F372081

General Info

Members Datasets Scaffolds Average Seq Length
263 198 526 415

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0009360|Ga0495651_0009360_4261_5610
Length 449
Sequence MPVAEKSAAQAAGTAAREPAGAQPEYERFEPDPAQRPLPPMPADFAALRRQDPELAGVLLAELERQSTGLQLLAGENFASPAVLAALGSPLANKYAEGYPGHRHHAGCEMVDLAERLAVERATALFGAEHANVQPYSGSSAVLAAYAALLVPGDTVLATSLAHGGHLTHGSRANFSGRWFEFAGYGVGHDGLIDYDQVRDLARRHRPKAIVCGAIAYPRHLDYAAFREIADDVGAYLIADAAHTLGLVAGGAAPNPVPYADVVCATTHKTLRGPRGGLILCGRELAGRVDRAVYPFSQGGPHLHAIAAKAAAFAEAATPAFAAYAHRVVDNARLLVEDLTAEGLRVVTGGTDTHLITADVSGLGLTGHAARGRCAAAGIMLDKCPLPYDPRPADGCSGIRLGTAAITTQGLGEREMPQVAGLIGRALREERGIASSVAELVGRFPPYPV

Samples

Sample ID Description Type Environment
1 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
7 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
8 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
9 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
10 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
11 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
12 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
13 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
14 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
15 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
16 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
17 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
18 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
19 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
20 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
21 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
22 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
23 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
24 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
25 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
26 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
27 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
28 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
29 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
30 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
31 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
32 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
33 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
34 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
35 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
36 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
37 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
38 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
39 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
40 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
41 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
42 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
43 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
44 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
45 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
46 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
47 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
48 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
49 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
50 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
51 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
52 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
55 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
56 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
59 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
60 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
61 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
62 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
63 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
64 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
65 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
68 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
69 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
70 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
75 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
76 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
77 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
78 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
79 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
80 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
81 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
82 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
83 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
84 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
85 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
88 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
89 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
90 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
91 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
92 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
93 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
96 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
97 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
116 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
117 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
118 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
119 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
120 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
121 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
122 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
123 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
124 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
125 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
126 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
127 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
128 2643221548 Streptomyces sp. Root55 Isolate Unclassified
129 2643221578 Streptomyces sp. Root63 Isolate Unclassified
130 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
131 2643221647 Streptomyces sp. Root369 Isolate Unclassified
132 2643221670 Streptomyces sp. Root431 Isolate Unclassified
133 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
134 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
135 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
136 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
137 2643221714 Streptomyces sp. Root264 Isolate Unclassified
138 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
139 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
140 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
141 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
142 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
143 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
144 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
145 2808606448 Streptomyces sp. 193411 Isolate Unclassified
146 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
147 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
148 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
149 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
150 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
151 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
152 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
153 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
154 2862574272 Streptomyces sp. AcE210 Isolate Nodule
155 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
156 2867428634 Streptomyces sp. RP5T Isolate Unclassified
157 2867475112 Streptomyces sp. TM32 Isolate Unclassified
158 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
159 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
160 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
161 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
162 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
163 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
164 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
165 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
166 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
167 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
168 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
169 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
170 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
171 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
172 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
173 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
174 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
175 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
176 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
177 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
178 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
179 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
180 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
181 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
182 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
183 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
184 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
185 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
186 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
187 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
188 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
189 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
190 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
191 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
192 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
193 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
194 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
195 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
196 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
197 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
198 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.48
Metatranscriptomes 0.76
Isolates 27.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.18
Nodule 1.14
Rhizoplane 0.76
Rhizosphere 74.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495651_0009360 3300046462 Bacteria 7520
2 rootH1_10028364 3300003316 Bacteria 5547
3 Ga0006562J51391_1065530 3300003578 Bacteria 2510
4 Ga0006562J51391_1065531 3300003578 Bacteria 3990
5 Ga0081455_10009187 3300005937 Bacteria 10189
6 Ga0075363_100003775 3300006048 Bacteria 6526
7 Ga0111539_10177834 3300009094 Bacteria 2486
8 Ga0105243_10136908 3300009148 Bacteria 2084
9 Ga0105246_10004665 3300011119 Bacteria 8341
10 Ga0183367_1002 3300015688 Bacteria 1101531
11 Ga0213875_10007413 3300021388 Bacteria 5667
12 Ga0207426_1003290 3300025302 Bacteria 8998
13 Ga0307517_10017905 3300028786 Bacteria 9197
14 Ga0268256_1008377 3300030500 Bacteria 3547
15 Ga0307511_10054333 3300030521 Bacteria 3159
16 Ga0307513_10082297 3300031456 Bacteria 3314
17 Ga0307509_10020652 3300031507 Bacteria 7469
18 Ga0307509_10090106 3300031507 Bacteria 3143
19 Ga0307509_10125152 3300031507 Bacteria 2538
20 Ga0307508_10003293 3300031616 Bacteria 16460
21 Ga0307508_10012560 3300031616 Bacteria 7746
22 Ga0307508_10057979 3300031616 Bacteria 3426
23 Ga0307514_10008300 3300031649 Bacteria 8863
24 Ga0307516_10005886 3300031730 Bacteria 14510
25 Ga0307516_10017480 3300031730 Bacteria 7476
26 Ga0307518_10105514 3300031838 Bacteria 2013
27 Ga0307410_10054020 3300031852 Bacteria 2721
28 Ga0307406_10038533 3300031901 Bacteria 2959
29 Ga0307415_100045347 3300032126 Bacteria 2947
30 Ga0307507_10028312 3300033179 Bacteria 5975
31 Ga0307510_10133347 3300033180 Bacteria 2149
32 Ga0307510_10141214 3300033180 Bacteria 2051
33 Ga0395898_0003850 3300037466 Bacteria 16607
34 Ga0395898_0008215 3300037466 Bacteria 11037
35 Ga0436364_0473068 3300037853 Bacteria 15750
36 Ga0395901_0012207 3300038443 Bacteria 8719
37 Ga0439436_0000487 3300041404 Bacteria 10315
38 Ga0439439_0002220 3300041406 Bacteria 4088
39 Ga0451853_0150950 3300041512 Bacteria 10492
40 Ga0439433_0014858 3300041999 Bacteria 1716
41 Ga0439448_0000693 3300042005 Bacteria 8050
42 Ga0439449_0001943 3300042007 Bacteria 8126
43 Ga0439449_0009393 3300042007 Bacteria 3707
44 Ga0439457_000419 3300042014 Bacteria 12192
45 Ga0439457_000894 3300042014 Bacteria 9002
46 Ga0450898_000959 3300042134 Bacteria 3627
47 Ga0450899_000327 3300042135 Bacteria 5222
48 Ga0450903_000144 3300042138 Bacteria 15642
49 Ga0439458_0005510 3300042157 Bacteria 2845
50 Ga0450908_001391 3300042184 Bacteria 4693
51 Ga0466969_0003988 3300044656 Bacteria 7833
52 Ga0466969_0023839 3300044656 Bacteria 3150
53 Ga0466969_0052474 3300044656 Bacteria 2003
54 Ga0466972_0004214 3300044658 Bacteria 7185
55 Ga0466965_0009157 3300044683 Bacteria 4598
56 Ga0466966_0005431 3300044684 Bacteria 8378
57 Ga0466966_0005731 3300044684 Bacteria 8174
58 Ga0466966_0056873 3300044684 Bacteria 2473
59 Ga0466961_0000308 3300044693 Bacteria 32406
60 Ga0466961_0000436 3300044693 Bacteria 26623
61 Ga0466961_0033134 3300044693 Bacteria 3320
62 Ga0466963_0001216 3300044694 Bacteria 13564
63 Ga0466964_0002020 3300044706 Bacteria 7134
64 Ga0466971_0001300 3300044719 Bacteria 10431
65 Ga0466971_0002002 3300044719 Bacteria 8632
66 Ga0466970_0003902 3300044765 Bacteria 7305
67 Ga0466957_0000605 3300044842 Bacteria 18193
68 Ga0466959_0000486 3300045049 Bacteria 23165
69 Ga0466958_0000413 3300045836 Bacteria 17607
70 Ga0466967_0003786 3300045976 Bacteria 9991
71 Ga0495592_0006433 3300046454 Bacteria 8746
72 Ga0495603_0021254 3300046455 Bacteria 3929
73 Ga0495590_0022573 3300046457 Bacteria 2226
74 Ga0495629_0009563 3300046459 Bacteria 7084
75 Ga0495629_0015350 3300046459 Bacteria 5501
76 Ga0495629_0047219 3300046459 Bacteria 3020
77 Ga0495629_0090432 3300046459 Bacteria 2135
78 Ga0495638_0016183 3300046460 Bacteria 4999
79 Ga0495638_0033786 3300046460 Bacteria 3269
80 Ga0495651_0021463 3300046462 Bacteria 5019
81 Ga0495651_0031653 3300046462 Bacteria 4125
82 Ga0495582_0087110 3300046473 Bacteria 1738
83 Ga0495639_0018433 3300046475 Bacteria 3039
84 Ga0495662_0006830 3300046476 Bacteria 5678
85 Ga0495585_0035357 3300046492 Bacteria 2824
86 Ga0495594_0009354 3300046499 Bacteria 5061
87 Ga0495594_0014120 3300046499 Bacteria 4183
88 Ga0495607_0024751 3300046501 Bacteria 3739
89 Ga0495618_0020641 3300046514 Bacteria 4056
90 Ga0495618_0092375 3300046514 Bacteria 1935
91 Ga0495628_0027925 3300046516 Bacteria 4588
92 Ga0495630_0035964 3300046517 Bacteria 3702
93 Ga0495632_0060320 3300046519 Bacteria 1843
94 Ga0495643_0030389 3300046522 Bacteria 3016
95 Ga0495640_0018882 3300046533 Bacteria 5100
96 Ga0495645_0039874 3300046543 Bacteria 3425
97 Ga0495622_0050801 3300046557 Bacteria 1923
98 Ga0495634_0002467 3300046642 Bacteria 15369
99 Ga0495634_0002771 3300046642 Bacteria 14392
100 Ga0495625_0160721 3300046660 Bacteria 1505
101 Ga0495635_0001012 3300046663 Bacteria 18564
102 Ga0495588_0003317 3300046674 Bacteria 6986
103 Ga0495657_0002470 3300046675 Bacteria 15558
104 Ga0495657_0008144 3300046675 Bacteria 8034
105 Ga0495657_0088652 3300046675 Bacteria 1988
106 Ga0495658_0049705 3300046683 Bacteria 2369
107 Ga0495613_0002156 3300046689 Bacteria 14923
108 Ga0495613_0010802 3300046689 Bacteria 6773
109 Ga0495613_0069833 3300046689 Bacteria 2561
110 Ga0495624_0044252 3300046690 Bacteria 2838
111 Ga0495624_0157935 3300046690 Bacteria 1386
112 Ga0495670_0006126 3300046691 Bacteria 5902
113 Ga0495589_0032713 3300046794 Bacteria 2614
114 Ga0495589_0034390 3300046794 Bacteria 2545
115 Ga0495589_0066671 3300046794 Bacteria 1762
116 Ga0495600_0017426 3300046809 Bacteria 4569
117 Ga0495660_0019680 3300046810 Bacteria 3874
118 Ga0495581_0039947 3300047315 Bacteria 2716
119 Ga0495604_0000623 3300047317 Bacteria 30451
120 Ga0495604_0013450 3300047317 Bacteria 6520
121 Ga0495636_0005288 3300047318 Bacteria 5070
122 Ga0495636_0007694 3300047318 Bacteria 4237
123 Ga0495676_0000806 3300047321 Bacteria 26177
124 Ga0495676_0016010 3300047321 Bacteria 6659
125 Ga0495676_0053708 3300047321 Bacteria 3208
126 Ga0495687_004471 3300047443 Bacteria 9419
127 Ga0495687_025287 3300047443 Bacteria 2810
128 Ga0495675_0003140 3300047444 Bacteria 9915
129 Ga0495685_008955 3300047447 Bacteria 3336
130 Ga0495685_009543 3300047447 Bacteria 3245
131 Ga0495685_018406 3300047447 Bacteria 2397
132 Ga0495681_0006185 3300047470 Bacteria 7903
133 Ga0495686_0023015 3300047472 Bacteria 4116
134 Ga0495602_0017544 3300048088 Bacteria 7173
135 Ga0495614_0012835 3300048089 Bacteria 3676
136 Ga0496109_0056043 3300048912 Bacteria 3596
137 Ga0501031_0038350 3300049568 Bacteria 3127
138 Ga0501032_0012305 3300049569 Bacteria 6119
139 Ga0501032_0040720 3300049569 Bacteria 3157
140 Ga0501033_0007320 3300049570 Bacteria 8603
141 Ga0501034_0005286 3300049571 Bacteria 14162
142 Ga0501034_0013378 3300049571 Bacteria 8447
143 Ga0501034_0038173 3300049571 Bacteria 4864
144 Ga0501034_0071846 3300049571 Bacteria 3469
145 Ga0501034_0097262 3300049571 Bacteria 2939
146 Ga0501036_0010812 3300049572 Bacteria 7542
147 Ga0501036_0026882 3300049572 Bacteria 4862
148 Ga0501036_0119211 3300049572 Bacteria 2228
149 Ga0501037_0010921 3300049573 Bacteria 6674
150 Ga0501037_0042501 3300049573 Bacteria 3339
151 Ga0501038_0005927 3300049574 Bacteria 11298
152 Ga0501038_0076206 3300049574 Bacteria 2833
153 Ga0501038_0126250 3300049574 Bacteria 2105
154 Ga0501039_0011658 3300049575 Bacteria 6694
155 Ga0501039_0023008 3300049575 Bacteria 4779
156 Ga0501042_0169349 3300049578 Bacteria 1576
157 Ga0501043_0006250 3300049579 Bacteria 9562
158 Ga0501043_0016631 3300049579 Bacteria 5766
159 Ga0501043_0068073 3300049579 Bacteria 2795
160 Ga0501046_0040424 3300049580 Bacteria 3726
161 Ga0501047_0097791 3300049581 Bacteria 2813
162 Ga0501047_0115005 3300049581 Bacteria 2572
163 Ga0501047_0382330 3300049581 Bacteria 1242
164 Ga0501048_0040842 3300049582 Bacteria 3322
165 Ga0501069_0054991 3300049585 Bacteria 2217
166 Ga0501070_0000119 3300049586 Bacteria 70355
167 Ga0501070_0009395 3300049586 Bacteria 8267
168 Ga0501070_0148188 3300049586 Bacteria 1937
169 Ga0501074_0001283 3300049590 Bacteria 16635
170 Ga0501035_0008845 3300049822 Bacteria 9369
171 Ga0501035_0011307 3300049822 Bacteria 8272
172 Ga0501035_0037202 3300049822 Bacteria 4408
173 Ga0501035_0037873 3300049822 Bacteria 4365
174 Ga0501035_0087450 3300049822 Bacteria 2746
175 Ga0501044_0008387 3300049823 Bacteria 11334
176 Ga0501044_0044230 3300049823 Bacteria 4622
177 Ga0501044_0075268 3300049823 Bacteria 3427
178 Ga0501044_0241981 3300049823 Bacteria 1748
179 nmdc:mga07m45_22239_c1 3300050496 Bacteria 3460
180 Ga0495612_0060021 3300053078 Bacteria 1574
181 Ga0500566_0037341 3300053094 Bacteria 2815
182 Ga0500654_038246 3300053099 Bacteria 2766
183 Ga0500569_001649 3300053109 Bacteria 4252
184 Ga0500572_007237 3300053111 Bacteria 2567
185 Ga0500652_006498 3300053131 Bacteria 3767
186 Ga0500658_0007138 3300053134 Bacteria 4130
187 Ga0500561_0001101 3300053137 Bacteria 4360
188 Ga0500624_001424 3300053157 Bacteria 3902
189 Ga0466962_0000418 3300061719 Bacteria 18353
190 Ga0466962_0000646 3300061719 Bacteria 15546
191 2585309034 2582581313 Bacteria 10042643
192 2585319224 2582581314 Bacteria 11452267
193 2643764001 2643221548 Bacteria 8053412
194 2643902281 2643221578 Bacteria 9213798
195 2643943889 2643221587 Bacteria 7586415
196 2644265827 2643221647 Bacteria 10741251
197 2644386876 2643221670 Bacteria 6497041
198 2644403851 2643221673 Bacteria 9196637
199 2644434626 2643221677 Bacteria 7584031
200 2644440033 2643221678 Bacteria 9540101
201 2644461566 2643221682 Bacteria 6743283
202 2644632642 2643221714 Bacteria 9015452
203 2753075746 2751185734 Bacteria 8863695
204 2784590391 2784132148 Bacteria 8627943
205 2785341224 2784746763 Bacteria 9783172
206 2785371480 2784746768 Bacteria 10036182
207 2786672639 2786546132 Bacteria 10419719
208 2808844011 2808606359 Bacteria 9866990
209 2808913602 2808606375 Bacteria 9466072
210 2809234065 2808606448 Bacteria 8656184
211 2811844431 2808606982 Bacteria 7791042
212 2812355965 2811994879 Bacteria 9313447
213 2812478774 2811994917 Bacteria 7761064
214 2852641002 2852635781 Bacteria 8251373
215 2862186391 2862178590 Bacteria 8583590
216 2862284769 2862281513 Bacteria 9621493
217 2862388105 2862382967 Bacteria 10317375
218 2862512698 2862507626 Bacteria 9425308
219 2862577529 2862574272 Bacteria 10567477
220 2863408590 2863404153 Bacteria 9672205
221 2867430549 2867428634 Bacteria 9590268
222 2867481129 2867475112 Bacteria 6909112
223 2870724096 2870721527 Bacteria 9689237
224 2873154075 2873151551 Bacteria 8625867
225 2877679123 2877676314 Bacteria 9512378
226 2912717635 2912715099 Bacteria 9460473
227 2912730188 2912723979 Bacteria 8557534
228 2918506485 2918501144 Bacteria 8668083
229 2919471716 2919468124 Bacteria 9133025
230 2935395055 2935390628 Bacteria 7043367
231 2946047880 2946045630 Bacteria 8527308
232 2946069822 2946064051 Bacteria 8957905
233 2946077743 2946072368 Bacteria 8999607
234 2947226978 2947224130 Bacteria 9938529
235 2954384027 2954380949 Bacteria 10050426
236 2954678931 2954673503 Bacteria 9685905
237 2954685220 2954682443 Bacteria 9862841
238 2954694826 2954691527 Bacteria 10720516
239 2954710028 2954701450 Bacteria 10834262
240 2954714338 2954711539 Bacteria 10867210
241 2954724287 2954721474 Bacteria 10456478
242 2954737552 2954731030 Bacteria 10243860
243 2954743184 2954740390 Bacteria 10229294
244 2954756386 2954749733 Bacteria 10366972
245 2954762142 2954759201 Bacteria 9358192
246 2990062922 2990059506 Bacteria 9321252
247 2997452844 2997451912 Bacteria 8492419
248 3006491298 3006486233 Bacteria 8157040
249 3006500100 3006493962 Bacteria 8825450
250 8008562765 8008558824 Bacteria 10610750
251 8008577188 8008574985 Bacteria 7815457
252 8023627170 8023623736 Bacteria 8593882
253 8025483922 8025478263 Bacteria 8209203
254 8047896124 8047893842 Bacteria 11723082
255 8048132286 8048127548 Bacteria 11053136
256 8048362810 8048356638 Bacteria 11044339
257 8048373150 8048369669 Bacteria 11666822
258 8048382083 8048379754 Bacteria 11877923
259 8048411946 8048406513 Bacteria 8936924
260 8054163326 8054160619 Bacteria 7783213
261 8056453188 8056447290 Bacteria 7680491
262 8056668091 8056667051 Bacteria 6953971
263 8056832179 8056829672 Bacteria 9045328
264 Ga0495651_0009360
265 rootH1_10028364
266 Ga0006562J51391_1065530
267 Ga0006562J51391_1065531
268 Ga0081455_10009187
269 Ga0075363_100003775
270 Ga0111539_10177834
271 Ga0105243_10136908
272 Ga0105246_10004665
273 Ga0183367_1002
274 Ga0213875_10007413
275 Ga0207426_1003290
276 Ga0307517_10017905
277 Ga0268256_1008377
278 Ga0307511_10054333
279 Ga0307513_10082297
280 Ga0307509_10020652
281 Ga0307509_10090106
282 Ga0307509_10125152
283 Ga0307508_10003293
284 Ga0307508_10012560
285 Ga0307508_10057979
286 Ga0307514_10008300
287 Ga0307516_10005886
288 Ga0307516_10017480
289 Ga0307518_10105514
290 Ga0307410_10054020
291 Ga0307406_10038533
292 Ga0307415_100045347
293 Ga0307507_10028312
294 Ga0307510_10133347
295 Ga0307510_10141214
296 Ga0395898_0003850
297 Ga0395898_0008215
298 Ga0436364_0473068
299 Ga0395901_0012207
300 Ga0439436_0000487
301 Ga0439439_0002220
302 Ga0451853_0150950
303 Ga0439433_0014858
304 Ga0439448_0000693
305 Ga0439449_0001943
306 Ga0439449_0009393
307 Ga0439457_000419
308 Ga0439457_000894
309 Ga0450898_000959
310 Ga0450899_000327
311 Ga0450903_000144
312 Ga0439458_0005510
313 Ga0450908_001391
314 Ga0466969_0003988
315 Ga0466969_0023839
316 Ga0466969_0052474
317 Ga0466972_0004214
318 Ga0466965_0009157
319 Ga0466966_0005431
320 Ga0466966_0005731
321 Ga0466966_0056873
322 Ga0466961_0000308
323 Ga0466961_0000436
324 Ga0466961_0033134
325 Ga0466963_0001216
326 Ga0466964_0002020
327 Ga0466971_0001300
328 Ga0466971_0002002
329 Ga0466970_0003902
330 Ga0466957_0000605
331 Ga0466959_0000486
332 Ga0466958_0000413
333 Ga0466967_0003786
334 Ga0495592_0006433
335 Ga0495603_0021254
336 Ga0495590_0022573
337 Ga0495629_0009563
338 Ga0495629_0015350
339 Ga0495629_0047219
340 Ga0495629_0090432
341 Ga0495638_0016183
342 Ga0495638_0033786
343 Ga0495651_0021463
344 Ga0495651_0031653
345 Ga0495582_0087110
346 Ga0495639_0018433
347 Ga0495662_0006830
348 Ga0495585_0035357
349 Ga0495594_0009354
350 Ga0495594_0014120
351 Ga0495607_0024751
352 Ga0495618_0020641
353 Ga0495618_0092375
354 Ga0495628_0027925
355 Ga0495630_0035964
356 Ga0495632_0060320
357 Ga0495643_0030389
358 Ga0495640_0018882
359 Ga0495645_0039874
360 Ga0495622_0050801
361 Ga0495634_0002467
362 Ga0495634_0002771
363 Ga0495625_0160721
364 Ga0495635_0001012
365 Ga0495588_0003317
366 Ga0495657_0002470
367 Ga0495657_0008144
368 Ga0495657_0088652
369 Ga0495658_0049705
370 Ga0495613_0002156
371 Ga0495613_0010802
372 Ga0495613_0069833
373 Ga0495624_0044252
374 Ga0495624_0157935
375 Ga0495670_0006126
376 Ga0495589_0032713
377 Ga0495589_0034390
378 Ga0495589_0066671
379 Ga0495600_0017426
380 Ga0495660_0019680
381 Ga0495581_0039947
382 Ga0495604_0000623
383 Ga0495604_0013450
384 Ga0495636_0005288
385 Ga0495636_0007694
386 Ga0495676_0000806
387 Ga0495676_0016010
388 Ga0495676_0053708
389 Ga0495687_004471
390 Ga0495687_025287
391 Ga0495675_0003140
392 Ga0495685_008955
393 Ga0495685_009543
394 Ga0495685_018406
395 Ga0495681_0006185
396 Ga0495686_0023015
397 Ga0495602_0017544
398 Ga0495614_0012835
399 Ga0496109_0056043
400 Ga0501031_0038350
401 Ga0501032_0012305
402 Ga0501032_0040720
403 Ga0501033_0007320
404 Ga0501034_0005286
405 Ga0501034_0013378
406 Ga0501034_0038173
407 Ga0501034_0071846
408 Ga0501034_0097262
409 Ga0501036_0010812
410 Ga0501036_0026882
411 Ga0501036_0119211
412 Ga0501037_0010921
413 Ga0501037_0042501
414 Ga0501038_0005927
415 Ga0501038_0076206
416 Ga0501038_0126250
417 Ga0501039_0011658
418 Ga0501039_0023008
419 Ga0501042_0169349
420 Ga0501043_0006250
421 Ga0501043_0016631
422 Ga0501043_0068073
423 Ga0501046_0040424
424 Ga0501047_0097791
425 Ga0501047_0115005
426 Ga0501047_0382330
427 Ga0501048_0040842
428 Ga0501069_0054991
429 Ga0501070_0000119
430 Ga0501070_0009395
431 Ga0501070_0148188
432 Ga0501074_0001283
433 Ga0501035_0008845
434 Ga0501035_0011307
435 Ga0501035_0037202
436 Ga0501035_0037873
437 Ga0501035_0087450
438 Ga0501044_0008387
439 Ga0501044_0044230
440 Ga0501044_0075268
441 Ga0501044_0241981
442 nmdc:mga07m45_22239_c1
443 Ga0495612_0060021
444 Ga0500566_0037341
445 Ga0500654_038246
446 Ga0500569_001649
447 Ga0500572_007237
448 Ga0500652_006498
449 Ga0500658_0007138
450 Ga0500561_0001101
451 Ga0500624_001424
452 Ga0466962_0000418
453 Ga0466962_0000646
454 2585309034
455 2585319224
456 2643764001
457 2643902281
458 2643943889
459 2644265827
460 2644386876
461 2644403851
462 2644434626
463 2644440033
464 2644461566
465 2644632642
466 2753075746
467 2784590391
468 2785341224
469 2785371480
470 2786672639
471 2808844011
472 2808913602
473 2809234065
474 2811844431
475 2812355965
476 2812478774
477 2852641002
478 2862186391
479 2862284769
480 2862388105
481 2862512698
482 2862577529
483 2863408590
484 2867430549
485 2867481129
486 2870724096
487 2873154075
488 2877679123
489 2912717635
490 2912730188
491 2918506485
492 2919471716
493 2935395055
494 2946047880
495 2946069822
496 2946077743
497 2947226978
498 2954384027
499 2954678931
500 2954685220
501 2954694826
502 2954710028
503 2954714338
504 2954724287
505 2954737552
506 2954743184
507 2954756386
508 2954762142
509 2990062922
510 2997452844
511 3006491298
512 3006500100
513 8008562765
514 8008577188
515 8023627170
516 8025483922
517 8047896124
518 8048132286
519 8048362810
520 8048373150
521 8048382083
522 8048411946
523 8054163326
524 8056453188
525 8056668091
526 8056832179

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00464

SHMT

Serine hydroxymethyltransferase

48

423

0.98

PF00155

Aminotran_1_2

Aminotransferase class I and II

110

357

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1yjy-assembly1.cif.gz_A k226m mutant of serine hydroxymethyltransferase from b. stearothermophilus, complex with serine 0.9481 13 405
6yrw-assembly2.cif.gz_B shmt from streptococcus thermophilus tyr55ser variant as internal aldimine and as non-covalent complex with d-ser 0.9435 14 411
1kkj-assembly1.cif.gz_A crystal structure of serine hydroxymethyltransferase from b.stearothermophilus 0.9432 12 405
8sui-assembly1.cif.gz_B joint x-ray/neutron structure of thermus thermophilus serine hydroxymethyltransferase (tthshmt) in internal aldimine state with l-ser bound in a pre-michalis complex 0.9387 16 405
2vmo-assembly1.cif.gz_A crystal structure of n341absshmt gly external aldimine 0.9372 13 405
ID Description Score Start End Superfamily
2dkjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9659 42 292 3.40.640.10
2dkjA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9584 42 292 3.40.640.10
5vc2B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.938 46 282 3.40.640.10
af_Q6NYR0_52_322_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9372 42 287 3.40.640.10
af_Q8I566_36_298_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9363 42 291 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A4Q0AJ14-F1-model_v4 deleted 0.9789 110 209
AF-A0A6G2D7F4-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.9779 117 226 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653
AF-A0A6I1J104-F1-model_v4 deleted 0.9769 113 247
AF-G9IYN4-F1-model_v4 Glycine hydroxymethyltransferase 0.974 71 235 GO:0004372
GO:0005829
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653
AF-A0A378VW09-F1-model_v4 Serine hydroxymethyltransferase (EC 2.1.2.1) 0.9722 83 249 GO:0004372
GO:0005829
GO:0006730
GO:0008168
GO:0019264
GO:0030170
GO:0032259
GO:0046653

Map