteria 1505
4 Ga0070682_100292025 3300005337 Bacteria 1193
5 Ga0068868_100271133 3300005338 Bacteria 1434
6 Ga0070691_10017564 3300005341 Bacteria 3292
7 Ga0070691_10065164 3300005341 Bacteria 1759
8 Ga0070687_100050308 3300005343 Bacteria 2152
9 Ga0070675_100036792 3300005354 Bacteria 3985
10 Ga0070688_100613547 3300005365 Bacteria 834
11 Ga0070659_100360762 3300005366 Bacteria 1221
12 Ga0070714_100253366 3300005435 Bacteria 1628
13 Ga0070714_100301785 3300005435 Bacteria 1493
14 Ga0070713_100007676 3300005436 Bacteria 7592
15 Ga0070713_100507939 3300005436 Unclassified 1138
16 Ga0070711_100061358 3300005439 Bacteria 2617
17 Ga0070700_100058000 3300005441 Bacteria 2431
18 Ga0070708_100277149 3300005445 Bacteria 1578
19 Ga0070678_100257115 3300005456 Bacteria 1467
20 Ga0070678_100544571 3300005456 Bacteria 1029
21 Ga0070681_10153703 3300005458 Bacteria 2227
22 Ga0070698_100523484 3300005471 Unclassified 1124
23 Ga0070679_100045545 3300005530 Bacteria 4371
24 Ga0070684_100011634 3300005535 Bacteria 7012
25 Ga0068853_101221376 3300005539 Bacteria 726
26 Ga0070696_100287054 3300005546 Bacteria 1256
27 Ga0070693_100223729 3300005547 Bacteria 1234
28 Ga0070704_100603531 3300005549 Bacteria 965
29 Ga0070664_100587942 3300005564 Bacteria 1032
30 Ga0068857_100017502 3300005577 Bacteria 6282
31 Ga0068854_100284357 3300005578 Bacteria 1333
32 Ga0068856_100308033 3300005614 Bacteria 1601
33 Ga0068856_100446532 3300005614 Bacteria 1314
34 Ga0070702_100020483 3300005615 Bacteria 3466
35 Ga0068851_10163241 3300005834 Bacteria 1225
36 Ga0068870_10271925 3300005840 Bacteria 1059
37 Ga0070717_10000345 3300006028 Bacteria 29989
38 Ga0070717_10189490 3300006028 Bacteria 1796
39 Ga0075365_10207684 3300006038 Bacteria 1373
40 Ga0075430_100004537 3300006846 Bacteria 11690
41 Ga0075431_100001309 3300006847 Bacteria 22778
42 Ga0075429_100013244 3300006880 Bacteria 7152
43 Ga0111539_10191238 3300009094 Bacteria 2388
44 Ga0111539_10332275 3300009094 Bacteria 1769
45 Ga0105245_10119043 3300009098 Bacteria 2465
46 Ga0114129_10065320 3300009147 Bacteria 5079
47 Ga0105243_10308020 3300009148 Bacteria 1438
48 Ga0105248_11043445 3300009177 Bacteria 924
49 Ga0105249_10641962 3300009553 Bacteria 1119
50 Ga0105246_10295524 3300011119 Bacteria 1305
51 Ga0157372_10107176 3300013307 Unclassified 3197
52 Ga0157372_10741831 3300013307 Bacteria 1142
53 Ga0157375_10595331 3300013308 Bacteria 1265
54 Ga0157380_10166163 3300014326 Bacteria 1923
55 Ga0157377_10049368 3300014745 Bacteria 2365
56 Ga0157379_11017238 3300014968 Bacteria 791
57 Ga0206351_10909920 3300020077 Bacteria 910
58 Ga0213874_10000128 3300021377 Bacteria 12696
59 Ga0224712_10010371 3300022467 Bacteria 2848
60 Ga0207688_10070740 3300025901 Bacteria 1979
61 Ga0207699_10106362 3300025906 Bacteria 1790
62 Ga0207693_10366569 3300025915 Bacteria 1127
63 Ga0207660_10216726 3300025917 Bacteria 1501
64 Ga0207662_10046595 3300025918 Bacteria 2565
65 Ga0207659_10019285 3300025926 Bacteria 4486
66 Ga0207687_10191114 3300025927 Bacteria 1594
67 Ga0207687_10622885 3300025927 Bacteria 911
68 Ga0207700_10451106 3300025928 Bacteria 1133
69 Ga0207664_10738149 3300025929 Unclassified 885
70 Ga0207704_10517571 3300025938 Bacteria 964
71 Ga0207689_10102023 3300025942 Bacteria 2357
72 Ga0207640_10149013 3300025981 Bacteria 1716
73 Ga0207640_10675798 3300025981 Bacteria 883
74 Ga0207677_10346173 3300026023 Bacteria 1244
75 Ga0207708_10090006 3300026075 Bacteria 2365
76 Ga0207702_10440475 3300026078 Bacteria 1263
77 Ga0207674_10012077 3300026116 Bacteria 9674
78 Ga0207675_100189750 3300026118 Bacteria 1971
79 Ga0207683_10086794 3300026121 Bacteria 2782
80 Ga0207683_10236977 3300026121 Bacteria 1664
81 Ga0207698_10510180 3300026142 Bacteria 1172
82 Ga0207698_10705740 3300026142 Bacteria 1004
83 Ga0207698_10881892 3300026142 Bacteria 901
84 Ga0209966_1047018 3300027695 Bacteria 911
85 Ga0207428_10026115 3300027907 Bacteria 4879
86 Ga0265338_10014277 3300028800 Bacteria 8853
87 Ga0265327_10010570 3300031251 Bacteria 6468
88 Ga0316575_10120075 3300031665 Unclassified 1075
89 Ga0316575_10136666 3300031665 Bacteria 1007
90 Ga0307413_10076136 3300031824 Bacteria 2132
91 Ga0316212_1001121 3300033547 Bacteria 3574
92 Ga0316574_0157455 3300035398 Bacteria 1463
93 Ga0316574_0212648 3300035398 Unclassified 1240
94 Ga0373947_0180130 3300035725 Bacteria 1375
95 Ga0395900_0339205 3300037418 Bacteria 1479
96 Ga0395898_0254392 3300037466 Bacteria 1675
97 Ga0436364_0152180 3300037853 Unclassified 1937
98 Ga0395901_0463273 3300038443 Bacteria 1295
99 Ga0436365_1047856 3300039437 Bacteria 937
100 Ga0436363_0303036 3300039450 Bacteria 1221
101 Ga0436363_1140580 3300039450 Bacteria 31517
102 Ga0436362_1067121 3300039453 Bacteria 4388
103 Ga0439439_0000233 3300041406 Bacteria 8702
104 Ga0439433_0007411 3300041999 Bacteria 2369
105 Ga0439448_0013484 3300042005 Bacteria 2456
106 Ga0439457_034318 3300042014 Bacteria 1128
107 Ga0439462_0050957 3300042015 Bacteria 1112
108 Ga0439446_0005887 3300042156 Bacteria 3172
109 Ga0439444_0076474 3300042437 Bacteria 726
110 Ga0466969_0072518 3300044656 Unclassified 1653
111 Ga0466961_0005568 3300044693 Bacteria 7952
112 Ga0466963_0032828 3300044694 Bacteria 3365
113 Ga0466963_0069518 3300044694 Bacteria 2367
114 Ga0466971_0084881 3300044719 Unclassified 1446
115 Ga0466970_0097954 3300044765 Bacteria 1595
116 Ga0466957_0006997 3300044842 Bacteria 6376
117 Ga0466960_0006921 3300044901 Bacteria 4574
118 Ga0466959_0348653 3300045049 Unclassified 1009
119 Ga0466958_0056173 3300045836 Unclassified 2390
120 Ga0466958_0387186 3300045836 Bacteria 902
121 Ga0466967_0297220 3300045976 Bacteria 1553
122 Ga0466967_0307661 3300045976 Bacteria 1526
123 Ga0466967_0356217 3300045976 Bacteria 1417
124 Ga0466967_0667222 3300045976 Bacteria 1029
125 Ga0466967_0782376 3300045976 Bacteria 947
126 Ga0495603_0195073 3300046455 Bacteria 1170
127 Ga0495629_0166950 3300046459 Bacteria 1528
128 Ga0495582_0078625 3300046473 Bacteria 1830
129 Ga0495582_0118665 3300046473 Bacteria 1489
130 Ga0495662_0029985 3300046476 Bacteria 2626
131 Ga0495664_0063242 3300046477 Bacteria 2205
132 Ga0495584_0079970 3300046491 Bacteria 1644
133 Ga0495594_0031527 3300046499 Bacteria 2874
134 Ga0495630_0017649 3300046517 Bacteria 5231
135 Ga0495663_0022995 3300046525 Bacteria 1803
136 Ga0495656_0056348 3300046615 Bacteria 1698
137 Ga0495656_0267361 3300046615 Bacteria 868
138 Ga0495668_0112257 3300046616 Bacteria 1491
139 Ga0495634_0110670 3300046642 Bacteria 1766
140 Ga0495611_0129023 3300046648 Bacteria 1180
141 Ga0495599_0242636 3300046678 Bacteria 1098
142 Ga0495658_0066175 3300046683 Bacteria 2087
143 Ga0495669_0037713 3300046684 Bacteria 2140
144 Ga0495671_0164546 3300046692 Bacteria 1079
145 Ga0495660_0189569 3300046810 Bacteria 989
146 Ga0495581_0036717 3300047315 Bacteria 2835
147 Ga0495674_0038318 3300047319 Bacteria 4303
148 Ga0495676_0009387 3300047321 Bacteria 8914
149 Ga0495676_0022561 3300047321 Bacteria 5475
150 Ga0495686_0371896 3300047472 Bacteria 773
151 Ga0495626_0080119 3300048091 Bacteria 1452
152 Ga0496102_0190571 3300048905 Bacteria 1932
153 Ga0496107_0137521 3300048910 Bacteria 1805
154 Ga0496108_0574614 3300048911 Bacteria 983
155 Ga0496109_0056060 3300048912 Bacteria 3596
156 Ga0501031_0032988 3300049568 Bacteria 3376
157 Ga0501031_0197692 3300049568 Bacteria 1312
158 Ga0501032_0089439 3300049569 Bacteria 2044
159 Ga0501032_0118466 3300049569 Bacteria 1751
160 Ga0501033_0015131 3300049570 Bacteria 5854
161 Ga0501033_0188864 3300049570 Bacteria 1475
162 Ga0501036_0001700 3300049572 Bacteria 17086
163 Ga0501036_0029535 3300049572 Bacteria 4631
164 Ga0501036_0040963 3300049572 Bacteria 3919
165 Ga0501036_0131604 3300049572 Bacteria 2112
166 Ga0501036_0192538 3300049572 Bacteria 1716
167 Ga0501036_0618420 3300049572 Bacteria 898
168 Ga0501037_0002772 3300049573 Bacteria 12679
169 Ga0501037_0149503 3300049573 Bacteria 1670
170 Ga0501038_0040716 3300049574 Bacteria 4055
171 Ga0501038_0139413 3300049574 Bacteria 1985
172 Ga0501038_0198778 3300049574 Bacteria 1610
173 Ga0501039_0010298 3300049575 Bacteria 7132
174 Ga0501039_0035289 3300049575 Bacteria 3859
175 Ga0501039_0414139 3300049575 Bacteria 1058
176 Ga0501039_0489708 3300049575 Bacteria 966
177 Ga0501040_0025948 3300049576 Bacteria 3942
178 Ga0501040_0033225 3300049576 Bacteria 3493
179 Ga0501040_0034261 3300049576 Bacteria 3441
180 Ga0501040_0268309 3300049576 Bacteria 1218
181 Ga0501040_0797577 3300049576 Bacteria 683
182 Ga0501041_0029800 3300049577 Bacteria 3292
183 Ga0501041_0036887 3300049577 Bacteria 2961
184 Ga0501041_0480161 3300049577 Bacteria 790
185 Ga0501042_0003533 3300049578 Bacteria 9832
186 Ga0501042_0013642 3300049578 Bacteria 5533
187 Ga0501042_0019539 3300049578 Bacteria 4706
188 Ga0501042_0152224 3300049578 Bacteria 1668
189 Ga0501042_0306503 3300049578 Bacteria 1147
190 Ga0501043_0010845 3300049579 Bacteria 7136
191 Ga0501043_0205330 3300049579 Bacteria 1528
192 Ga0501046_0158279 3300049580 Bacteria 1705
193 Ga0501047_0110453 3300049581 Bacteria 2632
194 Ga0501048_0006625 3300049582 Bacteria 8803
195 Ga0501048_0724008 3300049582 Bacteria 715
196 Ga0501068_0003474 3300049584 Bacteria 8490
197 Ga0501068_0086557 3300049584 Bacteria 1929
198 Ga0501069_0040325 3300049585 Bacteria 2580
199 Ga0501071_0039371 3300049587 Bacteria 3382
200 Ga0501071_0275164 3300049587 Bacteria 1273
201 Ga0501071_0399857 3300049587 Bacteria 1049
202 Ga0501071_0438156 3300049587 Bacteria 1000
203 Ga0501072_0008810 3300049588 Bacteria 7663
204 Ga0501072_0023413 3300049588 Bacteria 4797
205 Ga0501072_0030172 3300049588 Bacteria 4239
206 Ga0501072_0032258 3300049588 Bacteria 4103
207 Ga0501072_0204309 3300049588 Bacteria 1575
208 Ga0501072_0237530 3300049588 Bacteria 1451
209 Ga0501073_0049712 3300049589 Bacteria 2939
210 Ga0501074_0018478 3300049590 Bacteria 5065
211 Ga0501074_0173369 3300049590 Bacteria 1539
212 Ga0501075_0005318 3300049591 Bacteria 8807
213 Ga0501075_0011029 3300049591 Bacteria 6378
214 Ga0501075_0223564 3300049591 Bacteria 1436
215 Ga0501076_0437671 3300049592 Bacteria 1076
216 Ga0501076_0471082 3300049592 Bacteria 1034
217 Ga0501077_0002805 3300049593 Bacteria 10454
218 Ga0501077_0038727 3300049593 Bacteria 3037
219 Ga0501077_0116154 3300049593 Bacteria 1696
220 Ga0501077_0124914 3300049593 Bacteria 1631
221 Ga0501079_0009325 3300049741 Bacteria 7437
222 Ga0501079_0011889 3300049741 Bacteria 6642
223 Ga0501079_0025846 3300049741 Bacteria 4503
224 Ga0501079_0098517 3300049741 Bacteria 2266
225 Ga0501079_0193901 3300049741 Bacteria 1586
226 Ga0501079_0456609 3300049741 Bacteria 1003
227 Ga0501080_0447071 3300049742 Bacteria 1159
228 Ga0501081_0004127 3300049743 Bacteria 9306
229 Ga0501081_0060521 3300049743 Bacteria 2624
230 Ga0501081_0064679 3300049743 Bacteria 2540
231 Ga0501081_0346988 3300049743 Bacteria 1094
232 Ga0501035_0073510 3300049822 Bacteria 3025
233 Ga0501035_0139969 3300049822 Bacteria 2104
234 Ga0501044_0002820 3300049823 Bacteria 19809
235 Ga0501044_0048094 3300049823 Bacteria 4408
236 Ga0501044_1059832 3300049823 Unclassified 681
237 Ga0501045_0018233 3300049824 Bacteria 4991
238 Ga0501045_0056669 3300049824 Bacteria 2866
239 Ga0501045_0062782 3300049824 Bacteria 2726
240 Ga0501045_0105819 3300049824 Bacteria 2085
241 Ga0501045_0145372 3300049824 Bacteria 1764
242 Ga0501045_0234097 3300049824 Bacteria 1367
243 Ga0501045_0325782 3300049824 Bacteria 1143
244 Ga0501045_0504230 3300049824 Bacteria 899
245 nmdc:mga0yw44_590616_c1 3300050492 Bacteria 754
246 nmdc:mga0yw44_85749_c1 3300050492 Bacteria 1982
247 nmdc:mga05p37_143579_c1 3300050507 Bacteria 2924
248 nmdc:mga09592_7557_c1 3300050508 Bacteria 8842
249 nmdc:mga0qj67_2809_c1 3300050509 Bacteria 12487
250 nmdc:mga06r32_12818_c1 3300050510 Bacteria 7577
251 nmdc:mga08y16_223114_c1 3300050511 Bacteria 1950
252 nmdc:mga08y16_32363_c1 3300050511 Bacteria 5499
253 Ga0501084_0008564 3300054114 Bacteria 8457
254 Ga0501084_0058056 3300054114 Bacteria 3237
255 Ga0501084_0067733 3300054114 Bacteria 2988
256 Ga0501084_0071760 3300054114 Bacteria 2900
257 Ga0501082_0010334 3300060353 Bacteria 8034
258 Ga0501082_0267625 3300060353 Bacteria 1487
259 Ga0466962_0081702 3300061719 Bacteria 1545
260 Ga0466962_0106927 3300061719 Bacteria 1346
261 Ga0530510_0007725 3300061734 Bacteria 7489
262 Ga0530510_0008346 3300061734 Bacteria 7221
263 Ga0530510_0015496 3300061734 Bacteria 5389
264 Ga0530510_0045453 3300061734 Bacteria 3172
265 Ga0530510_0075282 3300061734 Bacteria 2452
266 Ga0501047_0163286
267 Ga0070683_100003555
268 Ga0070683_100308832
269 Ga0070682_100292025
270 Ga0068868_100271133
271 Ga0070691_10017564
272 Ga0070691_10065164
273 Ga0070687_100050308
274 Ga0070675_100036792
275 Ga0070688_100613547
276 Ga0070659_100360762
277 Ga0070714_100253366
278 Ga0070714_100301785
279 Ga0070713_100007676
280 Ga0070713_100507939
281 Ga0070711_100061358
282 Ga0070700_100058000
283 Ga0070708_100277149
284 Ga0070678_100257115
285 Ga0070678_100544571
286 Ga0070681_10153703
287 Ga0070698_100523484
288 Ga0070679_100045545
289 Ga0070684_100011634
290 Ga0068853_101221376
291 Ga0070696_100287054
292 Ga0070693_100223729
293 Ga0070704_100603531
294 Ga0070664_100587942
295 Ga0068857_100017502
296 Ga0068854_100284357
297 Ga0068856_100308033
298 Ga0068856_100446532
299 Ga0070702_100020483
300 Ga0068851_10163241
301 Ga0068870_10271925
302 Ga0070717_10000345
303 Ga0070717_10189490
304 Ga0075365_10207684
305 Ga0075430_100004537
306 Ga0075431_100001309
307 Ga0075429_100013244
308 Ga0111539_10191238
309 Ga0111539_10332275
310 Ga0105245_10119043
311 Ga0114129_10065320
312 Ga0105243_10308020
313 Ga0105248_11043445
314 Ga0105249_10641962
315 Ga0105246_10295524
316 Ga0157372_10107176
317 Ga0157372_10741831
318 Ga0157375_10595331
319 Ga0157380_10166163
320 Ga0157377_10049368
321 Ga0157379_11017238
322 Ga0206351_10909920
323 Ga0213874_10000128
324 Ga0224712_10010371
325 Ga0207688_10070740
326 Ga0207699_10106362
327 Ga0207693_10366569
328 Ga0207660_10216726
329 Ga0207662_10046595
330 Ga0207659_10019285
331 Ga0207687_10191114
332 Ga0207687_10622885
333 Ga0207700_10451106
334 Ga0207664_10738149
335 Ga0207704_10517571
336 Ga0207689_10102023
337 Ga0207640_10149013
338 Ga0207640_10675798
339 Ga0207677_10346173
340 Ga0207708_10090006
341 Ga0207702_10440475
342 Ga0207674_10012077
343 Ga0207675_100189750
344 Ga0207683_10086794
345 Ga0207683_10236977
346 Ga0207698_10510180
347 Ga0207698_10705740
348 Ga0207698_10881892
349 Ga0209966_1047018
350 Ga0207428_10026115
351 Ga0265338_10014277
352 Ga0265327_10010570
353 Ga0316575_10120075
354 Ga0316575_10136666
355 Ga0307413_10076136
356 Ga0316212_1001121
357 Ga0316574_0157455
358 Ga0316574_0212648
359 Ga0373947_0180130
360 Ga0395900_0339205
361 Ga0395898_0254392
362 Ga0436364_0152180
363 Ga0395901_0463273
364 Ga0436365_1047856
365 Ga0436363_0303036
366 Ga0436363_1140580
367 Ga0436362_1067121
368 Ga0439439_0000233
369 Ga0439433_0007411
370 Ga0439448_0013484
371 Ga0439457_034318
372 Ga0439462_0050957
373 Ga0439446_0005887
374 Ga0439444_0076474
375 Ga0466969_0072518
376 Ga0466961_0005568
377 Ga0466963_0032828
378 Ga0466963_0069518
379 Ga0466971_0084881
380 Ga0466970_0097954
381 Ga0466957_0006997
382 Ga0466960_0006921
383 Ga0466959_0348653
384 Ga0466958_0056173
385 Ga0466958_0387186
386 Ga0466967_0297220
387 Ga0466967_0307661
388 Ga0466967_0356217
389 Ga0466967_0667222
390 Ga0466967_0782376
391 Ga0495603_0195073
392 Ga0495629_0166950
393 Ga0495582_0078625
394 Ga0495582_0118665
395 Ga0495662_0029985
396 Ga0495664_0063242
397 Ga0495584_0079970
398 Ga0495594_0031527
399 Ga0495630_0017649
400 Ga0495663_0022995
401 Ga0495656_0056348
402 Ga0495656_0267361
403 Ga0495668_0112257
404 Ga0495634_0110670
405 Ga0495611_0129023
406 Ga0495599_0242636
407 Ga0495658_0066175
408 Ga0495669_0037713
409 Ga0495671_0164546
410 Ga0495660_0189569
411 Ga0495581_0036717
412 Ga0495674_0038318
413 Ga0495676_0009387
414 Ga0495676_0022561
415 Ga0495686_0371896
416 Ga0495626_0080119
417 Ga0496102_0190571
418 Ga0496107_0137521
419 Ga0496108_0574614
420 Ga0496109_0056060
421 Ga0501031_0032988
422 Ga0501031_0197692
423 Ga0501032_0089439
424 Ga0501032_0118466
425 Ga0501033_0015131
426 Ga0501033_0188864
427 Ga0501036_0001700
428 Ga0501036_0029535
429 Ga0501036_0040963
430 Ga0501036_0131604
431 Ga0501036_0192538
432 Ga0501036_0618420
433 Ga0501037_0002772
434 Ga0501037_0149503
435 Ga0501038_0040716
436 Ga0501038_0139413
437 Ga0501038_0198778
438 Ga0501039_0010298
439 Ga0501039_0035289
440 Ga0501039_0414139
441 Ga0501039_0489708
442 Ga0501040_0025948
443 Ga0501040_0033225
444 Ga0501040_0034261
445 Ga0501040_0268309
446 Ga0501040_0797577
447 Ga0501041_0029800
448 Ga0501041_0036887
449 Ga0501041_0480161
450 Ga0501042_0003533
451 Ga0501042_0013642
452 Ga0501042_0019539
453 Ga0501042_0152224
454 Ga0501042_0306503
455 Ga0501043_0010845
456 Ga0501043_0205330
457 Ga0501046_0158279
458 Ga0501047_0110453
459 Ga0501048_0006625
460 Ga0501048_0724008
461 Ga0501068_0003474
462 Ga0501068_0086557
463 Ga0501069_0040325
464 Ga0501071_0039371
465 Ga0501071_0275164
466 Ga0501071_0399857
467 Ga0501071_0438156
468 Ga0501072_0008810
469 Ga0501072_0023413
470 Ga0501072_0030172
471 Ga0501072_0032258
472 Ga0501072_0204309
473 Ga0501072_0237530
474 Ga0501073_0049712
475 Ga0501074_0018478
476 Ga0501074_0173369
477 Ga0501075_0005318
478 Ga0501075_0011029
479 Ga0501075_0223564
480 Ga0501076_0437671
481 Ga0501076_0471082
482 Ga0501077_0002805
483 Ga0501077_0038727
484 Ga0501077_0116154
485 Ga0501077_0124914
486 Ga0501079_0009325
487 Ga0501079_0011889
488 Ga0501079_0025846
489 Ga0501079_0098517
490 Ga0501079_0193901
491 Ga0501079_0456609
492 Ga0501080_0447071
493 Ga0501081_0004127
494 Ga0501081_0060521
495 Ga0501081_0064679
496 Ga0501081_0346988
497 Ga0501035_0073510
498 Ga0501035_0139969
499 Ga0501044_0002820
500 Ga0501044_0048094
501 Ga0501044_1059832
502 Ga0501045_0018233
503 Ga0501045_0056669
504 Ga0501045_0062782
505 Ga0501045_0105819
506 Ga0501045_0145372
507 Ga0501045_0234097
508 Ga0501045_0325782
509 Ga0501045_0504230
510 nmdc:mga0yw44_590616_c1
511 nmdc:mga0yw44_85749_c1
512 nmdc:mga05p37_143579_c1
513 nmdc:mga09592_7557_c1
514 nmdc:mga0qj67_2809_c1
515 nmdc:mga06r32_12818_c1
516 nmdc:mga08y16_223114_c1
517 nmdc:mga08y16_32363_c1
518 Ga0501084_0008564
519 Ga0501084_0058056
520 Ga0501084_0067733
521 Ga0501084_0071760
522 Ga0501082_0010334
523 Ga0501082_0267625
524 Ga0466962_0081702
525 Ga0466962_0106927
526 Ga0530510_0007725
527 Ga0530510_0008346
528 Ga0530510_0015496
529 Ga0530510_0045453
530 Ga0530510_0075282

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

5

117

0.98

PF00196

GerE

Bacterial regulatory proteins, luxR family

151

207

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9906 151 212
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9903 149 212
4wsz-assembly1.cif.gz_A crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9892 149 212
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9829 148 212
1zlj-assembly2.cif.gz_C crystal structure of the mycobacterium tuberculosis hypoxic response regulator dosr c-terminal domain 0.9816 153 207
ID Description Score Start End Superfamily
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9881 153 209 1.10.10.10
1zlkB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9707 150 207 1.10.10.10
6ekhY00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9645 1 119 3.40.50.2300
4if4C02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.964 147 212 1.10.10.10
3eulC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9634 2 120 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A367FPF4-F1-model_v4 DNA-binding response regulator 0.971 3 212 GO:0000160
GO:0003677
GO:0006355
AF-A0A5S4EYX3-F1-model_v4 Response regulator 0.9698 2 212 GO:0000155
GO:0003677
GO:0006355
GO:0016020
GO:0046983
AF-A0A1G9CT70-F1-model_v4 DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains 0.9586 2 214 GO:0000160
GO:0003677
GO:0006355
AF-A0A3N2HWD2-F1-model_v4 DNA-binding NarL/FixJ family response regulator 0.9573 2 212 GO:0000160
GO:0003677
GO:0006355
AF-A0A2G7DLY5-F1-model_v4 deleted 0.9572 1 212

Map