F370528

General Info

Members Datasets Scaffolds Average Seq Length
261 206 522 393

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0014886|Ga0466961_0014886_2428_3774
Length 448
Sequence LKAVAAVLAATDPLAARTKQGMPIAFFFRDVLRRTSAHTSLAHPFDLIRKMDGKLSPFNPGAGAVPPVLSGRHDTREEVRICIDRLLSGRHANGQLLVGLRGVGKTVLLERLLYDAEQQGAITVHLEAPEVKSLPASIAPAIRVALLRMNQVQMAKDAVIRGLRALSGFVAGLRVKYGDIEVGLDYPPEPGLADCGDLERDLCTLLVEAGRAARLARTALVIFIDEFQGMPQQQLSSLLYALHRCTQHQLPIMLVAAGLPPLIKKVGDAKSYAERMFEIHDIGPLADIDARNAIAIPAEREGVLISPDALDEIVAQTGAYPYFLQQWGKLAWRAANESPITYEHVRQISTSAIEALDKNFYRLRFQRLTFLERRYLRVMAEMGAGPHDARAIAMHFGEPAQALEPVQEALVAKGMLHETLIGETEFSVPRFHEFLKRIMPELTPADAA

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
4 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
11 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
39 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
52 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
62 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
64 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
65 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
88 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
92 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
95 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
96 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
97 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
98 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
99 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
100 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
101 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
102 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
103 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
107 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
108 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
109 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
112 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
113 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
118 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
119 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
122 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
123 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
124 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
125 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
126 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
127 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
128 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
129 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
130 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
131 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
132 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
133 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
134 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
135 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
136 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
137 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
138 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
139 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
140 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
141 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
142 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
143 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
144 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
145 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
146 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
147 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
148 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
149 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
150 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
151 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
152 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
153 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
167 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
171 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
183 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
184 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
185 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
186 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
187 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
188 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
189 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
190 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
191 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
192 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
195 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
196 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
197 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
198 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
199 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
200 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
203 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
204 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
205 2858950400 Achromobacter sp. K91 Isolate Unclassified
206 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.85
Metatranscriptomes 0
Isolates 1.15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.83
Nodule 0.77
Rhizoplane 1.92
Rhizosphere 85.82
Stem 0
Stem Tuber 0
Unclassified 3.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0014886 3300044693 Bacteria 4997
2 JGI24744J21845_10002049 3300002077 Bacteria 4084
3 JGI25156J39149_1009675 3300002705 Bacteria 2325
4 JGI25162J39368_1001143 3300002737 Bacteria 15890
5 JGI25157J39369_1004848 3300002741 Bacteria 2325
6 JGI25164J39214_1000153 3300002772 Bacteria 64982
7 JGI25165J46597_1000155 3300003214 Bacteria 109705
8 rootH2_10258722 3300003320 Bacteria 2536
9 rootH1_10319934 3300003323 Bacteria 1481
10 Ga0065165_1000205 3300005262 Bacteria 102670
11 Ga0070658_10058912 3300005327 Bacteria 3127
12 Ga0070658_10089924 3300005327 Bacteria 2529
13 Ga0070670_100049897 3300005331 Bacteria 3598
14 Ga0070670_100129941 3300005331 Bacteria 2175
15 Ga0070670_100218713 3300005331 Bacteria 1657
16 Ga0068869_100050927 3300005334 Bacteria 3003
17 Ga0070660_100084331 3300005339 Bacteria 2497
18 Ga0070661_100011736 3300005344 Bacteria 6112
19 Ga0070692_10010681 3300005345 Bacteria 4190
20 Ga0070659_100004880 3300005366 Bacteria 9585
21 Ga0070663_100182660 3300005455 Bacteria 1628
22 Ga0068867_100220490 3300005459 Bacteria 1528
23 Ga0070707_100020121 3300005468 Bacteria 6294
24 Ga0070704_100008354 3300005549 Bacteria 6203
25 Ga0070704_100016883 3300005549 Unclassified 4627
26 Ga0068855_100008541 3300005563 Bacteria 12380
27 Ga0068855_100063385 3300005563 Bacteria 4313
28 Ga0070664_100022194 3300005564 Bacteria 5235
29 Ga0068857_100149148 3300005577 Bacteria 2118
30 Ga0068854_100038585 3300005578 Bacteria 3360
31 Ga0068856_100021896 3300005614 Bacteria 6214
32 Ga0068852_100001268 3300005616 Bacteria 16852
33 Ga0068852_100039933 3300005616 Bacteria 3955
34 Ga0068859_100021707 3300005617 Bacteria 6442
35 Ga0068859_100098027 3300005617 Bacteria 2985
36 Ga0068864_100054066 3300005618 Bacteria 3465
37 Ga0068861_100216659 3300005719 Bacteria 1616
38 Ga0068851_10008692 3300005834 Bacteria 4704
39 Ga0068863_100044010 3300005841 Bacteria 4238
40 Ga0068860_100137924 3300005843 Bacteria 2343
41 Ga0068860_100386014 3300005843 Bacteria 1383
42 Ga0068862_100005091 3300005844 Bacteria 11064
43 Ga0068862_100358602 3300005844 Bacteria 1354
44 Ga0075428_100051735 3300006844 Bacteria 4504
45 Ga0075430_100045478 3300006846 Unclassified 3708
46 Ga0075431_100032706 3300006847 Bacteria 5360
47 Ga0075433_10096915 3300006852 Bacteria 2610
48 Ga0075434_100133299 3300006871 Bacteria 2504
49 Ga0097620_100021707 3300006931 Bacteria 6442
50 Ga0097620_100098028 3300006931 Bacteria 2985
51 Ga0099826_10000083 3300006948 Bacteria 47663
52 Ga0105240_10005664 3300009093 Bacteria 18540
53 Ga0105240_10072959 3300009093 Bacteria 4240
54 Ga0105240_10314721 3300009093 Bacteria 1786
55 Ga0111539_10184315 3300009094 Bacteria 2438
56 Ga0105245_10036252 3300009098 Bacteria 4380
57 Ga0105247_10009157 3300009101 Bacteria 6025
58 Ga0105243_10221261 3300009148 Bacteria 1674
59 Ga0105241_10001586 3300009174 Bacteria 17380
60 Ga0105248_10050808 3300009177 Bacteria 4651
61 Ga0105248_10056576 3300009177 Bacteria 4400
62 Ga0105238_10044071 3300009551 Bacteria 4513
63 Ga0105238_10181129 3300009551 Bacteria 2084
64 Ga0105249_10044409 3300009553 Bacteria 4041
65 Ga0157371_10081677 3300013102 Bacteria 2288
66 Ga0157370_10124607 3300013104 Bacteria 2406
67 Ga0157369_10002037 3300013105 Bacteria 24356
68 Ga0157369_10010413 3300013105 Bacteria 10597
69 Ga0157369_10459996 3300013105 Unclassified 1317
70 Ga0157374_10000106 3300013296 Bacteria 76646
71 Ga0157374_10041135 3300013296 Bacteria 4257
72 Ga0157372_10005987 3300013307 Bacteria 12920
73 Ga0157372_10011871 3300013307 Bacteria 9280
74 Ga0157372_10055332 3300013307 Bacteria 4430
75 Ga0157375_10187500 3300013308 Bacteria 2222
76 Ga0163163_10065056 3300014325 Bacteria 3618
77 Ga0157379_10329922 3300014968 Bacteria 1394
78 Ga0213872_10010421 3300021361 Bacteria 4426
79 Ga0213876_10004632 3300021384 Bacteria 7668
80 Ga0207427_100045 3300025231 Bacteria 241857
81 Ga0209437_100297 3300025233 Bacteria 70301
82 Ga0209026_1002793 3300025250 Bacteria 6209
83 Ga0209759_1001456 3300025256 Bacteria 13300
84 Ga0209759_1001553 3300025256 Bacteria 12545
85 Ga0209233_1000116 3300025261 Bacteria 241857
86 Ga0207426_1004892 3300025302 Bacteria 6327
87 Ga0207705_10149421 3300025909 Bacteria 1750
88 Ga0207654_10000025 3300025911 Bacteria 143807
89 Ga0207654_10000035 3300025911 Bacteria 112494
90 Ga0207707_10201904 3300025912 Bacteria 1733
91 Ga0207695_10029810 3300025913 Bacteria 6019
92 Ga0207695_10191730 3300025913 Bacteria 1961
93 Ga0207695_10201818 3300025913 Bacteria 1902
94 Ga0207657_10092300 3300025919 Bacteria 2524
95 Ga0207649_10088892 3300025920 Bacteria 2018
96 Ga0207646_10035362 3300025922 Bacteria 4512
97 Ga0207694_10015939 3300025924 Bacteria 5672
98 Ga0207690_10005756 3300025932 Bacteria 7326
99 Ga0207679_10017812 3300025945 Bacteria 4747
100 Ga0207667_10055137 3300025949 Bacteria 4179
101 Ga0207667_10061012 3300025949 Bacteria 3946
102 Ga0207640_10025606 3300025981 Bacteria 3573
103 Ga0207677_10259645 3300026023 Bacteria 1415
104 Ga0207708_10034744 3300026075 Bacteria 3835
105 Ga0207708_10075931 3300026075 Bacteria 2577
106 Ga0207641_10024030 3300026088 Bacteria 5022
107 Ga0207648_10111191 3300026089 Bacteria 2405
108 Ga0207676_10112120 3300026095 Bacteria 2284
109 Ga0207675_100017639 3300026118 Bacteria 6658
110 Ga0207698_10178709 3300026142 Bacteria 1877
111 Ga0207698_10241995 3300026142 Bacteria 1645
112 Ga0209970_1001261 3300027614 Bacteria 4471
113 Ga0209282_1000030 3300027666 Bacteria 154522
114 Ga0265356_1000254 3300028017 Bacteria 10018
115 Ga0268266_10000931 3300028379 Bacteria 37341
116 Ga0268265_10032017 3300028380 Bacteria 3804
117 Ga0268265_10072647 3300028380 Bacteria 2684
118 Ga0268265_10108581 3300028380 Bacteria 2259
119 Ga0265323_10014794 3300028653 Bacteria 3078
120 Ga0265336_10002519 3300028666 Bacteria 7500
121 Ga0265338_10173101 3300028800 Bacteria 1653
122 Ga0307511_10120909 3300030521 Bacteria 1619
123 Ga0265330_10009984 3300031235 Bacteria 4494
124 Ga0265330_10047219 3300031235 Bacteria 1895
125 Ga0265340_10007788 3300031247 Bacteria 5808
126 Ga0265316_10071159 3300031344 Bacteria 2681
127 Ga0307408_100060502 3300031548 Bacteria 2761
128 Ga0265342_10096006 3300031712 Bacteria 1694
129 Ga0307413_10008570 3300031824 Bacteria 4839
130 Ga0307413_10139705 3300031824 Unclassified 1672
131 Ga0307410_10089780 3300031852 Bacteria 2178
132 Ga0307510_10000098 3300033180 Bacteria 67319
133 Ga0436364_1331275 3300037853 Bacteria 8572
134 Ga0395901_0117487 3300038443 Bacteria 2794
135 Ga0436365_0112899 3300039437 Bacteria 31591
136 Ga0436360_0303526 3300039438 Bacteria 7334
137 Ga0436361_1153742 3300039447 Bacteria 3844
138 Ga0436362_1239927 3300039453 Bacteria 1628
139 Ga0439466_0003145 3300041411 Bacteria 6424
140 Ga0451577_0004940 3300042876 Bacteria 13872
141 Ga0466972_0052414 3300044658 Bacteria 1966
142 Ga0453683_0141059 3300044673 Bacteria 1521
143 Ga0453684_0097241 3300044712 Bacteria 3614
144 Ga0466957_0031212 3300044842 Bacteria 3183
145 Ga0451576_0000013 3300045051 Bacteria 665120
146 Ga0451576_0000530 3300045051 Bacteria 82499
147 Ga0466967_0077900 3300045976 Bacteria 2985
148 Ga0495617_002105 3300046452 Bacteria 8217
149 Ga0495617_007876 3300046452 Bacteria 3686
150 Ga0495627_000085 3300046453 Bacteria 112005
151 Ga0495591_025861 3300046458 Bacteria 1834
152 Ga0495638_0006138 3300046460 Bacteria 8787
153 Ga0495650_0000487 3300046471 Bacteria 60407
154 Ga0495650_0017592 3300046471 Bacteria 3580
155 Ga0495582_0107945 3300046473 Bacteria 1563
156 Ga0495605_0003036 3300046474 Bacteria 10133
157 Ga0495584_0004563 3300046491 Bacteria 7428
158 Ga0495585_0000883 3300046492 Bacteria 25391
159 Ga0495594_0002871 3300046499 Bacteria 8958
160 Ga0495596_0000661 3300046500 Bacteria 21484
161 Ga0495596_0012227 3300046500 Bacteria 3681
162 Ga0495583_0000863 3300046506 Bacteria 36826
163 Ga0495606_0000174 3300046507 Bacteria 113955
164 Ga0495610_0000287 3300046512 Bacteria 52829
165 Ga0495610_0006258 3300046512 Bacteria 8247
166 Ga0495616_0000028 3300046513 Bacteria 133873
167 Ga0495620_0000111 3300046515 Bacteria 65090
168 Ga0495632_0000283 3300046519 Bacteria 49720
169 Ga0495644_0000081 3300046523 Bacteria 46968
170 Ga0495648_0007470 3300046524 Bacteria 8739
171 Ga0495663_0000317 3300046525 Bacteria 18081
172 Ga0495666_0019482 3300046526 Unclassified 3367
173 Ga0495654_0039777 3300046530 Unclassified 2346
174 Ga0495654_0069653 3300046530 Bacteria 1670
175 Ga0495587_0008286 3300046536 Bacteria 6691
176 Ga0495609_0000521 3300046538 Bacteria 30882
177 Ga0495645_0033664 3300046543 Bacteria 3738
178 Ga0495611_0000041 3300046648 Bacteria 98699
179 Ga0495625_0008474 3300046660 Bacteria 8772
180 Ga0495661_0027318 3300046665 Bacteria 3665
181 Ga0495613_0078261 3300046689 Bacteria 2406
182 Ga0495670_0026778 3300046691 Bacteria 2854
183 Ga0495671_0001209 3300046692 Bacteria 17686
184 Ga0495671_0001664 3300046692 Bacteria 14552
185 Ga0495589_0000729 3300046794 Bacteria 21260
186 Ga0495589_0019695 3300046794 Bacteria 3455
187 Ga0495660_0001092 3300046810 Bacteria 19373
188 Ga0495660_0005370 3300046810 Bacteria 7674
189 Ga0495604_0073019 3300047317 Bacteria 2591
190 Ga0495680_0131331 3300047322 Bacteria 1840
191 Ga0495683_0000546 3300047323 Bacteria 28594
192 Ga0495681_0000066 3300047470 Bacteria 97917
193 Ga0495681_0001462 3300047470 Bacteria 17670
194 Ga0495681_0007048 3300047470 Bacteria 7255
195 Ga0495686_0011490 3300047472 Bacteria 6235
196 Ga0495626_0000001 3300048091 Bacteria 1077129
197 Ga0496102_0015398 3300048905 Bacteria 6661
198 Ga0496104_0119759 3300048907 Bacteria 2527
199 Ga0496104_0144575 3300048907 Bacteria 2284
200 Ga0496109_0072671 3300048912 Bacteria 3160
201 Ga0496115_0034749 3300048918 Bacteria 3984
202 Ga0496116_0014314 3300048919 Bacteria 6341
203 Ga0496117_0000581 3300048920 Bacteria 60186
204 Ga0496118_0001068 3300048921 Bacteria 42766
205 Ga0496121_0000756 3300048924 Bacteria 59448
206 Ga0496124_0167729 3300048927 Bacteria 1704
207 Ga0496126_0187667 3300048929 Bacteria 1752
208 Ga0495678_001267 3300049459 Bacteria 20519
209 Ga0501031_0070851 3300049568 Bacteria 2271
210 Ga0501032_0004444 3300049569 Bacteria 10572
211 Ga0501032_0167311 3300049569 Bacteria 1442
212 Ga0501033_0160451 3300049570 Unclassified 1619
213 Ga0501036_0066682 3300049572 Bacteria 3045
214 Ga0501037_0104944 3300049573 Bacteria 2037
215 Ga0501038_0090930 3300049574 Bacteria 2557
216 Ga0501038_0138342 3300049574 Bacteria 1994
217 Ga0501039_0106358 3300049575 Bacteria 2191
218 Ga0501040_0055408 3300049576 Bacteria 2718
219 Ga0501041_0020536 3300049577 Bacteria 3950
220 Ga0501042_0019722 3300049578 Bacteria 4687
221 Ga0501043_0012559 3300049579 Bacteria 6623
222 Ga0501043_0100218 3300049579 Bacteria 2277
223 Ga0501046_0046936 3300049580 Bacteria 3426
224 Ga0501047_0028254 3300049581 Bacteria 5406
225 Ga0501047_0047039 3300049581 Bacteria 4169
226 Ga0501047_0092133 3300049581 Bacteria 2909
227 Ga0501048_0050937 3300049582 Bacteria 2948
228 Ga0501070_0060850 3300049586 Bacteria 3129
229 Ga0501070_0071126 3300049586 Bacteria 2881
230 Ga0501070_0091065 3300049586 Bacteria 2524
231 Ga0501072_0008022 3300049588 Bacteria 8013
232 Ga0501074_0034033 3300049590 Bacteria 3694
233 Ga0501075_0021144 3300049591 Bacteria 4740
234 Ga0501076_0003922 3300049592 Bacteria 10492
235 Ga0501077_0050791 3300049593 Bacteria 2635
236 Ga0501079_0034965 3300049741 Bacteria 3866
237 Ga0501080_0047058 3300049742 Bacteria 4015
238 Ga0501080_0119493 3300049742 Bacteria 2443
239 Ga0501081_0059522 3300049743 Bacteria 2644
240 Ga0501081_0162298 3300049743 Unclassified 1611
241 Ga0501083_0048616 3300049744 Bacteria 2862
242 Ga0501035_0003539 3300049822 Bacteria 14921
243 Ga0501044_0034444 3300049823 Bacteria 5310
244 Ga0501044_0103001 3300049823 Bacteria 2869
245 Ga0501044_0140410 3300049823 Bacteria 2405
246 Ga0501044_0142940 3300049823 Bacteria 2380
247 Ga0501045_0028353 3300049824 Bacteria 4038
248 nmdc:mga0qj67_30572_c1 3300050509 Unclassified 4194
249 nmdc:mga06r32_12270_c1 3300050510 Bacteria 7727
250 nmdc:mga08y16_153401_c1 3300050511 Bacteria 2394
251 nmdc:mga0a205_58878_c1 3300050515 Bacteria 2000
252 Ga0495601_0150990 3300053077 Bacteria 1517
253 Ga0500583_0044113 3300053092 Bacteria 2040
254 Ga0500555_000937 3300053103 Bacteria 10195
255 Ga0501084_0021804 3300054114 Bacteria 5342
256 Ga0501084_0037991 3300054114 Bacteria 4024
257 Ga0501082_0040982 3300060353 Bacteria 3992
258 Ga0530510_0025117 3300061734 Bacteria 4259
259 2687577577 2687453129 Bacteria 4387428
260 2858951274 2858950400 Bacteria 6783797
261 642417255 641736154 Bacteria 7689995
262 Ga0466961_0014886
263 JGI24744J21845_10002049
264 JGI25156J39149_1009675
265 JGI25162J39368_1001143
266 JGI25157J39369_1004848
267 JGI25164J39214_1000153
268 JGI25165J46597_1000155
269 rootH2_10258722
270 rootH1_10319934
271 Ga0065165_1000205
272 Ga0070658_10058912
273 Ga0070658_10089924
274 Ga0070670_100049897
275 Ga0070670_100129941
276 Ga0070670_100218713
277 Ga0068869_100050927
278 Ga0070660_100084331
279 Ga0070661_100011736
280 Ga0070692_10010681
281 Ga0070659_100004880
282 Ga0070663_100182660
283 Ga0068867_100220490
284 Ga0070707_100020121
285 Ga0070704_100008354
286 Ga0070704_100016883
287 Ga0068855_100008541
288 Ga0068855_100063385
289 Ga0070664_100022194
290 Ga0068857_100149148
291 Ga0068854_100038585
292 Ga0068856_100021896
293 Ga0068852_100001268
294 Ga0068852_100039933
295 Ga0068859_100021707
296 Ga0068859_100098027
297 Ga0068864_100054066
298 Ga0068861_100216659
299 Ga0068851_10008692
300 Ga0068863_100044010
301 Ga0068860_100137924
302 Ga0068860_100386014
303 Ga0068862_100005091
304 Ga0068862_100358602
305 Ga0075428_100051735
306 Ga0075430_100045478
307 Ga0075431_100032706
308 Ga0075433_10096915
309 Ga0075434_100133299
310 Ga0097620_100021707
311 Ga0097620_100098028
312 Ga0099826_10000083
313 Ga0105240_10005664
314 Ga0105240_10072959
315 Ga0105240_10314721
316 Ga0111539_10184315
317 Ga0105245_10036252
318 Ga0105247_10009157
319 Ga0105243_10221261
320 Ga0105241_10001586
321 Ga0105248_10050808
322 Ga0105248_10056576
323 Ga0105238_10044071
324 Ga0105238_10181129
325 Ga0105249_10044409
326 Ga0157371_10081677
327 Ga0157370_10124607
328 Ga0157369_10002037
329 Ga0157369_10010413
330 Ga0157369_10459996
331 Ga0157374_10000106
332 Ga0157374_10041135
333 Ga0157372_10005987
334 Ga0157372_10011871
335 Ga0157372_10055332
336 Ga0157375_10187500
337 Ga0163163_10065056
338 Ga0157379_10329922
339 Ga0213872_10010421
340 Ga0213876_10004632
341 Ga0207427_100045
342 Ga0209437_100297
343 Ga0209026_1002793
344 Ga0209759_1001456
345 Ga0209759_1001553
346 Ga0209233_1000116
347 Ga0207426_1004892
348 Ga0207705_10149421
349 Ga0207654_10000025
350 Ga0207654_10000035
351 Ga0207707_10201904
352 Ga0207695_10029810
353 Ga0207695_10191730
354 Ga0207695_10201818
355 Ga0207657_10092300
356 Ga0207649_10088892
357 Ga0207646_10035362
358 Ga0207694_10015939
359 Ga0207690_10005756
360 Ga0207679_10017812
361 Ga0207667_10055137
362 Ga0207667_10061012
363 Ga0207640_10025606
364 Ga0207677_10259645
365 Ga0207708_10034744
366 Ga0207708_10075931
367 Ga0207641_10024030
368 Ga0207648_10111191
369 Ga0207676_10112120
370 Ga0207675_100017639
371 Ga0207698_10178709
372 Ga0207698_10241995
373 Ga0209970_1001261
374 Ga0209282_1000030
375 Ga0265356_1000254
376 Ga0268266_10000931
377 Ga0268265_10032017
378 Ga0268265_10072647
379 Ga0268265_10108581
380 Ga0265323_10014794
381 Ga0265336_10002519
382 Ga0265338_10173101
383 Ga0307511_10120909
384 Ga0265330_10009984
385 Ga0265330_10047219
386 Ga0265340_10007788
387 Ga0265316_10071159
388 Ga0307408_100060502
389 Ga0265342_10096006
390 Ga0307413_10008570
391 Ga0307413_10139705
392 Ga0307410_10089780
393 Ga0307510_10000098
394 Ga0436364_1331275
395 Ga0395901_0117487
396 Ga0436365_0112899
397 Ga0436360_0303526
398 Ga0436361_1153742
399 Ga0436362_1239927
400 Ga0439466_0003145
401 Ga0451577_0004940
402 Ga0466972_0052414
403 Ga0453683_0141059
404 Ga0453684_0097241
405 Ga0466957_0031212
406 Ga0451576_0000013
407 Ga0451576_0000530
408 Ga0466967_0077900
409 Ga0495617_002105
410 Ga0495617_007876
411 Ga0495627_000085
412 Ga0495591_025861
413 Ga0495638_0006138
414 Ga0495650_0000487
415 Ga0495650_0017592
416 Ga0495582_0107945
417 Ga0495605_0003036
418 Ga0495584_0004563
419 Ga0495585_0000883
420 Ga0495594_0002871
421 Ga0495596_0000661
422 Ga0495596_0012227
423 Ga0495583_0000863
424 Ga0495606_0000174
425 Ga0495610_0000287
426 Ga0495610_0006258
427 Ga0495616_0000028
428 Ga0495620_0000111
429 Ga0495632_0000283
430 Ga0495644_0000081
431 Ga0495648_0007470
432 Ga0495663_0000317
433 Ga0495666_0019482
434 Ga0495654_0039777
435 Ga0495654_0069653
436 Ga0495587_0008286
437 Ga0495609_0000521
438 Ga0495645_0033664
439 Ga0495611_0000041
440 Ga0495625_0008474
441 Ga0495661_0027318
442 Ga0495613_0078261
443 Ga0495670_0026778
444 Ga0495671_0001209
445 Ga0495671_0001664
446 Ga0495589_0000729
447 Ga0495589_0019695
448 Ga0495660_0001092
449 Ga0495660_0005370
450 Ga0495604_0073019
451 Ga0495680_0131331
452 Ga0495683_0000546
453 Ga0495681_0000066
454 Ga0495681_0001462
455 Ga0495681_0007048
456 Ga0495686_0011490
457 Ga0495626_0000001
458 Ga0496102_0015398
459 Ga0496104_0119759
460 Ga0496104_0144575
461 Ga0496109_0072671
462 Ga0496115_0034749
463 Ga0496116_0014314
464 Ga0496117_0000581
465 Ga0496118_0001068
466 Ga0496121_0000756
467 Ga0496124_0167729
468 Ga0496126_0187667
469 Ga0495678_001267
470 Ga0501031_0070851
471 Ga0501032_0004444
472 Ga0501032_0167311
473 Ga0501033_0160451
474 Ga0501036_0066682
475 Ga0501037_0104944
476 Ga0501038_0090930
477 Ga0501038_0138342
478 Ga0501039_0106358
479 Ga0501040_0055408
480 Ga0501041_0020536
481 Ga0501042_0019722
482 Ga0501043_0012559
483 Ga0501043_0100218
484 Ga0501046_0046936
485 Ga0501047_0028254
486 Ga0501047_0047039
487 Ga0501047_0092133
488 Ga0501048_0050937
489 Ga0501070_0060850
490 Ga0501070_0071126
491 Ga0501070_0091065
492 Ga0501072_0008022
493 Ga0501074_0034033
494 Ga0501075_0021144
495 Ga0501076_0003922
496 Ga0501077_0050791
497 Ga0501079_0034965
498 Ga0501080_0047058
499 Ga0501080_0119493
500 Ga0501081_0059522
501 Ga0501081_0162298
502 Ga0501083_0048616
503 Ga0501035_0003539
504 Ga0501044_0034444
505 Ga0501044_0103001
506 Ga0501044_0140410
507 Ga0501044_0142940
508 Ga0501045_0028353
509 nmdc:mga0qj67_30572_c1
510 nmdc:mga06r32_12270_c1
511 nmdc:mga08y16_153401_c1
512 nmdc:mga0a205_58878_c1
513 Ga0495601_0150990
514 Ga0500583_0044113
515 Ga0500555_000937
516 Ga0501084_0021804
517 Ga0501084_0037991
518 Ga0501082_0040982
519 Ga0530510_0025117
520 2687577577
521 2858951274
522 642417255

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13191

AAA_16

AAA ATPase domain

68

255

0.79

PF13401

AAA_22

AAA domain

89

265

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
1j75-assembly1.cif.gz_A-2 crystal structure of the dna-binding domain zalpha of dlm-1 bound to z-dna 0.8931 322 376
2heo-assembly1.cif.gz_A general structure-based approach to the design of protein ligands: application to the design of kv1.2 potassium channel blockers. 0.8917 329 376
5y6i-assembly1.cif.gz_B crystal structure of pseudomonas aeruginosa hmgr 0.8874 321 376
4ija-assembly1.cif.gz_B structure of s. aureus methicillin resistance factor mecr2 0.8753 321 377
2lnb-assembly1.cif.gz_A solution nmr structure of n-terminal domain (6-74) of human zbp1 protein, northeast structural genomics consortium target hr8174a. 0.86 322 377
ID Description Score Start End Superfamily
af_Q9W1E5_570_720_3.30.230.130 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Cullin; Chain C, Domain 2 0.936 336 376 3.30.230.130
af_A0A0R4ISV4_565_710_3.30.230.130 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;Cullin; Chain C, Domain 2 0.9002 335 376 3.30.230.130
af_Q9QY24_7_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8999 322 377 1.10.10.10
1iqpA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8974 236 300 1.10.8.60
af_Q58817_1690_1755_1.10.8.60 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.8952 235 300 1.10.8.60
ID Description Score Start End GO Terms
AF-A0A179BKF3-F1-model_v4 MarR family transcriptional regulator 0.9812 310 393
AF-A0A136QNE3-F1-model_v4 deleted 0.9784 190 394
AF-A0A1G7AIC2-F1-model_v4 Uncharacterized protein 0.9741 23 232
AF-A0A353GJP0-F1-model_v4 AAA family ATPase 0.972 1 258
AF-W0DXX2-F1-model_v4 ATPase AAA 0.9717 1 391

Map