F372010

General Info

Members Datasets Scaffolds Average Seq Length
263 189 230 871

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0006339|Ga0373925_0006339_3421_6567
Length 1034
Sequence VRLIEVRRLSGPNVYLRRPVTVARLELDELTGHETTSHAGFAGRLTGLLPGLADHHCAAGRPGGFLDAMARGTYFGHVTEHVALELSGLAGRPAYFGRTEWAGADGRYDVVMECPQDEPLDSPVPRDLLMLAIGVVTGVLAERDPRPDAALMAITRAVEEGRLGVSTAALAEAARRRGIPARRAGGLSLLRLGYGCHRRLVWAALTEQTSAVGVDIASDKQLAKQLLADAGVPVPAGALARSAAEAAEAFTRIGGPAVVKPRRGNHGASVSVGITSADEAAEAYRRAATIGPEVIVEAYIPGRDYRVLVVDGRLVAAAQLRPASVTGDGSRDIAALVARANTDPRRGDGHARPLTRIVLDSETLGRLAAQGLSPQSVPGPGQVIHLRGNANLSTGGTSTDVTDLVHPEVATMCCRAAAAAGLDVCGLDVRLTDISAPLHGDADSGRDAGGALPGAVIELNACPGLRMHLAPSAGRPRDVAGPIIDRLYPPGVPARIPIVSVTGTNGKTTTVRMISQILRQAGLRVGMTTTDGVHLGGQLVRATDASGPRSAEMVLGDPTVEAAVLETARGGIIRRGLGYDQADVAVLTNITADHLGMDVAEEIRRGGTVVLNADDPRTAAIAGRPAVRRRQPVIRYFGLDGRNPVMVAHRMAGGITCELRGTDLVEARGGEETLLLSVADIPGSFGGAASYLVANALAAVSACRALGVSVKDIQRALATFTPVQANPGRGNIYQVAGCPVIVDYGHNAAALAAMGRLLREAWDGEPVAAVTLPGDRRDDLVAETAGSVAAWFSRVVVYEDNDLRGRQPGEMARLISQALARQRPGIRIVPAAGPDQALRHALGLAGPGDPVLFLYEKLAPVHTVLGSLGAVAWPPDAAASDVLGQPARSAGRRDHPLGHGLLTELVRVHGEGGRGRGHAFHPPDARPLADVVADAGRVGVHVGRPVGGGLGGEHLVQFLFHPAQVGHVAVGDGHGRPAAVAGVRQEVRIPHHQHPRLRCPLVDALKHRGHLGRGLADGLRQLISPARGVGVLAR

Samples

Sample ID Description Type Environment
1 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
2 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
3 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
4 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
5 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
6 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
7 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
8 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
9 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
10 2855730933 Achromobacter sp. HZ28 Isolate Nodule
11 2855767633 Achromobacter sp. HZ34 Isolate Nodule
12 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
13 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
14 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
15 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
16 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
17 2891562705 Microbispora tritici MT50 Isolate Unclassified
18 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
19 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
20 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
21 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
22 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
23 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
24 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
25 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
26 2919476304 Duganella sp. 3397 Isolate Unclassified
27 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
28 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
29 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
30 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
31 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
32 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
33 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
34 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
35 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
36 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
37 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
38 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
39 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
40 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
41 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
42 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
43 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
44 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
45 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
46 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
47 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
48 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
49 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
52 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
62 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
65 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
67 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
68 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
82 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
83 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
84 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
85 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
86 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
87 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
90 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
91 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
92 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
93 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
94 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
101 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
102 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
103 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
104 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
105 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
114 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
117 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
118 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
125 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
126 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
127 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
128 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
129 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
130 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
133 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
134 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
137 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
141 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
142 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
145 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
146 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
147 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
148 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
149 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
150 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
153 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
154 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
155 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
156 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
159 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
160 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
175 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
176 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
177 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
178 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
179 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
180 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
186 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
187 8007375930 Clostridium sp. YIM B02565 Isolate Unclassified
188 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
189 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.45
Metatranscriptomes 0
Isolates 12.55

Biome Distribution

Category Percentage (%)
Aerial Root 0.38
Bulb 0
Endosphere 9.13
Nodule 0.76
Rhizoplane 1.14
Rhizosphere 79.47
Stem 0
Stem Tuber 0
Unclassified 9.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1001631 3300002739 Bacteria 3867
2 JGI25150J39212_1001453 3300002774 Bacteria 6606
3 JGI25151J46595_10001497 3300003187 Bacteria 15697
4 Ga0055538_1000002 3300003751 Bacteria 999437
5 Ga0055539_1000002 3300003752 Bacteria 999437
6 Ga0055533_1000004 3300003756 Bacteria 999437
7 Ga0055525_1000002 3300003759 Bacteria 999437
8 Ga0055526_1000158 3300003771 Bacteria 60304
9 Ga0055536_1005424 3300003781 Bacteria 6237
10 Ga0055541_1000002 3300003841 Bacteria 896405
11 Ga0065165_1000759 3300005262 Bacteria 43896
12 Ga0070658_10043933 3300005327 Bacteria 3610
13 Ga0070669_100000033 3300005353 Bacteria 144544
14 Ga0070714_100016596 3300005435 Bacteria 5950
15 Ga0070713_100016619 3300005436 Bacteria 5535
16 Ga0070694_100021566 3300005444 Unclassified 4119
17 Ga0070708_100020332 3300005445 Bacteria 5596
18 Ga0070706_100001451 3300005467 Bacteria 24949
19 Ga0070706_100004244 3300005467 Bacteria 13910
20 Ga0070706_100007541 3300005467 Bacteria 10194
21 Ga0070706_100009467 3300005467 Bacteria 9062
22 Ga0070706_100009657 3300005467 Bacteria 8969
23 Ga0070707_100000401 3300005468 Bacteria 42604
24 Ga0070707_100003984 3300005468 Bacteria 13900
25 Ga0070707_100045459 3300005468 Bacteria 4203
26 Ga0070698_100000080 3300005471 Bacteria 73829
27 Ga0070698_100000919 3300005471 Bacteria 32170
28 Ga0070698_100013258 3300005471 Bacteria 8722
29 Ga0068853_100078227 3300005539 Bacteria 2890
30 Ga0070665_100000247 3300005548 Bacteria 89526
31 Ga0068855_100001741 3300005563 Bacteria 27181
32 Ga0068862_100000587 3300005844 Bacteria 37854
33 Ga0081455_10003617 3300005937 Bacteria 17713
34 Ga0081539_10000227 3300005985 Bacteria 132022
35 Ga0081539_10001922 3300005985 Bacteria 32066
36 Ga0075436_100008706 3300006914 Bacteria 6938
37 Ga0105240_10078125 3300009093 Bacteria 4076
38 Ga0111539_10018253 3300009094 Bacteria 8688
39 Ga0213872_10000489 3300021361 Bacteria 31637
40 Ga0213872_10000666 3300021361 Bacteria 26015
41 Ga0213872_10008098 3300021361 Bacteria 5105
42 Ga0209784_100002 3300025224 Bacteria 1753105
43 Ga0209566_100003 3300025225 Bacteria 1753105
44 Ga0209674_100004 3300025226 Bacteria 1753105
45 Ga0209563_100006 3300025230 Bacteria 1753105
46 Ga0209677_100003 3300025253 Bacteria 1753105
47 Ga0209675_1000126 3300025291 Bacteria 104792
48 Ga0209675_1006055 3300025291 Bacteria 4937
49 Ga0209676_1000566 3300025292 Bacteria 55814
50 Ga0209676_1003810 3300025292 Bacteria 8901
51 Ga0209676_1007298 3300025292 Bacteria 5229
52 Ga0209025_1000040 3300025294 Bacteria 376228
53 Ga0209050_1000047 3300025298 Bacteria 380561
54 Ga0209257_1006912 3300025304 Bacteria 7099
55 Ga0207699_10009298 3300025906 Bacteria 4887
56 Ga0207684_10002011 3300025910 Bacteria 20947
57 Ga0207684_10003476 3300025910 Bacteria 15368
58 Ga0207684_10005846 3300025910 Bacteria 11266
59 Ga0207646_10000691 3300025922 Bacteria 43602
60 Ga0207646_10016083 3300025922 Bacteria 7030
61 Ga0207646_10017259 3300025922 Bacteria 6760
62 Ga0207681_10000011 3300025923 Bacteria 366878
63 Ga0207700_10028495 3300025928 Bacteria 3927
64 Ga0207664_10010438 3300025929 Bacteria 6558
65 Ga0207667_10000036 3300025949 Bacteria 297966
66 Ga0207639_10072380 3300026041 Bacteria 2699
67 Ga0207428_10004218 3300027907 Bacteria 13757
68 Ga0268266_10003325 3300028379 Bacteria 16133
69 Ga0268265_10000991 3300028380 Bacteria 25781
70 Ga0265337_1000065 3300028556 Bacteria 48676
71 Ga0265326_10000501 3300028558 Bacteria 15115
72 Ga0265319_1000617 3300028563 Bacteria 23460
73 Ga0265334_10000297 3300028573 Bacteria 27857
74 Ga0265323_10003947 3300028653 Bacteria 6446
75 Ga0265323_10010588 3300028653 Bacteria 3735
76 Ga0265322_10001790 3300028654 Bacteria 6814
77 Ga0265336_10000183 3300028666 Bacteria 44089
78 Ga0265338_10004585 3300028800 Bacteria 18587
79 Ga0265338_10028927 3300028800 Bacteria 5512
80 Ga0307511_10001691 3300030521 Bacteria 23234
81 Ga0265330_10000638 3300031235 Bacteria 22519
82 Ga0265330_10002110 3300031235 Bacteria 10983
83 Ga0265330_10013614 3300031235 Bacteria 3788
84 Ga0265332_10000970 3300031238 Bacteria 16966
85 Ga0265320_10001169 3300031240 Bacteria 19320
86 Ga0265329_10000527 3300031242 Bacteria 19724
87 Ga0265316_10000051 3300031344 Bacteria 126739
88 Ga0265316_10000776 3300031344 Bacteria 35252
89 Ga0265316_10004594 3300031344 Bacteria 13702
90 Ga0265316_10011551 3300031344 Bacteria 7952
91 Ga0307513_10007311 3300031456 Bacteria 14340
92 Ga0307509_10000105 3300031507 Bacteria 119065
93 Ga0265314_10005850 3300031711 Bacteria 11011
94 Ga0265342_10002045 3300031712 Bacteria 17936
95 Ga0265342_10003074 3300031712 Bacteria 13958
96 Ga0307411_10009798 3300032005 Bacteria 5064
97 Ga0373929_0000005 3300035085 Bacteria 354831
98 Ga0373952_0001530 3300035092 Bacteria 4210
99 Ga0373953_0001855 3300035117 Bacteria 6256
100 Ga0373961_0001073 3300035241 Bacteria 8765
101 Ga0373924_0001819 3300035410 Bacteria 7049
102 Ga0373935_0009759 3300035692 Bacteria 5749
103 Ga0373935_0028302 3300035692 Bacteria 3463
104 Ga0373947_0000031 3300035725 Bacteria 73833
105 Ga0373937_0019160 3300036401 Bacteria 6124
106 Ga0373937_0028270 3300036401 Bacteria 5072
107 Ga0373925_0002974 3300037068 Bacteria 13381
108 Ga0373925_0006339 3300037068 Bacteria 8711
109 Ga0373925_0023166 3300037068 Bacteria 4531
110 Ga0395899_0001415 3300037312 Bacteria 20577
111 Ga0436361_0458802 3300039447 Bacteria 7439
112 Ga0436361_0504982 3300039447 Bacteria 102576
113 Ga0436361_0560696 3300039447 Bacteria 5389
114 Ga0436361_0863669 3300039447 Bacteria 11816
115 Ga0451577_0000013 3300042876 Bacteria 550689
116 Ga0451577_0001782 3300042876 Bacteria 27637
117 Ga0451577_0044327 3300042876 Bacteria 3983
118 Ga0453683_0000059 3300044673 Bacteria 187158
119 Ga0466964_0000845 3300044706 Bacteria 10027
120 Ga0453684_0000585 3300044712 Bacteria 135647
121 Ga0453684_0000989 3300044712 Bacteria 92793
122 Ga0453684_0003502 3300044712 Bacteria 35240
123 Ga0453684_0031465 3300044712 Bacteria 7456
124 Ga0466957_0026296 3300044842 Bacteria 3452
125 Ga0466959_0041010 3300045049 Bacteria 3419
126 Ga0451576_0000018 3300045051 Bacteria 550689
127 Ga0451576_0003177 3300045051 Bacteria 22950
128 Ga0451576_0026161 3300045051 Bacteria 6277
129 Ga0451576_0057083 3300045051 Bacteria 4081
130 Ga0495627_000055 3300046453 Bacteria 149482
131 Ga0495592_0011603 3300046454 Bacteria 6673
132 Ga0495629_0002932 3300046459 Bacteria 13014
133 Ga0495638_0000091 3300046460 Bacteria 146548
134 Ga0495651_0004544 3300046462 Bacteria 10611
135 Ga0495651_0011181 3300046462 Bacteria 6901
136 Ga0495653_0003312 3300046463 Bacteria 12932
137 Ga0495653_0014937 3300046463 Bacteria 6333
138 Ga0495653_0043122 3300046463 Bacteria 3509
139 Ga0495650_0000576 3300046471 Bacteria 51317
140 Ga0495582_0001383 3300046473 Bacteria 13653
141 Ga0495662_0002389 3300046476 Bacteria 9440
142 Ga0495583_0000197 3300046506 Bacteria 101236
143 Ga0495606_0008922 3300046507 Bacteria 8587
144 Ga0495608_0002075 3300046511 Bacteria 14432
145 Ga0495608_0006925 3300046511 Bacteria 8028
146 Ga0495616_0006613 3300046513 Bacteria 7001
147 Ga0495630_0029809 3300046517 Bacteria 4057
148 Ga0495643_0000287 3300046522 Bacteria 72080
149 Ga0495643_0001068 3300046522 Bacteria 27300
150 Ga0495643_0006208 3300046522 Bacteria 7927
151 Ga0495648_0000058 3300046524 Bacteria 156717
152 Ga0495642_0002279 3300046528 Bacteria 7827
153 Ga0495652_0033107 3300046529 Bacteria 4516
154 Ga0495587_0010943 3300046536 Bacteria 5754
155 Ga0495597_0000700 3300046542 Bacteria 26805
156 Ga0495645_0050721 3300046543 Bacteria 3020
157 Ga0495633_0000362 3300046558 Bacteria 48938
158 Ga0495667_0000184 3300046559 Bacteria 42368
159 Ga0495667_0004900 3300046559 Bacteria 9048
160 Ga0495668_0000150 3300046616 Bacteria 105516
161 Ga0495634_0008426 3300046642 Bacteria 7675
162 Ga0495625_0000132 3300046660 Bacteria 115728
163 Ga0495635_0016175 3300046663 Bacteria 5207
164 Ga0495657_0004818 3300046675 Bacteria 10758
165 Ga0495657_0005833 3300046675 Bacteria 9694
166 Ga0495657_0014710 3300046675 Bacteria 5742
167 Ga0495646_0007922 3300046680 Bacteria 6749
168 Ga0495658_0003499 3300046683 Bacteria 7772
169 Ga0495581_0001474 3300047315 Bacteria 13090
170 Ga0495604_0006255 3300047317 Bacteria 9443
171 Ga0495680_0003776 3300047322 Bacteria 14733
172 Ga0495680_0008637 3300047322 Bacteria 9247
173 Ga0495680_0016111 3300047322 Bacteria 6426
174 Ga0495687_002443 3300047443 Bacteria 14923
175 Ga0495687_011344 3300047443 Bacteria 4801
176 Ga0495675_0003296 3300047444 Bacteria 9706
177 Ga0495593_0002084 3300047673 Bacteria 11958
178 Ga0495602_0027267 3300048088 Bacteria 5492
179 Ga0495602_0050730 3300048088 Bacteria 3704
180 Ga0495626_0000122 3300048091 Bacteria 101672
181 Ga0496109_0000100 3300048912 Bacteria 89897
182 Ga0496109_0000879 3300048912 Bacteria 25064
183 Ga0496110_0000615 3300048913 Bacteria 24551
184 Ga0496124_0006318 3300048927 Bacteria 12939
185 Ga0495678_000980 3300049459 Bacteria 24522
186 Ga0495678_009571 3300049459 Bacteria 4783
187 Ga0501031_0001344 3300049568 Bacteria 15143
188 Ga0501032_0003669 3300049569 Bacteria 11678
189 Ga0501033_0000507 3300049570 Bacteria 36643
190 Ga0501033_0007319 3300049570 Bacteria 8606
191 Ga0501034_0008897 3300049571 Bacteria 10552
192 Ga0501034_0029749 3300049571 Bacteria 5553
193 Ga0501036_0000319 3300049572 Bacteria 33522
194 Ga0501037_0001674 3300049573 Bacteria 16119
195 Ga0501037_0007703 3300049573 Bacteria 7881
196 Ga0501037_0019415 3300049573 Bacteria 5013
197 Ga0501038_0001134 3300049574 Bacteria 24160
198 Ga0501038_0031116 3300049574 Bacteria 4718
199 Ga0501042_0014890 3300049578 Bacteria 5315
200 Ga0501043_0000090 3300049579 Bacteria 81336
201 Ga0501043_0002846 3300049579 Bacteria 14452
202 Ga0501043_0003803 3300049579 Bacteria 12412
203 Ga0501046_0000126 3300049580 Bacteria 81334
204 Ga0501046_0004743 3300049580 Bacteria 12270
205 Ga0501047_0000160 3300049581 Bacteria 81946
206 Ga0501047_0003924 3300049581 Bacteria 13979
207 Ga0501047_0006791 3300049581 Bacteria 10752
208 Ga0501047_0007578 3300049581 Bacteria 10217
209 Ga0501047_0028271 3300049581 Bacteria 5405
210 Ga0501047_0043177 3300049581 Bacteria 4355
211 Ga0501048_0000040 3300049582 Bacteria 63031
212 Ga0501073_0058219 3300049589 Bacteria 2701
213 Ga0501074_0005629 3300049590 Bacteria 9024
214 Ga0501077_0000256 3300049593 Bacteria 31435
215 Ga0501202_001206 3300049652 Bacteria 4079
216 Ga0501227_003786 3300049665 Bacteria 3271
217 Ga0501080_0006528 3300049742 Bacteria 10479
218 Ga0501083_0003603 3300049744 Bacteria 10861
219 Ga0501280_001419 3300049776 Bacteria 4454
220 Ga0501035_0013183 3300049822 Bacteria 7629
221 Ga0501044_0000160 3300049823 Bacteria 83543
222 Ga0501044_0000322 3300049823 Bacteria 60519
223 Ga0501044_0004052 3300049823 Bacteria 16437
224 Ga0501044_0014736 3300049823 Bacteria 8429
225 nmdc:mga06r32_5092_c2 3300050510 Bacteria 7975
226 nmdc:mga06r32_7773_c1 3300050510 Bacteria 9638
227 nmdc:mga08x19_11231_c1 3300050514 Bacteria 5391
228 nmdc:mga0a205_17763_c1 3300050515 Unclassified 3158
229 Ga0495612_0002189 3300053078 Bacteria 8039
230 Ga0501082_0000043 3300060353 Bacteria 89262

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047317 Ga0495604_0006255 Ga0495604_0006255_18_2306 700
2 iso_pu_bacteria 2984568884 2984569097 744
3 3300035117 Ga0373953_0001855 Ga0373953_0001855_790_3435 793
4 3300035410 Ga0373924_0001819 Ga0373924_0001819_1583_4228 793
5 3300035692 Ga0373935_0028302 Ga0373935_0028302_775_3420 793
6 3300036401 Ga0373937_0019160 Ga0373937_0019160_1282_3927 793
7 3300046459 Ga0495629_0002932 Ga0495629_0002932_6857_9502 793
8 3300046462 Ga0495651_0011181 Ga0495651_0011181_296_2941 793
9 3300046473 Ga0495582_0001383 Ga0495582_0001383_5195_7840 793
10 3300046476 Ga0495662_0002389 Ga0495662_0002389_3335_5980 793
11 3300046536 Ga0495587_0010943 Ga0495587_0010943_296_2941 793
12 3300046543 Ga0495645_0050721 Ga0495645_0050721_80_2725 793
13 3300046559 Ga0495667_0004900 Ga0495667_0004900_5015_7660 793
14 3300046642 Ga0495634_0008426 Ga0495634_0008426_3621_6266 793
15 3300046675 Ga0495657_0004818 Ga0495657_0004818_6832_9477 793
16 3300046683 Ga0495658_0003499 Ga0495658_0003499_2300_4945 793
17 3300047315 Ga0495581_0001474 Ga0495581_0001474_7007_9652 793
18 3300047322 Ga0495680_0016111 Ga0495680_0016111_1389_4034 793
19 3300047444 Ga0495675_0003296 Ga0495675_0003296_2974_5619 793
20 3300047673 Ga0495593_0002084 Ga0495593_0002084_8272_10917 793
21 3300048088 Ga0495602_0050730 Ga0495602_0050730_892_3537 793
22 3300053078 Ga0495612_0002189 Ga0495612_0002189_791_3436 793
23 3300046454 Ga0495592_0011603 Ga0495592_0011603_235_2910 794
24 3300046462 Ga0495651_0004544 Ga0495651_0004544_3950_6625 794
25 3300046463 Ga0495653_0003312 Ga0495653_0003312_2675_5350 794
26 3300046559 Ga0495667_0000184 Ga0495667_0000184_27953_30628 794
27 3300046663 Ga0495635_0016175 Ga0495635_0016175_1378_4053 794
28 3300046675 Ga0495657_0005833 Ga0495657_0005833_3669_6344 794
29 3300046680 Ga0495646_0007922 Ga0495646_0007922_136_2811 794
30 3300047322 Ga0495680_0003776 Ga0495680_0003776_7495_10170 794
31 3300048088 Ga0495602_0027267 Ga0495602_0027267_1618_4293 794
32 3300037068 Ga0373925_0023166 Ga0373925_0023166_42_2762 796
33 3300050515 nmdc:mga0a205_17763_c1 nmdc:mga0a205_17763_c1_596_3103 798
34 3300037068 Ga0373925_0002974 Ga0373925_0002974_9164_11821 802
35 3300005436 Ga0070713_100016619 Ga0070713_1000166194 803
36 3300025928 Ga0207700_10028495 Ga0207700_100284951 803
37 3300025929 Ga0207664_10010438 Ga0207664_100104383 803
38 3300005467 Ga0070706_100001451 Ga0070706_10000145111 807
39 3300005468 Ga0070707_100000401 Ga0070707_10000040122 807
40 3300005471 Ga0070698_100000080 Ga0070698_10000008022 807
41 3300025910 Ga0207684_10002011 Ga0207684_1000201111 807
42 3300025922 Ga0207646_10000691 Ga0207646_1000069121 807
43 3300046511 Ga0495608_0002075 Ga0495608_0002075_4363_7038 807
44 3300005435 Ga0070714_100016596 Ga0070714_1000165962 809
45 3300005445 Ga0070708_100020332 Ga0070708_1000203323 810
46 3300049569 Ga0501032_0003669 Ga0501032_0003669_3120_5777 813
47 3300049570 Ga0501033_0000507 Ga0501033_0000507_9328_11985 813
48 3300049574 Ga0501038_0031116 Ga0501038_0031116_451_3108 813
49 3300049581 Ga0501047_0028271 Ga0501047_0028271_2097_4754 813
50 3300049823 Ga0501044_0000160 Ga0501044_0000160_53132_55789 813
51 3300032005 Ga0307411_10009798 Ga0307411_100097983 817
52 3300049744 Ga0501083_0003603 Ga0501083_0003603_7362_10055 819
53 3300025292 Ga0209676_1003810 Ga0209676_10038102 820
54 3300025906 Ga0207699_10009298 Ga0207699_100092983 823
55 3300003781 Ga0055536_1005424 Ga0055536_10054244 826
56 3300025291 Ga0209675_1000126 Ga0209675_100012664 826
57 3300025292 Ga0209676_1000566 Ga0209676_100056655 826
58 3300025298 Ga0209050_1000047 Ga0209050_100004731 826
59 3300025304 Ga0209257_1006912 Ga0209257_10069124 826
60 3300044712 Ga0453684_0031465 Ga0453684_0031465_330_2981 826
61 3300049652 Ga0501202_001206 Ga0501202_001206_592_3261 827
62 3300049665 Ga0501227_003786 Ga0501227_003786_25_2682 827
63 3300009094 Ga0111539_10018253 Ga0111539_100182536 828
64 3300027907 Ga0207428_10004218 Ga0207428_100042187 828
65 3300045049 Ga0466959_0041010 Ga0466959_0041010_528_3212 828
66 3300048912 Ga0496109_0000100 Ga0496109_0000100_70727_73342 828
67 3300048912 Ga0496109_0000879 Ga0496109_0000879_15925_18537 828
68 3300050510 nmdc:mga06r32_5092_c2 nmdc:mga06r32_5092_c2_83_2695 828
69 3300050510 nmdc:mga06r32_7773_c1 nmdc:mga06r32_7773_c1_211_2826 828
70 3300049589 Ga0501073_0058219 Ga0501073_0058219_28_2622 831
71 3300005467 Ga0070706_100004244 Ga0070706_1000042446 833
72 3300005471 Ga0070698_100013258 Ga0070698_1000132582 833
73 3300025910 Ga0207684_10003476 Ga0207684_100034764 833
74 3300035725 Ga0373947_0000031 Ga0373947_0000031_9959_12817 833
75 3300003187 JGI25151J46595_10001497 JGI25151J46595_100014972 834
76 3300005467 Ga0070706_100007541 Ga0070706_10000754110 834
77 3300025294 Ga0209025_1000040 Ga0209025_100004059 834
78 3300035692 Ga0373935_0009759 Ga0373935_0009759_627_3485 834
79 3300036401 Ga0373937_0028270 Ga0373937_0028270_1564_4353 835
80 3300046463 Ga0495653_0014937 Ga0495653_0014937_834_3668 835
81 3300046511 Ga0495608_0006925 Ga0495608_0006925_2998_5832 835
82 3300046675 Ga0495657_0014710 Ga0495657_0014710_2197_5031 835
83 3300047322 Ga0495680_0008637 Ga0495680_0008637_755_3589 835
84 3300037068 Ga0373925_0006339 Ga0373925_0006339_3421_6567 836
85 3300046616 Ga0495668_0000150 Ga0495668_0000150_43645_46281 836
86 3300005539 Ga0068853_100078227 Ga0068853_1000782271 838
87 3300026041 Ga0207639_10072380 Ga0207639_100723801 838
88 3300049581 Ga0501047_0043177 Ga0501047_0043177_857_3529 840
89 3300042876 Ga0451577_0000013 Ga0451577_0000013_468000_470570 841
90 3300044673 Ga0453683_0000059 Ga0453683_0000059_104469_107039 841
91 3300044712 Ga0453684_0000585 Ga0453684_0000585_52958_55528 841
92 3300045051 Ga0451576_0000018 Ga0451576_0000018_80120_82690 841
93 3300037312 Ga0395899_0001415 Ga0395899_0001415_15782_18370 844
94 iso_pu_bacteria 2861520306 2861522139 844
95 3300005844 Ga0068862_100000587 Ga0068862_10000058713 845
96 3300006914 Ga0075436_100008706 Ga0075436_1000087064 845
97 3300028380 Ga0268265_10000991 Ga0268265_1000099118 845
98 3300035085 Ga0373929_0000005 Ga0373929_0000005_274684_277473 845
99 3300035241 Ga0373961_0001073 Ga0373961_0001073_3463_6183 845
100 3300049593 Ga0501077_0000256 Ga0501077_0000256_15812_18532 845
101 3300049742 Ga0501080_0006528 Ga0501080_0006528_3267_5987 845
102 3300050514 nmdc:mga08x19_11231_c1 nmdc:mga08x19_11231_c1_1621_4335 845
103 3300060353 Ga0501082_0000043 Ga0501082_0000043_15263_17983 845
104 iso_pu_bacteria 2856741275 2856745686 845
105 iso_pu_bacteria 2891562705 2891569484 845
106 iso_pu_bacteria 8007375930 8007378358 845
107 3300005327 Ga0070658_10043933 Ga0070658_100439331 846
108 3300005353 Ga0070669_100000033 Ga0070669_10000003329 846
109 3300005548 Ga0070665_100000247 Ga0070665_10000024767 846
110 3300025923 Ga0207681_10000011 Ga0207681_10000011208 846
111 3300028379 Ga0268266_10003325 Ga0268266_100033256 846
112 iso_pu_bacteria 8053945823 8053952914 846
113 3300005467 Ga0070706_100009467 Ga0070706_1000094673 847
114 3300005468 Ga0070707_100003984 Ga0070707_1000039847 847
115 3300025922 Ga0207646_10017259 Ga0207646_100172595 847
116 3300030521 Ga0307511_10001691 Ga0307511_100016912 847
117 3300049459 Ga0495678_000980 Ga0495678_000980_16043_18613 847
118 iso_pu_bacteria 2857737099 2857739605 847
119 3300009093 Ga0105240_10078125 Ga0105240_100781252 848
120 3300049573 Ga0501037_0019415 Ga0501037_0019415_336_2975 848
121 3300005467 Ga0070706_100009657 Ga0070706_1000096577 849
122 3300005468 Ga0070707_100045459 Ga0070707_1000454592 849
123 3300005471 Ga0070698_100000919 Ga0070698_10000091926 849
124 3300005985 Ga0081539_10000227 Ga0081539_1000022790 849
125 3300005985 Ga0081539_10001922 Ga0081539_1000192225 849
126 3300025910 Ga0207684_10005846 Ga0207684_1000584610 849
127 3300025922 Ga0207646_10016083 Ga0207646_100160834 849
128 3300028556 Ga0265337_1000065 Ga0265337_10000653 849
129 3300028558 Ga0265326_10000501 Ga0265326_1000050112 849
130 3300028563 Ga0265319_1000617 Ga0265319_100061714 849
131 3300028573 Ga0265334_10000297 Ga0265334_100002975 849
132 3300028654 Ga0265322_10001790 Ga0265322_100017902 849
133 3300028800 Ga0265338_10004585 Ga0265338_1000458512 849
134 3300031238 Ga0265332_10000970 Ga0265332_100009707 849
135 3300031240 Ga0265320_10001169 Ga0265320_100011696 849
136 3300031711 Ga0265314_10005850 Ga0265314_100058502 849
137 3300031712 Ga0265342_10002045 Ga0265342_1000204513 849
138 3300049573 Ga0501037_0007703 Ga0501037_0007703_2342_5038 849
139 3300049823 Ga0501044_0004052 Ga0501044_0004052_7915_10611 849
140 3300049823 Ga0501044_0014736 Ga0501044_0014736_1257_3983 849
141 3300005444 Ga0070694_100021566 Ga0070694_1000215662 850
142 3300005937 Ga0081455_10003617 Ga0081455_100036172 850
143 3300031456 Ga0307513_10007311 Ga0307513_100073117 850
144 3300048913 Ga0496110_0000615 Ga0496110_0000615_9694_12339 850
145 3300049571 Ga0501034_0029749 Ga0501034_0029749_2074_4725 850
146 3300049578 Ga0501042_0014890 Ga0501042_0014890_233_2884 850
147 3300049579 Ga0501043_0003803 Ga0501043_0003803_241_2892 850
148 3300049581 Ga0501047_0007578 Ga0501047_0007578_4571_7222 850
149 3300049590 Ga0501074_0005629 Ga0501074_0005629_2157_4808 850
150 iso_pu_bacteria 2919476304 2919478755 850
151 3300025292 Ga0209676_1007298 Ga0209676_10072982 852
152 3300044842 Ga0466957_0026296 Ga0466957_0026296_133_2862 852
153 iso_pu_bacteria 2521172590 2521558128 852
154 iso_pu_bacteria 2551306416 2553003254 852
155 iso_pu_bacteria 2643221560 2643822610 852
156 iso_pu_bacteria 2643221560 2643823185 852
157 iso_pu_bacteria 2643221563 2643834167 852
158 iso_pu_bacteria 2643221608 2644055092 852
159 iso_pu_bacteria 2739367655 2739613705 852
160 iso_pu_bacteria 2818991449 2819614728 852
161 iso_pu_bacteria 2852653556 2852656809 852
162 iso_pu_bacteria 2852680915 2852682009 852
163 iso_pu_bacteria 2855730933 2855736582 852
164 iso_pu_bacteria 2855767633 2855773519 852
165 iso_pu_bacteria 2881412998 2881418489 852
166 iso_pu_bacteria 2881927736 2881928783 852
167 iso_pu_bacteria 2904439833 2904441097 852
168 iso_pu_bacteria 2904530477 2904531960 852
169 iso_pu_bacteria 2904584206 2904587814 852
170 iso_pu_bacteria 2904589729 2904590026 852
171 iso_pu_bacteria 2904601388 2904602586 852
172 iso_pu_bacteria 2919046199 2919046592 852
173 iso_pu_bacteria 2919079590 2919079908 852
174 iso_pu_bacteria 2923510766 2923511376 852
175 iso_pu_bacteria 2928130867 2928131308 852
176 iso_pu_bacteria 8055225921 8055226832 852
177 3300049579 Ga0501043_0000090 Ga0501043_0000090_55605_58208 853
178 3300049580 Ga0501046_0000126 Ga0501046_0000126_55603_58206 853
179 3300049581 Ga0501047_0000160 Ga0501047_0000160_23129_25732 853
180 3300049582 Ga0501048_0000040 Ga0501048_0000040_4763_7366 853
181 iso_pu_bacteria 2919138771 2919142351 853
182 3300046507 Ga0495606_0008922 Ga0495606_0008922_5913_8534 855
183 3300002739 JGI25158J39367_1001631 JGI25158J39367_10016311 856
184 3300002774 JGI25150J39212_1001453 JGI25150J39212_10014533 856
185 3300003751 Ga0055538_1000002 Ga0055538_1000002525 856
186 3300003752 Ga0055539_1000002 Ga0055539_1000002525 856
187 3300003756 Ga0055533_1000004 Ga0055533_1000004525 856
188 3300003759 Ga0055525_1000002 Ga0055525_1000002525 856
189 3300003771 Ga0055526_1000158 Ga0055526_100015823 856
190 3300003841 Ga0055541_1000002 Ga0055541_1000002318 856
191 3300005262 Ga0065165_1000759 Ga0065165_100075917 856
192 3300005563 Ga0068855_100001741 Ga0068855_1000017418 856
193 3300021361 Ga0213872_10000489 Ga0213872_1000048921 856
194 3300021361 Ga0213872_10000666 Ga0213872_1000066624 856
195 3300021361 Ga0213872_10008098 Ga0213872_100080982 856
196 3300025224 Ga0209784_100002 Ga0209784_100002752 856
197 3300025225 Ga0209566_100003 Ga0209566_100003752 856
198 3300025226 Ga0209674_100004 Ga0209674_100004752 856
199 3300025230 Ga0209563_100006 Ga0209563_100006752 856
200 3300025253 Ga0209677_100003 Ga0209677_100003752 856
201 3300025291 Ga0209675_1006055 Ga0209675_10060552 856
202 3300025949 Ga0207667_10000036 Ga0207667_1000003641 856
203 3300028653 Ga0265323_10003947 Ga0265323_100039472 856
204 3300028653 Ga0265323_10010588 Ga0265323_100105882 856
205 3300028666 Ga0265336_10000183 Ga0265336_1000018314 856
206 3300028800 Ga0265338_10028927 Ga0265338_100289273 856
207 3300031235 Ga0265330_10000638 Ga0265330_100006387 856
208 3300031235 Ga0265330_10002110 Ga0265330_100021102 856
209 3300031235 Ga0265330_10013614 Ga0265330_100136142 856
210 3300031242 Ga0265329_10000527 Ga0265329_1000052713 856
211 3300031344 Ga0265316_10000051 Ga0265316_1000005160 856
212 3300031344 Ga0265316_10000776 Ga0265316_1000077619 856
213 3300031344 Ga0265316_10004594 Ga0265316_100045948 856
214 3300031344 Ga0265316_10011551 Ga0265316_100115512 856
215 3300031507 Ga0307509_10000105 Ga0307509_1000010594 856
216 3300031712 Ga0265342_10003074 Ga0265342_100030744 856
217 3300035092 Ga0373952_0001530 Ga0373952_0001530_641_3211 856
218 3300039447 Ga0436361_0458802 Ga0436361_0458802_1143_3713 856
219 3300039447 Ga0436361_0504982 Ga0436361_0504982_98894_101467 856
220 3300039447 Ga0436361_0560696 Ga0436361_0560696_1623_4196 856
221 3300039447 Ga0436361_0863669 Ga0436361_0863669_4250_6823 856
222 3300042876 Ga0451577_0001782 Ga0451577_0001782_18316_20886 856
223 3300042876 Ga0451577_0044327 Ga0451577_0044327_971_3541 856
224 3300044706 Ga0466964_0000845 Ga0466964_0000845_3463_6108 856
225 3300044712 Ga0453684_0000989 Ga0453684_0000989_63611_66181 856
226 3300044712 Ga0453684_0003502 Ga0453684_0003502_29805_32378 856
227 3300045051 Ga0451576_0003177 Ga0451576_0003177_180_2750 856
228 3300045051 Ga0451576_0026161 Ga0451576_0026161_151_2721 856
229 3300045051 Ga0451576_0057083 Ga0451576_0057083_1235_3916 856
230 3300046453 Ga0495627_000055 Ga0495627_000055_8924_11500 856
231 3300046460 Ga0495638_0000091 Ga0495638_0000091_53806_56376 856
232 3300046463 Ga0495653_0043122 Ga0495653_0043122_730_3300 856
233 3300046471 Ga0495650_0000576 Ga0495650_0000576_1407_3977 856
234 3300046506 Ga0495583_0000197 Ga0495583_0000197_54_2624 856
235 3300046513 Ga0495616_0006613 Ga0495616_0006613_4234_6804 856
236 3300046517 Ga0495630_0029809 Ga0495630_0029809_1297_3867 856
237 3300046522 Ga0495643_0000287 Ga0495643_0000287_38_2608 856
238 3300046522 Ga0495643_0001068 Ga0495643_0001068_4578_7148 856
239 3300046522 Ga0495643_0006208 Ga0495643_0006208_2661_5234 856
240 3300046524 Ga0495648_0000058 Ga0495648_0000058_136267_138837 856
241 3300046528 Ga0495642_0002279 Ga0495642_0002279_543_3113 856
242 3300046529 Ga0495652_0033107 Ga0495652_0033107_1800_4382 856
243 3300046542 Ga0495597_0000700 Ga0495597_0000700_8658_11228 856
244 3300046558 Ga0495633_0000362 Ga0495633_0000362_15800_18370 856
245 3300046660 Ga0495625_0000132 Ga0495625_0000132_102337_104907 856
246 3300047443 Ga0495687_002443 Ga0495687_002443_10740_13310 856
247 3300047443 Ga0495687_011344 Ga0495687_011344_618_3188 856
248 3300048091 Ga0495626_0000122 Ga0495626_0000122_61537_64113 856
249 3300048927 Ga0496124_0006318 Ga0496124_0006318_4073_6643 856
250 3300049459 Ga0495678_009571 Ga0495678_009571_2130_4700 856
251 3300049568 Ga0501031_0001344 Ga0501031_0001344_5902_8532 856
252 3300049570 Ga0501033_0007319 Ga0501033_0007319_3192_5822 856
253 3300049571 Ga0501034_0008897 Ga0501034_0008897_6239_8869 856
254 3300049572 Ga0501036_0000319 Ga0501036_0000319_28723_31353 856
255 3300049573 Ga0501037_0001674 Ga0501037_0001674_12925_15555 856
256 3300049574 Ga0501038_0001134 Ga0501038_0001134_14275_16905 856
257 3300049579 Ga0501043_0002846 Ga0501043_0002846_5299_7929 856
258 3300049580 Ga0501046_0004743 Ga0501046_0004743_8793_11423 856
259 3300049581 Ga0501047_0003924 Ga0501047_0003924_1751_4381 856
260 3300049581 Ga0501047_0006791 Ga0501047_0006791_2045_4675 856
261 3300049776 Ga0501280_001419 Ga0501280_001419_875_3454 856
262 3300049822 Ga0501035_0013183 Ga0501035_0013183_4330_6960 856
263 3300049823 Ga0501044_0000322 Ga0501044_0000322_24337_26967 856

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF18921

Cyanophycin_syn

Cyanophycin synthase-like N-terminal domain

22

120

0.95

PF02875

Mur_ligase_C

Mur ligase, glutamate ligase domain

728

854

0.86

PF08443

RimK

RimK-like ATP-grasp domain

217

328

0.83

PF08245

Mur_ligase_M

Mur ligase middle domain

501

703

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9554 1 852
7waf-assembly1.cif.gz_C trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9505 1 704
7waf-assembly1.cif.gz_B trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.95 1 852
7waf-assembly1.cif.gz_C trichodesmium erythraeum cyanophycin synthetase 1 (tecpha1) with atpgammas and 4x(beta-asp-arg) 0.9238 1 704
7lgj-assembly1.cif.gz_A cyanophycin synthetase 1 from synechocystis sp. utex2470 with adpcp and 8x(asp-arg)-nh2 0.9198 1 852
ID Description Score Start End Superfamily
af_A4I7A2_198_259_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.892 227 285 3.30.1490.20
af_Q58881_123_195_3.30.1490.20 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8884 216 282 3.30.1490.20
4bubB03 Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Mur ligase, C-terminal domain 0.8831 721 838 3.90.190.20
1bxrG07 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.8768 220 285 3.30.1490.20
1c3oA03 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;ATP-grasp fold, A domain 0.871 220 285 3.30.1490.20
ID Description Score Start End GO Terms
AF-D9PKB3-F1-model_v4 Cyanophycin synthetase 0.9815 712 809 GO:0009058
GO:0016881
AF-A0A011QCB1-F1-model_v4 Cyanophycin synthetase (EC 6.3.2.29) 0.9768 680 856 GO:0009058
GO:0071160
AF-A0A536UQT2-F1-model_v4 Cyanophycin synthetase 0.9754 708 855 GO:0009058
GO:0016881
AF-A0A4Q3JEI8-F1-model_v4 deleted 0.9711 1 130
AF-Q5QCP3-F1-model_v4 Cyanophycin synthase (L-aspartate-adding) 0.9687 441 853 GO:0004326
GO:0005524

Feature Viewer

pLDDT pTM Quality
92.68 0.88 High
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Predicted Structure (AlphaFold2)

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