F371847

General Info

Members Datasets Scaffolds Average Seq Length
263 213 526 262

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10004282|Ga0105237_100042823
Length 282
Sequence VGRLPDHDDVHMTKQTAPAHQREAVDAAAARLESATRTGTPCAPITDLIGHHDIALAYQVQLKLTTRRCAAGARVIGRKIGLTSAAVQSQVGVDRPDFGVLFDDMKFLDGQHIPYERLLQPKAEGEIAFVLGRDITSVDTRDAVRSAVTVALPAIEIVDSRIAQWRIGITDTVADNASSGVFVIGERGVPLDRFEPVSTAMEMRRGGVTISAGTGSDCLGDPLSALAWLAETAIEFGDPLRAGDIVLSGALGPMVDVRPSDNVVVDIEPLGAVTAIFTEGIK

Samples

Sample ID Description Type Environment
1 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
27 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
28 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
29 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
30 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
31 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
64 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
65 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
69 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
70 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
71 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
72 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
82 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
85 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
86 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
87 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
90 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
94 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
95 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
96 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
97 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
101 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
102 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
103 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
104 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
105 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
108 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
111 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
112 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
115 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
116 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
117 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
118 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
119 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
124 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
125 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
126 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
127 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
128 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
130 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
135 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
136 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
137 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
138 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
139 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
142 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
143 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
144 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
145 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
146 2508501039 Frankia saprophytica CN3 Isolate Nodule
147 2517572101 Frankia sp. DC12 Isolate Nodule
148 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
149 2554235234 Klebsiella michiganensis SA2 Isolate Unclassified
150 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
151 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
152 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
153 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
154 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
155 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
156 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
157 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
158 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
159 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
160 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
161 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
162 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
163 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
164 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
165 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
166 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
167 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
168 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
169 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
170 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
171 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
172 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
173 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
174 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
175 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
176 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
177 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
178 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
179 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
180 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
181 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
182 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
183 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
184 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
185 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
186 2636415599 Klebsiella variicola DX120E Isolate Unclassified
187 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
188 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
189 2687453737 Frankia sp. BMG5.36 Isolate Nodule
190 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
191 2775507074 Klebsiella sp. D5A Isolate Unclassified
192 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
193 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
194 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
195 2867475112 Streptomyces sp. TM32 Isolate Unclassified
196 2884086401 Kluyvera sp. PO2S7 Isolate Rhizosphere
197 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
198 2891048133 Martelella lutilitoris GH2-6 Isolate Rhizosphere
199 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
200 2919108558 Klebsiella sp. 1400 Isolate Rhizosphere
201 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
202 2939573065 Citrobacter sp. 506 Isolate Rhizosphere
203 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
204 2971820967 Klebsiella sp. MPUS7 Isolate Rhizosphere
205 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
206 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
207 3000376612 Enterobacteriaceae bacterium 4M9 Isolate Rhizosphere
208 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
209 8002392321 Alcaligenes faecalis Mc250 Isolate Rhizosphere
210 8002775197 Frankia nepalensis CN7 Isolate Nodule
211 8002784119 Frankia sp. AgB1.9 Isolate Nodule
212 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
213 8056172158 Pseudomonas ekonensis COR58 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 74.14
Metatranscriptomes 0
Isolates 25.86

Biome Distribution

Category Percentage (%)
Aerial Root 0.76
Bulb 0
Endosphere 6.84
Nodule 4.18
Rhizoplane 14.07
Rhizosphere 61.6
Stem 0
Stem Tuber 0
Unclassified 0.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105237_10004282 3300009545 Bacteria 16557
2 JGI24740J21852_10004751 3300001979 Bacteria 5804
3 JGI24737J22298_10013837 3300001990 Bacteria 2624
4 Ga0065714_10002976 3300005288 Bacteria 9924
5 Ga0070668_100007219 3300005347 Bacteria 8238
6 Ga0070668_100028499 3300005347 Bacteria 4239
7 Ga0070667_100588985 3300005367 Bacteria 1024
8 Ga0070663_100134254 3300005455 Bacteria 1883
9 Ga0070665_100515449 3300005548 Bacteria 1207
10 Ga0068855_100075997 3300005563 Bacteria 3899
11 Ga0068855_100392731 3300005563 Bacteria 1521
12 Ga0068857_100119667 3300005577 Bacteria 2370
13 Ga0068854_100002662 3300005578 Bacteria 11078
14 Ga0068854_100010954 3300005578 Bacteria 5884
15 Ga0068856_100094146 3300005614 Bacteria 2982
16 Ga0068856_100215492 3300005614 Bacteria 1935
17 Ga0068852_100472675 3300005616 Bacteria 1244
18 Ga0068851_10015819 3300005834 Bacteria 3600
19 Ga0068862_100023060 3300005844 Bacteria 5213
20 Ga0081539_10001862 3300005985 Bacteria 33219
21 Ga0075365_10073428 3300006038 Bacteria 2306
22 Ga0075363_100005488 3300006048 Bacteria 5650
23 Ga0075364_10349147 3300006051 Unclassified 1008
24 Ga0075362_10011624 3300006177 Unclassified 3474
25 Ga0075366_10002546 3300006195 Bacteria 9373
26 Ga0075370_10001354 3300006353 Bacteria 10555
27 Ga0075370_10053610 3300006353 Bacteria 2289
28 Ga0075428_100010294 3300006844 Bacteria 10379
29 Ga0075430_100149554 3300006846 Bacteria 1945
30 Ga0075431_100002104 3300006847 Bacteria 19025
31 Ga0075431_100058000 3300006847 Bacteria 3993
32 Ga0079104_1002857 3300006946 Bacteria 8652
33 Ga0099826_10011905 3300006948 Bacteria 6553
34 Ga0099795_10003508 3300007788 Bacteria 3893
35 Ga0099795_10077385 3300007788 Bacteria 1267
36 Ga0105251_10000064 3300009011 Bacteria 100095
37 Ga0105251_10000105 3300009011 Bacteria 83319
38 Ga0105251_10077297 3300009011 Bacteria 1544
39 Ga0105244_10001542 3300009036 Bacteria 18346
40 Ga0105250_10000052 3300009092 Bacteria 116382
41 Ga0105250_10000053 3300009092 Bacteria 114563
42 Ga0105243_10098060 3300009148 Bacteria 2427
43 Ga0105241_10125211 3300009174 Bacteria 2074
44 Ga0105237_10001013 3300009545 Bacteria 37790
45 Ga0105237_10207210 3300009545 Bacteria 1961
46 Ga0105238_10000514 3300009551 Bacteria 40634
47 Ga0099796_10033737 3300010159 Bacteria 1686
48 Ga0105239_10000626 3300010375 Bacteria 50329
49 Ga0105239_10001157 3300010375 Bacteria 36242
50 Ga0105239_10011168 3300010375 Bacteria 10022
51 Ga0105239_10040307 3300010375 Bacteria 5117
52 Ga0157326_1001009 3300012513 Bacteria 3178
53 Ga0163161_10000201 3300017792 Bacteria 54704
54 Ga0163161_10002299 3300017792 Bacteria 13707
55 Ga0163161_10013990 3300017792 Bacteria 5587
56 Ga0209257_1002136 3300025304 Bacteria 20605
57 Ga0207656_10010781 3300025321 Bacteria 3435
58 Ga0207696_1000003 3300025711 Bacteria 860639
59 Ga0207696_1000116 3300025711 Bacteria 148125
60 Ga0207655_1024638 3300025728 Bacteria 2943
61 Ga0207713_1000002 3300025735 Bacteria 1061749
62 Ga0207713_1000003 3300025735 Bacteria 860698
63 Ga0207647_10001831 3300025904 Bacteria 16309
64 Ga0207654_10000069 3300025911 Bacteria 67460
65 Ga0207695_10008866 3300025913 Bacteria 12526
66 Ga0207671_10010953 3300025914 Bacteria 7430
67 Ga0207671_10012389 3300025914 Bacteria 6859
68 Ga0207671_10076323 3300025914 Bacteria 2507
69 Ga0207671_10415981 3300025914 Bacteria 1070
70 Ga0207694_10000120 3300025924 Bacteria 83624
71 Ga0207700_10338238 3300025928 Bacteria 1308
72 Ga0207709_10068305 3300025935 Bacteria 2246
73 Ga0207691_10173864 3300025940 Bacteria 1885
74 Ga0207679_10623343 3300025945 Bacteria 974
75 Ga0207667_10041854 3300025949 Bacteria 4871
76 Ga0207667_10050218 3300025949 Bacteria 4401
77 Ga0207667_10276599 3300025949 Bacteria 1716
78 Ga0207668_10020829 3300025972 Bacteria 4174
79 Ga0207640_10102318 3300025981 Bacteria 2012
80 Ga0207639_10013881 3300026041 Bacteria 5650
81 Ga0207639_10079987 3300026041 Bacteria 2584
82 Ga0207678_10075496 3300026067 Bacteria 2887
83 Ga0207702_10000019 3300026078 Bacteria 211843
84 Ga0207648_10818663 3300026089 Bacteria 867
85 Ga0207674_10007903 3300026116 Bacteria 12354
86 Ga0207674_10113876 3300026116 Bacteria 2677
87 Ga0207675_100009534 3300026118 Bacteria 9080
88 Ga0207698_10168147 3300026142 Bacteria 1927
89 Ga0207698_10374629 3300026142 Bacteria 1352
90 Ga0209281_1006100 3300027111 Bacteria 3199
91 Ga0209371_1001588 3300027312 Bacteria 14807
92 Ga0207428_10008192 3300027907 Bacteria 9454
93 Ga0268266_10358407 3300028379 Bacteria 1372
94 Ga0268266_10429563 3300028379 Bacteria 1253
95 Ga0268265_10034316 3300028380 Bacteria 3697
96 Ga0307517_10098888 3300028786 Bacteria 2318
97 Ga0268256_1001370 3300030500 Bacteria 14807
98 Ga0307512_10035923 3300030522 Bacteria 4213
99 Ga0307513_10005929 3300031456 Bacteria 16036
100 Ga0307408_100012250 3300031548 Bacteria 5677
101 Ga0307508_10142992 3300031616 Bacteria 1996
102 Ga0307514_10007949 3300031649 Bacteria 9092
103 Ga0307516_10020372 3300031730 Bacteria 6851
104 Ga0307518_10001376 3300031838 Bacteria 18082
105 Ga0307412_10066503 3300031911 Bacteria 2443
106 Ga0307409_100022226 3300031995 Bacteria 4368
107 Ga0307414_10002087 3300032004 Bacteria 10400
108 Ga0307414_10003528 3300032004 Bacteria 8366
109 Ga0307414_10352453 3300032004 Bacteria 1264
110 Ga0307411_10077616 3300032005 Bacteria 2274
111 Ga0307507_10000003 3300033179 Bacteria 371707
112 Ga0307507_10037411 3300033179 Bacteria 4939
113 Ga0307507_10096294 3300033179 Bacteria 2504
114 Ga0373942_0000036 3300035207 Bacteria 25374
115 Ga0395905_0256800 3300037471 Bacteria 1632
116 Ga0395905_0453369 3300037471 Bacteria 1181
117 Ga0400490_07647 3300038726 Bacteria 4466
118 Ga0439449_0004867 3300042007 Bacteria 5174
119 Ga0450902_001194 3300042137 Bacteria 3485
120 Ga0450903_006668 3300042138 Bacteria 1912
121 Ga0451577_0216816 3300042876 Bacteria 1729
122 Ga0495617_000642 3300046452 Bacteria 17510
123 Ga0495591_003293 3300046458 Bacteria 8451
124 Ga0495638_0001071 3300046460 Bacteria 26689
125 Ga0495638_0011558 3300046460 Bacteria 6082
126 Ga0495650_0014563 3300046471 Bacteria 4083
127 Ga0495605_0001816 3300046474 Bacteria 13661
128 Ga0495605_0008740 3300046474 Bacteria 5718
129 Ga0495584_0013427 3300046491 Bacteria 4182
130 Ga0495584_0078167 3300046491 Bacteria 1665
131 Ga0495607_0001489 3300046501 Bacteria 20785
132 Ga0495607_0027879 3300046501 Bacteria 3487
133 Ga0495606_0009409 3300046507 Bacteria 8272
134 Ga0495610_0019495 3300046512 Bacteria 3793
135 Ga0495620_0000035 3300046515 Bacteria 115562
136 Ga0495620_0034692 3300046515 Bacteria 2276
137 Ga0495628_0042190 3300046516 Bacteria 3640
138 Ga0495631_0001230 3300046518 Bacteria 15793
139 Ga0495632_0003288 3300046519 Bacteria 11546
140 Ga0495637_0001685 3300046520 Bacteria 12767
141 Ga0495666_0000092 3300046526 Bacteria 36757
142 Ga0495654_0001139 3300046530 Bacteria 19069
143 Ga0495611_0016215 3300046648 Bacteria 3185
144 Ga0495625_0010005 3300046660 Bacteria 7889
145 Ga0495625_0154884 3300046660 Bacteria 1538
146 Ga0495661_0132726 3300046665 Bacteria 1362
147 Ga0495671_0001307 3300046692 Bacteria 16973
148 Ga0495671_0005199 3300046692 Bacteria 7654
149 Ga0495649_0000083 3300046694 Bacteria 81883
150 Ga0495589_0150131 3300046794 Bacteria 1113
151 Ga0495660_0000454 3300046810 Bacteria 34113
152 Ga0495660_0000994 3300046810 Bacteria 20681
153 Ga0495660_0031159 3300046810 Bacteria 3000
154 Ga0495660_0222333 3300046810 Bacteria 889
155 Ga0495636_0104135 3300047318 Bacteria 1243
156 Ga0495680_0001350 3300047322 Bacteria 26630
157 Ga0495680_0041289 3300047322 Bacteria 3670
158 Ga0495683_0000416 3300047323 Bacteria 34093
159 Ga0495687_000495 3300047443 Bacteria 47456
160 Ga0495687_000845 3300047443 Bacteria 32633
161 Ga0495685_033869 3300047447 Bacteria 1755
162 Ga0495681_0002814 3300047470 Bacteria 12305
163 Ga0495681_0004705 3300047470 Bacteria 9254
164 Ga0495626_0005636 3300048091 Bacteria 7253
165 Ga0496110_0519696 3300048913 Bacteria 1083
166 Ga0496112_0521280 3300048915 Bacteria 1123
167 Ga0496116_0000014 3300048919 Bacteria 569049
168 Ga0496117_0150349 3300048920 Bacteria 1379
169 Ga0496118_0190641 3300048921 Bacteria 1226
170 Ga0496119_0000346 3300048922 Bacteria 65007
171 Ga0496122_0163585 3300048925 Bacteria 1353
172 Ga0496125_0000122 3300048928 Bacteria 174898
173 Ga0496125_0001860 3300048928 Bacteria 29047
174 Ga0496126_0005532 3300048929 Bacteria 14380
175 Ga0496126_0050572 3300048929 Bacteria 3786
176 Ga0496126_0329830 3300048929 Bacteria 1252
177 Ga0501037_0101543 3300049573 Bacteria 2076
178 Ga0501241_000061 3300049758 Bacteria 27062
179 Ga0501269_006896 3300049766 Bacteria 1371
180 Ga0501035_0021916 3300049822 Bacteria 5870
181 Ga0501044_0238043 3300049823 Bacteria 1765
182 Ga0501045_0379263 3300049824 Bacteria 1053
183 nmdc:mga03683_6451_c2 3300050489 Bacteria 3079
184 nmdc:mga03n38_3680_c1 3300050490 Bacteria 4958
185 nmdc:mga0yw44_22498_c2 3300050492 Bacteria 2456
186 nmdc:mga0k408_3752_c1 3300050493 Bacteria 8057
187 nmdc:mga07m45_1348_c1 3300050496 Bacteria 11186
188 nmdc:mga07m45_28203_c2 3300050496 Bacteria 1555
189 nmdc:mga06r32_110438_c1 3300050510 Bacteria 2705
190 Ga0495601_0000136 3300053077 Bacteria 41775
191 Ga0495619_0016846 3300053085 Bacteria 4628
192 Ga0500644_0026413 3300053088 Bacteria 1797
193 Ga0500568_0000333 3300053139 Bacteria 37191
194 Ga0500622_0142643 3300053156 Bacteria 1141
195 Ga0500636_0149913 3300053177 Bacteria 1282
196 2508676502 2508501039 Bacteria 9978592
197 2517763274 2517572101 Bacteria 6884336
198 2524441155 2524023205 Bacteria 8918781
199 2555257442 2554235234 Bacteria 5762085
200 2599408943 2599185169 Bacteria 5441380
201 2601522540 2600255254 Bacteria 5281859
202 2601527567 2600255255 Bacteria 5282785
203 2601614398 2600255280 Bacteria 5292309
204 2601619118 2600255281 Bacteria 5288753
205 2601642262 2600255287 Bacteria 5210468
206 2601647124 2600255288 Bacteria 5282738
207 2601652545 2600255289 Bacteria 5281907
208 2601657871 2600255290 Bacteria 5282218
209 2601662085 2600255291 Bacteria 5217298
210 2601695043 2600255298 Bacteria 5215185
211 2601699715 2600255299 Bacteria 5218662
212 2601706390 2600255300 Bacteria 5287774
213 2601710696 2600255301 Bacteria 5280532
214 2601715710 2600255302 Bacteria 5288235
215 2601720066 2600255303 Bacteria 5219315
216 2601726116 2600255304 Bacteria 5283973
217 2601730657 2600255305 Bacteria 5282329
218 2601735673 2600255306 Bacteria 5281613
219 2601740941 2600255307 Bacteria 5439064
220 2601750871 2600255309 Bacteria 5431045
221 2602018125 2600255392 Bacteria 5437392
222 2603659447 2602042052 Bacteria 5215873
223 2603664722 2602042053 Bacteria 5214361
224 2603838049 2602042103 Bacteria 5284714
225 2603843127 2602042104 Bacteria 5281639
226 2603848200 2602042105 Bacteria 5282303
227 2603853275 2602042106 Bacteria 5282744
228 2603871326 2602042110 Bacteria 5283285
229 2603876257 2602042111 Bacteria 5212080
230 2606048519 2603880178 Bacteria 5283018
231 2606069149 2603880184 Bacteria 5217896
232 2606144971 2603880202 Bacteria 5284684
233 2606175920 2603880211 Bacteria 5284226
234 2616900592 2616644941 Bacteria 8510691
235 2623500934 2622736605 Bacteria 4992138
236 2637224818 2636415599 Bacteria 5718434
237 2676200596 2675902999 Bacteria 9438463
238 2676406083 2675903046 Bacteria 5451247
239 2689956913 2687453737 Bacteria 11203906
240 2774845174 2773857921 Bacteria 9435764
241 2777022157 2775507074 Bacteria 5532402
242 2832008456 2832004796 Bacteria 6538017
243 2866065885 2866065130 Bacteria 6518152
244 2867347021 2867346516 Bacteria 7608576
245 2867480068 2867475112 Bacteria 6909112
246 2884088632 2884086401 Bacteria 5005459
247 2885384748 2885383462 Bacteria 9473874
248 2891052134 2891048133 Bacteria 4447501
249 2904514294 2904513164 Bacteria 5476410
250 2919108638 2919108558 Bacteria 5897419
251 2929217853 2929212328 Bacteria 7708288
252 2939575009 2939573065 Bacteria 4926053
253 2969081798 2969079654 Bacteria 5439582
254 2971823206 2971820967 Bacteria 5823634
255 2984564223 2984559226 Bacteria 5683096
256 2984596958 2984595703 Bacteria 5682994
257 3000379100 3000376612 Bacteria 4705565
258 3003002586 3002998708 Bacteria 11715108
259 8002395203 8002392321 Bacteria 4159911
260 8002780190 8002775197 Bacteria 10728764
261 8002787279 8002784119 Bacteria 9788632
262 8047712812 8047710418 Bacteria 11023148
263 8056174153 8056172158 Bacteria 6133900
264 Ga0105237_10004282
265 JGI24740J21852_10004751
266 JGI24737J22298_10013837
267 Ga0065714_10002976
268 Ga0070668_100007219
269 Ga0070668_100028499
270 Ga0070667_100588985
271 Ga0070663_100134254
272 Ga0070665_100515449
273 Ga0068855_100075997
274 Ga0068855_100392731
275 Ga0068857_100119667
276 Ga0068854_100002662
277 Ga0068854_100010954
278 Ga0068856_100094146
279 Ga0068856_100215492
280 Ga0068852_100472675
281 Ga0068851_10015819
282 Ga0068862_100023060
283 Ga0081539_10001862
284 Ga0075365_10073428
285 Ga0075363_100005488
286 Ga0075364_10349147
287 Ga0075362_10011624
288 Ga0075366_10002546
289 Ga0075370_10001354
290 Ga0075370_10053610
291 Ga0075428_100010294
292 Ga0075430_100149554
293 Ga0075431_100002104
294 Ga0075431_100058000
295 Ga0079104_1002857
296 Ga0099826_10011905
297 Ga0099795_10003508
298 Ga0099795_10077385
299 Ga0105251_10000064
300 Ga0105251_10000105
301 Ga0105251_10077297
302 Ga0105244_10001542
303 Ga0105250_10000052
304 Ga0105250_10000053
305 Ga0105243_10098060
306 Ga0105241_10125211
307 Ga0105237_10001013
308 Ga0105237_10207210
309 Ga0105238_10000514
310 Ga0099796_10033737
311 Ga0105239_10000626
312 Ga0105239_10001157
313 Ga0105239_10011168
314 Ga0105239_10040307
315 Ga0157326_1001009
316 Ga0163161_10000201
317 Ga0163161_10002299
318 Ga0163161_10013990
319 Ga0209257_1002136
320 Ga0207656_10010781
321 Ga0207696_1000003
322 Ga0207696_1000116
323 Ga0207655_1024638
324 Ga0207713_1000002
325 Ga0207713_1000003
326 Ga0207647_10001831
327 Ga0207654_10000069
328 Ga0207695_10008866
329 Ga0207671_10010953
330 Ga0207671_10012389
331 Ga0207671_10076323
332 Ga0207671_10415981
333 Ga0207694_10000120
334 Ga0207700_10338238
335 Ga0207709_10068305
336 Ga0207691_10173864
337 Ga0207679_10623343
338 Ga0207667_10041854
339 Ga0207667_10050218
340 Ga0207667_10276599
341 Ga0207668_10020829
342 Ga0207640_10102318
343 Ga0207639_10013881
344 Ga0207639_10079987
345 Ga0207678_10075496
346 Ga0207702_10000019
347 Ga0207648_10818663
348 Ga0207674_10007903
349 Ga0207674_10113876
350 Ga0207675_100009534
351 Ga0207698_10168147
352 Ga0207698_10374629
353 Ga0209281_1006100
354 Ga0209371_1001588
355 Ga0207428_10008192
356 Ga0268266_10358407
357 Ga0268266_10429563
358 Ga0268265_10034316
359 Ga0307517_10098888
360 Ga0268256_1001370
361 Ga0307512_10035923
362 Ga0307513_10005929
363 Ga0307408_100012250
364 Ga0307508_10142992
365 Ga0307514_10007949
366 Ga0307516_10020372
367 Ga0307518_10001376
368 Ga0307412_10066503
369 Ga0307409_100022226
370 Ga0307414_10002087
371 Ga0307414_10003528
372 Ga0307414_10352453
373 Ga0307411_10077616
374 Ga0307507_10000003
375 Ga0307507_10037411
376 Ga0307507_10096294
377 Ga0373942_0000036
378 Ga0395905_0256800
379 Ga0395905_0453369
380 Ga0400490_07647
381 Ga0439449_0004867
382 Ga0450902_001194
383 Ga0450903_006668
384 Ga0451577_0216816
385 Ga0495617_000642
386 Ga0495591_003293
387 Ga0495638_0001071
388 Ga0495638_0011558
389 Ga0495650_0014563
390 Ga0495605_0001816
391 Ga0495605_0008740
392 Ga0495584_0013427
393 Ga0495584_0078167
394 Ga0495607_0001489
395 Ga0495607_0027879
396 Ga0495606_0009409
397 Ga0495610_0019495
398 Ga0495620_0000035
399 Ga0495620_0034692
400 Ga0495628_0042190
401 Ga0495631_0001230
402 Ga0495632_0003288
403 Ga0495637_0001685
404 Ga0495666_0000092
405 Ga0495654_0001139
406 Ga0495611_0016215
407 Ga0495625_0010005
408 Ga0495625_0154884
409 Ga0495661_0132726
410 Ga0495671_0001307
411 Ga0495671_0005199
412 Ga0495649_0000083
413 Ga0495589_0150131
414 Ga0495660_0000454
415 Ga0495660_0000994
416 Ga0495660_0031159
417 Ga0495660_0222333
418 Ga0495636_0104135
419 Ga0495680_0001350
420 Ga0495680_0041289
421 Ga0495683_0000416
422 Ga0495687_000495
423 Ga0495687_000845
424 Ga0495685_033869
425 Ga0495681_0002814
426 Ga0495681_0004705
427 Ga0495626_0005636
428 Ga0496110_0519696
429 Ga0496112_0521280
430 Ga0496116_0000014
431 Ga0496117_0150349
432 Ga0496118_0190641
433 Ga0496119_0000346
434 Ga0496122_0163585
435 Ga0496125_0000122
436 Ga0496125_0001860
437 Ga0496126_0005532
438 Ga0496126_0050572
439 Ga0496126_0329830
440 Ga0501037_0101543
441 Ga0501241_000061
442 Ga0501269_006896
443 Ga0501035_0021916
444 Ga0501044_0238043
445 Ga0501045_0379263
446 nmdc:mga03683_6451_c2
447 nmdc:mga03n38_3680_c1
448 nmdc:mga0yw44_22498_c2
449 nmdc:mga0k408_3752_c1
450 nmdc:mga07m45_1348_c1
451 nmdc:mga07m45_28203_c2
452 nmdc:mga06r32_110438_c1
453 Ga0495601_0000136
454 Ga0495619_0016846
455 Ga0500644_0026413
456 Ga0500568_0000333
457 Ga0500622_0142643
458 Ga0500636_0149913
459 2508676502
460 2517763274
461 2524441155
462 2555257442
463 2599408943
464 2601522540
465 2601527567
466 2601614398
467 2601619118
468 2601642262
469 2601647124
470 2601652545
471 2601657871
472 2601662085
473 2601695043
474 2601699715
475 2601706390
476 2601710696
477 2601715710
478 2601720066
479 2601726116
480 2601730657
481 2601735673
482 2601740941
483 2601750871
484 2602018125
485 2603659447
486 2603664722
487 2603838049
488 2603843127
489 2603848200
490 2603853275
491 2603871326
492 2603876257
493 2606048519
494 2606069149
495 2606144971
496 2606175920
497 2616900592
498 2623500934
499 2637224818
500 2676200596
501 2676406083
502 2689956913
503 2774845174
504 2777022157
505 2832008456
506 2866065885
507 2867347021
508 2867480068
509 2884088632
510 2885384748
511 2891052134
512 2904514294
513 2919108638
514 2929217853
515 2939575009
516 2969081798
517 2971823206
518 2984564223
519 2984596958
520 3000379100
521 3003002586
522 8002395203
523 8002780190
524 8002787279
525 8047712812
526 8056174153

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

75

278

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2wqt-assembly1.cif.gz_A dodecahedral assembly of mhpd 0.9888 10 264
2wqt-assembly1.cif.gz_A dodecahedral assembly of mhpd 0.9589 10 264
2eb6-assembly1.cif.gz_D-2 crystal structure of hpcg complexed with mg ion 0.9562 9 264
2eb5-assembly1.cif.gz_A crystal structure of hpcg complexed with oxalate 0.9509 10 264
2eb5-assembly1.cif.gz_E-2 crystal structure of hpcg complexed with oxalate 0.9503 9 264
ID Description Score Start End Superfamily
2wqtB00 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9888 10 264 3.90.850.10
af_I6XHH5_1_260_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9749 7 263 3.90.850.10
af_I6XHH5_1_260_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9602 7 263 3.90.850.10
2wqtB00 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9589 10 264 3.90.850.10
2eb4C00 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9425 9 264 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A3R9WK35-F1-model_v4 deleted 1.002 182 264
AF-A0A352S8G5-F1-model_v4 2-keto-4-pentenoate hydratase 0.9977 180 263 GO:0005737
GO:0008684
AF-A0A6D0F1W8-F1-model_v4 deleted 0.9939 171 264
AF-A0A4V2HUX8-F1-model_v4 2-keto-4-pentenoate hydratase 0.9934 9 264 GO:0005737
GO:0008684
AF-A0A1I5Y7D7-F1-model_v4 2-keto-4-pentenoate hydratase (EC 4.2.1.80) (2-hydroxypentadienoic acid hydratase) 0.9912 10 264 GO:0005737
GO:0008684
GO:0019380
GO:0030145

Map