F370541

General Info

Members Datasets Scaffolds Average Seq Length
261 179 522 157

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0030471|Ga0453684_0030471_3996_4514
Length 172
Sequence VDARVKPGHDGVGGVERRDHVSSKIHGVNIIPLRKIPDERGTIMHMLRSDAPHFQKFGEIYFATAYPGVIKAWHLHTRQAQNYCCIQGMIKLVMYDDRDDSPTKGVLQEVFMGDLNYCLVQIPPLLINGWKCIGTGTALLANCADMPHDPTEMVRIDPFDPRVPYDWALKHG

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
8 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
35 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
46 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
55 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
56 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
109 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
112 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
113 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
114 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
115 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
116 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
117 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
118 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
119 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
120 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
121 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
124 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
127 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
130 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
136 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
142 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
147 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
148 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
149 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
150 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
151 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
156 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
157 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
158 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
161 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
164 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
165 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
166 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
167 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
175 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
176 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
177 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
178 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
179 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.53
Nodule 0
Rhizoplane 11.49
Rhizosphere 85.06
Stem 0
Stem Tuber 0
Unclassified 11.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0030471 3300044712 Bacteria 7620
2 Ga0070690_100458347 3300005330 Bacteria 947
3 Ga0068869_100347743 3300005334 Bacteria 1208
4 Ga0068868_100139047 3300005338 Bacteria 1992
5 Ga0068868_100172937 3300005338 Bacteria 1789
6 Ga0070660_100572810 3300005339 Bacteria 943
7 Ga0070689_100000533 3300005340 Bacteria 22655
8 Ga0070691_10210723 3300005341 Unclassified 1025
9 Ga0070692_10209717 3300005345 Bacteria 1146
10 Ga0070668_100032282 3300005347 Bacteria 3985
11 Ga0070669_100239554 3300005353 Bacteria 1441
12 Ga0070674_100211080 3300005356 Bacteria 1505
13 Ga0070674_100461775 3300005356 Unclassified 1050
14 Ga0070688_100022396 3300005365 Bacteria 3702
15 Ga0070659_100113282 3300005366 Bacteria 2191
16 Ga0070709_10057293 3300005434 Bacteria 2467
17 Ga0070714_100205482 3300005435 Bacteria 1803
18 Ga0070710_10047439 3300005437 Bacteria 2396
19 Ga0070711_100003347 3300005439 Bacteria 9329
20 Ga0070705_100111234 3300005440 Bacteria 1750
21 Ga0070705_100234980 3300005440 Bacteria 1277
22 Ga0070705_100487221 3300005440 Bacteria 933
23 Ga0070700_100056135 3300005441 Bacteria 2467
24 Ga0070694_100011060 3300005444 Bacteria 5585
25 Ga0070694_100197599 3300005444 Bacteria 1497
26 Ga0070708_100879486 3300005445 Unclassified 841
27 Ga0070678_100267770 3300005456 Bacteria 1440
28 Ga0070678_101865978 3300005456 Unclassified 567
29 Ga0070662_100139231 3300005457 Bacteria 1879
30 Ga0070662_100270717 3300005457 Bacteria 1371
31 Ga0068867_100724048 3300005459 Bacteria 880
32 Ga0070706_100363956 3300005467 Bacteria 1347
33 Ga0070707_100116037 3300005468 Bacteria 2599
34 Ga0070698_100000290 3300005471 Bacteria 51183
35 Ga0070698_100111405 3300005471 Bacteria 2702
36 Ga0070698_101100181 3300005471 Unclassified 743
37 Ga0070684_100646773 3300005535 Bacteria 984
38 Ga0068853_100178319 3300005539 Bacteria 1926
39 Ga0070672_100106966 3300005543 Bacteria 2276
40 Ga0070686_100275329 3300005544 Bacteria 1239
41 Ga0070695_100031114 3300005545 Bacteria 3325
42 Ga0070696_100045570 3300005546 Bacteria 3039
43 Ga0070696_100076963 3300005546 Bacteria 2357
44 Ga0070696_101273514 3300005546 Unclassified 623
45 Ga0070693_100001638 3300005547 Bacteria 10126
46 Ga0070665_100330031 3300005548 Unclassified 1530
47 Ga0070704_100400265 3300005549 Bacteria 1171
48 Ga0068855_100090901 3300005563 Bacteria 3522
49 Ga0068854_100087871 3300005578 Bacteria 2307
50 Ga0068856_100179329 3300005614 Bacteria 2131
51 Ga0068856_101281863 3300005614 Unclassified 748
52 Ga0070702_100094721 3300005615 Bacteria 1818
53 Ga0070702_100106575 3300005615 Bacteria 1729
54 Ga0068859_100782488 3300005617 Unclassified 1042
55 Ga0068864_100295612 3300005618 Bacteria 1515
56 Ga0068866_10120113 3300005718 Bacteria 1480
57 Ga0068861_100000599 3300005719 Bacteria 21360
58 Ga0068861_102438051 3300005719 Bacteria 526
59 Ga0068851_10356754 3300005834 Bacteria 852
60 Ga0068860_100804540 3300005843 Bacteria 953
61 Ga0068862_100080842 3300005844 Bacteria 2819
62 Ga0081540_1000590 3300005983 Bacteria 34934
63 Ga0070717_10357762 3300006028 Bacteria 1306
64 Ga0070716_100026412 3300006173 Bacteria 3110
65 Ga0070712_100042909 3300006175 Bacteria 3111
66 Ga0070712_100337173 3300006175 Bacteria 1230
67 Ga0070712_100435476 3300006175 Unclassified 1089
68 Ga0075367_10169165 3300006178 Bacteria 1361
69 Ga0097621_100533816 3300006237 Bacteria 1066
70 Ga0075428_100089027 3300006844 Bacteria 3367
71 Ga0075428_100092761 3300006844 Bacteria 3292
72 Ga0075433_10010078 3300006852 Bacteria 7575
73 Ga0075434_100014224 3300006871 Bacteria 7602
74 Ga0075434_100570963 3300006871 Bacteria 1150
75 Ga0075429_100672627 3300006880 Bacteria 907
76 Ga0097620_100782361 3300006931 Unclassified 1042
77 Ga0105240_11268200 3300009093 Bacteria 778
78 Ga0111539_10069427 3300009094 Bacteria 4161
79 Ga0105245_10006486 3300009098 Bacteria 10286
80 Ga0105245_10010198 3300009098 Bacteria 8180
81 Ga0105245_10024483 3300009098 Bacteria 5301
82 Ga0105245_12319843 3300009098 Unclassified 590
83 Ga0114129_10124937 3300009147 Bacteria 3538
84 Ga0114129_10154862 3300009147 Bacteria 3135
85 Ga0114129_11373706 3300009147 Bacteria 873
86 Ga0105243_10008218 3300009148 Bacteria 8018
87 Ga0105243_10213992 3300009148 Bacteria 1699
88 Ga0105243_12330992 3300009148 Unclassified 573
89 Ga0105241_10261874 3300009174 Bacteria 1470
90 Ga0105242_10089286 3300009176 Bacteria 2590
91 Ga0105242_10143835 3300009176 Bacteria 2072
92 Ga0105242_10322527 3300009176 Bacteria 1417
93 Ga0105248_10231872 3300009177 Bacteria 2078
94 Ga0105237_10653445 3300009545 Bacteria 1058
95 Ga0105249_10034776 3300009553 Bacteria 4567
96 Ga0105249_10139995 3300009553 Bacteria 2319
97 Ga0105249_10252268 3300009553 Bacteria 1750
98 Ga0105249_10751983 3300009553 Bacteria 1037
99 Ga0105239_10097871 3300010375 Bacteria 3243
100 Ga0105239_10469583 3300010375 Bacteria 1429
101 Ga0105239_11129923 3300010375 Unclassified 902
102 Ga0105239_11305102 3300010375 Bacteria 837
103 Ga0105246_10268076 3300011119 Bacteria 1364
104 Ga0157378_10267457 3300013297 Unclassified 1643
105 Ga0157378_10955323 3300013297 Bacteria 890
106 Ga0157378_11461584 3300013297 Unclassified 727
107 Ga0163162_10006995 3300013306 Bacteria 10942
108 Ga0157372_10040466 3300013307 Bacteria 5149
109 Ga0157372_10329083 3300013307 Bacteria 1779
110 Ga0157372_12072599 3300013307 Bacteria 654
111 Ga0157375_10152069 3300013308 Bacteria 2451
112 Ga0157379_11336498 3300014968 Bacteria 693
113 Ga0163161_10044108 3300017792 Bacteria 3212
114 Ga0163161_10255876 3300017792 Bacteria 1366
115 Ga0207653_10080327 3300025885 Unclassified 1128
116 Ga0207642_10075867 3300025899 Bacteria 1616
117 Ga0207684_10531929 3300025910 Bacteria 1006
118 Ga0207707_10195295 3300025912 Bacteria 1765
119 Ga0207693_10014785 3300025915 Bacteria 6270
120 Ga0207663_10113710 3300025916 Bacteria 1841
121 Ga0207662_10389522 3300025918 Bacteria 943
122 Ga0207657_10424948 3300025919 Bacteria 1044
123 Ga0207652_10079084 3300025921 Bacteria 2872
124 Ga0207687_10238905 3300025927 Bacteria 1439
125 Ga0207687_10357195 3300025927 Bacteria 1192
126 Ga0207700_10097689 3300025928 Bacteria 2334
127 Ga0207664_10297068 3300025929 Bacteria 1420
128 Ga0207664_10445632 3300025929 Bacteria 1155
129 Ga0207706_10013944 3300025933 Bacteria 7288
130 Ga0207706_10099516 3300025933 Bacteria 2558
131 Ga0207706_10254443 3300025933 Bacteria 1533
132 Ga0207709_10069479 3300025935 Bacteria 2230
133 Ga0207709_10113907 3300025935 Bacteria 1814
134 Ga0207670_10003868 3300025936 Bacteria 7984
135 Ga0207670_10775210 3300025936 Bacteria 798
136 Ga0207669_10120714 3300025937 Bacteria 1779
137 Ga0207665_10043182 3300025939 Bacteria 3014
138 Ga0207691_10385068 3300025940 Bacteria 1197
139 Ga0207667_10105259 3300025949 Bacteria 2911
140 Ga0207667_10358346 3300025949 Bacteria 1487
141 Ga0207668_10057119 3300025972 Bacteria 2721
142 Ga0207677_10129209 3300026023 Bacteria 1915
143 Ga0207639_11196584 3300026041 Bacteria 713
144 Ga0207708_10002644 3300026075 Bacteria 13175
145 Ga0207708_10071558 3300026075 Bacteria 2657
146 Ga0207708_10159552 3300026075 Bacteria 1780
147 Ga0207702_10211877 3300026078 Bacteria 1802
148 Ga0207702_10391275 3300026078 Bacteria 1339
149 Ga0207676_10272402 3300026095 Bacteria 1534
150 Ga0207675_100001628 3300026118 Bacteria 22492
151 Ga0207675_100144487 3300026118 Bacteria 2261
152 Ga0207683_10166809 3300026121 Bacteria 1993
153 Ga0207428_10096646 3300027907 Bacteria 2287
154 Ga0268266_10205842 3300028379 Unclassified 1803
155 Ga0268265_10121513 3300028380 Bacteria 2153
156 Ga0268264_10186885 3300028381 Bacteria 1886
157 Ga0268264_10919963 3300028381 Bacteria 878
158 Ga0265324_10021687 3300029957 Bacteria 2301
159 Ga0265328_10021923 3300031239 Bacteria 2434
160 Ga0265331_10000713 3300031250 Bacteria 28295
161 Ga0307508_10356576 3300031616 Unclassified 1054
162 Ga0373935_1444776 3300035692 Unclassified 514
163 Ga0373925_0424813 3300037068 Bacteria 1086
164 Ga0436365_0546536 3300039437 Bacteria 6719
165 Ga0436365_1676958 3300039437 Bacteria 3177
166 Ga0436362_0324130 3300039453 Bacteria 1960
167 Ga0451853_0786195 3300041512 Unclassified 1137
168 Ga0451853_0805975 3300041512 Unclassified 1146
169 Ga0439431_0169960 3300041997 Bacteria 626
170 Ga0439446_0037517 3300042156 Bacteria 1419
171 Ga0453684_0286463 3300044712 Bacteria 1877
172 Ga0466960_0034395 3300044901 Bacteria 2361
173 Ga0495592_0052623 3300046454 Bacteria 3023
174 Ga0495590_0357417 3300046457 Bacteria 556
175 Ga0495629_0044644 3300046459 Bacteria 3110
176 Ga0495641_0153299 3300046461 Bacteria 1030
177 Ga0495582_0285197 3300046473 Bacteria 948
178 Ga0495630_0121708 3300046517 Bacteria 1980
179 Ga0495630_0351706 3300046517 Bacteria 1128
180 Ga0495637_0124962 3300046520 Bacteria 987
181 Ga0495652_0424890 3300046529 Bacteria 936
182 Ga0495635_0168475 3300046663 Bacteria 1490
183 Ga0495659_0252832 3300046664 Bacteria 735
184 Ga0495588_0543533 3300046674 Bacteria 609
185 Ga0495658_0127136 3300046683 Bacteria 1548
186 Ga0495613_0144702 3300046689 Bacteria 1697
187 Ga0495624_0166279 3300046690 Bacteria 1346
188 Ga0495581_0157972 3300047315 Bacteria 1325
189 Ga0495581_0300110 3300047315 Bacteria 939
190 Ga0495676_0082262 3300047321 Bacteria 2437
191 Ga0496100_0073769 3300048903 Bacteria 2285
192 Ga0496101_0032367 3300048904 Bacteria 3681
193 Ga0496101_0078560 3300048904 Bacteria 2435
194 Ga0496101_0387269 3300048904 Unclassified 1100
195 Ga0496102_0212045 3300048905 Bacteria 1826
196 Ga0496102_0456196 3300048905 Bacteria 1199
197 Ga0496104_0013438 3300048907 Bacteria 7378
198 Ga0496104_0060490 3300048907 Bacteria 3588
199 Ga0496105_0074715 3300048908 Bacteria 2800
200 Ga0496105_1222163 3300048908 Unclassified 552
201 Ga0496106_0029180 3300048909 Bacteria 4110
202 Ga0496106_0057369 3300048909 Bacteria 2945
203 Ga0496106_0671887 3300048909 Bacteria 827
204 Ga0496107_0307055 3300048910 Bacteria 1181
205 Ga0496108_0898624 3300048911 Bacteria 760
206 Ga0496108_1433025 3300048911 Unclassified 577
207 Ga0496109_0003247 3300048912 Bacteria 13547
208 Ga0496109_0313798 3300048912 Bacteria 1479
209 Ga0496109_0741060 3300048912 Bacteria 920
210 Ga0496110_1161240 3300048913 Bacteria 681
211 Ga0496111_0112333 3300048914 Bacteria 2007
212 Ga0496111_0394274 3300048914 Bacteria 1023
213 Ga0496112_0004187 3300048915 Bacteria 12151
214 Ga0496112_0204785 3300048915 Bacteria 1931
215 Ga0496112_0585453 3300048915 Bacteria 1048
216 Ga0496112_1064006 3300048915 Bacteria 728
217 Ga0496113_0918734 3300048916 Bacteria 692
218 Ga0496114_0115735 3300048917 Bacteria 2301
219 Ga0496115_0068361 3300048918 Bacteria 2876
220 Ga0496115_0097221 3300048918 Bacteria 2411
221 Ga0501034_0411682 3300049571 Bacteria 1274
222 Ga0501036_0407877 3300049572 Bacteria 1133
223 Ga0501040_0004548 3300049576 Bacteria 9003
224 Ga0501047_0448215 3300049581 Unclassified 1120
225 Ga0501068_0016850 3300049584 Bacteria 4218
226 Ga0501069_0000414 3300049585 Bacteria 19348
227 Ga0501069_0402811 3300049585 Unclassified 810
228 Ga0501070_0006040 3300049586 Bacteria 10312
229 Ga0501071_0129711 3300049587 Bacteria 1872
230 Ga0501073_0002793 3300049589 Bacteria 13071
231 Ga0501076_0528513 3300049592 Bacteria 972
232 Ga0501079_0138740 3300049741 Bacteria 1894
233 Ga0501080_0017705 3300049742 Bacteria 6592
234 Ga0501080_0085203 3300049742 Bacteria 2936
235 Ga0501080_1363179 3300049742 Unclassified 606
236 Ga0501081_0512506 3300049743 Unclassified 894
237 Ga0501083_0006961 3300049744 Bacteria 8021
238 Ga0501083_0008446 3300049744 Bacteria 7276
239 Ga0501083_0026013 3300049744 Bacteria 4047
240 Ga0501044_0168373 3300049823 Bacteria 2164
241 nmdc:mga03n38_742347_c1 3300050490 Bacteria 568
242 nmdc:mga06z11_66146_c1 3300050494 Bacteria 1899
243 nmdc:mga05p37_1150898_c1 3300050507 Bacteria 807
244 nmdc:mga05p37_196246_c1 3300050507 Bacteria 2447
245 nmdc:mga09592_597181_c1 3300050508 Bacteria 946
246 nmdc:mga08y16_300224_c1 3300050511 Bacteria 1655
247 nmdc:mga08y16_833593_c1 3300050511 Bacteria 913
248 nmdc:mga0n895_12233_c1 3300050512 Bacteria 7690
249 nmdc:mga0n895_317713_c1 3300050512 Bacteria 1578
250 nmdc:mga0rr50_369860_c1 3300050513 Unclassified 1208
251 nmdc:mga0a205_215592_c1 3300050515 Bacteria 1807
252 Ga0495601_0034627 3300053077 Bacteria 3151
253 Ga0495601_0127474 3300053077 Bacteria 1656
254 Ga0495601_0319040 3300053077 Bacteria 1012
255 Ga0495612_0077741 3300053078 Bacteria 1391
256 Ga0495619_0335268 3300053085 Bacteria 1047
257 Ga0500595_003999 3300053119 Bacteria 6731
258 Ga0501084_0002590 3300054114 Bacteria 14575
259 Ga0501084_0547839 3300054114 Bacteria 977
260 Ga0501082_0006368 3300060353 Bacteria 10245
261 Ga0501082_0559376 3300060353 Bacteria 1000
262 Ga0453684_0030471
263 Ga0070690_100458347
264 Ga0068869_100347743
265 Ga0068868_100139047
266 Ga0068868_100172937
267 Ga0070660_100572810
268 Ga0070689_100000533
269 Ga0070691_10210723
270 Ga0070692_10209717
271 Ga0070668_100032282
272 Ga0070669_100239554
273 Ga0070674_100211080
274 Ga0070674_100461775
275 Ga0070688_100022396
276 Ga0070659_100113282
277 Ga0070709_10057293
278 Ga0070714_100205482
279 Ga0070710_10047439
280 Ga0070711_100003347
281 Ga0070705_100111234
282 Ga0070705_100234980
283 Ga0070705_100487221
284 Ga0070700_100056135
285 Ga0070694_100011060
286 Ga0070694_100197599
287 Ga0070708_100879486
288 Ga0070678_100267770
289 Ga0070678_101865978
290 Ga0070662_100139231
291 Ga0070662_100270717
292 Ga0068867_100724048
293 Ga0070706_100363956
294 Ga0070707_100116037
295 Ga0070698_100000290
296 Ga0070698_100111405
297 Ga0070698_101100181
298 Ga0070684_100646773
299 Ga0068853_100178319
300 Ga0070672_100106966
301 Ga0070686_100275329
302 Ga0070695_100031114
303 Ga0070696_100045570
304 Ga0070696_100076963
305 Ga0070696_101273514
306 Ga0070693_100001638
307 Ga0070665_100330031
308 Ga0070704_100400265
309 Ga0068855_100090901
310 Ga0068854_100087871
311 Ga0068856_100179329
312 Ga0068856_101281863
313 Ga0070702_100094721
314 Ga0070702_100106575
315 Ga0068859_100782488
316 Ga0068864_100295612
317 Ga0068866_10120113
318 Ga0068861_100000599
319 Ga0068861_102438051
320 Ga0068851_10356754
321 Ga0068860_100804540
322 Ga0068862_100080842
323 Ga0081540_1000590
324 Ga0070717_10357762
325 Ga0070716_100026412
326 Ga0070712_100042909
327 Ga0070712_100337173
328 Ga0070712_100435476
329 Ga0075367_10169165
330 Ga0097621_100533816
331 Ga0075428_100089027
332 Ga0075428_100092761
333 Ga0075433_10010078
334 Ga0075434_100014224
335 Ga0075434_100570963
336 Ga0075429_100672627
337 Ga0097620_100782361
338 Ga0105240_11268200
339 Ga0111539_10069427
340 Ga0105245_10006486
341 Ga0105245_10010198
342 Ga0105245_10024483
343 Ga0105245_12319843
344 Ga0114129_10124937
345 Ga0114129_10154862
346 Ga0114129_11373706
347 Ga0105243_10008218
348 Ga0105243_10213992
349 Ga0105243_12330992
350 Ga0105241_10261874
351 Ga0105242_10089286
352 Ga0105242_10143835
353 Ga0105242_10322527
354 Ga0105248_10231872
355 Ga0105237_10653445
356 Ga0105249_10034776
357 Ga0105249_10139995
358 Ga0105249_10252268
359 Ga0105249_10751983
360 Ga0105239_10097871
361 Ga0105239_10469583
362 Ga0105239_11129923
363 Ga0105239_11305102
364 Ga0105246_10268076
365 Ga0157378_10267457
366 Ga0157378_10955323
367 Ga0157378_11461584
368 Ga0163162_10006995
369 Ga0157372_10040466
370 Ga0157372_10329083
371 Ga0157372_12072599
372 Ga0157375_10152069
373 Ga0157379_11336498
374 Ga0163161_10044108
375 Ga0163161_10255876
376 Ga0207653_10080327
377 Ga0207642_10075867
378 Ga0207684_10531929
379 Ga0207707_10195295
380 Ga0207693_10014785
381 Ga0207663_10113710
382 Ga0207662_10389522
383 Ga0207657_10424948
384 Ga0207652_10079084
385 Ga0207687_10238905
386 Ga0207687_10357195
387 Ga0207700_10097689
388 Ga0207664_10297068
389 Ga0207664_10445632
390 Ga0207706_10013944
391 Ga0207706_10099516
392 Ga0207706_10254443
393 Ga0207709_10069479
394 Ga0207709_10113907
395 Ga0207670_10003868
396 Ga0207670_10775210
397 Ga0207669_10120714
398 Ga0207665_10043182
399 Ga0207691_10385068
400 Ga0207667_10105259
401 Ga0207667_10358346
402 Ga0207668_10057119
403 Ga0207677_10129209
404 Ga0207639_11196584
405 Ga0207708_10002644
406 Ga0207708_10071558
407 Ga0207708_10159552
408 Ga0207702_10211877
409 Ga0207702_10391275
410 Ga0207676_10272402
411 Ga0207675_100001628
412 Ga0207675_100144487
413 Ga0207683_10166809
414 Ga0207428_10096646
415 Ga0268266_10205842
416 Ga0268265_10121513
417 Ga0268264_10186885
418 Ga0268264_10919963
419 Ga0265324_10021687
420 Ga0265328_10021923
421 Ga0265331_10000713
422 Ga0307508_10356576
423 Ga0373935_1444776
424 Ga0373925_0424813
425 Ga0436365_0546536
426 Ga0436365_1676958
427 Ga0436362_0324130
428 Ga0451853_0786195
429 Ga0451853_0805975
430 Ga0439431_0169960
431 Ga0439446_0037517
432 Ga0453684_0286463
433 Ga0466960_0034395
434 Ga0495592_0052623
435 Ga0495590_0357417
436 Ga0495629_0044644
437 Ga0495641_0153299
438 Ga0495582_0285197
439 Ga0495630_0121708
440 Ga0495630_0351706
441 Ga0495637_0124962
442 Ga0495652_0424890
443 Ga0495635_0168475
444 Ga0495659_0252832
445 Ga0495588_0543533
446 Ga0495658_0127136
447 Ga0495613_0144702
448 Ga0495624_0166279
449 Ga0495581_0157972
450 Ga0495581_0300110
451 Ga0495676_0082262
452 Ga0496100_0073769
453 Ga0496101_0032367
454 Ga0496101_0078560
455 Ga0496101_0387269
456 Ga0496102_0212045
457 Ga0496102_0456196
458 Ga0496104_0013438
459 Ga0496104_0060490
460 Ga0496105_0074715
461 Ga0496105_1222163
462 Ga0496106_0029180
463 Ga0496106_0057369
464 Ga0496106_0671887
465 Ga0496107_0307055
466 Ga0496108_0898624
467 Ga0496108_1433025
468 Ga0496109_0003247
469 Ga0496109_0313798
470 Ga0496109_0741060
471 Ga0496110_1161240
472 Ga0496111_0112333
473 Ga0496111_0394274
474 Ga0496112_0004187
475 Ga0496112_0204785
476 Ga0496112_0585453
477 Ga0496112_1064006
478 Ga0496113_0918734
479 Ga0496114_0115735
480 Ga0496115_0068361
481 Ga0496115_0097221
482 Ga0501034_0411682
483 Ga0501036_0407877
484 Ga0501040_0004548
485 Ga0501047_0448215
486 Ga0501068_0016850
487 Ga0501069_0000414
488 Ga0501069_0402811
489 Ga0501070_0006040
490 Ga0501071_0129711
491 Ga0501073_0002793
492 Ga0501076_0528513
493 Ga0501079_0138740
494 Ga0501080_0017705
495 Ga0501080_0085203
496 Ga0501080_1363179
497 Ga0501081_0512506
498 Ga0501083_0006961
499 Ga0501083_0008446
500 Ga0501083_0026013
501 Ga0501044_0168373
502 nmdc:mga03n38_742347_c1
503 nmdc:mga06z11_66146_c1
504 nmdc:mga05p37_1150898_c1
505 nmdc:mga05p37_196246_c1
506 nmdc:mga09592_597181_c1
507 nmdc:mga08y16_300224_c1
508 nmdc:mga08y16_833593_c1
509 nmdc:mga0n895_12233_c1
510 nmdc:mga0n895_317713_c1
511 nmdc:mga0rr50_369860_c1
512 nmdc:mga0a205_215592_c1
513 Ga0495601_0034627
514 Ga0495601_0127474
515 Ga0495601_0319040
516 Ga0495612_0077741
517 Ga0495619_0335268
518 Ga0500595_003999
519 Ga0501084_0002590
520 Ga0501084_0547839
521 Ga0501082_0006368
522 Ga0501082_0559376

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00908

dTDP_sugar_isom

dTDP-4-dehydrorhamnose 3,5-epimerase

22

171

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ejk-assembly1.cif.gz_A-2 crystal structure of dtdp sugar isomerase (yp_390184.1) from desulfovibrio desulfuricans g20 at 1.95 a resolution 0.959 14 160
3ejk-assembly1.cif.gz_A-2 crystal structure of dtdp sugar isomerase (yp_390184.1) from desulfovibrio desulfuricans g20 at 1.95 a resolution 0.8941 14 160
1upi-assembly1.cif.gz_A mycobacterium tuberculosis rmlc epimerase (rv3465) 0.8792 8 156
4hn0-assembly1.cif.gz_B crystal structure of chmj, a 3'-monoepimerase apoenzyme from streptomyces bikiniensis 0.8772 9 156
4hn1-assembly1.cif.gz_B crystal structure of h60n/y130f double mutant of chmj, a 3'-monoepimerase from streptomyces bikiniensis in complex with dtdp 0.8736 9 147
ID Description Score Start End Superfamily
3ejkA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9446 14 160 2.60.120.10
af_Q17993_17_190_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8965 14 160 2.60.120.10
2ixcB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8919 16 156 2.60.120.10
3ejkA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.886 14 160 2.60.120.10
af_Q9S772_37_227_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.8835 49 135 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A3A4VMR4-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 0.9918 1 156 GO:0000271
GO:0005829
GO:0008830
AF-A0A522V4D9-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 0.9794 13 156 GO:0000271
GO:0005829
GO:0008830
AF-A0A2S7W9A2-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 0.9786 14 148 GO:0000271
GO:0005829
GO:0008830
AF-A0A534JDR9-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9785 12 123 GO:0005829
GO:0008830
GO:0019305
GO:0045226
AF-A0A1Y6CMW7-F1-model_v4 dTDP-4-dehydrorhamnose 3,5-epimerase 0.9781 13 156 GO:0000271
GO:0005829
GO:0008830

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