F373376

General Info

Members Datasets Scaffolds Average Seq Length
265 171 253 305

Family's Representative Sequence

Representative Sequence 3300025934|Ga0207686_10049453|Ga0207686_100494532
Length 324
Sequence VDEGGEGLGRKGRMMRATTRLRSLIAHGPTLYVPGCYNALSARVLEAAGFEAIYMTGYGTSLSLTGLPDVGLTTMSEMVANARYIATSVRVPLIADADTGFGNAINVIRTLREYIGAGVAGLHMEDQVSPKRCGHVAGRQVIPLEEAVGKIRAAVDTRNELDPDFVIIARTDARGAAGGSLDEAIRRANAFLEAGADLAFIEGPTSVDEVRRICREVKPVFYNMTGVSPRFTLQELRELGIAVCISPNAMLRSALMAMHDLAAALKADGPEAETRFMESFAQHPLGDLHTFAGFDRIRAWEREYLGEDAMKKYADSVGHMPKNG

Samples

Sample ID Description Type Environment
1 2643221615 Nocardioides sp. Root224 Isolate Unclassified
2 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
3 2643221736 Bosea sp. Root483D1 Isolate Unclassified
4 2841760612 Bosea sp. Tri-49 Isolate Nodule
5 2844104063 Bosea sp. Tri-39 Isolate Nodule
6 2851182111 Bosea sp. Tri-44 Isolate Nodule
7 2851246043 Bosea sp. Tri-54 Isolate Nodule
8 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
9 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
10 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
11 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
36 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
41 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
44 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
51 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
52 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
53 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
54 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
69 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
70 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
71 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
72 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
96 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
102 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
103 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
104 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
108 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
109 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
110 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
111 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
112 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
113 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
114 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
115 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
121 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
124 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
127 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
128 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
131 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
134 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
142 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
143 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
144 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
150 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
151 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
152 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
153 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
154 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
155 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
156 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
160 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
161 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
162 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
163 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
166 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
170 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
171 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.47
Metatranscriptomes 0
Isolates 4.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.79
Nodule 1.89
Rhizoplane 0.38
Rhizosphere 87.55
Stem 0
Stem Tuber 0
Unclassified 3.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25159J45721_1005115 3300002987 Bacteria 4165
2 Ga0065165_1003133 3300005262 Bacteria 12214
3 Ga0070658_10005062 3300005327 Bacteria 10730
4 Ga0070658_10460575 3300005327 Bacteria 1096
5 Ga0070683_100393788 3300005329 Bacteria 1321
6 Ga0070689_100255256 3300005340 Bacteria 1448
7 Ga0070669_100021087 3300005353 Bacteria 4656
8 Ga0070667_100101855 3300005367 Bacteria 2481
9 Ga0070703_10043776 3300005406 Bacteria 1405
10 Ga0070711_100316945 3300005439 Bacteria 1245
11 Ga0070705_100205649 3300005440 Bacteria 1353
12 Ga0070694_100087715 3300005444 Bacteria 2177
13 Ga0070708_100120556 3300005445 Bacteria 2419
14 Ga0070681_10229456 3300005458 Bacteria 1771
15 Ga0070706_100084163 3300005467 Bacteria 2947
16 Ga0070707_100265706 3300005468 Bacteria 1669
17 Ga0070699_100027863 3300005518 Bacteria 4872
18 Ga0070697_100014644 3300005536 Bacteria 6157
19 Ga0070697_100020232 3300005536 Bacteria 5263
20 Ga0070686_100010754 3300005544 Bacteria 5173
21 Ga0070695_100059937 3300005545 Bacteria 2466
22 Ga0070695_100318959 3300005545 Bacteria 1154
23 Ga0070696_100033922 3300005546 Bacteria 3510
24 Ga0070665_100137159 3300005548 Bacteria 2449
25 Ga0070704_100007825 3300005549 Bacteria 6374
26 Ga0070704_100072742 3300005549 Bacteria 2502
27 Ga0070704_100188052 3300005549 Bacteria 1658
28 Ga0068852_100004363 3300005616 Bacteria 9991
29 Ga0068859_100116945 3300005617 Bacteria 2731
30 Ga0068859_100120321 3300005617 Bacteria 2692
31 Ga0068859_100160073 3300005617 Bacteria 2330
32 Ga0068866_10159164 3300005718 Bacteria 1315
33 Ga0068861_100180268 3300005719 Bacteria 1758
34 Ga0068851_10001312 3300005834 Bacteria 10827
35 Ga0068863_100236811 3300005841 Unclassified 1762
36 Ga0068862_100041478 3300005844 Bacteria 3916
37 Ga0081455_10006882 3300005937 Bacteria 12105
38 Ga0081538_10001415 3300005981 Bacteria 24648
39 Ga0081538_10007218 3300005981 Bacteria 9647
40 Ga0081538_10040017 3300005981 Bacteria 2996
41 Ga0070717_10490143 3300006028 Bacteria 1110
42 Ga0075364_10106910 3300006051 Bacteria 1864
43 Ga0070712_100023935 3300006175 Bacteria 4040
44 Ga0097621_100014678 3300006237 Bacteria 5870
45 Ga0068871_100090709 3300006358 Bacteria 2546
46 Ga0075428_100006328 3300006844 Bacteria 13170
47 Ga0075428_100026288 3300006844 Bacteria 6445
48 Ga0075430_100000301 3300006846 Bacteria 34954
49 Ga0075430_100000927 3300006846 Bacteria 23040
50 Ga0075431_100000175 3300006847 Bacteria 45515
51 Ga0075431_100000339 3300006847 Bacteria 36926
52 Ga0075431_100333760 3300006847 Bacteria 1527
53 Ga0075431_100415466 3300006847 Bacteria 1345
54 Ga0075431_100482696 3300006847 Bacteria 1232
55 Ga0075431_100507167 3300006847 Bacteria 1197
56 Ga0075433_10000065 3300006852 Bacteria 46718
57 Ga0075433_10150069 3300006852 Bacteria 2073
58 Ga0075434_100001212 3300006871 Bacteria 21423
59 Ga0075434_100065177 3300006871 Bacteria 3628
60 Ga0075434_100139031 3300006871 Bacteria 2448
61 Ga0075429_100000014 3300006880 Bacteria 79603
62 Ga0075429_100000807 3300006880 Bacteria 24634
63 Ga0075429_100106317 3300006880 Bacteria 2452
64 Ga0075436_100067787 3300006914 Bacteria 2466
65 Ga0097620_100116932 3300006931 Bacteria 2731
66 Ga0097620_100120323 3300006931 Bacteria 2692
67 Ga0097620_100160074 3300006931 Bacteria 2330
68 Ga0075435_100001556 3300007076 Bacteria 14805
69 Ga0075435_100019469 3300007076 Bacteria 5186
70 Ga0075435_100023522 3300007076 Bacteria 4767
71 Ga0075435_100061785 3300007076 Bacteria 3039
72 Ga0099794_10002654 3300007265 Bacteria 6655
73 Ga0111539_10008419 3300009094 Bacteria 13122
74 Ga0111539_10016351 3300009094 Bacteria 9199
75 Ga0111539_10111513 3300009094 Bacteria 3210
76 Ga0105245_10149543 3300009098 Bacteria 2207
77 Ga0114129_10001148 3300009147 Bacteria 35055
78 Ga0114129_10029401 3300009147 Bacteria 7784
79 Ga0114129_10058346 3300009147 Bacteria 5398
80 Ga0114129_10199389 3300009147 Bacteria 2712
81 Ga0114129_10246615 3300009147 Bacteria 2399
82 Ga0114129_10263977 3300009147 Bacteria 2306
83 Ga0114129_10358245 3300009147 Bacteria 1931
84 Ga0114129_10375246 3300009147 Bacteria 1879
85 Ga0105243_10021840 3300009148 Bacteria 4860
86 Ga0105242_10087917 3300009176 Bacteria 2609
87 Ga0105242_10292871 3300009176 Bacteria 1483
88 Ga0105248_10565549 3300009177 Bacteria 1283
89 Ga0105237_10000440 3300009545 Bacteria 59281
90 Ga0105249_10064269 3300009553 Bacteria 3373
91 Ga0105249_10150701 3300009553 Bacteria 2239
92 Ga0157374_10134528 3300013296 Bacteria 2395
93 Ga0157378_10376039 3300013297 Bacteria 1394
94 Ga0163162_10023602 3300013306 Bacteria 6073
95 Ga0157380_10117818 3300014326 Bacteria 2243
96 Ga0213876_10004678 3300021384 Bacteria 7625
97 Ga0209130_1000845 3300025284 Bacteria 25573
98 Ga0209025_1005044 3300025294 Bacteria 11014
99 Ga0209025_1031823 3300025294 Bacteria 2484
100 Ga0207426_1003743 3300025302 Bacteria 7939
101 Ga0207685_10138023 3300025905 Bacteria 1090
102 Ga0207705_10154752 3300025909 Bacteria 1720
103 Ga0207684_10004627 3300025910 Bacteria 12921
104 Ga0207671_10000010 3300025914 Bacteria 568302
105 Ga0207663_10126852 3300025916 Bacteria 1757
106 Ga0207657_10009696 3300025919 Bacteria 9658
107 Ga0207646_10045568 3300025922 Bacteria 3937
108 Ga0207646_10302730 3300025922 Bacteria 1444
109 Ga0207681_10044026 3300025923 Bacteria 2990
110 Ga0207706_10041913 3300025933 Bacteria 4057
111 Ga0207686_10049453 3300025934 Bacteria 2610
112 Ga0207686_10218501 3300025934 Bacteria 1375
113 Ga0207686_10310227 3300025934 Bacteria 1175
114 Ga0207709_10064081 3300025935 Bacteria 2306
115 Ga0207704_10348643 3300025938 Bacteria 1152
116 Ga0207689_10291809 3300025942 Bacteria 1351
117 Ga0207668_10004004 3300025972 Bacteria 8680
118 Ga0207658_10080151 3300025986 Bacteria 2500
119 Ga0207708_10330027 3300026075 Bacteria 1247
120 Ga0207641_10026004 3300026088 Bacteria 4829
121 Ga0207648_10010716 3300026089 Bacteria 8664
122 Ga0207674_10097536 3300026116 Bacteria 2923
123 Ga0207675_100262856 3300026118 Bacteria 1673
124 Ga0207675_100436224 3300026118 Bacteria 1296
125 Ga0207683_10401364 3300026121 Bacteria 1261
126 Ga0207698_10007571 3300026142 Bacteria 6807
127 Ga0209983_1013722 3300027665 Bacteria 1667
128 Ga0209588_1013885 3300027671 Bacteria 2461
129 Ga0207428_10001701 3300027907 Bacteria 22577
130 Ga0207428_10007386 3300027907 Bacteria 10020
131 Ga0207428_10007707 3300027907 Bacteria 9795
132 Ga0268266_10159022 3300028379 Bacteria 2043
133 Ga0268265_10031252 3300028380 Bacteria 3844
134 Ga0268264_10222680 3300028381 Bacteria 1738
135 Ga0265332_10034710 3300031238 Bacteria 2191
136 Ga0265331_10062393 3300031250 Bacteria 1758
137 Ga0307408_100041982 3300031548 Bacteria 3245
138 Ga0307408_100079511 3300031548 Bacteria 2447
139 Ga0307405_10181637 3300031731 Bacteria 1511
140 Ga0307409_100767168 3300031995 Bacteria 969
141 Ga0307416_100119853 3300032002 Bacteria 2342
142 Ga0307416_100173907 3300032002 Bacteria 2009
143 Ga0307416_100449267 3300032002 Bacteria 1341
144 Ga0307414_10236711 3300032004 Bacteria 1509
145 Ga0307411_10034390 3300032005 Bacteria 3154
146 Ga0307411_10050532 3300032005 Bacteria 2708
147 Ga0307415_100113379 3300032126 Bacteria 2016
148 Ga0373949_0000252 3300035090 Bacteria 20126
149 Ga0373960_0038279 3300035121 Bacteria 1374
150 Ga0373942_0010412 3300035207 Bacteria 2189
151 Ga0373931_0017980 3300035691 Bacteria 3507
152 Ga0373931_0024148 3300035691 Bacteria 3076
153 Ga0373933_0181964 3300035724 Bacteria 1341
154 Ga0395899_0012193 3300037312 Bacteria 6581
155 Ga0395899_0060236 3300037312 Bacteria 2797
156 Ga0395900_0007881 3300037418 Bacteria 10970
157 Ga0395900_0112828 3300037418 Bacteria 2791
158 Ga0395898_0062524 3300037466 Bacteria 3615
159 Ga0395905_0039231 3300037471 Bacteria 4443
160 Ga0395901_0258351 3300038443 Bacteria 1813
161 Ga0436365_0060900 3300039437 Bacteria 19443
162 Ga0451837_0904348 3300041494 Bacteria 3039
163 Ga0451577_0090067 3300042876 Bacteria 2738
164 Ga0466970_0155009 3300044765 Bacteria 1266
165 Ga0451576_0319975 3300045051 Bacteria 1623
166 Ga0451576_0409590 3300045051 Bacteria 1422
167 Ga0495580_0005365 3300046472 Bacteria 10613
168 Ga0495584_0064138 3300046491 Bacteria 1847
169 Ga0495594_0034623 3300046499 Bacteria 2748
170 Ga0495643_0123846 3300046522 Bacteria 1304
171 Ga0495642_0016002 3300046528 Bacteria 2921
172 Ga0495621_0050213 3300046539 Bacteria 1490
173 Ga0495669_0008680 3300046684 Bacteria 4277
174 Ga0496102_0016559 3300048905 Bacteria 6443
175 Ga0496122_0112740 3300048925 Bacteria 1780
176 Ga0501038_0052103 3300049574 Bacteria 3529
177 Ga0501038_0340421 3300049574 Bacteria 1170
178 Ga0501040_0134135 3300049576 Bacteria 1742
179 Ga0501042_0104515 3300049578 Bacteria 2038
180 Ga0501048_0095791 3300049582 Bacteria 2093
181 Ga0501067_0066157 3300049583 Bacteria 2001
182 Ga0501071_0037028 3300049587 Bacteria 3482
183 Ga0501072_0006791 3300049588 Bacteria 8689
184 Ga0501072_0111746 3300049588 Bacteria 2175
185 Ga0501072_0509978 3300049588 Bacteria 951
186 Ga0501075_0048957 3300049591 Bacteria 3176
187 Ga0501075_0178559 3300049591 Bacteria 1620
188 Ga0501076_0033579 3300049592 Bacteria 4006
189 Ga0501076_0106607 3300049592 Bacteria 2262
190 Ga0501077_0092829 3300049593 Bacteria 1913
191 Ga0501079_0135632 3300049741 Bacteria 1916
192 Ga0501079_0153921 3300049741 Bacteria 1792
193 Ga0501080_0011198 3300049742 Bacteria 8209
194 Ga0501081_0150389 3300049743 Bacteria 1672
195 Ga0501044_0307388 3300049823 Bacteria 1513
196 nmdc:mga00v17_35807_c1 3300050491 Bacteria 2956
197 nmdc:mga0k408_27575_c1 3300050493 Bacteria 3226
198 nmdc:mga0k408_57886_c1 3300050493 Bacteria 2251
199 nmdc:mga05p37_252438_c1 3300050507 Bacteria 1814
200 nmdc:mga05p37_27794_c1 3300050507 Bacteria 6891
201 nmdc:mga05p37_44627_c1 3300050507 Bacteria 5454
202 nmdc:mga05p37_6041_c1 3300050507 Bacteria 14253
203 nmdc:mga05p37_69867_c1 3300050507 Bacteria 4320
204 nmdc:mga05p37_83270_c1 3300050507 Bacteria 3941
205 nmdc:mga09592_131483_c1 3300050508 Bacteria 2154
206 nmdc:mga09592_222909_c1 3300050508 Bacteria 1633
207 nmdc:mga09592_286875_c1 3300050508 Bacteria 1427
208 nmdc:mga09592_30852_c1 3300050508 Bacteria 4463
209 nmdc:mga09592_80571_c1 3300050508 Bacteria 2772
210 nmdc:mga0qj67_2221_c1 3300050509 Bacteria 13795
211 nmdc:mga0qj67_28701_c1 3300050509 Bacteria 4322
212 nmdc:mga06r32_21819_c1 3300050510 Bacteria 5913
213 nmdc:mga06r32_293921_c1 3300050510 Bacteria 1611
214 nmdc:mga06r32_307185_c1 3300050510 Bacteria 1571
215 nmdc:mga06r32_385595_c1 3300050510 Bacteria 1384
216 nmdc:mga06r32_391645_c1 3300050510 Bacteria 1372
217 nmdc:mga06r32_414_c1 3300050510 Bacteria 35862
218 nmdc:mga08y16_1643_c1 3300050511 Bacteria 22656
219 nmdc:mga08y16_269109_c1 3300050511 Bacteria 1759
220 nmdc:mga08y16_3338_c1 3300050511 Bacteria 16625
221 nmdc:mga08y16_80030_c1 3300050511 Bacteria 3407
222 nmdc:mga0n895_14082_c1 3300050512 Bacteria 7251
223 nmdc:mga0n895_149066_c1 3300050512 Bacteria 2369
224 nmdc:mga0n895_34197_c1 3300050512 Bacteria 4891
225 nmdc:mga0n895_3667_c1 3300050512 Bacteria 12407
226 nmdc:mga0n895_540455_c1 3300050512 Bacteria 1172
227 nmdc:mga0n895_74061_c1 3300050512 Bacteria 3382
228 nmdc:mga0n895_76963_c1 3300050512 Bacteria 3318
229 nmdc:mga0rr50_291053_c1 3300050513 Bacteria 1365
230 nmdc:mga0rr50_3962_c1 3300050513 Bacteria 8615
231 nmdc:mga0rr50_4684_c1 3300050513 Bacteria 8061
232 nmdc:mga0rr50_66830_c1 3300050513 Bacteria 2729
233 nmdc:mga08x19_174257_c1 3300050514 Bacteria 1466
234 nmdc:mga08x19_62558_c1 3300050514 Bacteria 2413
235 nmdc:mga0a205_232092_c1 3300050515 Bacteria 1728
236 nmdc:mga0a205_23695_c1 3300050515 Bacteria 5823
237 nmdc:mga0a205_269_c1 3300050515 Bacteria 37657
238 nmdc:mga0a205_28512_c1 3300050515 Bacteria 5339
239 nmdc:mga0a205_76917_c1 3300050515 Bacteria 3225
240 Ga0500641_0029426 3300053096 Bacteria 2152
241 Ga0500594_0060130 3300053118 Bacteria 1093
242 Ga0500595_002671 3300053119 Bacteria 8669
243 Ga0500642_0006473 3300053130 Bacteria 3861
244 Ga0500616_0059995 3300053153 Bacteria 1974
245 Ga0500622_0060870 3300053156 Bacteria 1925
246 Ga0500636_0019779 3300053177 Bacteria 3982
247 Ga0500570_085262 3300053724 Unclassified 1402
248 Ga0501084_0032547 3300054114 Bacteria 4362
249 Ga0501084_0037823 3300054114 Bacteria 4033
250 Ga0501084_0314658 3300054114 Bacteria 1322
251 Ga0501082_0086006 3300060353 Bacteria 2712
252 Ga0501082_0096401 3300060353 Bacteria 2557
253 Ga0530510_0142393 3300061734 Bacteria 1767

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049588 Ga0501072_0509978 Ga0501072_0509978_232_936 227
2 3300049742 Ga0501080_0011198 Ga0501080_0011198_6437_7279 247
3 3300049583 Ga0501067_0066157 Ga0501067_0066157_1203_1973 248
4 3300046522 Ga0495643_0123846 Ga0495643_0123846_179_1015 258
5 3300048925 Ga0496122_0112740 Ga0496122_0112740_672_1508 258
6 3300053153 Ga0500616_0059995 Ga0500616_0059995_914_1762 258
7 3300053156 Ga0500622_0060870 Ga0500622_0060870_924_1760 258
8 3300053177 Ga0500636_0019779 Ga0500636_0019779_556_1392 258
9 3300031995 Ga0307409_100767168 Ga0307409_1007671681 263
10 3300032002 Ga0307416_100449267 Ga0307416_1004492672 263
11 3300032004 Ga0307414_10236711 Ga0307414_102367112 263
12 3300032126 Ga0307415_100113379 Ga0307415_1001133792 263
13 3300035090 Ga0373949_0000252 Ga0373949_0000252_12419_13282 264
14 3300005367 Ga0070667_100101855 Ga0070667_1001018551 269
15 3300025986 Ga0207658_10080151 Ga0207658_100801513 269
16 iso_pu_bacteria 2643221615 2644090015 271
17 iso_pu_bacteria 2643221657 2644319860 271
18 3300021384 Ga0213876_10004678 Ga0213876_100046785 272
19 3300039437 Ga0436365_0060900 Ga0436365_0060900_10367_11209 272
20 3300044765 Ga0466970_0155009 Ga0466970_0155009_101_952 272
21 3300041494 Ga0451837_0904348 Ga0451837_0904348_1036_1977 273
22 3300049823 Ga0501044_0307388 Ga0501044_0307388_28_894 274
23 3300053118 Ga0500594_0060130 Ga0500594_0060130_85_909 274
24 3300053119 Ga0500595_002671 Ga0500595_002671_2578_3402 274
25 3300053130 Ga0500642_0006473 Ga0500642_0006473_2057_2881 274
26 3300053724 Ga0500570_085262 Ga0500570_085262_393_1217 274
27 iso_pu_bacteria 2643221736 2644744427 274
28 iso_pu_bacteria 2841760612 2841761353 274
29 iso_pu_bacteria 2844104063 2844104378 274
30 iso_pu_bacteria 2851182111 2851184425 274
31 iso_pu_bacteria 2851246043 2851247366 274
32 iso_pu_bacteria 2881101125 2881101424 274
33 iso_pu_bacteria 8057529695 8057530465 274
34 3300005440 Ga0070705_100205649 Ga0070705_1002056491 276
35 3300005546 Ga0070696_100033922 Ga0070696_1000339223 276
36 3300005549 Ga0070704_100072742 Ga0070704_1000727421 276
37 3300005718 Ga0068866_10159164 Ga0068866_101591641 276
38 3300005937 Ga0081455_10006882 Ga0081455_1000688211 276
39 3300005981 Ga0081538_10001415 Ga0081538_1000141519 276
40 3300005981 Ga0081538_10007218 Ga0081538_1000721812 276
41 3300005981 Ga0081538_10040017 Ga0081538_100400171 276
42 3300006844 Ga0075428_100006328 Ga0075428_1000063285 276
43 3300006846 Ga0075430_100000301 Ga0075430_10000030134 276
44 3300006846 Ga0075430_100000927 Ga0075430_10000092710 276
45 3300006847 Ga0075431_100000175 Ga0075431_10000017519 276
46 3300006847 Ga0075431_100000339 Ga0075431_1000003398 276
47 3300006847 Ga0075431_100507167 Ga0075431_1005071671 276
48 3300006871 Ga0075434_100065177 Ga0075434_1000651772 276
49 3300006880 Ga0075429_100000014 Ga0075429_10000001419 276
50 3300007076 Ga0075435_100023522 Ga0075435_1000235223 276
51 3300009147 Ga0114129_10001148 Ga0114129_1000114810 276
52 3300009147 Ga0114129_10058346 Ga0114129_100583463 276
53 3300009147 Ga0114129_10263977 Ga0114129_102639774 276
54 3300009176 Ga0105242_10087917 Ga0105242_100879172 276
55 3300013297 Ga0157378_10376039 Ga0157378_103760392 276
56 3300025294 Ga0209025_1031823 Ga0209025_10318232 276
57 3300025934 Ga0207686_10049453 Ga0207686_100494532 276
58 3300026118 Ga0207675_100436224 Ga0207675_1004362242 276
59 3300031548 Ga0307408_100041982 Ga0307408_1000419822 276
60 3300032005 Ga0307411_10050532 Ga0307411_100505323 276
61 3300035121 Ga0373960_0038279 Ga0373960_0038279_63_995 276
62 3300035207 Ga0373942_0010412 Ga0373942_0010412_246_1178 276
63 3300037312 Ga0395899_0012193 Ga0395899_0012193_3674_4603 276
64 3300037418 Ga0395900_0007881 Ga0395900_0007881_1282_2211 276
65 3300037466 Ga0395898_0062524 Ga0395898_0062524_2349_3278 276
66 3300045051 Ga0451576_0409590 Ga0451576_0409590_347_1282 276
67 3300046539 Ga0495621_0050213 Ga0495621_0050213_455_1384 276
68 3300048905 Ga0496102_0016559 Ga0496102_0016559_405_1337 276
69 3300049574 Ga0501038_0052103 Ga0501038_0052103_1227_2159 276
70 3300049576 Ga0501040_0134135 Ga0501040_0134135_234_1166 276
71 3300049578 Ga0501042_0104515 Ga0501042_0104515_652_1584 276
72 3300049582 Ga0501048_0095791 Ga0501048_0095791_730_1662 276
73 3300049587 Ga0501071_0037028 Ga0501071_0037028_1433_2365 276
74 3300049588 Ga0501072_0006791 Ga0501072_0006791_3047_3979 276
75 3300049588 Ga0501072_0111746 Ga0501072_0111746_39_995 276
76 3300049591 Ga0501075_0048957 Ga0501075_0048957_188_1120 276
77 3300049592 Ga0501076_0033579 Ga0501076_0033579_1416_2348 276
78 3300049592 Ga0501076_0106607 Ga0501076_0106607_327_1283 276
79 3300049593 Ga0501077_0092829 Ga0501077_0092829_87_1019 276
80 3300049741 Ga0501079_0135632 Ga0501079_0135632_944_1876 276
81 3300049743 Ga0501081_0150389 Ga0501081_0150389_48_980 276
82 3300050507 nmdc:mga05p37_44627_c1 nmdc:mga05p37_44627_c1_2805_3734 276
83 3300050507 nmdc:mga05p37_6041_c1 nmdc:mga05p37_6041_c1_7661_8593 276
84 3300050507 nmdc:mga05p37_83270_c1 nmdc:mga05p37_83270_c1_2273_3202 276
85 3300050508 nmdc:mga09592_30852_c1 nmdc:mga09592_30852_c1_924_1853 276
86 3300050509 nmdc:mga0qj67_2221_c1 nmdc:mga0qj67_2221_c1_10421_11353 276
87 3300050509 nmdc:mga0qj67_28701_c1 nmdc:mga0qj67_28701_c1_904_1833 276
88 3300050510 nmdc:mga06r32_21819_c1 nmdc:mga06r32_21819_c1_4229_5161 276
89 3300050510 nmdc:mga06r32_293921_c1 nmdc:mga06r32_293921_c1_121_1053 276
90 3300050510 nmdc:mga06r32_414_c1 nmdc:mga06r32_414_c1_33917_34846 276
91 3300050511 nmdc:mga08y16_269109_c1 nmdc:mga08y16_269109_c1_578_1504 276
92 3300050512 nmdc:mga0n895_14082_c1 nmdc:mga0n895_14082_c1_1712_2647 276
93 3300050512 nmdc:mga0n895_34197_c1 nmdc:mga0n895_34197_c1_218_1153 276
94 3300050512 nmdc:mga0n895_540455_c1 nmdc:mga0n895_540455_c1_159_1094 276
95 3300050513 nmdc:mga0rr50_3962_c1 nmdc:mga0rr50_3962_c1_5712_6647 276
96 3300050515 nmdc:mga0a205_28512_c1 nmdc:mga0a205_28512_c1_2367_3302 276
97 3300054114 Ga0501084_0037823 Ga0501084_0037823_1394_2350 276
98 3300054114 Ga0501084_0314658 Ga0501084_0314658_262_1194 276
99 3300060353 Ga0501082_0086006 Ga0501082_0086006_468_1400 276
100 3300061734 Ga0530510_0142393 Ga0530510_0142393_486_1442 276
101 3300005327 Ga0070658_10005062 Ga0070658_1000506214 277
102 3300005329 Ga0070683_100393788 Ga0070683_1003937882 277
103 3300005340 Ga0070689_100255256 Ga0070689_1002552562 277
104 3300005406 Ga0070703_10043776 Ga0070703_100437762 277
105 3300005439 Ga0070711_100316945 Ga0070711_1003169452 277
106 3300005444 Ga0070694_100087715 Ga0070694_1000877152 277
107 3300005445 Ga0070708_100120556 Ga0070708_1001205561 277
108 3300005467 Ga0070706_100084163 Ga0070706_1000841633 277
109 3300005468 Ga0070707_100265706 Ga0070707_1002657061 277
110 3300005518 Ga0070699_100027863 Ga0070699_1000278635 277
111 3300005536 Ga0070697_100014644 Ga0070697_1000146445 277
112 3300005536 Ga0070697_100020232 Ga0070697_1000202327 277
113 3300005544 Ga0070686_100010754 Ga0070686_1000107544 277
114 3300005545 Ga0070695_100059937 Ga0070695_1000599372 277
115 3300005545 Ga0070695_100318959 Ga0070695_1003189591 277
116 3300005548 Ga0070665_100137159 Ga0070665_1001371592 277
117 3300005549 Ga0070704_100007825 Ga0070704_1000078253 277
118 3300005549 Ga0070704_100188052 Ga0070704_1001880522 277
119 3300005616 Ga0068852_100004363 Ga0068852_10000436312 277
120 3300005617 Ga0068859_100116945 Ga0068859_1001169454 277
121 3300005617 Ga0068859_100120321 Ga0068859_1001203214 277
122 3300005617 Ga0068859_100160073 Ga0068859_1001600731 277
123 3300005719 Ga0068861_100180268 Ga0068861_1001802682 277
124 3300005834 Ga0068851_10001312 Ga0068851_100013122 277
125 3300005841 Ga0068863_100236811 Ga0068863_1002368112 277
126 3300006028 Ga0070717_10490143 Ga0070717_104901431 277
127 3300006051 Ga0075364_10106910 Ga0075364_101069102 277
128 3300006175 Ga0070712_100023935 Ga0070712_1000239352 277
129 3300006237 Ga0097621_100014678 Ga0097621_1000146782 277
130 3300006358 Ga0068871_100090709 Ga0068871_1000907092 277
131 3300006844 Ga0075428_100026288 Ga0075428_1000262885 277
132 3300006847 Ga0075431_100333760 Ga0075431_1003337601 277
133 3300006847 Ga0075431_100415466 Ga0075431_1004154662 277
134 3300006847 Ga0075431_100482696 Ga0075431_1004826961 277
135 3300006852 Ga0075433_10000065 Ga0075433_100000655 277
136 3300006852 Ga0075433_10150069 Ga0075433_101500692 277
137 3300006871 Ga0075434_100001212 Ga0075434_10000121215 277
138 3300006871 Ga0075434_100139031 Ga0075434_1001390312 277
139 3300006880 Ga0075429_100000807 Ga0075429_10000080719 277
140 3300006880 Ga0075429_100106317 Ga0075429_1001063172 277
141 3300006914 Ga0075436_100067787 Ga0075436_1000677871 277
142 3300006931 Ga0097620_100116932 Ga0097620_1001169324 277
143 3300006931 Ga0097620_100120323 Ga0097620_1001203234 277
144 3300006931 Ga0097620_100160074 Ga0097620_1001600741 277
145 3300007076 Ga0075435_100001556 Ga0075435_1000015565 277
146 3300007076 Ga0075435_100019469 Ga0075435_1000194694 277
147 3300007076 Ga0075435_100061785 Ga0075435_1000617851 277
148 3300007265 Ga0099794_10002654 Ga0099794_100026546 277
149 3300009094 Ga0111539_10008419 Ga0111539_100084192 277
150 3300009094 Ga0111539_10016351 Ga0111539_1001635110 277
151 3300009094 Ga0111539_10111513 Ga0111539_101115132 277
152 3300009098 Ga0105245_10149543 Ga0105245_101495433 277
153 3300009147 Ga0114129_10029401 Ga0114129_100294013 277
154 3300009147 Ga0114129_10199389 Ga0114129_101993892 277
155 3300009147 Ga0114129_10246615 Ga0114129_102466153 277
156 3300009147 Ga0114129_10358245 Ga0114129_103582452 277
157 3300009147 Ga0114129_10375246 Ga0114129_103752462 277
158 3300009148 Ga0105243_10021840 Ga0105243_100218402 277
159 3300009176 Ga0105242_10292871 Ga0105242_102928712 277
160 3300009177 Ga0105248_10565549 Ga0105248_105655492 277
161 3300009545 Ga0105237_10000440 Ga0105237_1000044014 277
162 3300009553 Ga0105249_10064269 Ga0105249_100642693 277
163 3300009553 Ga0105249_10150701 Ga0105249_101507011 277
164 3300013296 Ga0157374_10134528 Ga0157374_101345282 277
165 3300013306 Ga0163162_10023602 Ga0163162_100236023 277
166 3300025905 Ga0207685_10138023 Ga0207685_101380232 277
167 3300025909 Ga0207705_10154752 Ga0207705_101547522 277
168 3300025910 Ga0207684_10004627 Ga0207684_100046277 277
169 3300025914 Ga0207671_10000010 Ga0207671_10000010450 277
170 3300025916 Ga0207663_10126852 Ga0207663_101268521 277
171 3300025919 Ga0207657_10009696 Ga0207657_100096965 277
172 3300025922 Ga0207646_10045568 Ga0207646_100455683 277
173 3300025922 Ga0207646_10302730 Ga0207646_103027301 277
174 3300025933 Ga0207706_10041913 Ga0207706_100419133 277
175 3300025934 Ga0207686_10218501 Ga0207686_102185012 277
176 3300025934 Ga0207686_10310227 Ga0207686_103102272 277
177 3300025935 Ga0207709_10064081 Ga0207709_100640813 277
178 3300025938 Ga0207704_10348643 Ga0207704_103486431 277
179 3300025942 Ga0207689_10291809 Ga0207689_102918091 277
180 3300026075 Ga0207708_10330027 Ga0207708_103300272 277
181 3300026088 Ga0207641_10026004 Ga0207641_100260046 277
182 3300026089 Ga0207648_10010716 Ga0207648_100107168 277
183 3300026116 Ga0207674_10097536 Ga0207674_100975361 277
184 3300026118 Ga0207675_100262856 Ga0207675_1002628562 277
185 3300026121 Ga0207683_10401364 Ga0207683_104013642 277
186 3300026142 Ga0207698_10007571 Ga0207698_100075713 277
187 3300027671 Ga0209588_1013885 Ga0209588_10138854 277
188 3300027907 Ga0207428_10001701 Ga0207428_1000170128 277
189 3300027907 Ga0207428_10007386 Ga0207428_100073864 277
190 3300027907 Ga0207428_10007707 Ga0207428_100077072 277
191 3300028379 Ga0268266_10159022 Ga0268266_101590222 277
192 3300028381 Ga0268264_10222680 Ga0268264_102226802 277
193 3300031238 Ga0265332_10034710 Ga0265332_100347102 277
194 3300031250 Ga0265331_10062393 Ga0265331_100623931 277
195 3300031548 Ga0307408_100079511 Ga0307408_1000795112 277
196 3300032002 Ga0307416_100119853 Ga0307416_1001198533 277
197 3300032002 Ga0307416_100173907 Ga0307416_1001739072 277
198 3300035691 Ga0373931_0017980 Ga0373931_0017980_2195_3142 277
199 3300035691 Ga0373931_0024148 Ga0373931_0024148_1001_1936 277
200 3300035724 Ga0373933_0181964 Ga0373933_0181964_326_1261 277
201 3300037312 Ga0395899_0060236 Ga0395899_0060236_770_1702 277
202 3300037418 Ga0395900_0112828 Ga0395900_0112828_1002_1934 277
203 3300037471 Ga0395905_0039231 Ga0395905_0039231_2084_3016 277
204 3300038443 Ga0395901_0258351 Ga0395901_0258351_270_1202 277
205 3300042876 Ga0451577_0090067 Ga0451577_0090067_88_1026 277
206 3300045051 Ga0451576_0319975 Ga0451576_0319975_291_1226 277
207 3300046472 Ga0495580_0005365 Ga0495580_0005365_9640_10587 277
208 3300046491 Ga0495584_0064138 Ga0495584_0064138_86_1021 277
209 3300046499 Ga0495594_0034623 Ga0495594_0034623_1582_2517 277
210 3300046528 Ga0495642_0016002 Ga0495642_0016002_359_1294 277
211 3300046684 Ga0495669_0008680 Ga0495669_0008680_3043_3978 277
212 3300049574 Ga0501038_0340421 Ga0501038_0340421_186_1121 277
213 3300049591 Ga0501075_0178559 Ga0501075_0178559_443_1378 277
214 3300049741 Ga0501079_0153921 Ga0501079_0153921_545_1480 277
215 3300050491 nmdc:mga00v17_35807_c1 nmdc:mga00v17_35807_c1_880_1812 277
216 3300050493 nmdc:mga0k408_27575_c1 nmdc:mga0k408_27575_c1_16_948 277
217 3300050493 nmdc:mga0k408_57886_c1 nmdc:mga0k408_57886_c1_505_1437 277
218 3300050507 nmdc:mga05p37_252438_c1 nmdc:mga05p37_252438_c1_780_1715 277
219 3300050507 nmdc:mga05p37_27794_c1 nmdc:mga05p37_27794_c1_5683_6618 277
220 3300050507 nmdc:mga05p37_69867_c1 nmdc:mga05p37_69867_c1_679_1614 277
221 3300050508 nmdc:mga09592_131483_c1 nmdc:mga09592_131483_c1_130_1065 277
222 3300050508 nmdc:mga09592_222909_c1 nmdc:mga09592_222909_c1_602_1537 277
223 3300050508 nmdc:mga09592_286875_c1 nmdc:mga09592_286875_c1_36_968 277
224 3300050508 nmdc:mga09592_80571_c1 nmdc:mga09592_80571_c1_1267_2202 277
225 3300050510 nmdc:mga06r32_307185_c1 nmdc:mga06r32_307185_c1_44_1003 277
226 3300050510 nmdc:mga06r32_385595_c1 nmdc:mga06r32_385595_c1_330_1265 277
227 3300050510 nmdc:mga06r32_391645_c1 nmdc:mga06r32_391645_c1_48_983 277
228 3300050511 nmdc:mga08y16_1643_c1 nmdc:mga08y16_1643_c1_1765_2700 277
229 3300050511 nmdc:mga08y16_3338_c1 nmdc:mga08y16_3338_c1_12304_13239 277
230 3300050511 nmdc:mga08y16_80030_c1 nmdc:mga08y16_80030_c1_1818_2750 277
231 3300050512 nmdc:mga0n895_149066_c1 nmdc:mga0n895_149066_c1_1313_2260 277
232 3300050512 nmdc:mga0n895_3667_c1 nmdc:mga0n895_3667_c1_8940_9875 277
233 3300050512 nmdc:mga0n895_74061_c1 nmdc:mga0n895_74061_c1_1520_2455 277
234 3300050512 nmdc:mga0n895_76963_c1 nmdc:mga0n895_76963_c1_2175_3110 277
235 3300050513 nmdc:mga0rr50_291053_c1 nmdc:mga0rr50_291053_c1_222_1157 277
236 3300050513 nmdc:mga0rr50_4684_c1 nmdc:mga0rr50_4684_c1_2483_3418 277
237 3300050513 nmdc:mga0rr50_66830_c1 nmdc:mga0rr50_66830_c1_1041_1976 277
238 3300050514 nmdc:mga08x19_174257_c1 nmdc:mga08x19_174257_c1_479_1414 277
239 3300050514 nmdc:mga08x19_62558_c1 nmdc:mga08x19_62558_c1_1410_2345 277
240 3300050515 nmdc:mga0a205_232092_c1 nmdc:mga0a205_232092_c1_146_1081 277
241 3300050515 nmdc:mga0a205_23695_c1 nmdc:mga0a205_23695_c1_2981_3916 277
242 3300050515 nmdc:mga0a205_269_c1 nmdc:mga0a205_269_c1_23864_24799 277
243 3300050515 nmdc:mga0a205_76917_c1 nmdc:mga0a205_76917_c1_429_1364 277
244 3300053096 Ga0500641_0029426 Ga0500641_0029426_1045_1977 277
245 3300054114 Ga0501084_0032547 Ga0501084_0032547_1875_2810 277
246 3300060353 Ga0501082_0096401 Ga0501082_0096401_798_1733 277
247 iso_pu_bacteria 2894772417 2894774937 277
248 iso_pu_bacteria 2929199973 2929200664 277
249 iso_pu_bacteria 8055909800 8055915350 277
250 3300002987 JGI25159J45721_1005115 JGI25159J45721_10051155 278
251 3300005262 Ga0065165_1003133 Ga0065165_10031332 278
252 3300005327 Ga0070658_10460575 Ga0070658_104605752 278
253 3300005353 Ga0070669_100021087 Ga0070669_1000210872 278
254 3300005458 Ga0070681_10229456 Ga0070681_102294562 278
255 3300005844 Ga0068862_100041478 Ga0068862_1000414783 278
256 3300014326 Ga0157380_10117818 Ga0157380_101178183 278
257 3300025284 Ga0209130_1000845 Ga0209130_10008452 278
258 3300025294 Ga0209025_1005044 Ga0209025_10050442 278
259 3300025302 Ga0207426_1003743 Ga0207426_10037437 278
260 3300025923 Ga0207681_10044026 Ga0207681_100440262 278
261 3300025972 Ga0207668_10004004 Ga0207668_100040048 278
262 3300027665 Ga0209983_1013722 Ga0209983_10137223 278
263 3300028380 Ga0268265_10031252 Ga0268265_100312523 278
264 3300031731 Ga0307405_10181637 Ga0307405_101816372 278
265 3300032005 Ga0307411_10034390 Ga0307411_100343903 278

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13714

PEP_mutase

Phosphoenolpyruvate phosphomutase

21

266

0.94

PF00463

ICL

Isocitrate lyase family

73

202

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xg3-assembly1.cif.gz_D crystal structure of the c123s 2-methylisocitrate lyase mutant from escherichia coli in complex with the reaction product, mg(ii)-pyruvate and succinate 0.9637 1 277
1xg3-assembly1.cif.gz_D crystal structure of the c123s 2-methylisocitrate lyase mutant from escherichia coli in complex with the reaction product, mg(ii)-pyruvate and succinate 0.957 1 277
6t5m-assembly1.cif.gz_B crystal structure of 2-methylisocitrate lyase (prpb) from pseudomonas aeruginosa in complex with mg(ii)-pyruvate. 0.948 1 277
1zlp-assembly1.cif.gz_B petal death protein psr132 with cysteine-linked glutaraldehyde forming a thiohemiacetal adduct 0.9469 1 277
1ujq-assembly1.cif.gz_D crystal structure of 2-methylisocitrate lyase (prpb) from salmonella enterica serovar typhimurium 0.9455 1 277
ID Description Score Start End Superfamily
af_Q0IPL3_20_290_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9768 25 277 3.20.20.60
af_O49290_35_333_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9468 2 277 3.20.20.60
af_O49290_35_333_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9369 2 277 3.20.20.60
1oqfA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9368 1 277 3.20.20.60
1oqfA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9303 1 277 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A543N845-F1-model_v4 deleted 0.9909 6 278
AF-B8INC5-F1-model_v4 Carboxyvinyl-carboxyphosphonate phosphorylmutase 0.9901 1 278 GO:0016833
AF-W4L1X9-F1-model_v4 Carboxyvinyl-carboxyphosphonate phosphorylmutase 0.9866 1 183 GO:0016833
AF-X7FDK3-F1-model_v4 Carboxyvinyl-carboxyphosphonate phosphorylmutase 0.9854 10 277 GO:0016833
AF-A0A259ULI8-F1-model_v4 deleted 0.9853 1 276

Feature Viewer

pLDDT pTM Quality
93.58 0.91 High
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Predicted Structure (AlphaFold2)

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