F370512

General Info

Members Datasets Scaffolds Average Seq Length
261 187 522 424

Family's Representative Sequence

Representative Sequence 3300042144|Ga0450889_001025|Ga0450889_001025_995_2404
Length 469
Sequence MPNAQRIADGRLHYGWIVAAVTFLILLAASAIRATPGVLIVPLEQTFGWSRATVSFAISVNLLLYGLCGPFAAALMERLGVRRVIVLSLSLVTVGVALTTVMRAPWQLVLLWGVVVGIGTGATALVLAATVANRWFVARRGLVIGVLTASTATGQLLFLPLLATVVDHSGWRAAALLVAAIALAMVPVVFVLMRDQPRDLGLRAFGDLEGQAAPSVATRPAGALAALGEGARSRDFWLLSGSFFICGLSTNGLIGTHLIPASMDHGMPAVTAAGLLAAMGVFDLIGTTISGWLSDRWDNRRLLFWYYGLRGLSLMLLPYAYGSAYFGLTLFALFYGLDWVATVPPTVRLTETLFGKARVGIMYGWIAVAHQMGASTAAFGAGVLRTWLGSYQVAFTGAGFVCLIAAVMVLTIGQGRITVPSRRRAAEISGAVESSPLSAGAGRARRAPGAPAGRAPGPSGSGPRWRDRP

Samples

Sample ID Description Type Environment
1 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
14 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
23 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
36 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
41 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
42 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
57 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
60 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
66 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
70 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
73 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
113 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
114 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
115 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
116 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
117 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
118 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
119 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
120 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
123 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
126 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
127 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
133 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
136 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
137 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
138 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
139 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
140 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
141 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
142 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
143 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
144 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
145 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
146 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
147 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
148 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
149 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
150 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
154 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
164 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
165 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
176 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
177 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
178 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
179 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
180 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
181 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
182 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
183 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
184 2902330777 Methylobacterium sp. 2A Isolate Unclassified
185 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
186 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
187 2928125067 Methylobacterium sp. 1973 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.79
Metatranscriptomes 0.38
Isolates 3.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.15
Nodule 0
Rhizoplane 2.68
Rhizosphere 86.59
Stem 0
Stem Tuber 0
Unclassified 1.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0450889_001025 3300042144 Bacteria 2947
2 rootH1_10152905 3300003316 Bacteria 2817
3 Ga0070658_10051348 3300005327 Bacteria 3342
4 Ga0070676_10000970 3300005328 Bacteria 14273
5 Ga0070690_100001382 3300005330 Bacteria 12647
6 Ga0070670_100002280 3300005331 Bacteria 15795
7 Ga0068869_100002059 3300005334 Bacteria 12091
8 Ga0070680_100000805 3300005336 Bacteria 22115
9 Ga0068868_100060599 3300005338 Bacteria 2997
10 Ga0070660_100007941 3300005339 Bacteria 7408
11 Ga0070689_100056446 3300005340 Bacteria 3045
12 Ga0070691_10003272 3300005341 Bacteria 7266
13 Ga0070691_10006203 3300005341 Bacteria 5455
14 Ga0070687_100026892 3300005343 Bacteria 2774
15 Ga0070692_10000813 3300005345 Bacteria 10388
16 Ga0070669_100013427 3300005353 Bacteria 5824
17 Ga0070675_100227089 3300005354 Bacteria 1628
18 Ga0070673_100034370 3300005364 Bacteria 3836
19 Ga0070659_100003723 3300005366 Bacteria 10876
20 Ga0070667_100182713 3300005367 Bacteria 1855
21 Ga0070703_10001106 3300005406 Bacteria 8362
22 Ga0070709_10003082 3300005434 Bacteria 8959
23 Ga0070710_10004493 3300005437 Bacteria 6598
24 Ga0070711_100005908 3300005439 Bacteria 7348
25 Ga0070705_100001417 3300005440 Bacteria 12668
26 Ga0070694_100004333 3300005444 Bacteria 8530
27 Ga0070694_100010114 3300005444 Bacteria 5803
28 Ga0070708_100000129 3300005445 Bacteria 51544
29 Ga0070708_100055537 3300005445 Bacteria 3522
30 Ga0070708_100060019 3300005445 Bacteria 3393
31 Ga0070663_100006140 3300005455 Bacteria 7193
32 Ga0070681_10049088 3300005458 Bacteria 4216
33 Ga0068867_100002225 3300005459 Bacteria 13622
34 Ga0070706_100000156 3300005467 Bacteria 86633
35 Ga0070706_100007023 3300005467 Bacteria 10616
36 Ga0070706_100068848 3300005467 Bacteria 3273
37 Ga0070706_100088875 3300005467 Bacteria 2865
38 Ga0070707_100000078 3300005468 Bacteria 86633
39 Ga0070707_100005082 3300005468 Bacteria 12331
40 Ga0070707_100123779 3300005468 Bacteria 2511
41 Ga0070698_100001351 3300005471 Bacteria 27275
42 Ga0070698_100005918 3300005471 Bacteria 13340
43 Ga0070698_100046618 3300005471 Bacteria 4432
44 Ga0070698_100062372 3300005471 Bacteria 3761
45 Ga0070698_100070537 3300005471 Bacteria 3506
46 Ga0070698_100084457 3300005471 Bacteria 3163
47 Ga0070698_100209293 3300005471 Bacteria 1885
48 Ga0070699_100000019 3300005518 Bacteria 185937
49 Ga0070699_100000254 3300005518 Bacteria 52437
50 Ga0070699_100009543 3300005518 Bacteria 8410
51 Ga0070699_100028784 3300005518 Bacteria 4791
52 Ga0070699_100048554 3300005518 Bacteria 3674
53 Ga0070699_100144657 3300005518 Bacteria 2100
54 Ga0070679_100002406 3300005530 Bacteria 16968
55 Ga0070679_100053585 3300005530 Bacteria 4015
56 Ga0070679_100144811 3300005530 Bacteria 2354
57 Ga0070684_100034881 3300005535 Bacteria 4304
58 Ga0070697_100034205 3300005536 Bacteria 4097
59 Ga0070697_100034964 3300005536 Bacteria 4053
60 Ga0070697_100079576 3300005536 Bacteria 2698
61 Ga0068853_100012891 3300005539 Bacteria 6812
62 Ga0070695_100009241 3300005545 Bacteria 5861
63 Ga0070696_100000491 3300005546 Bacteria 24846
64 Ga0070693_100000296 3300005547 Bacteria 23271
65 Ga0070665_100165023 3300005548 Bacteria 2217
66 Ga0070704_100000946 3300005549 Bacteria 14683
67 Ga0070704_100080797 3300005549 Bacteria 2392
68 Ga0068855_100004037 3300005563 Bacteria 17922
69 Ga0068855_100017845 3300005563 Bacteria 8529
70 Ga0068854_100015588 3300005578 Bacteria 5039
71 Ga0068856_100004878 3300005614 Bacteria 13285
72 Ga0070702_100027883 3300005615 Bacteria 3053
73 Ga0068861_100037135 3300005719 Bacteria 3621
74 Ga0068863_100018561 3300005841 Bacteria 6657
75 Ga0068858_100015267 3300005842 Bacteria 7227
76 Ga0068858_100106962 3300005842 Bacteria 2611
77 Ga0068860_100005548 3300005843 Bacteria 12772
78 Ga0081540_1017303 3300005983 Bacteria 4467
79 Ga0070717_10000664 3300006028 Bacteria 22126
80 Ga0070717_10000684 3300006028 Bacteria 21843
81 Ga0070716_100000746 3300006173 Bacteria 13916
82 Ga0070712_100032579 3300006175 Bacteria 3520
83 Ga0075428_100086919 3300006844 Bacteria 3410
84 Ga0075433_10025712 3300006852 Bacteria 4978
85 Ga0075433_10060455 3300006852 Bacteria 3317
86 Ga0075433_10114715 3300006852 Bacteria 2390
87 Ga0075434_100093537 3300006871 Bacteria 3010
88 Ga0075435_100020467 3300007076 Bacteria 5071
89 Ga0099794_10021572 3300007265 Bacteria 2927
90 Ga0114129_10014289 3300009147 Bacteria 11313
91 Ga0114129_10014662 3300009147 Bacteria 11165
92 Ga0114129_10070715 3300009147 Bacteria 4866
93 Ga0114129_10124031 3300009147 Bacteria 3552
94 Ga0114129_10174551 3300009147 Unclassified 2928
95 Ga0105241_10001307 3300009174 Bacteria 18958
96 Ga0105248_10026416 3300009177 Bacteria 6459
97 Ga0105237_10006005 3300009545 Bacteria 13591
98 Ga0105238_10123396 3300009551 Bacteria 2569
99 Ga0157373_10006147 3300013100 Bacteria 8978
100 Ga0157371_10041968 3300013102 Bacteria 3262
101 Ga0163162_10000877 3300013306 Bacteria 28017
102 Ga0157372_10000318 3300013307 Bacteria 52922
103 Ga0206356_10101677 3300020070 Bacteria 2103
104 Ga0213872_10011420 3300021361 Bacteria 4200
105 Ga0213876_10001620 3300021384 Bacteria 13759
106 Ga0213875_10000498 3300021388 Bacteria 32954
107 Ga0209050_1001211 3300025298 Bacteria 30267
108 Ga0209050_1001866 3300025298 Bacteria 20282
109 Ga0207653_10000690 3300025885 Bacteria 11599
110 Ga0207688_10040152 3300025901 Bacteria 2600
111 Ga0207647_10091865 3300025904 Bacteria 1810
112 Ga0207645_10000318 3300025907 Bacteria 40262
113 Ga0207643_10000742 3300025908 Bacteria 20054
114 Ga0207684_10000227 3300025910 Bacteria 86625
115 Ga0207684_10009154 3300025910 Bacteria 8764
116 Ga0207684_10097721 3300025910 Bacteria 2507
117 Ga0207707_10004090 3300025912 Bacteria 12922
118 Ga0207707_10022187 3300025912 Bacteria 5550
119 Ga0207671_10015631 3300025914 Bacteria 5935
120 Ga0207693_10023953 3300025915 Bacteria 4846
121 Ga0207693_10053409 3300025915 Bacteria 3170
122 Ga0207663_10070078 3300025916 Bacteria 2258
123 Ga0207660_10000147 3300025917 Bacteria 42848
124 Ga0207662_10031081 3300025918 Bacteria 3102
125 Ga0207657_10000368 3300025919 Bacteria 47501
126 Ga0207657_10014143 3300025919 Bacteria 7807
127 Ga0207649_10004244 3300025920 Bacteria 7806
128 Ga0207652_10011723 3300025921 Bacteria 7075
129 Ga0207646_10000040 3300025922 Bacteria 187418
130 Ga0207646_10000179 3300025922 Bacteria 86647
131 Ga0207646_10005965 3300025922 Bacteria 12706
132 Ga0207646_10007346 3300025922 Bacteria 11220
133 Ga0207646_10029930 3300025922 Bacteria 4943
134 Ga0207646_10063063 3300025922 Bacteria 3309
135 Ga0207650_10012699 3300025925 Bacteria 5815
136 Ga0207659_10127278 3300025926 Bacteria 1961
137 Ga0207664_10061466 3300025929 Bacteria 2997
138 Ga0207690_10149053 3300025932 Bacteria 1733
139 Ga0207706_10000345 3300025933 Bacteria 50186
140 Ga0207670_10054528 3300025936 Bacteria 2698
141 Ga0207665_10000424 3300025939 Bacteria 29115
142 Ga0207689_10000934 3300025942 Bacteria 28044
143 Ga0207679_10007506 3300025945 Bacteria 6920
144 Ga0207667_10005563 3300025949 Bacteria 15379
145 Ga0207667_10016333 3300025949 Bacteria 8390
146 Ga0207667_10029362 3300025949 Bacteria 5964
147 Ga0207651_10100271 3300025960 Bacteria 2147
148 Ga0207640_10015836 3300025981 Bacteria 4374
149 Ga0207658_10016185 3300025986 Bacteria 5125
150 Ga0207658_10160074 3300025986 Bacteria 1844
151 Ga0207677_10027806 3300026023 Bacteria 3569
152 Ga0207703_10003856 3300026035 Bacteria 12457
153 Ga0207703_10072512 3300026035 Bacteria 2847
154 Ga0207639_10053624 3300026041 Bacteria 3077
155 Ga0207678_10002648 3300026067 Bacteria 16277
156 Ga0207702_10023399 3300026078 Bacteria 5123
157 Ga0207648_10000438 3300026089 Bacteria 46066
158 Ga0207674_10002470 3300026116 Bacteria 23343
159 Ga0268266_10332601 3300028379 Bacteria 1424
160 Ga0268264_10006830 3300028381 Bacteria 9585
161 Ga0307515_10022872 3300028794 Bacteria 10995
162 Ga0307509_10034661 3300031507 Bacteria 5544
163 Ga0307509_10077078 3300031507 Bacteria 3457
164 Ga0307409_100126621 3300031995 Bacteria 2174
165 Ga0373949_0000104 3300035090 Bacteria 31468
166 Ga0373949_0009247 3300035090 Bacteria 2160
167 Ga0373923_0054169 3300035111 Bacteria 1688
168 Ga0373941_0004844 3300035115 Bacteria 3136
169 Ga0373954_0005134 3300035118 Bacteria 5653
170 Ga0373956_0018956 3300035119 Bacteria 2914
171 Ga0373933_0001940 3300035724 Bacteria 11936
172 Ga0373937_0405876 3300036401 Bacteria 1293
173 Ga0436364_0726974 3300037853 Bacteria 13796
174 Ga0436364_0805523 3300037853 Bacteria 10854
175 Ga0436365_0158958 3300039437 Bacteria 3460
176 Ga0436365_0905050 3300039437 Bacteria 6461
177 Ga0436361_0267920 3300039447 Bacteria 8450
178 Ga0436361_0356024 3300039447 Bacteria 2564
179 Ga0439448_0021943 3300042005 Bacteria 1980
180 Ga0451577_0008181 3300042876 Bacteria 10195
181 Ga0451577_0122118 3300042876 Bacteria 2334
182 Ga0466969_0006252 3300044656 Bacteria 6335
183 Ga0466966_0001867 3300044684 Bacteria 13665
184 Ga0466961_0028287 3300044693 Bacteria 3603
185 Ga0466964_0000151 3300044706 Bacteria 18811
186 Ga0453684_0051972 3300044712 Bacteria 5364
187 Ga0453684_0076290 3300044712 Bacteria 4209
188 Ga0453684_0112753 3300044712 Bacteria 3300
189 Ga0466971_0002558 3300044719 Bacteria 7687
190 Ga0466970_0001214 3300044765 Bacteria 12483
191 Ga0466957_0030256 3300044842 Bacteria 3232
192 Ga0466957_0069846 3300044842 Bacteria 2170
193 Ga0466960_0006547 3300044901 Bacteria 4677
194 Ga0466959_0022224 3300045049 Bacteria 4686
195 Ga0451576_0018864 3300045051 Bacteria 7540
196 Ga0451576_0030468 3300045051 Bacteria 5766
197 Ga0451576_0046123 3300045051 Bacteria 4589
198 Ga0466958_0067179 3300045836 Bacteria 2190
199 Ga0466967_0167287 3300045976 Bacteria 2067
200 Ga0495629_0042535 3300046459 Bacteria 3192
201 Ga0495638_0000875 3300046460 Bacteria 31213
202 Ga0495580_0020921 3300046472 Bacteria 4833
203 Ga0495607_0014342 3300046501 Bacteria 5164
204 Ga0495628_0005506 3300046516 Bacteria 11082
205 Ga0495628_0109067 3300046516 Bacteria 2130
206 Ga0495654_0050108 3300046530 Bacteria 2042
207 Ga0495665_0079940 3300046531 Bacteria 1720
208 Ga0495645_0082637 3300046543 Bacteria 2303
209 Ga0495624_0022069 3300046690 Bacteria 4214
210 Ga0495670_0003016 3300046691 Bacteria 8305
211 Ga0495589_0002145 3300046794 Bacteria 11128
212 Ga0495674_0004487 3300047319 Bacteria 13435
213 Ga0495674_0073437 3300047319 Bacteria 2948
214 Ga0495672_0002522 3300047320 Bacteria 16718
215 Ga0495680_0047880 3300047322 Bacteria 3360
216 Ga0495686_0000540 3300047472 Bacteria 54110
217 Ga0496102_0025078 3300048905 Bacteria 5304
218 Ga0496102_0043110 3300048905 Bacteria 4090
219 Ga0496102_0052150 3300048905 Bacteria 3726
220 Ga0496104_0078298 3300048907 Bacteria 3150
221 Ga0496106_0014321 3300048909 Bacteria 5860
222 Ga0496112_0005672 3300048915 Bacteria 10846
223 Ga0496112_0211188 3300048915 Bacteria 1898
224 Ga0496116_0013599 3300048919 Bacteria 6547
225 Ga0496119_0008854 3300048922 Bacteria 8753
226 Ga0496120_0007034 3300048923 Bacteria 8456
227 Ga0496121_0000568 3300048924 Bacteria 69617
228 Ga0496123_0007518 3300048926 Bacteria 10223
229 Ga0496124_0037277 3300048927 Bacteria 4230
230 Ga0496124_0096765 3300048927 Bacteria 2398
231 Ga0496125_0017745 3300048928 Bacteria 6774
232 Ga0496126_0047193 3300048929 Bacteria 3944
233 Ga0501034_0041058 3300049571 Plasmid 4681
234 Ga0501034_0070792 3300049571 Bacteria 3498
235 Ga0501037_0034522 3300049573 Unclassified 3733
236 Ga0501044_0008474 3300049823 Bacteria 11268
237 nmdc:mga05p37_184033_c1 3300050507 Unclassified 2540
238 nmdc:mga05p37_229823_c1 3300050507 Bacteria 2236
239 nmdc:mga05p37_54326_c1 3300050507 Bacteria 4927
240 nmdc:mga05p37_84460_c1 3300050507 Bacteria 3912
241 nmdc:mga08y16_269332_c1 3300050511 Bacteria 1758
242 nmdc:mga0n895_40024_c1 3300050512 Bacteria 4553
243 nmdc:mga0n895_7298_c1 3300050512 Bacteria 9473
244 nmdc:mga08x19_1274_c1 3300050514 Bacteria 15640
245 nmdc:mga0a205_128733_c1 3300050515 Bacteria 2432
246 nmdc:mga0a205_175292_c1 3300050515 Bacteria 2040
247 nmdc:mga0a205_3320_c1 3300050515 Bacteria 14328
248 nmdc:mga0a205_76146_c1 3300050515 Bacteria 3242
249 Ga0495601_0025831 3300053077 Bacteria 3624
250 Ga0500637_0048519 3300053178 Bacteria 2415
251 Ga0466962_0005774 3300061719 Bacteria 5944
252 2511180567 2510917027 Bacteria 5287437
253 2596372304 2595698237 Bacteria 6712432
254 2687235225 2684623219 Bacteria 8442773
255 2829747577 2829745981 Bacteria 5406054
256 2857597911 2857591370 Bacteria 6569758
257 2889310919 2889306138 Bacteria 6358934
258 2902336738 2902330777 Bacteria 6395352
259 2902406164 2902405164 Bacteria 6784948
260 2915610822 2915606848 Bacteria 6032732
261 2928126837 2928125067 Bacteria 5937560
262 Ga0450889_001025
263 rootH1_10152905
264 Ga0070658_10051348
265 Ga0070676_10000970
266 Ga0070690_100001382
267 Ga0070670_100002280
268 Ga0068869_100002059
269 Ga0070680_100000805
270 Ga0068868_100060599
271 Ga0070660_100007941
272 Ga0070689_100056446
273 Ga0070691_10003272
274 Ga0070691_10006203
275 Ga0070687_100026892
276 Ga0070692_10000813
277 Ga0070669_100013427
278 Ga0070675_100227089
279 Ga0070673_100034370
280 Ga0070659_100003723
281 Ga0070667_100182713
282 Ga0070703_10001106
283 Ga0070709_10003082
284 Ga0070710_10004493
285 Ga0070711_100005908
286 Ga0070705_100001417
287 Ga0070694_100004333
288 Ga0070694_100010114
289 Ga0070708_100000129
290 Ga0070708_100055537
291 Ga0070708_100060019
292 Ga0070663_100006140
293 Ga0070681_10049088
294 Ga0068867_100002225
295 Ga0070706_100000156
296 Ga0070706_100007023
297 Ga0070706_100068848
298 Ga0070706_100088875
299 Ga0070707_100000078
300 Ga0070707_100005082
301 Ga0070707_100123779
302 Ga0070698_100001351
303 Ga0070698_100005918
304 Ga0070698_100046618
305 Ga0070698_100062372
306 Ga0070698_100070537
307 Ga0070698_100084457
308 Ga0070698_100209293
309 Ga0070699_100000019
310 Ga0070699_100000254
311 Ga0070699_100009543
312 Ga0070699_100028784
313 Ga0070699_100048554
314 Ga0070699_100144657
315 Ga0070679_100002406
316 Ga0070679_100053585
317 Ga0070679_100144811
318 Ga0070684_100034881
319 Ga0070697_100034205
320 Ga0070697_100034964
321 Ga0070697_100079576
322 Ga0068853_100012891
323 Ga0070695_100009241
324 Ga0070696_100000491
325 Ga0070693_100000296
326 Ga0070665_100165023
327 Ga0070704_100000946
328 Ga0070704_100080797
329 Ga0068855_100004037
330 Ga0068855_100017845
331 Ga0068854_100015588
332 Ga0068856_100004878
333 Ga0070702_100027883
334 Ga0068861_100037135
335 Ga0068863_100018561
336 Ga0068858_100015267
337 Ga0068858_100106962
338 Ga0068860_100005548
339 Ga0081540_1017303
340 Ga0070717_10000664
341 Ga0070717_10000684
342 Ga0070716_100000746
343 Ga0070712_100032579
344 Ga0075428_100086919
345 Ga0075433_10025712
346 Ga0075433_10060455
347 Ga0075433_10114715
348 Ga0075434_100093537
349 Ga0075435_100020467
350 Ga0099794_10021572
351 Ga0114129_10014289
352 Ga0114129_10014662
353 Ga0114129_10070715
354 Ga0114129_10124031
355 Ga0114129_10174551
356 Ga0105241_10001307
357 Ga0105248_10026416
358 Ga0105237_10006005
359 Ga0105238_10123396
360 Ga0157373_10006147
361 Ga0157371_10041968
362 Ga0163162_10000877
363 Ga0157372_10000318
364 Ga0206356_10101677
365 Ga0213872_10011420
366 Ga0213876_10001620
367 Ga0213875_10000498
368 Ga0209050_1001211
369 Ga0209050_1001866
370 Ga0207653_10000690
371 Ga0207688_10040152
372 Ga0207647_10091865
373 Ga0207645_10000318
374 Ga0207643_10000742
375 Ga0207684_10000227
376 Ga0207684_10009154
377 Ga0207684_10097721
378 Ga0207707_10004090
379 Ga0207707_10022187
380 Ga0207671_10015631
381 Ga0207693_10023953
382 Ga0207693_10053409
383 Ga0207663_10070078
384 Ga0207660_10000147
385 Ga0207662_10031081
386 Ga0207657_10000368
387 Ga0207657_10014143
388 Ga0207649_10004244
389 Ga0207652_10011723
390 Ga0207646_10000040
391 Ga0207646_10000179
392 Ga0207646_10005965
393 Ga0207646_10007346
394 Ga0207646_10029930
395 Ga0207646_10063063
396 Ga0207650_10012699
397 Ga0207659_10127278
398 Ga0207664_10061466
399 Ga0207690_10149053
400 Ga0207706_10000345
401 Ga0207670_10054528
402 Ga0207665_10000424
403 Ga0207689_10000934
404 Ga0207679_10007506
405 Ga0207667_10005563
406 Ga0207667_10016333
407 Ga0207667_10029362
408 Ga0207651_10100271
409 Ga0207640_10015836
410 Ga0207658_10016185
411 Ga0207658_10160074
412 Ga0207677_10027806
413 Ga0207703_10003856
414 Ga0207703_10072512
415 Ga0207639_10053624
416 Ga0207678_10002648
417 Ga0207702_10023399
418 Ga0207648_10000438
419 Ga0207674_10002470
420 Ga0268266_10332601
421 Ga0268264_10006830
422 Ga0307515_10022872
423 Ga0307509_10034661
424 Ga0307509_10077078
425 Ga0307409_100126621
426 Ga0373949_0000104
427 Ga0373949_0009247
428 Ga0373923_0054169
429 Ga0373941_0004844
430 Ga0373954_0005134
431 Ga0373956_0018956
432 Ga0373933_0001940
433 Ga0373937_0405876
434 Ga0436364_0726974
435 Ga0436364_0805523
436 Ga0436365_0158958
437 Ga0436365_0905050
438 Ga0436361_0267920
439 Ga0436361_0356024
440 Ga0439448_0021943
441 Ga0451577_0008181
442 Ga0451577_0122118
443 Ga0466969_0006252
444 Ga0466966_0001867
445 Ga0466961_0028287
446 Ga0466964_0000151
447 Ga0453684_0051972
448 Ga0453684_0076290
449 Ga0453684_0112753
450 Ga0466971_0002558
451 Ga0466970_0001214
452 Ga0466957_0030256
453 Ga0466957_0069846
454 Ga0466960_0006547
455 Ga0466959_0022224
456 Ga0451576_0018864
457 Ga0451576_0030468
458 Ga0451576_0046123
459 Ga0466958_0067179
460 Ga0466967_0167287
461 Ga0495629_0042535
462 Ga0495638_0000875
463 Ga0495580_0020921
464 Ga0495607_0014342
465 Ga0495628_0005506
466 Ga0495628_0109067
467 Ga0495654_0050108
468 Ga0495665_0079940
469 Ga0495645_0082637
470 Ga0495624_0022069
471 Ga0495670_0003016
472 Ga0495589_0002145
473 Ga0495674_0004487
474 Ga0495674_0073437
475 Ga0495672_0002522
476 Ga0495680_0047880
477 Ga0495686_0000540
478 Ga0496102_0025078
479 Ga0496102_0043110
480 Ga0496102_0052150
481 Ga0496104_0078298
482 Ga0496106_0014321
483 Ga0496112_0005672
484 Ga0496112_0211188
485 Ga0496116_0013599
486 Ga0496119_0008854
487 Ga0496120_0007034
488 Ga0496121_0000568
489 Ga0496123_0007518
490 Ga0496124_0037277
491 Ga0496124_0096765
492 Ga0496125_0017745
493 Ga0496126_0047193
494 Ga0501034_0041058
495 Ga0501034_0070792
496 Ga0501037_0034522
497 Ga0501044_0008474
498 nmdc:mga05p37_184033_c1
499 nmdc:mga05p37_229823_c1
500 nmdc:mga05p37_54326_c1
501 nmdc:mga05p37_84460_c1
502 nmdc:mga08y16_269332_c1
503 nmdc:mga0n895_40024_c1
504 nmdc:mga0n895_7298_c1
505 nmdc:mga08x19_1274_c1
506 nmdc:mga0a205_128733_c1
507 nmdc:mga0a205_175292_c1
508 nmdc:mga0a205_3320_c1
509 nmdc:mga0a205_76146_c1
510 Ga0495601_0025831
511 Ga0500637_0048519
512 Ga0466962_0005774
513 2511180567
514 2596372304
515 2687235225
516 2829747577
517 2857597911
518 2889310919
519 2902336738
520 2902406164
521 2915610822
522 2928126837

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

21

377

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.8811 17 412
7da5-assembly1.cif.gz_A cryo-em structure of the human mct1 d309n mutant in complex with basigin-2 in the inward-open conformation. 0.8578 15 414
8ex6-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1*) 0.8421 15 413
6kkl-assembly1.cif.gz_A crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward conformation (h115n mutant) 0.8392 15 415
7yr5-assembly1.cif.gz_A embigin facilitates monocarboxylate transporter 1 localization to plasma membrane and transition to a decoupling state 0.836 17 412
ID Description Score Start End Superfamily
af_P09836_19_223_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9322 9 203 1.20.1250.20
af_P39398_32_230_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9279 5 197 1.20.1250.20
af_Q5RGT2_295_489_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9183 235 415 1.20.1250.20
af_A0A0R0F726_79_268_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9165 15 200 1.20.1250.20
af_A0A0R4IK09_14_317_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9165 16 195 1.20.1250.20
ID Description Score Start End GO Terms
AF-F0SXV2-F1-model_v4 Major facilitator superfamily MFS_1 0.9878 15 417 GO:0005886
GO:0022857
AF-A0A348AF54-F1-model_v4 Major Facilitator Superfamily protein 0.9853 15 418 GO:0005886
GO:0022857
AF-A0A0S6UQW9-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.9781 19 418 GO:0016020
GO:0022857
AF-A0A252C0W0-F1-model_v4 MFS transporter 0.9781 22 419 GO:0016020
GO:0022857
AF-A0A2R5FIA6-F1-model_v4 Major facilitator transporter 0.9716 2 421 GO:0016020
GO:0022857

Map