F372624

General Info

Members Datasets Scaffolds Average Seq Length
264 159 231 279

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10075624|Ga0157380_100756242
Length 302
Sequence VRPGHPPTDDGAELVDIRVREDGAMTRTVQGAKVLITGAAGGMGRMYAERAVAEHAASVTLWDRDAAALARAADELGAISRGRTAVRSYVVDVGDLGAIAKTAQRVRREVGNPDVLINNAGIVRGNRYFWETDNGEDTRPTMQVNALAPMYITREFIPGMIANAYRPSRIVNIASAAGTLANPRMAVYAASKAALIGWSDSLRLELEQADHGNVKVTTVTPSYISTGMFAGAKGPLLAPVLEPEIVVDRVWRAMLAGAPLVELPWSVGLSRALRGILPTRVFDRLVGDGFGVYRSMERFTWP

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
4 2643221549 Agromyces sp. Root1464 Isolate Unclassified
5 2643221572 Leifsonia sp. Root60 Isolate Unclassified
6 2643221577 Rhodanobacter sp. Root627 Isolate Unclassified
7 2643221616 Leifsonia sp. Root227 Isolate Unclassified
8 2643221619 Agromyces sp. Root81 Isolate Unclassified
9 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
10 2643221641 Nocardioides sp. Root122 Isolate Unclassified
11 2643221649 Leifsonia sp. Root4 Isolate Unclassified
12 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
13 2643221685 Rhodanobacter sp. Root480 Isolate Unclassified
14 2643221692 Nocardia sp. Root136 Isolate Unclassified
15 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
16 2808606372 Agromyces sp. 23-23 Isolate Unclassified
17 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
18 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
19 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
20 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
21 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
22 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
23 2928153084 Leifsonia sp. 563 Isolate Unclassified
24 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
25 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
26 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
27 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
28 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
29 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
30 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
31 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
32 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
33 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
34 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
35 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
36 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
37 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
38 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
39 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
40 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
41 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
42 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
43 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
44 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
45 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
46 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
47 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
50 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
51 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
54 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
55 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
56 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
67 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
76 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
77 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
89 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
92 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
93 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
94 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
95 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
98 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
99 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
100 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
101 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
102 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
103 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
104 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
105 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
106 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
107 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
110 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
111 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
114 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
115 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
120 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
121 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
122 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
123 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
124 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
145 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
150 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
151 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
152 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
153 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
154 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
155 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
156 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
157 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
158 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
159 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.98
Metatranscriptomes 1.52
Isolates 12.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.88
Nodule 0
Rhizoplane 3.41
Rhizosphere 74.24
Stem 0
Stem Tuber 0
Unclassified 9.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10018658 3300001979 Bacteria 2454
2 JGI24739J22299_10017125 3300001989 Bacteria 2617
3 JGI24737J22298_10019501 3300001990 Bacteria 2169
4 JGI24735J21928_10000525 3300002067 Bacteria 13544
5 JGI25165J46597_1011528 3300003214 Bacteria 1261
6 Ga0006562J51391_1021738 3300003578 Bacteria 2640
7 Ga0006562J51391_1021739 3300003578 Bacteria 4606
8 Ga0055539_1000069 3300003752 Bacteria 134064
9 Ga0055533_1000037 3300003756 Bacteria 255573
10 Ga0055525_1000252 3300003759 Bacteria 52775
11 Ga0055527_1000025 3300003760 Bacteria 195817
12 Ga0055542_1000048 3300003762 Bacteria 195800
13 Ga0055529_1000057 3300003763 Bacteria 195807
14 Ga0070658_10044234 3300005327 Bacteria 3598
15 Ga0070658_10053256 3300005327 Bacteria 3284
16 Ga0070682_100162666 3300005337 Bacteria 1543
17 Ga0070660_100362370 3300005339 Bacteria 1195
18 Ga0070668_100178416 3300005347 Bacteria 1734
19 Ga0070714_100116596 3300005435 Bacteria 2371
20 Ga0070714_100152576 3300005435 Bacteria 2083
21 Ga0070714_100202610 3300005435 Bacteria 1816
22 Ga0070681_10058545 3300005458 Bacteria 3832
23 Ga0070665_100404008 3300005548 Bacteria 1374
24 Ga0068855_100342716 3300005563 Bacteria 1647
25 Ga0068855_100409058 3300005563 Bacteria 1486
26 Ga0068856_100092000 3300005614 Bacteria 3017
27 Ga0068852_100221464 3300005616 Bacteria 1800
28 Ga0075363_100009534 3300006048 Bacteria 4566
29 Ga0075364_10004508 3300006051 Bacteria 8022
30 Ga0075369_10006881 3300006186 Bacteria 4317
31 Ga0075369_10037818 3300006186 Bacteria 2057
32 Ga0075370_10015890 3300006353 Bacteria 4041
33 Ga0075370_10139990 3300006353 Bacteria 1414
34 Ga0105240_10312611 3300009093 Bacteria 1793
35 Ga0111539_10906889 3300009094 Bacteria 1025
36 Ga0105243_10268279 3300009148 Bacteria 1531
37 Ga0105237_10141782 3300009545 Bacteria 2397
38 Ga0105246_10077557 3300011119 Bacteria 2357
39 Ga0157371_10018315 3300013102 Bacteria 5179
40 Ga0157370_10098058 3300013104 Bacteria 2749
41 Ga0157369_10000554 3300013105 Bacteria 49088
42 Ga0157369_10108116 3300013105 Bacteria 2958
43 Ga0157369_10664657 3300013105 Bacteria 1074
44 Ga0157375_10597950 3300013308 Bacteria 1262
45 Ga0157380_10075624 3300014326 Bacteria 2738
46 Ga0206354_11323596 3300020081 Bacteria 4784
47 Ga0206353_11516161 3300020082 Bacteria 20047
48 Ga0209566_100047 3300025225 Bacteria 243995
49 Ga0209674_100001 3300025226 Bacteria 4013750
50 Ga0209672_100011 3300025228 Bacteria 856297
51 Ga0209147_101375 3300025229 Bacteria 9034
52 Ga0209563_100001 3300025230 Bacteria 4013775
53 Ga0209563_104178 3300025230 Bacteria 2807
54 Ga0209258_104489 3300025242 Bacteria 2629
55 Ga0209677_100001 3300025253 Bacteria 4013787
56 Ga0209677_100731 3300025253 Bacteria 16734
57 Ga0209148_1000023 3300025254 Bacteria 680511
58 Ga0209129_1020101 3300025258 Bacteria 1248
59 Ga0209233_1005142 3300025261 Bacteria 4372
60 Ga0209455_1000023 3300025272 Bacteria 680449
61 Ga0209455_1001957 3300025272 Bacteria 8484
62 Ga0207688_10070355 3300025901 Bacteria 1984
63 Ga0207647_10051381 3300025904 Bacteria 2548
64 Ga0207647_10052087 3300025904 Bacteria 2527
65 Ga0207695_10323709 3300025913 Bacteria 1431
66 Ga0207657_10359622 3300025919 Bacteria 1148
67 Ga0207652_10200009 3300025921 Bacteria 1798
68 Ga0207664_10091754 3300025929 Bacteria 2492
69 Ga0207664_10203491 3300025929 Bacteria 1710
70 Ga0207709_10070459 3300025935 Bacteria 2217
71 Ga0207667_10259043 3300025949 Bacteria 1779
72 Ga0207678_10116481 3300026067 Bacteria 2280
73 Ga0207675_100009641 3300026118 Bacteria 9037
74 Ga0316576_10060344 3300031727 Bacteria 2778
75 Ga0307410_10146904 3300031852 Bacteria 1751
76 Ga0307416_100107331 3300032002 Bacteria 2450
77 Ga0307414_10005204 3300032004 Bacteria 7141
78 Ga0307415_100103019 3300032126 Bacteria 2099
79 Ga0307415_100205336 3300032126 Bacteria 1567
80 Ga0395899_0024544 3300037312 Bacteria 4557
81 Ga0395899_0232968 3300037312 Bacteria 1271
82 Ga0395900_0002808 3300037418 Bacteria 19018
83 Ga0395900_0003253 3300037418 Bacteria 17593
84 Ga0395900_0015356 3300037418 Bacteria 7806
85 Ga0395898_0000838 3300037466 Bacteria 50932
86 Ga0395901_0045353 3300038443 Bacteria 4562
87 Ga0466969_0012382 3300044656 Bacteria 4499
88 Ga0466972_0044285 3300044658 Bacteria 2159
89 Ga0466972_0107734 3300044658 Bacteria 1317
90 Ga0466972_0205381 3300044658 Bacteria 922
91 Ga0466965_0093773 3300044683 Bacteria 1529
92 Ga0466966_0009533 3300044684 Bacteria 6428
93 Ga0466966_0028586 3300044684 Bacteria 3630
94 Ga0466966_0155291 3300044684 Bacteria 1394
95 Ga0466961_0005859 3300044693 Bacteria 7785
96 Ga0466961_0006741 3300044693 Bacteria 7309
97 Ga0466961_0013111 3300044693 Bacteria 5302
98 Ga0466961_0030722 3300044693 Bacteria 3451
99 Ga0466961_0046351 3300044693 Bacteria 2781
100 Ga0466961_0051993 3300044693 Bacteria 2615
101 Ga0466961_0101839 3300044693 Bacteria 1809
102 Ga0466961_0136920 3300044693 Bacteria 1534
103 Ga0466963_0025120 3300044694 Bacteria 3797
104 Ga0466963_0052537 3300044694 Bacteria 2704
105 Ga0466963_0065767 3300044694 Bacteria 2431
106 Ga0466963_0071825 3300044694 Bacteria 2330
107 Ga0466963_0223263 3300044694 Bacteria 1320
108 Ga0466964_0043519 3300044706 Bacteria 1822
109 Ga0466971_0024423 3300044719 Bacteria 2697
110 Ga0466971_0112236 3300044719 Bacteria 1258
111 Ga0466968_0251636 3300044735 Bacteria 839
112 Ga0466970_0036510 3300044765 Bacteria 2603
113 Ga0466970_0036673 3300044765 Bacteria 2598
114 Ga0466970_0043487 3300044765 Bacteria 2390
115 Ga0466970_0091238 3300044765 Bacteria 1653
116 Ga0466970_0259581 3300044765 Bacteria 974
117 Ga0466957_0046478 3300044842 Bacteria 2635
118 Ga0466957_0049558 3300044842 Bacteria 2553
119 Ga0466957_0287817 3300044842 Bacteria 1101
120 Ga0466957_0319504 3300044842 Bacteria 1047
121 Ga0466960_0005775 3300044901 Bacteria 4925
122 Ga0466960_0019904 3300044901 Bacteria 2965
123 Ga0466960_0189705 3300044901 Bacteria 1118
124 Ga0466959_0004172 3300045049 Bacteria 9628
125 Ga0466959_0050074 3300045049 Bacteria 3068
126 Ga0466959_0317851 3300045049 Bacteria 1065
127 Ga0466958_0031065 3300045836 Bacteria 3174
128 Ga0466958_0039786 3300045836 Bacteria 2825
129 Ga0466958_0168001 3300045836 Bacteria 1388
130 Ga0466967_0002568 3300045976 Bacteria 11396
131 Ga0466967_0006906 3300045976 Bacteria 8111
132 Ga0466967_0107062 3300045976 Bacteria 2564
133 Ga0466967_0138602 3300045976 Bacteria 2264
134 Ga0466967_0282798 3300045976 Bacteria 1592
135 Ga0466967_0292401 3300045976 Bacteria 1565
136 Ga0466967_0314530 3300045976 Bacteria 1509
137 Ga0496100_0149379 3300048903 Bacteria 1664
138 Ga0496103_0052855 3300048906 Bacteria 2517
139 Ga0496104_0369560 3300048907 Bacteria 1347
140 Ga0496105_0095550 3300048908 Bacteria 2455
141 Ga0496105_0106345 3300048908 Bacteria 2316
142 Ga0496113_0079750 3300048916 Bacteria 2507
143 Ga0496113_0081537 3300048916 Bacteria 2480
144 Ga0496114_0076590 3300048917 Bacteria 2818
145 Ga0496115_0279189 3300048918 Bacteria 1371
146 Ga0496117_0075430 3300048920 Bacteria 2240
147 Ga0496118_0026912 3300048921 Bacteria 4883
148 Ga0496118_0070430 3300048921 Bacteria 2525
149 Ga0496119_0073382 3300048922 Bacteria 1996
150 Ga0496120_0169071 3300048923 Bacteria 1083
151 Ga0496126_0021575 3300048929 Bacteria 6288
152 Ga0496126_0087410 3300048929 Bacteria 2746
153 Ga0501031_0151391 3300049568 Bacteria 1516
154 Ga0501031_0177145 3300049568 Bacteria 1393
155 Ga0501032_0022635 3300049569 Bacteria 4354
156 Ga0501032_0031855 3300049569 Bacteria 3615
157 Ga0501032_0160699 3300049569 Bacteria 1475
158 Ga0501032_0241478 3300049569 Bacteria 1173
159 Ga0501033_0053577 3300049570 Bacteria 2987
160 Ga0501033_0081293 3300049570 Bacteria 2376
161 Ga0501033_0116982 3300049570 Bacteria 1936
162 Ga0501034_0014543 3300049571 Bacteria 8103
163 Ga0501034_0029149 3300049571 Bacteria 5611
164 Ga0501034_0264956 3300049571 Bacteria 1660
165 Ga0501036_0014708 3300049572 Bacteria 6524
166 Ga0501036_0114610 3300049572 Bacteria 2277
167 Ga0501036_0461851 3300049572 Bacteria 1057
168 Ga0501037_0001369 3300049573 Bacteria 17894
169 Ga0501037_0014604 3300049573 Bacteria 5778
170 Ga0501037_0180333 3300049573 Bacteria 1498
171 Ga0501038_0015477 3300049574 Bacteria 6933
172 Ga0501038_0079664 3300049574 Bacteria 2761
173 Ga0501039_0014340 3300049575 Bacteria 6068
174 Ga0501039_0042773 3300049575 Bacteria 3500
175 Ga0501039_0089093 3300049575 Bacteria 2404
176 Ga0501040_0253964 3300049576 Bacteria 1254
177 Ga0501041_0142023 3300049577 Bacteria 1497
178 Ga0501042_0030329 3300049578 Bacteria 3818
179 Ga0501042_0317943 3300049578 Bacteria 1125
180 Ga0501043_0020662 3300049579 Bacteria 5165
181 Ga0501043_0042142 3300049579 Bacteria 3586
182 Ga0501043_0088408 3300049579 Bacteria 2435
183 Ga0501043_0209277 3300049579 Bacteria 1512
184 Ga0501043_0293434 3300049579 Bacteria 1244
185 Ga0501046_0002305 3300049580 Bacteria 17994
186 Ga0501046_0026923 3300049580 Bacteria 4695
187 Ga0501046_0081848 3300049580 Bacteria 2493
188 Ga0501046_0083879 3300049580 Bacteria 2459
189 Ga0501046_0155619 3300049580 Bacteria 1722
190 Ga0501047_0000714 3300049581 Bacteria 34622
191 Ga0501047_0193012 3300049581 Bacteria 1899
192 Ga0501047_0246095 3300049581 Bacteria 1637
193 Ga0501048_0058066 3300049582 Bacteria 2743
194 Ga0501048_0286895 3300049582 Bacteria 1170
195 Ga0501070_0005145 3300049586 Bacteria 11144
196 Ga0501070_0036308 3300049586 Bacteria 4116
197 Ga0501070_0253792 3300049586 Bacteria 1438
198 Ga0501071_0146056 3300049587 Bacteria 1763
199 Ga0501072_0193091 3300049588 Bacteria 1624
200 Ga0501073_0081608 3300049589 Bacteria 2249
201 Ga0501073_0275781 3300049589 Bacteria 1160
202 Ga0501074_0351864 3300049590 Bacteria 1045
203 Ga0501076_0707393 3300049592 Bacteria 832
204 Ga0501079_0095499 3300049741 Bacteria 2304
205 Ga0501080_0024135 3300049742 Bacteria 5637
206 Ga0501080_0080884 3300049742 Bacteria 3019
207 Ga0501080_0257356 3300049742 Bacteria 1591
208 Ga0501035_0000853 3300049822 Bacteria 32534
209 Ga0501035_0017162 3300049822 Bacteria 6671
210 Ga0501035_0017759 3300049822 Bacteria 6562
211 Ga0501035_0106884 3300049822 Bacteria 2453
212 Ga0501035_0275706 3300049822 Bacteria 1422
213 Ga0501044_0001079 3300049823 Bacteria 32595
214 Ga0501044_0011728 3300049823 Bacteria 9493
215 Ga0501044_0032067 3300049823 Bacteria 5524
216 Ga0501044_0038982 3300049823 Bacteria 4959
217 Ga0501044_0070300 3300049823 Bacteria 3560
218 Ga0501044_0077204 3300049823 Bacteria 3378
219 Ga0501045_0014900 3300049824 Bacteria 5515
220 Ga0501045_0390300 3300049824 Bacteria 1036
221 nmdc:mga03n38_4879_c1 3300050490 Bacteria 4496
222 nmdc:mga00v17_14535_c1 3300050491 Bacteria 4397
223 nmdc:mga07m45_11600_c1 3300050496 Bacteria 4634
224 nmdc:mga07m45_204973_c1 3300050496 Bacteria 1147
225 nmdc:mga0sz30_60087_c1 3300050516 Bacteria 1623
226 nmdc:mga0sz30_7825_c1 3300050516 Bacteria 2936
227 Ga0500635_0000138 3300053080 Bacteria 41788
228 Ga0501082_0083715 3300060353 Bacteria 2752
229 Ga0466962_0010764 3300061719 Bacteria 4396
230 Ga0466962_0065612 3300061719 Bacteria 1733
231 Ga0466962_0071287 3300061719 Bacteria 1660

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300013105 Ga0157369_10000554 Ga0157369_1000055420 249
2 3300013102 Ga0157371_10018315 Ga0157371_100183153 251
3 3300025929 Ga0207664_10203491 Ga0207664_102034912 251
4 3300006048 Ga0075363_100009534 Ga0075363_1000095345 253
5 3300006051 Ga0075364_10004508 Ga0075364_100045084 253
6 3300006186 Ga0075369_10006881 Ga0075369_100068813 253
7 3300006353 Ga0075370_10015890 Ga0075370_100158905 253
8 3300050490 nmdc:mga03n38_4879_c1 nmdc:mga03n38_4879_c1_2078_2893 253
9 3300050491 nmdc:mga00v17_14535_c1 nmdc:mga00v17_14535_c1_1979_2794 253
10 3300050496 nmdc:mga07m45_11600_c1 nmdc:mga07m45_11600_c1_2508_3323 253
11 3300050516 nmdc:mga0sz30_7825_c1 nmdc:mga0sz30_7825_c1_806_1621 253
12 3300005435 Ga0070714_100202610 Ga0070714_1002026102 254
13 3300005563 Ga0068855_100342716 Ga0068855_1003427162 254
14 3300005614 Ga0068856_100092000 Ga0068856_1000920002 254
15 3300005616 Ga0068852_100221464 Ga0068852_1002214642 254
16 3300009093 Ga0105240_10312611 Ga0105240_103126111 254
17 3300009545 Ga0105237_10141782 Ga0105237_101417823 254
18 3300025904 Ga0207647_10052087 Ga0207647_100520872 254
19 3300025913 Ga0207695_10323709 Ga0207695_103237092 254
20 3300025949 Ga0207667_10259043 Ga0207667_102590432 254
21 3300044656 Ga0466969_0012382 Ga0466969_0012382_2843_3670 254
22 3300044658 Ga0466972_0044285 Ga0466972_0044285_379_1203 254
23 3300044658 Ga0466972_0107734 Ga0466972_0107734_31_858 254
24 3300044683 Ga0466965_0093773 Ga0466965_0093773_409_1233 254
25 3300044684 Ga0466966_0009533 Ga0466966_0009533_3889_4716 254
26 3300044684 Ga0466966_0028586 Ga0466966_0028586_1347_2183 254
27 3300044684 Ga0466966_0155291 Ga0466966_0155291_46_870 254
28 3300044693 Ga0466961_0005859 Ga0466961_0005859_4105_4929 254
29 3300044693 Ga0466961_0006741 Ga0466961_0006741_2211_3038 254
30 3300044693 Ga0466961_0013111 Ga0466961_0013111_4049_4876 254
31 3300044693 Ga0466961_0051993 Ga0466961_0051993_17_841 254
32 3300044693 Ga0466961_0136920 Ga0466961_0136920_64_891 254
33 3300044694 Ga0466963_0025120 Ga0466963_0025120_1447_2271 254
34 3300044694 Ga0466963_0052537 Ga0466963_0052537_143_967 254
35 3300044694 Ga0466963_0065767 Ga0466963_0065767_1219_2052 254
36 3300044694 Ga0466963_0071825 Ga0466963_0071825_724_1548 254
37 3300044694 Ga0466963_0223263 Ga0466963_0223263_479_1306 254
38 3300044706 Ga0466964_0043519 Ga0466964_0043519_573_1400 254
39 3300044719 Ga0466971_0024423 Ga0466971_0024423_570_1394 254
40 3300044719 Ga0466971_0112236 Ga0466971_0112236_245_1078 254
41 3300044765 Ga0466970_0036673 Ga0466970_0036673_1596_2420 254
42 3300044765 Ga0466970_0043487 Ga0466970_0043487_741_1568 254
43 3300044842 Ga0466957_0049558 Ga0466957_0049558_1587_2411 254
44 3300044842 Ga0466957_0287817 Ga0466957_0287817_145_972 254
45 3300044901 Ga0466960_0019904 Ga0466960_0019904_1613_2440 254
46 3300045049 Ga0466959_0050074 Ga0466959_0050074_408_1235 254
47 3300045049 Ga0466959_0317851 Ga0466959_0317851_225_1052 254
48 3300045836 Ga0466958_0031065 Ga0466958_0031065_806_1633 254
49 3300045836 Ga0466958_0039786 Ga0466958_0039786_511_1335 254
50 3300045836 Ga0466958_0168001 Ga0466958_0168001_415_1251 254
51 3300045976 Ga0466967_0002568 Ga0466967_0002568_9592_10416 254
52 3300045976 Ga0466967_0006906 Ga0466967_0006906_4637_5461 254
53 3300045976 Ga0466967_0107062 Ga0466967_0107062_1145_1969 254
54 3300045976 Ga0466967_0138602 Ga0466967_0138602_1401_2234 254
55 3300045976 Ga0466967_0292401 Ga0466967_0292401_505_1329 254
56 3300045976 Ga0466967_0314530 Ga0466967_0314530_227_1054 254
57 3300049576 Ga0501040_0253964 Ga0501040_0253964_64_900 254
58 3300049578 Ga0501042_0317943 Ga0501042_0317943_247_1092 254
59 3300049586 Ga0501070_0253792 Ga0501070_0253792_517_1344 254
60 3300049592 Ga0501076_0707393 Ga0501076_0707393_14_817 254
61 3300061719 Ga0466962_0010764 Ga0466962_0010764_2008_2841 254
62 3300061719 Ga0466962_0065612 Ga0466962_0065612_705_1529 254
63 3300061719 Ga0466962_0071287 Ga0466962_0071287_431_1255 254
64 3300003214 JGI25165J46597_1011528 JGI25165J46597_10115281 255
65 3300005435 Ga0070714_100116596 Ga0070714_1001165962 255
66 3300006353 Ga0075370_10139990 Ga0075370_101399901 255
67 3300025261 Ga0209233_1005142 Ga0209233_10051422 255
68 3300025929 Ga0207664_10091754 Ga0207664_100917543 255
69 3300031727 Ga0316576_10060344 Ga0316576_100603444 255
70 3300045976 Ga0466967_0282798 Ga0466967_0282798_331_1158 255
71 3300050496 nmdc:mga07m45_204973_c1 nmdc:mga07m45_204973_c1_283_1113 255
72 iso_pu_bacteria 2547132424 2548695527 255
73 iso_pu_bacteria 2551306166 2552108680 255
74 iso_pu_bacteria 2643221692 2644512271 255
75 iso_pu_bacteria 2808606372 2808900307 255
76 iso_pu_bacteria 2919713450 2919714369 255
77 3300005327 Ga0070658_10053256 Ga0070658_100532562 256
78 3300005339 Ga0070660_100362370 Ga0070660_1003623701 256
79 3300005458 Ga0070681_10058545 Ga0070681_100585453 256
80 3300005563 Ga0068855_100409058 Ga0068855_1004090582 256
81 3300006186 Ga0075369_10037818 Ga0075369_100378183 256
82 3300013104 Ga0157370_10098058 Ga0157370_100980582 256
83 3300025919 Ga0207657_10359622 Ga0207657_103596221 256
84 3300025921 Ga0207652_10200009 Ga0207652_102000092 256
85 3300032004 Ga0307414_10005204 Ga0307414_100052044 256
86 3300037418 Ga0395900_0003253 Ga0395900_0003253_13174_13998 256
87 3300049572 Ga0501036_0461851 Ga0501036_0461851_174_1010 256
88 3300049579 Ga0501043_0209277 Ga0501043_0209277_137_967 256
89 3300049580 Ga0501046_0083879 Ga0501046_0083879_1331_2167 256
90 3300049589 Ga0501073_0275781 Ga0501073_0275781_165_1001 256
91 3300049742 Ga0501080_0024135 Ga0501080_0024135_720_1556 256
92 3300049823 Ga0501044_0032067 Ga0501044_0032067_1567_2403 256
93 3300050516 nmdc:mga0sz30_60087_c1 nmdc:mga0sz30_60087_c1_248_1102 256
94 iso_pu_bacteria 2643221577 2643894800 256
95 iso_pu_bacteria 2643221685 2644476961 256
96 iso_pu_bacteria 2939660829 2939663032 256
97 iso_pu_bacteria 2956939328 2956939344 256
98 iso_pu_bacteria 2956939328 2956941117 256
99 iso_pu_bacteria 3001119090 3001120805 256
100 iso_pu_bacteria 3001119090 3001122136 256
101 iso_pu_bacteria 8004021418 8004022859 256
102 iso_pu_bacteria 8004025490 8004028900 256
103 3300005327 Ga0070658_10044234 Ga0070658_100442343 257
104 3300048929 Ga0496126_0087410 Ga0496126_0087410_1790_2596 257
105 iso_pu_bacteria 3001889506 3001891758 257
106 3300005347 Ga0070668_100178416 Ga0070668_1001784162 258
107 3300005548 Ga0070665_100404008 Ga0070665_1004040082 258
108 3300009094 Ga0111539_10906889 Ga0111539_109068891 258
109 3300009148 Ga0105243_10268279 Ga0105243_102682791 258
110 3300011119 Ga0105246_10077557 Ga0105246_100775573 258
111 3300014326 Ga0157380_10075624 Ga0157380_100756242 258
112 3300025901 Ga0207688_10070355 Ga0207688_100703551 258
113 3300025935 Ga0207709_10070459 Ga0207709_100704592 258
114 3300026067 Ga0207678_10116481 Ga0207678_101164813 258
115 3300026118 Ga0207675_100009641 Ga0207675_1000096418 258
116 3300032126 Ga0307415_100205336 Ga0307415_1002053362 258
117 3300048916 Ga0496113_0079750 Ga0496113_0079750_1495_2331 258
118 3300048929 Ga0496126_0021575 Ga0496126_0021575_4452_5285 258
119 3300049568 Ga0501031_0177145 Ga0501031_0177145_59_901 258
120 3300049577 Ga0501041_0142023 Ga0501041_0142023_617_1459 258
121 3300049588 Ga0501072_0193091 Ga0501072_0193091_423_1265 258
122 3300049741 Ga0501079_0095499 Ga0501079_0095499_509_1351 258
123 iso_pu_bacteria 2585428094 2587861713 258
124 iso_pu_bacteria 2643221572 2643876985 258
125 iso_pu_bacteria 2643221632 2644182035 258
126 iso_pu_bacteria 2643221649 2644278302 258
127 iso_pu_bacteria 2643221669 2644384040 258
128 iso_pu_bacteria 2895660088 2895662235 258
129 iso_pu_bacteria 2935409751 2935413467 258
130 3300013308 Ga0157375_10597950 Ga0157375_105979503 259
131 3300031852 Ga0307410_10146904 Ga0307410_101469043 259
132 3300032002 Ga0307416_100107331 Ga0307416_1001073313 259
133 3300032126 Ga0307415_100103019 Ga0307415_1001030193 259
134 3300037418 Ga0395900_0015356 Ga0395900_0015356_5430_6266 259
135 3300038443 Ga0395901_0045353 Ga0395901_0045353_2714_3550 259
136 3300049568 Ga0501031_0151391 Ga0501031_0151391_596_1432 259
137 3300049569 Ga0501032_0022635 Ga0501032_0022635_1493_2302 259
138 3300049569 Ga0501032_0031855 Ga0501032_0031855_2681_3517 259
139 3300049569 Ga0501032_0160699 Ga0501032_0160699_611_1447 259
140 3300049569 Ga0501032_0241478 Ga0501032_0241478_38_874 259
141 3300049570 Ga0501033_0053577 Ga0501033_0053577_1493_2302 259
142 3300049570 Ga0501033_0081293 Ga0501033_0081293_695_1531 259
143 3300049570 Ga0501033_0116982 Ga0501033_0116982_38_874 259
144 3300049571 Ga0501034_0014543 Ga0501034_0014543_4035_4844 259
145 3300049571 Ga0501034_0029149 Ga0501034_0029149_294_1130 259
146 3300049571 Ga0501034_0264956 Ga0501034_0264956_41_877 259
147 3300049572 Ga0501036_0014708 Ga0501036_0014708_935_1771 259
148 3300049572 Ga0501036_0114610 Ga0501036_0114610_500_1345 259
149 3300049573 Ga0501037_0001369 Ga0501037_0001369_3059_3895 259
150 3300049573 Ga0501037_0014604 Ga0501037_0014604_2030_2839 259
151 3300049573 Ga0501037_0180333 Ga0501037_0180333_497_1333 259
152 3300049574 Ga0501038_0015477 Ga0501038_0015477_2731_3540 259
153 3300049574 Ga0501038_0079664 Ga0501038_0079664_420_1256 259
154 3300049575 Ga0501039_0014340 Ga0501039_0014340_3794_4603 259
155 3300049575 Ga0501039_0042773 Ga0501039_0042773_1164_2009 259
156 3300049575 Ga0501039_0089093 Ga0501039_0089093_598_1434 259
157 3300049578 Ga0501042_0030329 Ga0501042_0030329_1221_2057 259
158 3300049579 Ga0501043_0020662 Ga0501043_0020662_4240_5076 259
159 3300049579 Ga0501043_0042142 Ga0501043_0042142_184_1020 259
160 3300049579 Ga0501043_0088408 Ga0501043_0088408_950_1786 259
161 3300049579 Ga0501043_0293434 Ga0501043_0293434_368_1204 259
162 3300049580 Ga0501046_0002305 Ga0501046_0002305_91_927 259
163 3300049580 Ga0501046_0026923 Ga0501046_0026923_1212_2021 259
164 3300049580 Ga0501046_0081848 Ga0501046_0081848_1534_2370 259
165 3300049580 Ga0501046_0155619 Ga0501046_0155619_483_1319 259
166 3300049581 Ga0501047_0000714 Ga0501047_0000714_29742_30578 259
167 3300049581 Ga0501047_0193012 Ga0501047_0193012_898_1734 259
168 3300049581 Ga0501047_0246095 Ga0501047_0246095_403_1239 259
169 3300049582 Ga0501048_0058066 Ga0501048_0058066_1787_2623 259
170 3300049582 Ga0501048_0286895 Ga0501048_0286895_56_892 259
171 3300049586 Ga0501070_0036308 Ga0501070_0036308_115_951 259
172 3300049587 Ga0501071_0146056 Ga0501071_0146056_297_1142 259
173 3300049589 Ga0501073_0081608 Ga0501073_0081608_1080_1916 259
174 3300049590 Ga0501074_0351864 Ga0501074_0351864_124_960 259
175 3300049742 Ga0501080_0080884 Ga0501080_0080884_1293_2129 259
176 3300049742 Ga0501080_0257356 Ga0501080_0257356_747_1556 259
177 3300049822 Ga0501035_0000853 Ga0501035_0000853_105_941 259
178 3300049822 Ga0501035_0017162 Ga0501035_0017162_837_1673 259
179 3300049822 Ga0501035_0017759 Ga0501035_0017759_3077_3913 259
180 3300049822 Ga0501035_0275706 Ga0501035_0275706_276_1112 259
181 3300049823 Ga0501044_0001079 Ga0501044_0001079_2060_2896 259
182 3300049823 Ga0501044_0011728 Ga0501044_0011728_2776_3612 259
183 3300049823 Ga0501044_0038982 Ga0501044_0038982_1633_2442 259
184 3300049823 Ga0501044_0070300 Ga0501044_0070300_1169_2005 259
185 3300049823 Ga0501044_0077204 Ga0501044_0077204_552_1388 259
186 3300049824 Ga0501045_0014900 Ga0501045_0014900_2705_3514 259
187 3300049824 Ga0501045_0390300 Ga0501045_0390300_88_924 259
188 3300060353 Ga0501082_0083715 Ga0501082_0083715_682_1491 259
189 iso_pu_bacteria 2643221549 2643769221 259
190 iso_pu_bacteria 2643221619 2644112675 259
191 iso_pu_bacteria 2643221641 2644230742 259
192 iso_pu_bacteria 2721755702 2723643811 259
193 iso_pu_bacteria 2919443155 2919444896 259
194 iso_pu_bacteria 8046352972 8046354390 259
195 3300003760 Ga0055527_1000025 Ga0055527_10000253 265
196 3300003762 Ga0055542_1000048 Ga0055542_10000483 265
197 3300003763 Ga0055529_1000057 Ga0055529_1000057178 265
198 3300025228 Ga0209672_100011 Ga0209672_100011661 265
199 3300025229 Ga0209147_101375 Ga0209147_1013753 265
200 3300025242 Ga0209258_104489 Ga0209258_1044892 265
201 3300025254 Ga0209148_1000023 Ga0209148_1000023499 265
202 3300025272 Ga0209455_1000023 Ga0209455_1000023499 265
203 3300005337 Ga0070682_100162666 Ga0070682_1001626662 266
204 3300013105 Ga0157369_10664657 Ga0157369_106646572 266
205 3300025904 Ga0207647_10051381 Ga0207647_100513812 266
206 3300048903 Ga0496100_0149379 Ga0496100_0149379_532_1374 266
207 3300048906 Ga0496103_0052855 Ga0496103_0052855_488_1330 266
208 3300048908 Ga0496105_0106345 Ga0496105_0106345_689_1531 266
209 3300048917 Ga0496114_0076590 Ga0496114_0076590_131_973 266
210 3300048918 Ga0496115_0279189 Ga0496115_0279189_21_863 266
211 3300048921 Ga0496118_0070430 Ga0496118_0070430_310_1152 266
212 3300048922 Ga0496119_0073382 Ga0496119_0073382_265_1107 266
213 3300048923 Ga0496120_0169071 Ga0496120_0169071_141_983 267
214 3300044735 Ga0466968_0251636 Ga0466968_0251636_10_828 271
215 3300048920 Ga0496117_0075430 Ga0496117_0075430_274_1116 279
216 3300048921 Ga0496118_0026912 Ga0496118_0026912_205_1047 279
217 3300001979 JGI24740J21852_10018658 JGI24740J21852_100186582 280
218 3300001989 JGI24739J22299_10017125 JGI24739J22299_100171252 280
219 3300001990 JGI24737J22298_10019501 JGI24737J22298_100195011 280
220 3300002067 JGI24735J21928_10000525 JGI24735J21928_100005253 280
221 3300003578 Ga0006562J51391_1021738 Ga0006562J51391_10217381 280
222 3300003578 Ga0006562J51391_1021739 Ga0006562J51391_10217392 280
223 3300003752 Ga0055539_1000069 Ga0055539_100006984 280
224 3300003756 Ga0055533_1000037 Ga0055533_100003785 280
225 3300003759 Ga0055525_1000252 Ga0055525_100025246 280
226 3300005435 Ga0070714_100152576 Ga0070714_1001525761 280
227 3300013105 Ga0157369_10108116 Ga0157369_101081163 280
228 3300020081 Ga0206354_11323596 Ga0206354_113235961 280
229 3300020082 Ga0206353_11516161 Ga0206353_1151616121 280
230 3300025225 Ga0209566_100047 Ga0209566_10004741 280
231 3300025226 Ga0209674_100001 Ga0209674_1000012234 280
232 3300025230 Ga0209563_100001 Ga0209563_1000012234 280
233 3300025230 Ga0209563_104178 Ga0209563_1041782 280
234 3300025253 Ga0209677_100001 Ga0209677_1000012234 280
235 3300025253 Ga0209677_100731 Ga0209677_1007318 280
236 3300025258 Ga0209129_1020101 Ga0209129_10201011 280
237 3300025272 Ga0209455_1001957 Ga0209455_10019575 280
238 3300037312 Ga0395899_0024544 Ga0395899_0024544_2446_3354 280
239 3300037312 Ga0395899_0232968 Ga0395899_0232968_167_1063 280
240 3300037418 Ga0395900_0002808 Ga0395900_0002808_10490_11398 280
241 3300037466 Ga0395898_0000838 Ga0395898_0000838_28767_29675 280
242 3300044658 Ga0466972_0205381 Ga0466972_0205381_55_900 280
243 3300044693 Ga0466961_0030722 Ga0466961_0030722_858_1757 280
244 3300044693 Ga0466961_0046351 Ga0466961_0046351_1719_2615 280
245 3300044693 Ga0466961_0101839 Ga0466961_0101839_758_1657 280
246 3300044765 Ga0466970_0036510 Ga0466970_0036510_1416_2315 280
247 3300044765 Ga0466970_0091238 Ga0466970_0091238_571_1512 280
248 3300044765 Ga0466970_0259581 Ga0466970_0259581_107_952 280
249 3300044842 Ga0466957_0046478 Ga0466957_0046478_1681_2580 280
250 3300044842 Ga0466957_0319504 Ga0466957_0319504_26_871 280
251 3300044901 Ga0466960_0005775 Ga0466960_0005775_55_954 280
252 3300044901 Ga0466960_0189705 Ga0466960_0189705_165_1064 280
253 3300045049 Ga0466959_0004172 Ga0466959_0004172_2402_3301 280
254 3300048907 Ga0496104_0369560 Ga0496104_0369560_190_1089 280
255 3300048908 Ga0496105_0095550 Ga0496105_0095550_740_1636 280
256 3300048916 Ga0496113_0081537 Ga0496113_0081537_1497_2393 280
257 3300049586 Ga0501070_0005145 Ga0501070_0005145_4811_5707 280
258 3300049822 Ga0501035_0106884 Ga0501035_0106884_1119_2015 280
259 3300053080 Ga0500635_0000138 Ga0500635_0000138_10356_11228 280
260 iso_pu_bacteria 2643221616 2644097787 280
261 iso_pu_bacteria 2844841374 2844843780 280
262 iso_pu_bacteria 2919055335 2919055765 280
263 iso_pu_bacteria 2919523602 2919525854 280
264 iso_pu_bacteria 2928153084 2928153909 280

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

32

234

0.92

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

38

254

0.88

PF08659

KR

KR domain

32

209

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g89-assembly1.cif.gz_A hsd17b13 in complex with cofactor and inhibitor 0.9442 2 262
8g93-assembly1.cif.gz_A crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9313 2 252
8g93-assembly1.cif.gz_B crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9305 2 255
7e28-assembly1.cif.gz_A crystal structure of sdr family nad(p)-dependent oxidoreductase from exiguobacterium 0.923 2 199
8g9v-assembly2.cif.gz_C crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.9132 7 254
ID Description Score Start End Superfamily
af_Q9VIG6_88_328_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9553 2 257 3.40.50.720
af_Q8N3Y7_32_292_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9502 2 263 3.40.50.720
af_Q9VR28_44_308_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9471 2 267 3.40.50.720
af_O18030_30_301_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9373 2 270 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9318 99 203 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1I7MMY0-F1-model_v4 Short-chain dehydrogenase 0.9822 2 280 GO:0016616
AF-A0A2D8V733-F1-model_v4 Short-chain dehydrogenase 0.9744 148 280 GO:0016616
AF-A0A212EV09-F1-model_v4 Short-chain dehydrogenase 0.9697 2 280 GO:0005811
GO:0016616
AF-K1Z7T9-F1-model_v4 Short-chain dehydrogenase/reductase SDR 0.9598 2 280 GO:0016616
AF-A0A3S3P268-F1-model_v4 Epidermal retinol dehydrogenase 2-like protein 0.9585 2 274 GO:0005811
GO:0016020
GO:0016616

Feature Viewer

pLDDT pTM Quality
87.06 0.86 High
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Predicted Structure (AlphaFold2)

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