F373435

General Info

Members Datasets Scaffolds Average Seq Length
265 191 530 345

Family's Representative Sequence

Representative Sequence 3300031731|Ga0307405_10000293|Ga0307405_100002937
Length 374
Sequence MAKSTGAASRGPSEERARPRRSQTGIELEVAGHTLRVTNPEKMYFAQRGFTKLDVVNYYIAVGDGILRALYERPTTLERWPGGVVEGAKLSTRQDHTGDAFYQKRIPTKGVPPWIETAQIKFPSMRTADELCPVDLGHVAWAAQLGTIVFHAWPVRRSDTDSPDELRIDLDPQPGTDFADAVAAAEEVRGVLADLGWIGFPKTSGGRGIHVYVRIGPQWSFTEVRRAAIALAREVERRRPDRVTTNWWKEERGQRVFIDFNQMARDRTIACAYSLRANQRATVSTPVTWDELAGVDPDDFTLETVQKRIAEIGDPHATINDVAHDITPLLEWSERDERDGLGDMPYPPDHPKMPGEPPRVQPSRKNPKNWESTD

Samples

Sample ID Description Type Environment
1 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
76 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
77 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
78 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
79 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
80 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
87 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
88 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
89 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
90 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
91 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
92 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
96 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
97 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
98 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
99 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
100 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
101 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
102 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
103 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
104 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
118 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
119 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
120 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
121 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
124 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
125 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
126 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
127 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
128 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
129 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
131 2501939600 Micromonospora sp. L5 Isolate Unclassified
132 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
133 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
134 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
135 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
136 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
137 2517572101 Frankia sp. DC12 Isolate Nodule
138 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
139 2671180195 Frankia sp. CcI49 Isolate Nodule
140 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
141 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
142 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
143 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
144 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
145 2773857922 Frankia sp. CcI49 Isolate Nodule
146 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
147 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
148 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
149 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
150 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
151 2855683550 Micromonospora sp. RP3T Isolate Unclassified
152 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
153 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
154 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
155 2858868258 Micromonospora sp. MH33 Isolate Unclassified
156 2858882152 Micromonospora noduli MED15 Isolate Nodule
157 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
158 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
159 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
160 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
161 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
162 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
163 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
164 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
165 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
166 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
167 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
168 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
169 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
170 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
171 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
172 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
173 2902582711 Micromonospora sp. AP08 Isolate Unclassified
174 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
175 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
176 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
177 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
178 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
179 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
180 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
181 649633069 Micromonospora sp. L5 Isolate Unclassified
182 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
183 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
184 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
185 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
186 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
187 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
188 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
189 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
190 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
191 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 76.6
Metatranscriptomes 0.38
Isolates 23.02

Biome Distribution

Category Percentage (%)
Aerial Root 0.75
Bulb 0
Endosphere 2.64
Nodule 3.4
Rhizoplane 4.15
Rhizosphere 67.17
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307405_10000293 3300031731 Bacteria 18487
2 JGI25406J46586_10002620 3300003203 Bacteria 8482
3 Ga0070658_10056055 3300005327 Bacteria 3202
4 Ga0070676_10024930 3300005328 Bacteria 3375
5 Ga0070683_100000951 3300005329 Bacteria 21575
6 Ga0070683_100284825 3300005329 Bacteria 1572
7 Ga0070682_100037049 3300005337 Bacteria 2984
8 Ga0070682_100150795 3300005337 Bacteria 1595
9 Ga0068868_100208518 3300005338 Bacteria 1632
10 Ga0070660_100373835 3300005339 Bacteria 1176
11 Ga0070661_100012736 3300005344 Bacteria 5886
12 Ga0070668_100000476 3300005347 Bacteria 26561
13 Ga0070675_100008872 3300005354 Bacteria 7818
14 Ga0070659_100035474 3300005366 Bacteria 3884
15 Ga0070713_100050350 3300005436 Bacteria 3441
16 Ga0070700_100016932 3300005441 Bacteria 4159
17 Ga0070663_100057934 3300005455 Bacteria 2781
18 Ga0070663_100078631 3300005455 Bacteria 2418
19 Ga0070678_100013184 3300005456 Bacteria 5172
20 Ga0070681_10134593 3300005458 Bacteria 2402
21 Ga0070706_100139246 3300005467 Bacteria 2265
22 Ga0070684_100018936 3300005535 Bacteria 5686
23 Ga0070684_100033833 3300005535 Bacteria 4367
24 Ga0070684_100065083 3300005535 Bacteria 3199
25 Ga0070665_100040994 3300005548 Bacteria 4653
26 Ga0070665_100058472 3300005548 Bacteria 3865
27 Ga0070665_100088493 3300005548 Bacteria 3103
28 Ga0070664_100027518 3300005564 Bacteria 4725
29 Ga0070664_100290027 3300005564 Bacteria 1477
30 Ga0068857_100119888 3300005577 Bacteria 2368
31 Ga0068856_100173015 3300005614 Bacteria 2172
32 Ga0068864_100065088 3300005618 Bacteria 3162
33 Ga0068863_100079621 3300005841 Bacteria 3103
34 Ga0068858_100215750 3300005842 Bacteria 1817
35 Ga0068860_100086537 3300005843 Bacteria 2982
36 Ga0081455_10000201 3300005937 Bacteria 76008
37 Ga0081540_1002315 3300005983 Bacteria 15610
38 Ga0081540_1018359 3300005983 Bacteria 4293
39 Ga0081539_10001076 3300005985 Bacteria 49708
40 Ga0081539_10001422 3300005985 Bacteria 41133
41 Ga0081539_10002104 3300005985 Bacteria 29635
42 Ga0081539_10008276 3300005985 Bacteria 9117
43 Ga0081539_10032695 3300005985 Bacteria 3182
44 Ga0081539_10034733 3300005985 Bacteria 3042
45 Ga0070717_10111356 3300006028 Bacteria 2336
46 Ga0097621_100236853 3300006237 Bacteria 1595
47 Ga0075428_100000249 3300006844 Bacteria 52754
48 Ga0075428_100007316 3300006844 Bacteria 12230
49 Ga0075428_100011580 3300006844 Bacteria 9813
50 Ga0075428_100272469 3300006844 Bacteria 1821
51 Ga0075430_100000302 3300006846 Bacteria 34911
52 Ga0075430_100001565 3300006846 Bacteria 18738
53 Ga0075430_100007719 3300006846 Bacteria 9089
54 Ga0075430_100016425 3300006846 Bacteria 6302
55 Ga0075431_100012154 3300006847 Bacteria 8685
56 Ga0075431_100032761 3300006847 Bacteria 5356
57 Ga0075431_100174800 3300006847 Bacteria 2206
58 Ga0075429_100022594 3300006880 Bacteria 5452
59 Ga0075429_100034205 3300006880 Bacteria 4415
60 Ga0111539_10038747 3300009094 Bacteria 5750
61 Ga0111539_10109980 3300009094 Bacteria 3234
62 Ga0105245_10077325 3300009098 Bacteria 3034
63 Ga0105245_10123128 3300009098 Bacteria 2425
64 Ga0105247_10147117 3300009101 Bacteria 1549
65 Ga0114129_10000352 3300009147 Bacteria 53517
66 Ga0114129_10000391 3300009147 Bacteria 51146
67 Ga0114129_10016281 3300009147 Bacteria 10584
68 Ga0114129_10329604 3300009147 Bacteria 2027
69 Ga0105248_10000189 3300009177 Bacteria 71316
70 Ga0105248_10322624 3300009177 Bacteria 1739
71 Ga0105248_10626019 3300009177 Bacteria 1214
72 Ga0105238_10358831 3300009551 Bacteria 1447
73 Ga0105239_10211459 3300010375 Bacteria 2174
74 Ga0157369_10067809 3300013105 Bacteria 3834
75 Ga0157372_10843154 3300013307 Bacteria 1064
76 Ga0163163_10090011 3300014325 Bacteria 3082
77 Ga0163163_10219282 3300014325 Bacteria 1951
78 Ga0163163_10372317 3300014325 Bacteria 1485
79 Ga0163163_10523808 3300014325 Bacteria 1248
80 Ga0157377_10023617 3300014745 Bacteria 3261
81 Ga0206353_10499891 3300020082 Bacteria 3063
82 Ga0207684_10215140 3300025910 Bacteria 1658
83 Ga0207693_10096348 3300025915 Bacteria 2320
84 Ga0207660_10025310 3300025917 Bacteria 4027
85 Ga0207657_10082853 3300025919 Bacteria 2691
86 Ga0207649_10006298 3300025920 Bacteria 6445
87 Ga0207659_10101510 3300025926 Bacteria 2170
88 Ga0207687_10064887 3300025927 Bacteria 2591
89 Ga0207687_10148062 3300025927 Bacteria 1788
90 Ga0207700_10117659 3300025928 Bacteria 2150
91 Ga0207690_10052033 3300025932 Bacteria 2742
92 Ga0207706_10223269 3300025933 Bacteria 1649
93 Ga0207711_10000425 3300025941 Bacteria 44288
94 Ga0207711_10018588 3300025941 Bacteria 5778
95 Ga0207689_10173308 3300025942 Bacteria 1779
96 Ga0207661_10001723 3300025944 Bacteria 14966
97 Ga0207661_10235353 3300025944 Bacteria 1623
98 Ga0207661_10427545 3300025944 Bacteria 1204
99 Ga0207679_10131551 3300025945 Bacteria 2008
100 Ga0207668_10007166 3300025972 Bacteria 6623
101 Ga0207658_10382672 3300025986 Bacteria 1233
102 Ga0207677_10218613 3300026023 Bacteria 1526
103 Ga0207678_10075684 3300026067 Bacteria 2884
104 Ga0207678_10097024 3300026067 Bacteria 2519
105 Ga0207708_10007431 3300026075 Bacteria 8099
106 Ga0207641_10016771 3300026088 Bacteria 5999
107 Ga0207674_10037927 3300026116 Bacteria 5006
108 Ga0207683_10022632 3300026121 Bacteria 5397
109 Ga0268266_10053420 3300028379 Bacteria 3471
110 Ga0268266_10337246 3300028379 Bacteria 1414
111 Ga0268264_10196635 3300028381 Bacteria 1841
112 Ga0307517_10193347 3300028786 Bacteria 1286
113 Ga0307515_10000146 3300028794 Bacteria 170674
114 Ga0307515_10018185 3300028794 Bacteria 12749
115 Ga0307512_10165486 3300030522 Bacteria 1282
116 Ga0307513_10016475 3300031456 Bacteria 8910
117 Ga0307513_10020449 3300031456 Bacteria 7852
118 Ga0307513_10023680 3300031456 Bacteria 7167
119 Ga0307509_10042031 3300031507 Bacteria 4955
120 Ga0307508_10000877 3300031616 Bacteria 35003
121 Ga0307508_10074799 3300031616 Bacteria 2964
122 Ga0307516_10000787 3300031730 Bacteria 43326
123 Ga0307516_10011300 3300031730 Bacteria 9721
124 Ga0307516_10040468 3300031730 Bacteria 4639
125 Ga0326468_10000373 3300031889 Bacteria 4732
126 Ga0307407_10071305 3300031903 Bacteria 2068
127 Ga0307407_10142390 3300031903 Bacteria 1548
128 Ga0307409_100004258 3300031995 Bacteria 7993
129 Ga0307409_100006840 3300031995 Bacteria 6753
130 Ga0307409_100206877 3300031995 Bacteria 1760
131 Ga0307416_100017814 3300032002 Bacteria 4983
132 Ga0307416_100070474 3300032002 Bacteria 2899
133 Ga0307416_100317253 3300032002 Bacteria 1559
134 Ga0307416_100342810 3300032002 Bacteria 1508
135 Ga0307416_100379290 3300032002 Bacteria 1443
136 Ga0307411_10076543 3300032005 Bacteria 2288
137 Ga0307411_10222940 3300032005 Bacteria 1464
138 Ga0307415_100000007 3300032126 Bacteria 94604
139 Ga0307415_100107968 3300032126 Bacteria 2058
140 Ga0307415_100290914 3300032126 Bacteria 1348
141 Ga0307507_10184701 3300033179 Bacteria 1481
142 Ga0373938_0031549 3300034957 Bacteria 1137
143 Ga0373951_0000162 3300035091 Bacteria 24397
144 Ga0373942_0003543 3300035207 Bacteria 3661
145 Ga0373962_0046926 3300035242 Bacteria 1234
146 Ga0373935_0024088 3300035692 Bacteria 3744
147 Ga0373937_0133682 3300036401 Bacteria 2318
148 Ga0373937_0223901 3300036401 Bacteria 1771
149 Ga0395898_0025441 3300037466 Bacteria 5964
150 Ga0395905_0024755 3300037471 Bacteria 5665
151 Ga0395905_0054830 3300037471 Bacteria 3730
152 Ga0395901_0088934 3300038443 Bacteria 3231
153 Ga0451791_0058790 3300041451 Bacteria 4123
154 Ga0451793_0478928 3300041452 Bacteria 9659
155 Ga0451797_0313511 3300041453 Bacteria 1454
156 Ga0451841_0384593 3300041498 Bacteria 1969
157 Ga0451855_0543252 3300041511 Bacteria 2252
158 Ga0451853_0299949 3300041512 Bacteria 3803
159 Ga0451853_0711985 3300041512 Bacteria 3353
160 Ga0451853_1185331 3300041512 Bacteria 3583
161 Ga0466967_0122143 3300045976 Bacteria 2408
162 Ga0466967_0181393 3300045976 Bacteria 1986
163 Ga0495629_0073273 3300046459 Bacteria 2392
164 Ga0495594_0005293 3300046499 Bacteria 6625
165 Ga0495665_0040020 3300046531 Bacteria 2496
166 Ga0495581_0050530 3300047315 Bacteria 2401
167 Ga0496104_0106314 3300048907 Bacteria 2689
168 Ga0496105_0063860 3300048908 Bacteria 3038
169 Ga0496108_0000198 3300048911 Bacteria 55637
170 Ga0496108_0074984 3300048911 Bacteria 2857
171 Ga0496109_0029764 3300048912 Bacteria 4892
172 Ga0496112_0065309 3300048915 Bacteria 3591
173 Ga0496112_0133460 3300048915 Bacteria 2453
174 Ga0496112_0460675 3300048915 Bacteria 1209
175 Ga0496117_0029817 3300048920 Bacteria 4199
176 Ga0496118_0002424 3300048921 Bacteria 25130
177 Ga0496121_0061256 3300048924 Bacteria 3089
178 Ga0496126_0116517 3300048929 Bacteria 2322
179 Ga0501047_0026943 3300049581 Bacteria 5534
180 nmdc:mga05p37_171361_c1 3300050507 Bacteria 2647
181 nmdc:mga05p37_24_c1 3300050507 Bacteria 118187
182 nmdc:mga05p37_370_c1 3300050507 Bacteria 48311
183 nmdc:mga09592_16633_c1 3300050508 Bacteria 6020
184 nmdc:mga09592_254731_c1 3300050508 Bacteria 1521
185 nmdc:mga09592_72443_c1 3300050508 Bacteria 2925
186 nmdc:mga09592_735_c1 3300050508 Bacteria 25241
187 nmdc:mga0qj67_256_c1 3300050509 Bacteria 36383
188 nmdc:mga0qj67_29095_c1 3300050509 Bacteria 4291
189 nmdc:mga0qj67_57_c2 3300050509 Bacteria 38742
190 nmdc:mga06r32_210099_c1 3300050510 Bacteria 1934
191 nmdc:mga06r32_22_c1 3300050510 Bacteria 54748
192 nmdc:mga06r32_297811_c1 3300050510 Bacteria 1599
193 nmdc:mga06r32_74666_c1 3300050510 Bacteria 3288
194 nmdc:mga08y16_63857_c1 3300050511 Bacteria 3846
195 nmdc:mga08y16_7864_c1 3300050511 Bacteria 11162
196 Ga0495619_0041784 3300053085 Bacteria 3000
197 Ga0500646_0001321 3300053090 Bacteria 6584
198 Ga0500651_0116339 3300053093 Bacteria 1627
199 Ga0500650_0056040 3300053098 Bacteria 1836
200 Ga0500652_041124 3300053131 Bacteria 1860
201 Ga0500588_0001144 3300053146 Bacteria 4874
202 Ga0500600_0068897 3300053149 Bacteria 1946
203 Ga0500630_092842 3300053159 Bacteria 1391
204 Ga0530510_0040366 3300061734 Bacteria 3368
205 2501940847 2501939600 Bacteria 6907073
206 2515494249 2515154088 Bacteria 5526283
207 2515722075 2515154129 Bacteria 5584369
208 2515758137 2515154137 Bacteria 5711575
209 2516085701 2515154202 Bacteria 5471270
210 2516090506 2515154203 Bacteria 5458536
211 2517761322 2517572101 Bacteria 6884336
212 2623587429 2622736626 Bacteria 7181580
213 2671836254 2671180195 Bacteria 9757215
214 2676481988 2675903059 Bacteria 8644972
215 2686538823 2684623035 Bacteria 8032739
216 2739205947 2738543005 Bacteria 5278128
217 2753262569 2751185782 Bacteria 11227053
218 2772643887 2772190715 Bacteria 6959372
219 2774854410 2773857922 Bacteria 9757215
220 2804849074 2802429296 Bacteria 7227771
221 2831938126 2831935698 Bacteria 5963223
222 2832010917 2832004796 Bacteria 6538017
223 2855672873 2855670206 Bacteria 7120389
224 2855677328 2855676851 Bacteria 7063653
225 2855686105 2855683550 Bacteria 7134265
226 2856861299 2856858025 Bacteria 7255264
227 2857295328 2857288857 Bacteria 7189066
228 2858855505 2858848962 Bacteria 6963058
229 2858870814 2858868258 Bacteria 7683772
230 2858885402 2858882152 Bacteria 7230291
231 2858892274 2858888857 Bacteria 7060307
232 2858902111 2858895516 Bacteria 7378898
233 2858904000 2858902515 Bacteria 7086037
234 2866069025 2866065130 Bacteria 6518152
235 2867305785 2867302475 Bacteria 7087181
236 2867315425 2867312974 Bacteria 7058875
237 2867325553 2867319477 Bacteria 7069771
238 2867510313 2867507094 Bacteria 6506033
239 2869051131 2869048445 Bacteria 6875584
240 2869063263 2869061728 Bacteria 7112407
241 2869072379 2869068681 Bacteria 7205615
242 2873318726 2873314349 Bacteria 8512634
243 2880492804 2880489317 Bacteria 7096270
244 2880499506 2880495981 Bacteria 7340502
245 2895442764 2895442618 Bacteria 11027144
246 2895890173 2895880812 Bacteria 11255272
247 2902587773 2902582711 Bacteria 6187705
248 2928143691 2928142448 Bacteria 5288925
249 2929221476 2929219909 Bacteria 6984360
250 2929228106 2929226422 Bacteria 7248583
251 2984579656 2984576629 Bacteria 4248407
252 2990257263 2990256926 Bacteria 4252839
253 2996226818 2996221748 Bacteria 6799777
254 3001891322 3001889506 Bacteria 2975194
255 649812054 649633069 Bacteria 6962533
256 8003831483 8003830390 Bacteria 6541657
257 8003861913 8003856774 Bacteria 7675274
258 8003877827 8003870546 Bacteria 7396674
259 8025418412 8025413630 Bacteria 7014048
260 8054706029 8054704163 Bacteria 7247792
261 8054732153 8054727385 Bacteria 7558670
262 8054740977 8054734606 Bacteria 6947278
263 8055073459 8055066027 Bacteria 9479577
264 8055174331 8055172936 Bacteria 9305943
265 8055414299 8055412473 Bacteria 6257500
266 Ga0307405_10000293
267 JGI25406J46586_10002620
268 Ga0070658_10056055
269 Ga0070676_10024930
270 Ga0070683_100000951
271 Ga0070683_100284825
272 Ga0070682_100037049
273 Ga0070682_100150795
274 Ga0068868_100208518
275 Ga0070660_100373835
276 Ga0070661_100012736
277 Ga0070668_100000476
278 Ga0070675_100008872
279 Ga0070659_100035474
280 Ga0070713_100050350
281 Ga0070700_100016932
282 Ga0070663_100057934
283 Ga0070663_100078631
284 Ga0070678_100013184
285 Ga0070681_10134593
286 Ga0070706_100139246
287 Ga0070684_100018936
288 Ga0070684_100033833
289 Ga0070684_100065083
290 Ga0070665_100040994
291 Ga0070665_100058472
292 Ga0070665_100088493
293 Ga0070664_100027518
294 Ga0070664_100290027
295 Ga0068857_100119888
296 Ga0068856_100173015
297 Ga0068864_100065088
298 Ga0068863_100079621
299 Ga0068858_100215750
300 Ga0068860_100086537
301 Ga0081455_10000201
302 Ga0081540_1002315
303 Ga0081540_1018359
304 Ga0081539_10001076
305 Ga0081539_10001422
306 Ga0081539_10002104
307 Ga0081539_10008276
308 Ga0081539_10032695
309 Ga0081539_10034733
310 Ga0070717_10111356
311 Ga0097621_100236853
312 Ga0075428_100000249
313 Ga0075428_100007316
314 Ga0075428_100011580
315 Ga0075428_100272469
316 Ga0075430_100000302
317 Ga0075430_100001565
318 Ga0075430_100007719
319 Ga0075430_100016425
320 Ga0075431_100012154
321 Ga0075431_100032761
322 Ga0075431_100174800
323 Ga0075429_100022594
324 Ga0075429_100034205
325 Ga0111539_10038747
326 Ga0111539_10109980
327 Ga0105245_10077325
328 Ga0105245_10123128
329 Ga0105247_10147117
330 Ga0114129_10000352
331 Ga0114129_10000391
332 Ga0114129_10016281
333 Ga0114129_10329604
334 Ga0105248_10000189
335 Ga0105248_10322624
336 Ga0105248_10626019
337 Ga0105238_10358831
338 Ga0105239_10211459
339 Ga0157369_10067809
340 Ga0157372_10843154
341 Ga0163163_10090011
342 Ga0163163_10219282
343 Ga0163163_10372317
344 Ga0163163_10523808
345 Ga0157377_10023617
346 Ga0206353_10499891
347 Ga0207684_10215140
348 Ga0207693_10096348
349 Ga0207660_10025310
350 Ga0207657_10082853
351 Ga0207649_10006298
352 Ga0207659_10101510
353 Ga0207687_10064887
354 Ga0207687_10148062
355 Ga0207700_10117659
356 Ga0207690_10052033
357 Ga0207706_10223269
358 Ga0207711_10000425
359 Ga0207711_10018588
360 Ga0207689_10173308
361 Ga0207661_10001723
362 Ga0207661_10235353
363 Ga0207661_10427545
364 Ga0207679_10131551
365 Ga0207668_10007166
366 Ga0207658_10382672
367 Ga0207677_10218613
368 Ga0207678_10075684
369 Ga0207678_10097024
370 Ga0207708_10007431
371 Ga0207641_10016771
372 Ga0207674_10037927
373 Ga0207683_10022632
374 Ga0268266_10053420
375 Ga0268266_10337246
376 Ga0268264_10196635
377 Ga0307517_10193347
378 Ga0307515_10000146
379 Ga0307515_10018185
380 Ga0307512_10165486
381 Ga0307513_10016475
382 Ga0307513_10020449
383 Ga0307513_10023680
384 Ga0307509_10042031
385 Ga0307508_10000877
386 Ga0307508_10074799
387 Ga0307516_10000787
388 Ga0307516_10011300
389 Ga0307516_10040468
390 Ga0326468_10000373
391 Ga0307407_10071305
392 Ga0307407_10142390
393 Ga0307409_100004258
394 Ga0307409_100006840
395 Ga0307409_100206877
396 Ga0307416_100017814
397 Ga0307416_100070474
398 Ga0307416_100317253
399 Ga0307416_100342810
400 Ga0307416_100379290
401 Ga0307411_10076543
402 Ga0307411_10222940
403 Ga0307415_100000007
404 Ga0307415_100107968
405 Ga0307415_100290914
406 Ga0307507_10184701
407 Ga0373938_0031549
408 Ga0373951_0000162
409 Ga0373942_0003543
410 Ga0373962_0046926
411 Ga0373935_0024088
412 Ga0373937_0133682
413 Ga0373937_0223901
414 Ga0395898_0025441
415 Ga0395905_0024755
416 Ga0395905_0054830
417 Ga0395901_0088934
418 Ga0451791_0058790
419 Ga0451793_0478928
420 Ga0451797_0313511
421 Ga0451841_0384593
422 Ga0451855_0543252
423 Ga0451853_0299949
424 Ga0451853_0711985
425 Ga0451853_1185331
426 Ga0466967_0122143
427 Ga0466967_0181393
428 Ga0495629_0073273
429 Ga0495594_0005293
430 Ga0495665_0040020
431 Ga0495581_0050530
432 Ga0496104_0106314
433 Ga0496105_0063860
434 Ga0496108_0000198
435 Ga0496108_0074984
436 Ga0496109_0029764
437 Ga0496112_0065309
438 Ga0496112_0133460
439 Ga0496112_0460675
440 Ga0496117_0029817
441 Ga0496118_0002424
442 Ga0496121_0061256
443 Ga0496126_0116517
444 Ga0501047_0026943
445 nmdc:mga05p37_171361_c1
446 nmdc:mga05p37_24_c1
447 nmdc:mga05p37_370_c1
448 nmdc:mga09592_16633_c1
449 nmdc:mga09592_254731_c1
450 nmdc:mga09592_72443_c1
451 nmdc:mga09592_735_c1
452 nmdc:mga0qj67_256_c1
453 nmdc:mga0qj67_29095_c1
454 nmdc:mga0qj67_57_c2
455 nmdc:mga06r32_210099_c1
456 nmdc:mga06r32_22_c1
457 nmdc:mga06r32_297811_c1
458 nmdc:mga06r32_74666_c1
459 nmdc:mga08y16_63857_c1
460 nmdc:mga08y16_7864_c1
461 Ga0495619_0041784
462 Ga0500646_0001321
463 Ga0500651_0116339
464 Ga0500650_0056040
465 Ga0500652_041124
466 Ga0500588_0001144
467 Ga0500600_0068897
468 Ga0500630_092842
469 Ga0530510_0040366
470 2501940847
471 2515494249
472 2515722075
473 2515758137
474 2516085701
475 2516090506
476 2517761322
477 2623587429
478 2671836254
479 2676481988
480 2686538823
481 2739205947
482 2753262569
483 2772643887
484 2774854410
485 2804849074
486 2831938126
487 2832010917
488 2855672873
489 2855677328
490 2855686105
491 2856861299
492 2857295328
493 2858855505
494 2858870814
495 2858885402
496 2858892274
497 2858902111
498 2858904000
499 2866069025
500 2867305785
501 2867315425
502 2867325553
503 2867510313
504 2869051131
505 2869063263
506 2869072379
507 2873318726
508 2880492804
509 2880499506
510 2895442764
511 2895890173
512 2902587773
513 2928143691
514 2929221476
515 2929228106
516 2984579656
517 2990257263
518 2996226818
519 3001891322
520 649812054
521 8003831483
522 8003861913
523 8003877827
524 8025418412
525 8054706029
526 8054732153
527 8054740977
528 8055073459
529 8055174331
530 8055414299

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01896

DNA_primase_S

DNA primase small subunit

168

289

0.97

PF21686

LigD_Prim-Pol

LigD, primase-polymerase domain

51

316

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sa1-assembly1.cif.gz_A post catalytic complex of prim-polc from mycobacterium smegmatis with gapped dna and 3'-dutp 0.9646 5 329
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9578 7 294
6sa1-assembly1.cif.gz_A post catalytic complex of prim-polc from mycobacterium smegmatis with gapped dna and 3'-dutp 0.953 5 329
2iry-assembly1.cif.gz_A crystal structure of the polymerase domain from mycobacterium tuberculosis ligase d with dgtp and manganese. 0.9303 15 290
5dmu-assembly1.cif.gz_A structure of the nhej polymerase from methanocella paludicola 0.9115 7 294
ID Description Score Start End Superfamily
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9833 25 302 3.90.920.10
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9816 32 302 3.90.920.10
af_O69697_22_304_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9627 25 302 3.90.920.10
af_P9WNV3_16_301_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.935 24 293 3.90.920.10
af_P95226_24_305_3.90.920.10 Alpha Beta;Alpha-Beta Complex;DNA primase, PRIM domain;DNA primase, PRIM domain 0.9336 32 302 3.90.920.10
ID Description Score Start End GO Terms
AF-A0A6G2URU7-F1-model_v4 ATP-dependent DNA ligase 0.9892 8 256 GO:0016874
AF-A0A3D3KRH1-F1-model_v4 ATP-dependent DNA ligase 0.9874 167 295 GO:0016874
AF-A0A163LDL0-F1-model_v4 DNA ligase (ATP) 0.9872 24 334 GO:0003910
GO:0005524
GO:0006281
GO:0006310
AF-A0A536HYM9-F1-model_v4 DNA polymerase domain-containing protein 0.9866 5 291
AF-A0A536EP04-F1-model_v4 ATP-dependent DNA ligase 0.9857 189 336 GO:0016874

Map