F371158

General Info

Members Datasets Scaffolds Average Seq Length
262 160 524 302

Family's Representative Sequence

Representative Sequence 3300025949|Ga0207667_10201593|Ga0207667_102015933
Length 356
Sequence MYRMFASIVPLIDFVLRQLMFPCRYDPFPTGRLGKTMFLVSICRRGIVGSTVELRHLRYFVAVAEAENVLRAATQKLHVSQPAVSRQIRDLEDELGVQLFERTGKAVSLTDAGRVFLREARMVLERTDEAVKNVRAFVQTGETELHVGYSPLPGAQLMPAALRAFQQAMPKVHVRLHDWSSEQIAVGLREGRLKVGLVARPLKRGAFGDFRFEELLREHIRLAVPPDHSFAQRRSVSLADAAQQPFVGLTREDFPDYHGYLATLFAPVKNKPRVIEEHESLTSVVAAVEAGTGVAVAVEGLGYTFGNRVKLVRLTPEPKPLSFGIAARKGRLSPATEKFWQCAKDAAASIGVFPKK

Samples

Sample ID Description Type Environment
1 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
19 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
24 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
25 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
52 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
66 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
67 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300025271 Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
112 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
116 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
117 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
118 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
119 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
126 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
127 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
128 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
129 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
130 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
131 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
132 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
133 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
134 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
135 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
136 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
137 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
138 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
139 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
149 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
150 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
158 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
159 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
160 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.15
Nodule 0
Rhizoplane 6.49
Rhizosphere 90.84
Stem 0
Stem Tuber 0
Unclassified 11.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207667_10201593 3300025949 Bacteria 2041
2 SwRhRL2b_contig_3117671 2162886007 Unclassified 2078
3 Ga0065704_10090702 3300005289 Bacteria 2769
4 Ga0065712_10010677 3300005290 Bacteria 2419
5 Ga0065712_10134420 3300005290 Bacteria 1510
6 Ga0065715_10005576 3300005293 Bacteria 3136
7 Ga0065715_10026211 3300005293 Bacteria 1992
8 Ga0065715_10105464 3300005293 Bacteria 2891
9 Ga0065715_10129532 3300005293 Bacteria 2043
10 Ga0065715_10199876 3300005293 Bacteria 1366
11 Ga0065707_10121556 3300005295 Bacteria 2082
12 Ga0065707_10168109 3300005295 Unclassified 1506
13 Ga0070658_10121546 3300005327 Bacteria 2170
14 Ga0070676_10051599 3300005328 Unclassified 2416
15 Ga0070670_100052007 3300005331 Bacteria 3518
16 Ga0070670_100220140 3300005331 Bacteria 1651
17 Ga0068868_100087926 3300005338 Unclassified 2500
18 Ga0070660_100104341 3300005339 Bacteria 2249
19 Ga0070689_100068426 3300005340 Unclassified 2770
20 Ga0070668_100021579 3300005347 Bacteria 4865
21 Ga0070668_100035048 3300005347 Bacteria 3825
22 Ga0070668_100047342 3300005347 Bacteria 3306
23 Ga0070669_100008068 3300005353 Bacteria 7521
24 Ga0070669_100046574 3300005353 Bacteria 3162
25 Ga0070669_100348367 3300005353 Unclassified 1202
26 Ga0070675_100004502 3300005354 Bacteria 10643
27 Ga0070671_100018382 3300005355 Bacteria 5677
28 Ga0070671_100110969 3300005355 Bacteria 2304
29 Ga0070671_100292455 3300005355 Bacteria 1386
30 Ga0070674_100020112 3300005356 Bacteria 4257
31 Ga0070674_100163793 3300005356 Bacteria 1689
32 Ga0070673_100026796 3300005364 Bacteria 4262
33 Ga0070688_100003308 3300005365 Bacteria 8264
34 Ga0070659_100095935 3300005366 Bacteria 2382
35 Ga0070667_100107545 3300005367 Bacteria 2415
36 Ga0070667_100116147 3300005367 Unclassified 2324
37 Ga0070709_10012036 3300005434 Bacteria 4837
38 Ga0070709_10235729 3300005434 Bacteria 1312
39 Ga0070713_100087640 3300005436 Bacteria 2670
40 Ga0070713_100131124 3300005436 Bacteria 2210
41 Ga0070710_10109336 3300005437 Bacteria 1658
42 Ga0070710_10125867 3300005437 Bacteria 1557
43 Ga0070710_10279043 3300005437 Bacteria 1083
44 Ga0070710_10298075 3300005437 Bacteria 1051
45 Ga0070711_100231616 3300005439 Bacteria 1440
46 Ga0070705_100067651 3300005440 Bacteria 2147
47 Ga0070705_100273405 3300005440 Bacteria 1197
48 Ga0070708_100054788 3300005445 Bacteria 3544
49 Ga0070708_100129949 3300005445 Bacteria 2330
50 Ga0070708_100153648 3300005445 Bacteria 2141
51 Ga0070708_100184177 3300005445 Bacteria 1952
52 Ga0070678_100015780 3300005456 Bacteria 4810
53 Ga0070678_100165626 3300005456 Bacteria 1795
54 Ga0070662_100040922 3300005457 Bacteria 3303
55 Ga0068867_100245243 3300005459 Bacteria 1454
56 Ga0070706_100015533 3300005467 Bacteria 7033
57 Ga0070706_100031383 3300005467 Bacteria 4900
58 Ga0070706_100064563 3300005467 Bacteria 3384
59 Ga0070706_100124398 3300005467 Bacteria 2404
60 Ga0070706_100138137 3300005467 Unclassified 2274
61 Ga0070706_100318156 3300005467 Bacteria 1451
62 Ga0070707_100025054 3300005468 Bacteria 5658
63 Ga0070707_100073231 3300005468 Bacteria 3302
64 Ga0070707_100075036 3300005468 Bacteria 3261
65 Ga0070707_100183782 3300005468 Unclassified 2038
66 Ga0070698_100013508 3300005471 Bacteria 8643
67 Ga0070698_100016559 3300005471 Bacteria 7779
68 Ga0070698_100025944 3300005471 Bacteria 6104
69 Ga0070698_100030563 3300005471 Bacteria 5584
70 Ga0070698_100082178 3300005471 Bacteria 3214
71 Ga0070698_100091174 3300005471 Unclassified 3030
72 Ga0070699_100248055 3300005518 Bacteria 1590
73 Ga0070697_100047444 3300005536 Bacteria 3482
74 Ga0070697_100082602 3300005536 Bacteria 2648
75 Ga0070697_100101997 3300005536 Bacteria 2384
76 Ga0070697_100189201 3300005536 Bacteria 1746
77 Ga0070697_100515825 3300005536 Unclassified 1046
78 Ga0070672_100012925 3300005543 Bacteria 5883
79 Ga0070672_100033162 3300005543 Bacteria 3908
80 Ga0070665_100025308 3300005548 Bacteria 5980
81 Ga0070665_100137632 3300005548 Bacteria 2445
82 Ga0070665_100425962 3300005548 Bacteria 1336
83 Ga0070664_100120948 3300005564 Unclassified 2292
84 Ga0068857_100036340 3300005577 Bacteria 4364
85 Ga0068856_100000211 3300005614 Bacteria 63015
86 Ga0068856_100129113 3300005614 Bacteria 2532
87 Ga0068863_100425665 3300005841 Bacteria 1301
88 Ga0070717_10000051 3300006028 Bacteria 100477
89 Ga0070717_10101904 3300006028 Bacteria 2438
90 Ga0070717_10124655 3300006028 Bacteria 2210
91 Ga0070717_10283610 3300006028 Bacteria 1469
92 Ga0070715_10085063 3300006163 Bacteria 1444
93 Ga0070715_10148507 3300006163 Bacteria 1146
94 Ga0070716_100043437 3300006173 Bacteria 2513
95 Ga0070716_100224668 3300006173 Bacteria 1264
96 Ga0070712_100009297 3300006175 Bacteria 6194
97 Ga0070712_100054092 3300006175 Bacteria 2805
98 Ga0070712_100078027 3300006175 Bacteria 2389
99 Ga0070712_100149362 3300006175 Bacteria 1792
100 Ga0068871_100106897 3300006358 Unclassified 2349
101 Ga0075428_100601847 3300006844 Bacteria 1174
102 Ga0075434_100212589 3300006871 Bacteria 1954
103 Ga0068865_100034290 3300006881 Bacteria 3404
104 Ga0075436_100051557 3300006914 Unclassified 2840
105 Ga0099794_10196519 3300007265 Unclassified 1032
106 Ga0099795_10093667 3300007788 Bacteria 1168
107 Ga0111539_10821352 3300009094 Bacteria 1082
108 Ga0105245_10140273 3300009098 Bacteria 2276
109 Ga0114129_10429285 3300009147 Bacteria 1736
110 Ga0105243_10111414 3300009148 Bacteria 2291
111 Ga0105237_10023464 3300009545 Bacteria 6321
112 Ga0105238_10136242 3300009551 Bacteria 2433
113 Ga0099796_10013312 3300010159 Bacteria 2346
114 Ga0099796_10052617 3300010159 Bacteria 1418
115 Ga0105239_10240677 3300010375 Bacteria 2031
116 Ga0105239_10469516 3300010375 Unclassified 1429
117 Ga0157371_10213472 3300013102 Bacteria 1385
118 Ga0157374_10002539 3300013296 Bacteria 15393
119 Ga0157374_10225582 3300013296 Bacteria 1840
120 Ga0157374_10452286 3300013296 Bacteria 1286
121 Ga0157378_10067102 3300013297 Bacteria 3214
122 Ga0163162_10013282 3300013306 Bacteria 8043
123 Ga0163162_10231800 3300013306 Bacteria 1977
124 Ga0157372_10080830 3300013307 Bacteria 3678
125 Ga0157375_10015260 3300013308 Bacteria 6875
126 Ga0157375_10368288 3300013308 Bacteria 1603
127 Ga0163163_10083570 3300014325 Bacteria 3198
128 Ga0163163_10369010 3300014325 Bacteria 1492
129 Ga0157376_10026468 3300014969 Bacteria 4585
130 Ga0157376_10147194 3300014969 Unclassified 2120
131 Ga0163161_10014927 3300017792 Bacteria 5410
132 Ga0213876_10004994 3300021384 Bacteria 7324
133 Ga0207666_1003475 3300025271 Bacteria 1939
134 Ga0207666_1015909 3300025271 Bacteria 1075
135 Ga0207697_10000870 3300025315 Bacteria 17104
136 Ga0207697_10002345 3300025315 Bacteria 9863
137 Ga0207697_10012924 3300025315 Bacteria 3490
138 Ga0207653_10089344 3300025885 Bacteria 1077
139 Ga0207692_10045857 3300025898 Bacteria 2189
140 Ga0207692_10128268 3300025898 Bacteria 1429
141 Ga0207692_10128970 3300025898 Unclassified 1426
142 Ga0207692_10277110 3300025898 Bacteria 1013
143 Ga0207688_10033815 3300025901 Bacteria 2829
144 Ga0207680_10028902 3300025903 Bacteria 3107
145 Ga0207685_10135470 3300025905 Bacteria 1098
146 Ga0207699_10204995 3300025906 Bacteria 1338
147 Ga0207645_10004999 3300025907 Bacteria 9714
148 Ga0207645_10017761 3300025907 Bacteria 4689
149 Ga0207645_10053819 3300025907 Bacteria 2571
150 Ga0207705_10104882 3300025909 Bacteria 2083
151 Ga0207684_10008108 3300025910 Bacteria 9364
152 Ga0207684_10010577 3300025910 Bacteria 8109
153 Ga0207684_10059020 3300025910 Bacteria 3257
154 Ga0207684_10066343 3300025910 Bacteria 3065
155 Ga0207684_10077945 3300025910 Bacteria 2818
156 Ga0207671_10014117 3300025914 Bacteria 6327
157 Ga0207693_10007496 3300025915 Bacteria 8966
158 Ga0207693_10038205 3300025915 Bacteria 3781
159 Ga0207693_10183625 3300025915 Unclassified 1646
160 Ga0207693_10203843 3300025915 Bacteria 1555
161 Ga0207663_10077421 3300025916 Unclassified 2165
162 Ga0207662_10058182 3300025918 Bacteria 2313
163 Ga0207657_10203652 3300025919 Bacteria 1591
164 Ga0207646_10019201 3300025922 Bacteria 6355
165 Ga0207646_10028594 3300025922 Bacteria 5072
166 Ga0207646_10032795 3300025922 Bacteria 4698
167 Ga0207646_10149710 3300025922 Bacteria 2104
168 Ga0207646_10162041 3300025922 Bacteria 2018
169 Ga0207681_10015334 3300025923 Bacteria 4779
170 Ga0207681_10159303 3300025923 Bacteria 1699
171 Ga0207659_10230818 3300025926 Bacteria 1492
172 Ga0207700_10168651 3300025928 Bacteria 1824
173 Ga0207644_10049950 3300025931 Bacteria 2996
174 Ga0207690_10116777 3300025932 Unclassified 1931
175 Ga0207706_10028690 3300025933 Bacteria 4967
176 Ga0207670_10072743 3300025936 Bacteria 2381
177 Ga0207669_10110080 3300025937 Unclassified 1843
178 Ga0207665_10006436 3300025939 Bacteria 7791
179 Ga0207665_10074649 3300025939 Bacteria 2321
180 Ga0207665_10223728 3300025939 Bacteria 1380
181 Ga0207691_10002480 3300025940 Bacteria 18050
182 Ga0207691_10015091 3300025940 Bacteria 7350
183 Ga0207689_10029457 3300025942 Bacteria 4584
184 Ga0207679_10222012 3300025945 Unclassified 1590
185 Ga0207667_10054738 3300025949 Bacteria 4196
186 Ga0207651_10150156 3300025960 Bacteria 1812
187 Ga0207668_10210868 3300025972 Unclassified 1553
188 Ga0207658_10033066 3300025986 Bacteria 3686
189 Ga0207658_10072865 3300025986 Bacteria 2605
190 Ga0207702_10001647 3300026078 Bacteria 22041
191 Ga0207702_10088884 3300026078 Bacteria 2701
192 Ga0207648_10032356 3300026089 Bacteria 4618
193 Ga0207648_10177465 3300026089 Bacteria 1884
194 Ga0207674_10049047 3300026116 Bacteria 4320
195 Ga0207683_10011111 3300026121 Bacteria 7672
196 Ga0207683_10212533 3300026121 Bacteria 1761
197 Ga0207683_10422965 3300026121 Bacteria 1227
198 Ga0209179_1001671 3300027512 Bacteria 2804
199 Ga0268266_10146884 3300028379 Bacteria 2121
200 Ga0268265_10134878 3300028380 Bacteria 2058
201 Ga0268264_10509606 3300028381 Unclassified 1175
202 Ga0307509_10355363 3300031507 Bacteria 1187
203 Ga0373931_0072517 3300035691 Bacteria 1883
204 Ga0373925_0310128 3300037068 Bacteria 1275
205 Ga0436364_1325457 3300037853 Bacteria 3473
206 Ga0436365_0722651 3300039437 Bacteria 39746
207 Ga0436360_1036691 3300039438 Bacteria 4204
208 Ga0436361_0385985 3300039447 Bacteria 1578
209 Ga0453684_0001627 3300044712 Bacteria 61330
210 Ga0451576_0041978 3300045051 Bacteria 4831
211 Ga0451576_0603909 3300045051 Unclassified 1153
212 Ga0495582_0022049 3300046473 Bacteria 3483
213 Ga0495639_0091854 3300046475 Bacteria 1425
214 Ga0495608_0092762 3300046511 Bacteria 1951
215 Ga0495618_0055897 3300046514 Bacteria 2499
216 Ga0495630_0000131 3300046517 Bacteria 59509
217 Ga0495643_0000412 3300046522 Bacteria 56093
218 Ga0495666_0029329 3300046526 Bacteria 2706
219 Ga0495666_0054690 3300046526 Bacteria 1914
220 Ga0495665_0198260 3300046531 Bacteria 1041
221 Ga0495640_0122381 3300046533 Bacteria 1690
222 Ga0495586_0000031 3300046535 Bacteria 96104
223 Ga0495586_0004945 3300046535 Bacteria 7127
224 Ga0495645_0087351 3300046543 Bacteria 2231
225 Ga0495634_0142529 3300046642 Bacteria 1520
226 Ga0495657_0050154 3300046675 Bacteria 2807
227 Ga0495599_0128912 3300046678 Bacteria 1571
228 Ga0495647_0013159 3300046681 Bacteria 2862
229 Ga0495658_0005530 3300046683 Bacteria 6210
230 Ga0495613_0002716 3300046689 Bacteria 13281
231 Ga0495613_0043363 3300046689 Bacteria 3328
232 Ga0495581_0160407 3300047315 Bacteria 1314
233 Ga0495674_0000197 3300047319 Bacteria 48664
234 Ga0495676_0010252 3300047321 Bacteria 8503
235 Ga0495676_0187377 3300047321 Unclassified 1445
236 Ga0495686_0256739 3300047472 Bacteria 980
237 Ga0496100_0027349 3300048903 Bacteria 3507
238 Ga0496101_0199210 3300048904 Bacteria 1547
239 Ga0496102_0089583 3300048905 Bacteria 2846
240 Ga0496103_0048301 3300048906 Bacteria 2630
241 Ga0496107_0064596 3300048910 Bacteria 2653
242 Ga0496108_0338004 3300048911 Bacteria 1314
243 Ga0496108_0450281 3300048911 Bacteria 1125
244 Ga0496109_0031738 3300048912 Bacteria 4743
245 Ga0496109_0256555 3300048912 Bacteria 1647
246 Ga0496109_0418714 3300048912 Bacteria 1265
247 Ga0496111_0181673 3300048914 Bacteria 1564
248 Ga0496111_0373461 3300048914 Bacteria 1055
249 Ga0496112_0149005 3300048915 Bacteria 2307
250 Ga0496112_0184952 3300048915 Unclassified 2047
251 Ga0496113_0213530 3300048916 Bacteria 1536
252 Ga0496114_0130971 3300048917 Bacteria 2166
253 Ga0496115_0044517 3300048918 Bacteria 3540
254 Ga0501080_0066473 3300049742 Bacteria 3353
255 Ga0501035_0089197 3300049822 Bacteria 2716
256 Ga0501044_0184496 3300049823 Bacteria 2052
257 nmdc:mga08y16_205680_c1 3300050511 Bacteria 2039
258 nmdc:mga08y16_226496_c1 3300050511 Unclassified 1934
259 nmdc:mga0a205_291701_c1 3300050515 Bacteria 1505
260 Ga0500643_041733 3300053087 Unclassified 1346
261 Ga0500555_000024 3300053103 Bacteria 134279
262 Ga0500616_0022943 3300053153 Bacteria 3482
263 Ga0207667_10201593
264 SwRhRL2b_contig_3117671
265 Ga0065704_10090702
266 Ga0065712_10010677
267 Ga0065712_10134420
268 Ga0065715_10005576
269 Ga0065715_10026211
270 Ga0065715_10105464
271 Ga0065715_10129532
272 Ga0065715_10199876
273 Ga0065707_10121556
274 Ga0065707_10168109
275 Ga0070658_10121546
276 Ga0070676_10051599
277 Ga0070670_100052007
278 Ga0070670_100220140
279 Ga0068868_100087926
280 Ga0070660_100104341
281 Ga0070689_100068426
282 Ga0070668_100021579
283 Ga0070668_100035048
284 Ga0070668_100047342
285 Ga0070669_100008068
286 Ga0070669_100046574
287 Ga0070669_100348367
288 Ga0070675_100004502
289 Ga0070671_100018382
290 Ga0070671_100110969
291 Ga0070671_100292455
292 Ga0070674_100020112
293 Ga0070674_100163793
294 Ga0070673_100026796
295 Ga0070688_100003308
296 Ga0070659_100095935
297 Ga0070667_100107545
298 Ga0070667_100116147
299 Ga0070709_10012036
300 Ga0070709_10235729
301 Ga0070713_100087640
302 Ga0070713_100131124
303 Ga0070710_10109336
304 Ga0070710_10125867
305 Ga0070710_10279043
306 Ga0070710_10298075
307 Ga0070711_100231616
308 Ga0070705_100067651
309 Ga0070705_100273405
310 Ga0070708_100054788
311 Ga0070708_100129949
312 Ga0070708_100153648
313 Ga0070708_100184177
314 Ga0070678_100015780
315 Ga0070678_100165626
316 Ga0070662_100040922
317 Ga0068867_100245243
318 Ga0070706_100015533
319 Ga0070706_100031383
320 Ga0070706_100064563
321 Ga0070706_100124398
322 Ga0070706_100138137
323 Ga0070706_100318156
324 Ga0070707_100025054
325 Ga0070707_100073231
326 Ga0070707_100075036
327 Ga0070707_100183782
328 Ga0070698_100013508
329 Ga0070698_100016559
330 Ga0070698_100025944
331 Ga0070698_100030563
332 Ga0070698_100082178
333 Ga0070698_100091174
334 Ga0070699_100248055
335 Ga0070697_100047444
336 Ga0070697_100082602
337 Ga0070697_100101997
338 Ga0070697_100189201
339 Ga0070697_100515825
340 Ga0070672_100012925
341 Ga0070672_100033162
342 Ga0070665_100025308
343 Ga0070665_100137632
344 Ga0070665_100425962
345 Ga0070664_100120948
346 Ga0068857_100036340
347 Ga0068856_100000211
348 Ga0068856_100129113
349 Ga0068863_100425665
350 Ga0070717_10000051
351 Ga0070717_10101904
352 Ga0070717_10124655
353 Ga0070717_10283610
354 Ga0070715_10085063
355 Ga0070715_10148507
356 Ga0070716_100043437
357 Ga0070716_100224668
358 Ga0070712_100009297
359 Ga0070712_100054092
360 Ga0070712_100078027
361 Ga0070712_100149362
362 Ga0068871_100106897
363 Ga0075428_100601847
364 Ga0075434_100212589
365 Ga0068865_100034290
366 Ga0075436_100051557
367 Ga0099794_10196519
368 Ga0099795_10093667
369 Ga0111539_10821352
370 Ga0105245_10140273
371 Ga0114129_10429285
372 Ga0105243_10111414
373 Ga0105237_10023464
374 Ga0105238_10136242
375 Ga0099796_10013312
376 Ga0099796_10052617
377 Ga0105239_10240677
378 Ga0105239_10469516
379 Ga0157371_10213472
380 Ga0157374_10002539
381 Ga0157374_10225582
382 Ga0157374_10452286
383 Ga0157378_10067102
384 Ga0163162_10013282
385 Ga0163162_10231800
386 Ga0157372_10080830
387 Ga0157375_10015260
388 Ga0157375_10368288
389 Ga0163163_10083570
390 Ga0163163_10369010
391 Ga0157376_10026468
392 Ga0157376_10147194
393 Ga0163161_10014927
394 Ga0213876_10004994
395 Ga0207666_1003475
396 Ga0207666_1015909
397 Ga0207697_10000870
398 Ga0207697_10002345
399 Ga0207697_10012924
400 Ga0207653_10089344
401 Ga0207692_10045857
402 Ga0207692_10128268
403 Ga0207692_10128970
404 Ga0207692_10277110
405 Ga0207688_10033815
406 Ga0207680_10028902
407 Ga0207685_10135470
408 Ga0207699_10204995
409 Ga0207645_10004999
410 Ga0207645_10017761
411 Ga0207645_10053819
412 Ga0207705_10104882
413 Ga0207684_10008108
414 Ga0207684_10010577
415 Ga0207684_10059020
416 Ga0207684_10066343
417 Ga0207684_10077945
418 Ga0207671_10014117
419 Ga0207693_10007496
420 Ga0207693_10038205
421 Ga0207693_10183625
422 Ga0207693_10203843
423 Ga0207663_10077421
424 Ga0207662_10058182
425 Ga0207657_10203652
426 Ga0207646_10019201
427 Ga0207646_10028594
428 Ga0207646_10032795
429 Ga0207646_10149710
430 Ga0207646_10162041
431 Ga0207681_10015334
432 Ga0207681_10159303
433 Ga0207659_10230818
434 Ga0207700_10168651
435 Ga0207644_10049950
436 Ga0207690_10116777
437 Ga0207706_10028690
438 Ga0207670_10072743
439 Ga0207669_10110080
440 Ga0207665_10006436
441 Ga0207665_10074649
442 Ga0207665_10223728
443 Ga0207691_10002480
444 Ga0207691_10015091
445 Ga0207689_10029457
446 Ga0207679_10222012
447 Ga0207667_10054738
448 Ga0207651_10150156
449 Ga0207668_10210868
450 Ga0207658_10033066
451 Ga0207658_10072865
452 Ga0207702_10001647
453 Ga0207702_10088884
454 Ga0207648_10032356
455 Ga0207648_10177465
456 Ga0207674_10049047
457 Ga0207683_10011111
458 Ga0207683_10212533
459 Ga0207683_10422965
460 Ga0209179_1001671
461 Ga0268266_10146884
462 Ga0268265_10134878
463 Ga0268264_10509606
464 Ga0307509_10355363
465 Ga0373931_0072517
466 Ga0373925_0310128
467 Ga0436364_1325457
468 Ga0436365_0722651
469 Ga0436360_1036691
470 Ga0436361_0385985
471 Ga0453684_0001627
472 Ga0451576_0041978
473 Ga0451576_0603909
474 Ga0495582_0022049
475 Ga0495639_0091854
476 Ga0495608_0092762
477 Ga0495618_0055897
478 Ga0495630_0000131
479 Ga0495643_0000412
480 Ga0495666_0029329
481 Ga0495666_0054690
482 Ga0495665_0198260
483 Ga0495640_0122381
484 Ga0495586_0000031
485 Ga0495586_0004945
486 Ga0495645_0087351
487 Ga0495634_0142529
488 Ga0495657_0050154
489 Ga0495599_0128912
490 Ga0495647_0013159
491 Ga0495658_0005530
492 Ga0495613_0002716
493 Ga0495613_0043363
494 Ga0495581_0160407
495 Ga0495674_0000197
496 Ga0495676_0010252
497 Ga0495676_0187377
498 Ga0495686_0256739
499 Ga0496100_0027349
500 Ga0496101_0199210
501 Ga0496102_0089583
502 Ga0496103_0048301
503 Ga0496107_0064596
504 Ga0496108_0338004
505 Ga0496108_0450281
506 Ga0496109_0031738
507 Ga0496109_0256555
508 Ga0496109_0418714
509 Ga0496111_0181673
510 Ga0496111_0373461
511 Ga0496112_0149005
512 Ga0496112_0184952
513 Ga0496113_0213530
514 Ga0496114_0130971
515 Ga0496115_0044517
516 Ga0501080_0066473
517 Ga0501035_0089197
518 Ga0501044_0184496
519 nmdc:mga08y16_205680_c1
520 nmdc:mga08y16_226496_c1
521 nmdc:mga0a205_291701_c1
522 Ga0500643_041733
523 Ga0500555_000024
524 Ga0500616_0022943

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00126

HTH_1

Bacterial regulatory helix-turn-helix protein, lysR family

54

114

0.96

PF03466

LysR_substrate

LysR substrate binding domain

116

348

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ihs-assembly1.cif.gz_A crystal structure of benm_dbd/catb site 1 dna complex 0.9518 1 87
4ihs-assembly3.cif.gz_C crystal structure of benm_dbd/catb site 1 dna complex 0.95 1 87
4iht-assembly2.cif.gz_C crystal structure of benm_dbd/bena site 1 dna complex 0.9434 1 84
5xxp-assembly1.cif.gz_B crystal structure of cbnr_dbd-dna complex 0.9348 1 87
4iht-assembly1.cif.gz_A crystal structure of benm_dbd/bena site 1 dna complex 0.9305 1 87
ID Description Score Start End Superfamily
af_P37641_3_87_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9745 2 81 1.10.10.10
af_Q47141_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9729 1 84 1.10.10.10
af_P77171_5_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9719 1 79 1.10.10.10
af_P0ACR7_1_84_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9699 2 82 1.10.10.10
af_Q2G0U3_1_91_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9698 1 85 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3C1AFD5-F1-model_v4 deleted 0.8744 106 299
AF-A0A1M7Z0Z3-F1-model_v4 Hca operon transcriptional activator 0.8623 93 297 GO:0003677
GO:0003700
GO:0032993
AF-A0A2W2B3R1-F1-model_v4 LysR family transcriptional regulator 0.8611 94 296 GO:0003677
GO:0003700
GO:0032993
AF-A0A7Y8AXN9-F1-model_v4 deleted 0.857 96 303
AF-A0A7Y8AXN9-F1-model_v4 deleted 0.8492 96 303

Map